Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1063390 | XP_013449161.1 | 95.568 | 361 | 1 | 1 | 64 | 409 | 1 | 361 | 0.0 | 713 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1063390 | sp|Q96329|ACOX4_ARATH | 80.737 | 353 | 52 | 2 | 78 | 414 | 19 | 371 | 0.0 | 604 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1063390 | A0A072U1Y7 | 95.568 | 361 | 1 | 1 | 64 | 409 | 1 | 361 | 0.0 | 713 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0639110 | Msa1063390 | 0.807964 | 3.907324e-50 | -8.615850e-47 |
| Msa0838470 | Msa1063390 | 0.810307 | 1.230250e-50 | -8.615850e-47 |
| Msa1024710 | Msa1063390 | 0.803094 | 4.107226e-49 | -8.615850e-47 |
| Msa1063390 | Msa1108750 | 0.893626 | 5.274155e-75 | -8.615850e-47 |
| Msa0560460 | Msa1063390 | 0.803173 | 3.954884e-49 | -8.615850e-47 |
| Msa0562210 | Msa1063390 | 0.802049 | 6.746995e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1063390 | MtrunA17_Chr7g0242641 | 99.652 | 287 | 1 | 0 | 123 | 409 | 1 | 287 | 0.0 | 597 |
| Msa1063390 | MtrunA17_Chr7g0242631 | 92.537 | 67 | 5 | 0 | 64 | 130 | 1 | 67 | 2.89e-37 | 132 |
| Msa1063390 | MtrunA17_Chr4g0029681 | 31.148 | 244 | 162 | 3 | 164 | 402 | 107 | 349 | 6.53e-36 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1063390 | AT3G51840.1 | 80.737 | 353 | 52 | 2 | 78 | 414 | 19 | 371 | 0.0 | 604 |
| Msa1063390 | AT3G45300.1 | 30.488 | 246 | 161 | 3 | 164 | 402 | 99 | 341 | 1.07e-33 | 130 |
Find 101 sgRNAs with CRISPR-Local
Find 465 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTCAACAAATCAAATAAA+TGG | 0.162779 | 7_2:-55280840 | Msa1063390:CDS |
| CAAGTTTCTGTTGGTTGATT+TGG | 0.189805 | 7_2:+55279052 | None:intergenic |
| CAAATTGTTTCCTCTCCTTT+AGG | 0.236337 | 7_2:+55279094 | None:intergenic |
| TGTCCTGGTCTTTCCGTAAC+TGG | 0.238338 | 7_2:-55281477 | Msa1063390:CDS |
| TGTTTCCTATCCACCGCTTT+TGG | 0.303153 | 7_2:+55280901 | None:intergenic |
| AAGTTGTTCAACTTTCATTT+TGG | 0.313392 | 7_2:-55281415 | Msa1063390:CDS |
| GTTGTCAAAGTTCTTCGATA+TGG | 0.319971 | 7_2:-55286310 | Msa1063390:CDS |
| TATTCCAAAGCTTGGTGAAC+TGG | 0.343760 | 7_2:-55281616 | Msa1063390:CDS |
| ATCCTAATGGCCTGCTCCTC+CGG | 0.344421 | 7_2:+55282186 | None:intergenic |
| GGACTTCGAATCGTACAAAA+TGG | 0.361890 | 7_2:-55280087 | Msa1063390:CDS |
| CCTTCTATTCTGTCCTCATC+AGG | 0.363681 | 7_2:+55280036 | None:intergenic |
| GTGATTGATTCTCAGGGTTA+TGG | 0.374156 | 7_2:-55281501 | Msa1063390:intron |
| AGCTTTGGAATAGCATGAAA+TGG | 0.380127 | 7_2:+55281627 | None:intergenic |
| CTCTCTCACTTTCATCCTAA+TGG | 0.383281 | 7_2:+55282173 | None:intergenic |
| TGATGGGAAGAAGAAGAAAA+TGG | 0.383375 | 7_2:+55284039 | None:intergenic |
| CTTGGTGAACTGGGTATTGC+TGG | 0.383548 | 7_2:-55281606 | Msa1063390:CDS |
| CTAAAGGAGAGGAAACAATT+TGG | 0.400638 | 7_2:-55279093 | Msa1063390:CDS |
| CAGTACGTTTGCTGATTTGT+TGG | 0.403155 | 7_2:-55280880 | Msa1063390:CDS |
| TCTCAGGGTTATGGTTGTCC+TGG | 0.404078 | 7_2:-55281492 | Msa1063390:intron |
| CCTGATGAGGACAGAATAGA+AGG | 0.422263 | 7_2:-55280036 | Msa1063390:CDS |
| GCCTTGACTGAACCTGACTA+TGG | 0.430881 | 7_2:-55281114 | Msa1063390:CDS |
| CGATTGGGTTGGTTTGTGTT+GGG | 0.433509 | 7_2:+55283999 | None:intergenic |
| GCAACCTATTGGTATATCAA+TGG | 0.437177 | 7_2:-55279396 | Msa1063390:CDS |
| ATACCCAGTTCACCAAGCTT+TGG | 0.439876 | 7_2:+55281612 | None:intergenic |
| GCGATTGGGTTGGTTTGTGT+TGG | 0.441265 | 7_2:+55283998 | None:intergenic |
| GAAGGTGGTTGGATCCTTGA+GGG | 0.453581 | 7_2:-55280924 | Msa1063390:CDS |
| ATTCGATGACTTGTTGAAAC+CGG | 0.454041 | 7_2:-55282205 | Msa1063390:CDS |
| ATGCCCATTGATATACCAAT+AGG | 0.454299 | 7_2:+55279392 | None:intergenic |
| TTTGACAACAATAGTTTCCA+TGG | 0.459476 | 7_2:+55286324 | None:intergenic |
| CAACCTATTGGTATATCAAT+GGG | 0.463504 | 7_2:-55279395 | Msa1063390:CDS |
| TTTGAAGACCACAGCAACTA+AGG | 0.463606 | 7_2:-55281076 | Msa1063390:intron |
| TTGATTTGGAAAGCTGCTAA+TGG | 0.465853 | 7_2:+55279066 | None:intergenic |
| GTTCAAGCGATGATTCTTGT+TGG | 0.466273 | 7_2:-55279012 | Msa1063390:CDS |
| CCCATTTATTTGATTTGTTG+AGG | 0.467948 | 7_2:+55280839 | None:intergenic |
| TTTCATGCTATTCCAAAGCT+TGG | 0.468013 | 7_2:-55281624 | Msa1063390:CDS |
| ATGGTTGCTTGGCAACCTAT+TGG | 0.472285 | 7_2:-55279407 | Msa1063390:CDS |
| ACCCCGGGTCATGCTAGCTT+GGG | 0.475227 | 7_2:-55278952 | Msa1063390:CDS |
| CTTGCATCACTTCCATAGTC+AGG | 0.476058 | 7_2:+55281102 | None:intergenic |
| TCCTTGGCAATGCTCACTAT+AGG | 0.476560 | 7_2:-55281384 | Msa1063390:intron |
| AAGCGATGATTCTTGTTGGT+TGG | 0.476633 | 7_2:-55279008 | Msa1063390:CDS |
| CCTCAACAAATCAAATAAAT+GGG | 0.478793 | 7_2:-55280839 | Msa1063390:intron |
| CTTGTTGAAACCGGAGGAGC+AGG | 0.479717 | 7_2:-55282196 | Msa1063390:CDS |
| AGCAATAGCACTTCCAGTTA+CGG | 0.487875 | 7_2:+55281464 | None:intergenic |
| AACCGGAGGAGCAGGCCATT+AGG | 0.489646 | 7_2:-55282188 | Msa1063390:CDS |
| TTTCGCGTGTGATGGTTGCT+TGG | 0.491652 | 7_2:-55279418 | Msa1063390:CDS |
| GAGAGAGATACCTTGTGGAT+TGG | 0.493364 | 7_2:+55283916 | None:intergenic |
| ATAGTTAATAAAACCTCAAA+CGG | 0.497082 | 7_2:-55286268 | Msa1063390:intron |
| TGAGCATTGCCAAGGATGAA+TGG | 0.497287 | 7_2:+55281391 | None:intergenic |
| TAAATATTGTTGTCAAATAG+AGG | 0.498041 | 7_2:-55278914 | Msa1063390:CDS |
| GGAAGGTGAAATGAAGCGAT+TGG | 0.507489 | 7_2:+55283983 | None:intergenic |
| GCTTTGGAATAGCATGAAAT+GGG | 0.508951 | 7_2:+55281628 | None:intergenic |
| AAGATGGTATCTACCGTTTG+AGG | 0.512652 | 7_2:+55286255 | None:intergenic |
| GGAAGGTGGTTGGATCCTTG+AGG | 0.517870 | 7_2:-55280925 | Msa1063390:CDS |
| AAGTGTGAAAATGTTGATGA+TGG | 0.528364 | 7_2:+55284022 | None:intergenic |
| CTATGCAAGTTGTATGAAAG+TGG | 0.528544 | 7_2:-55278982 | Msa1063390:CDS |
| ACTTGCTGTTTCGCGTGTGA+TGG | 0.529840 | 7_2:-55279426 | Msa1063390:CDS |
| TATATTCTGACAGATAAGAA+TGG | 0.532779 | 7_2:-55283744 | Msa1063390:intron |
| CAAGGAGGAAAAGTGGATGC+TGG | 0.534250 | 7_2:+55283657 | None:intergenic |
| TTTCCCAAGCTAGCATGACC+CGG | 0.534822 | 7_2:+55278949 | None:intergenic |
| GAAGGTGAAATGAAGCGATT+GGG | 0.536375 | 7_2:+55283984 | None:intergenic |
| ATTCCAAAGCTTGGTGAACT+GGG | 0.540117 | 7_2:-55281615 | Msa1063390:CDS |
| GGTGGCAAATCAAAATATGA+AGG | 0.541043 | 7_2:+55283714 | None:intergenic |
| GAGGGCCAAAAGCGGTGGAT+AGG | 0.551086 | 7_2:-55280906 | Msa1063390:CDS |
| CTTTGTAAATATCAGGTGGA+AGG | 0.551566 | 7_2:-55280942 | Msa1063390:intron |
| TATTGCTGGTGGTACAATCA+AGG | 0.554972 | 7_2:-55281592 | Msa1063390:intron |
| AATATCAGGTGGAAGGTGGT+TGG | 0.556736 | 7_2:-55280935 | Msa1063390:intron |
| TGTGATTTAAAGGTACCTAA+AGG | 0.564117 | 7_2:-55279109 | Msa1063390:intron |
| GTGAAATGAAGCGATTGGGT+TGG | 0.566567 | 7_2:+55283988 | None:intergenic |
| AAAATGGAGACATTGTTATG+AGG | 0.575180 | 7_2:-55280071 | Msa1063390:CDS |
| TTCCCAAGCTAGCATGACCC+GGG | 0.576198 | 7_2:+55278950 | None:intergenic |
| GCATCTATGATATGTGTCAC+AGG | 0.578609 | 7_2:-55279373 | Msa1063390:intron |
| TGTAAATATCAGGTGGAAGG+TGG | 0.582236 | 7_2:-55280939 | Msa1063390:intron |
| ATTTGTTGGTTATCTTCGCA+AGG | 0.585691 | 7_2:-55280866 | Msa1063390:CDS |
| GCATTTGAACAAGTTTCTGT+TGG | 0.588644 | 7_2:+55279043 | None:intergenic |
| GTTACCACAAGGAGGAAAAG+TGG | 0.591085 | 7_2:+55283650 | None:intergenic |
| ACCTATAGTGAGCATTGCCA+AGG | 0.591220 | 7_2:+55281383 | None:intergenic |
| CCACAAAGTATAGCATTGTG+TGG | 0.603070 | 7_2:-55281283 | Msa1063390:intron |
| TCCTTGAGGGCCAAAAGCGG+TGG | 0.605182 | 7_2:-55280911 | Msa1063390:CDS |
| GAAAGTGGTAAAATGACCCC+GGG | 0.606752 | 7_2:-55278967 | Msa1063390:CDS |
| TGAAAGTGGTAAAATGACCC+CGG | 0.608059 | 7_2:-55278968 | Msa1063390:CDS |
| CGATGACTTGTTGAAACCGG+AGG | 0.608202 | 7_2:-55282202 | Msa1063390:CDS |
| GGGTCATGCTAGCTTGGGAA+AGG | 0.608692 | 7_2:-55278947 | Msa1063390:CDS |
| CTTCTATTCTGTCCTCATCA+GGG | 0.610735 | 7_2:+55280037 | None:intergenic |
| TCCATAGTCAGGTTCAGTCA+AGG | 0.611700 | 7_2:+55281113 | None:intergenic |
| TCACTGAACCTTAGTTGCTG+TGG | 0.618180 | 7_2:+55281068 | None:intergenic |
| TTGTGGATTGGAACGAGTCA+TGG | 0.618797 | 7_2:+55283928 | None:intergenic |
| GCAAAAGTATCTACCGTCGT+TGG | 0.625186 | 7_2:-55281245 | Msa1063390:CDS |
| AGTGTGAAAATGTTGATGAT+GGG | 0.625650 | 7_2:+55284023 | None:intergenic |
| CTTCCAGTTACGGAAAGACC+AGG | 0.628064 | 7_2:+55281474 | None:intergenic |
| GGTGAACTGGGTATTGCTGG+TGG | 0.643007 | 7_2:-55281603 | Msa1063390:CDS |
| ATTGGAACGAGTCATGGTGG+TGG | 0.649515 | 7_2:+55283934 | None:intergenic |
| TTTAAAGGTACCTAAAGGAG+AGG | 0.649674 | 7_2:-55279104 | Msa1063390:intron |
| GCAAGAGAAACATCAAGTGG+TGG | 0.653933 | 7_2:+55283696 | None:intergenic |
| CACAAAGTATAGCATTGTGT+GGG | 0.656597 | 7_2:-55281282 | Msa1063390:intron |
| GTGGATGCTGGAGTTGCTTG+AGG | 0.664939 | 7_2:+55283669 | None:intergenic |
| GGATCCTTGAGGGCCAAAAG+CGG | 0.668490 | 7_2:-55280914 | Msa1063390:CDS |
| TCCCAAGCTAGCATGACCCG+GGG | 0.686858 | 7_2:+55278951 | None:intergenic |
| AATGCAAGAGAAACATCAAG+TGG | 0.699349 | 7_2:+55283693 | None:intergenic |
| TCAAGGTTGTTACCACAAGG+AGG | 0.702815 | 7_2:+55283642 | None:intergenic |
| ATGACTCGTTCCAATCCACA+AGG | 0.715801 | 7_2:-55283926 | Msa1063390:intron |
| TGGATTGGAACGAGTCATGG+TGG | 0.726458 | 7_2:+55283931 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTATTATAATCTTTTAAAAT+TGG | + | chr7_2:55279269-55279288 | None:intergenic | 10.0% |
| !!! | TAAGTTGATAAATAAAATAT+TGG | + | chr7_2:55279378-55279397 | None:intergenic | 10.0% |
| !!! | CAACTTAATTTTTAATTAAA+AGG | - | chr7_2:55279391-55279410 | Msa1063390:CDS | 10.0% |
| !! | TAATAATTTGAACATAAATT+TGG | - | chr7_2:55280180-55280199 | Msa1063390:intron | 10.0% |
| !! | TGTAAAATGATATATAATTT+GGG | + | chr7_2:55280347-55280366 | None:intergenic | 10.0% |
| !! | TTGTAAAATGATATATAATT+TGG | + | chr7_2:55280348-55280367 | None:intergenic | 10.0% |
| !! | TAAAGAAATTAAATAGTAAA+GGG | + | chr7_2:55280407-55280426 | None:intergenic | 10.0% |
| !! | ATAAAGAAATTAAATAGTAA+AGG | + | chr7_2:55280408-55280427 | None:intergenic | 10.0% |
| !!! | ATCTTTTTTTTTTTTTTGAA+GGG | + | chr7_2:55281654-55281673 | None:intergenic | 10.0% |
| !!! | TATCTTTTTTTTTTTTTTGA+AGG | + | chr7_2:55281655-55281674 | None:intergenic | 10.0% |
| !! | AAATGATGTAATAAATAAAA+GGG | + | chr7_2:55282168-55282187 | None:intergenic | 10.0% |
| !! | AAAATGATGTAATAAATAAA+AGG | + | chr7_2:55282169-55282188 | None:intergenic | 10.0% |
| !!! | TTATATATAAGTGTTATTTT+TGG | - | chr7_2:55282358-55282377 | Msa1063390:intron | 10.0% |
| !! | AATATTTATCTTTGTTAAAA+TGG | - | chr7_2:55283862-55283881 | Msa1063390:intron | 10.0% |
| !! | TTTATTATTCGAAATTGATT+GGG | + | chr7_2:55279442-55279461 | None:intergenic | 15.0% |
| !!! | TTTTATTATTCGAAATTGAT+TGG | + | chr7_2:55279443-55279462 | None:intergenic | 15.0% |
| !! | AATCAATTTCGAATAATAAA+AGG | - | chr7_2:55279442-55279461 | Msa1063390:intron | 15.0% |
| !! | TATGTATAGTTTATAAACTT+GGG | + | chr7_2:55279607-55279626 | None:intergenic | 15.0% |
| !!! | TGTATTTTTGTTTCTTTTTT+TGG | + | chr7_2:55280068-55280087 | None:intergenic | 15.0% |
| !! | GTAAAATGATATATAATTTG+GGG | + | chr7_2:55280346-55280365 | None:intergenic | 15.0% |
| !! | TAATAAATAATAACACAGTT+TGG | - | chr7_2:55280878-55280897 | Msa1063390:CDS | 15.0% |
| !! | AAATTAATACATTTATGACA+AGG | + | chr7_2:55281116-55281135 | None:intergenic | 15.0% |
| !!! | TAATTTTATGATTTATGATG+TGG | - | chr7_2:55281130-55281149 | Msa1063390:intron | 15.0% |
| !! | GAATGAAAATAATTAAATCA+AGG | + | chr7_2:55281600-55281619 | None:intergenic | 15.0% |
| !!! | TATTTTTCAATTAAGATTAC+AGG | + | chr7_2:55281944-55281963 | None:intergenic | 15.0% |
| !!! | TTATATACATCATTTTTAAG+AGG | - | chr7_2:55281975-55281994 | Msa1063390:intron | 15.0% |
| !!! | TATATACATCATTTTTAAGA+GGG | - | chr7_2:55281976-55281995 | Msa1063390:intron | 15.0% |
| !!! | TTTTAAAAAGCAAAAAGAAA+AGG | + | chr7_2:55283118-55283137 | None:intergenic | 15.0% |
| !!! | CAAATTTTTATATTTACTAG+TGG | + | chr7_2:55283171-55283190 | None:intergenic | 15.0% |
| !!! | TTGTATATACATAAGTTTTT+GGG | - | chr7_2:55283275-55283294 | Msa1063390:intron | 15.0% |
| !! | ACATATATAAATATACAATC+AGG | + | chr7_2:55283334-55283353 | None:intergenic | 15.0% |
| !! | ATCAAAGATAATAAAATATC+AGG | + | chr7_2:55283916-55283935 | None:intergenic | 15.0% |
| !! | TGTACTAATAATGAATAAAA+TGG | - | chr7_2:55284782-55284801 | Msa1063390:intron | 15.0% |
| !! | AAAAAAATCTAGTATTCTAA+GGG | + | chr7_2:55284950-55284969 | None:intergenic | 15.0% |
| !! | AAACATTTGTCATTAAATAA+AGG | - | chr7_2:55286035-55286054 | Msa1063390:intron | 15.0% |
| !! | ATAGTTAATAAAACCTCAAA+CGG | - | chr7_2:55278954-55278973 | Msa1063390:CDS | 20.0% |
| !! | CTATGTATAGTTTATAAACT+TGG | + | chr7_2:55279608-55279627 | None:intergenic | 20.0% |
| !! | TCATAACAAATAACAGATAA+AGG | - | chr7_2:55279820-55279839 | Msa1063390:intron | 20.0% |
| !!! | ATATTTTCCATAAGTATGTT+TGG | + | chr7_2:55280207-55280226 | None:intergenic | 20.0% |
| !! | AGATACAATTAGTAATAAGT+AGG | - | chr7_2:55280624-55280643 | Msa1063390:intron | 20.0% |
| !! | GATACAATTAGTAATAAGTA+GGG | - | chr7_2:55280625-55280644 | Msa1063390:intron | 20.0% |
| !!! | AATTTTAGTGATTTCATGTA+AGG | - | chr7_2:55280677-55280696 | Msa1063390:intron | 20.0% |
| !!! | AATTAACCTCTTTTTAGTTT+TGG | - | chr7_2:55280803-55280822 | Msa1063390:intron | 20.0% |
| !!! | ATTAACCTCTTTTTAGTTTT+GGG | - | chr7_2:55280804-55280823 | Msa1063390:intron | 20.0% |
| !! | AAAAAAAAACAAAAGATCAC+AGG | + | chr7_2:55281397-55281416 | None:intergenic | 20.0% |
| !! | AATATACGAAATCAAAACTT+TGG | + | chr7_2:55281464-55281483 | None:intergenic | 20.0% |
| !! | TAGATGTACAGAATATTAAT+AGG | + | chr7_2:55281721-55281740 | None:intergenic | 20.0% |
| !! | TATTAATATTCTGTACATCT+AGG | - | chr7_2:55281720-55281739 | Msa1063390:intron | 20.0% |
| !! | ATGAGTAAATAACAGTTAAT+GGG | + | chr7_2:55281870-55281889 | None:intergenic | 20.0% |
| !!! | ATATACATCATTTTTAAGAG+GGG | - | chr7_2:55281977-55281996 | Msa1063390:intron | 20.0% |
| !!! | CTAAATGAAGCTTTAATTTT+CGG | + | chr7_2:55282793-55282812 | None:intergenic | 20.0% |
| !! | TTCAATGTAAATATCTTTGT+TGG | - | chr7_2:55283141-55283160 | Msa1063390:intron | 20.0% |
| !!! | ATTTTTATATTTACTAGTGG+AGG | + | chr7_2:55283168-55283187 | None:intergenic | 20.0% |
| !! | TGTTTCAAAAAATATCTGTT+TGG | - | chr7_2:55283189-55283208 | Msa1063390:intron | 20.0% |
| !! | AAACTTATGTATATACAACT+TGG | + | chr7_2:55283273-55283292 | None:intergenic | 20.0% |
| !!! | GTTGTATATACATAAGTTTT+TGG | - | chr7_2:55283274-55283293 | Msa1063390:intron | 20.0% |
| !! | TCAATTTGATTACATCAAAT+TGG | + | chr7_2:55283378-55283397 | None:intergenic | 20.0% |
| !! | ATGTAATCAAATTGAAATGA+TGG | - | chr7_2:55283383-55283402 | Msa1063390:intron | 20.0% |
| !! | TGTAATCAAATTGAAATGAT+GGG | - | chr7_2:55283384-55283403 | Msa1063390:intron | 20.0% |
| !! | GTTTCTAATCTATTCATTAT+TGG | - | chr7_2:55283409-55283428 | Msa1063390:intron | 20.0% |
| !!! | TTTTTGATGTTTGTATCTTT+TGG | - | chr7_2:55283459-55283478 | Msa1063390:intron | 20.0% |
| !! | TTGATTAGGACAAAATATAA+GGG | + | chr7_2:55283670-55283689 | None:intergenic | 20.0% |
| !! | ATAAGTCAAAAAGAATTGAA+TGG | + | chr7_2:55284190-55284209 | None:intergenic | 20.0% |
| !!! | GTTATTTTTTACCAAATCTA+TGG | - | chr7_2:55284614-55284633 | Msa1063390:intron | 20.0% |
| !!! | AACAAATCATGAAACATTTT+AGG | - | chr7_2:55284723-55284742 | Msa1063390:intron | 20.0% |
| !! | CAAAAAAATCTAGTATTCTA+AGG | + | chr7_2:55284951-55284970 | None:intergenic | 20.0% |
| !! | TTTCAGTTATATCGTAAAAA+AGG | - | chr7_2:55285071-55285090 | Msa1063390:intron | 20.0% |
| !! | ACAAAAATAGAGAACAAAAT+TGG | - | chr7_2:55285114-55285133 | Msa1063390:intron | 20.0% |
| !!! | GGTTTTTAAAACATTGTATT+TGG | + | chr7_2:55285886-55285905 | None:intergenic | 20.0% |
| !! | TAAATATTGTTGTCAAATAG+AGG | - | chr7_2:55286308-55286327 | Msa1063390:CDS | 20.0% |
| !! | TTTTTATGAGATAGCAAAGT+GGG | + | chr7_2:55279153-55279172 | None:intergenic | 25.0% |
| ! | TGAAAAGTCGTAAAATGTTT+AGG | + | chr7_2:55279325-55279344 | None:intergenic | 25.0% |
| !!! | GATCGAGATATTTTGAAAAA+AGG | + | chr7_2:55279474-55279493 | None:intergenic | 25.0% |
| !!! | TATTTTAACTTTGGTCTGAA+AGG | + | chr7_2:55279547-55279566 | None:intergenic | 25.0% |
| !!! | GTGCATTTGTATTTTAACTT+TGG | + | chr7_2:55279556-55279575 | None:intergenic | 25.0% |
| !! | GTATTGGGTTTTCATAAATT+AGG | + | chr7_2:55279671-55279690 | None:intergenic | 25.0% |
| ! | TATGAAAACCCAATACAAAA+TGG | - | chr7_2:55279675-55279694 | Msa1063390:intron | 25.0% |
| ! | AAATTGTTATGATTGTGTGA+TGG | + | chr7_2:55279756-55279775 | None:intergenic | 25.0% |
| ! | TGAACGATATTACATTTAGT+TGG | + | chr7_2:55280111-55280130 | None:intergenic | 25.0% |
| ! | GTATCATTTACTATAGTCAA+AGG | + | chr7_2:55280284-55280303 | None:intergenic | 25.0% |
| ! | TGTTAGAATGACATTTAAAG+CGG | + | chr7_2:55280312-55280331 | None:intergenic | 25.0% |
| ! | ATTTCTCATACGATTAATGA+AGG | - | chr7_2:55280452-55280471 | Msa1063390:intron | 25.0% |
| ! | CAATCATGTTCTTAAAGAAA+TGG | + | chr7_2:55280596-55280615 | None:intergenic | 25.0% |
| ! | TGAATGAGATGAGAAAAATT+AGG | - | chr7_2:55280730-55280749 | Msa1063390:intron | 25.0% |
| ! | GAATGAGATGAGAAAAATTA+GGG | - | chr7_2:55280731-55280750 | Msa1063390:intron | 25.0% |
| ! | ACATTCGAATTGGATAAAAA+TGG | + | chr7_2:55280996-55281015 | None:intergenic | 25.0% |
| ! | ATAAATTCACACATTCGAAT+TGG | + | chr7_2:55281006-55281025 | None:intergenic | 25.0% |
| ! | TCGAATGTGTGAATTTATAT+CGG | - | chr7_2:55281008-55281027 | Msa1063390:intron | 25.0% |
| !!! | TGTATTTTCGCTTTATTACT+GGG | + | chr7_2:55281064-55281083 | None:intergenic | 25.0% |
| !!! | TTGTATTTTCGCTTTATTAC+TGG | + | chr7_2:55281065-55281084 | None:intergenic | 25.0% |
| ! | TATATTCTGACAGATAAGAA+TGG | - | chr7_2:55281478-55281497 | Msa1063390:CDS | 25.0% |
| ! | TAATAGGCTGGAAATTAAAT+TGG | + | chr7_2:55281705-55281724 | None:intergenic | 25.0% |
| ! | CATGAGTAAATAACAGTTAA+TGG | + | chr7_2:55281871-55281890 | None:intergenic | 25.0% |
| ! | TTGAATGAATTTGTAGTGTT+TGG | + | chr7_2:55282235-55282254 | None:intergenic | 25.0% |
| !! | TTTTATAAGCGAACTTATAG+CGG | + | chr7_2:55282274-55282293 | None:intergenic | 25.0% |
| !! | TTTGCTATAAATGCTTAGTT+AGG | + | chr7_2:55282321-55282340 | None:intergenic | 25.0% |
| ! | TATACATAAACCAAGCAATT+GGG | + | chr7_2:55282540-55282559 | None:intergenic | 25.0% |
| ! | ATCTTATTATGTGCTTAACT+TGG | - | chr7_2:55282896-55282915 | Msa1063390:intron | 25.0% |
| ! | TTTGTATTTGTGATGATTGT+TGG | - | chr7_2:55282969-55282988 | Msa1063390:intron | 25.0% |
| ! | GTAATCAAATTGAAATGATG+GGG | - | chr7_2:55283385-55283404 | Msa1063390:intron | 25.0% |
| ! | TAATCAAATTGAAATGATGG+GGG | - | chr7_2:55283386-55283405 | Msa1063390:intron | 25.0% |
| !!! | TCATGCTTTTTAACAGTATT+GGG | - | chr7_2:55283558-55283577 | Msa1063390:intron | 25.0% |
| ! | CTTGATTAGGACAAAATATA+AGG | + | chr7_2:55283671-55283690 | None:intergenic | 25.0% |
| !! | AAGTTGTTCAACTTTCATTT+TGG | - | chr7_2:55283807-55283826 | Msa1063390:intron | 25.0% |
| ! | ACCTCAACAAATCAAATAAA+TGG | - | chr7_2:55284382-55284401 | Msa1063390:intron | 25.0% |
| ! | CCTCAACAAATCAAATAAAT+GGG | - | chr7_2:55284383-55284402 | Msa1063390:intron | 25.0% |
| ! | TATAAGGATTTAACAATGAC+AGG | + | chr7_2:55284432-55284451 | None:intergenic | 25.0% |
| ! | TATGGGCATGTTTATATATA+AGG | + | chr7_2:55284448-55284467 | None:intergenic | 25.0% |
| !!! | GCTCATTCTATGTTTTTTTT+GGG | + | chr7_2:55284561-55284580 | None:intergenic | 25.0% |
| ! | TCATATTAACGAATATAGCT+TGG | - | chr7_2:55284697-55284716 | Msa1063390:intron | 25.0% |
| ! | CATATTAACGAATATAGCTT+GGG | - | chr7_2:55284698-55284717 | Msa1063390:intron | 25.0% |
| ! | GTGATTATTTGAATAATCAG+CGG | + | chr7_2:55285269-55285288 | None:intergenic | 25.0% |
| ! | GGAGAGAAGAAAAAAATATT+AGG | + | chr7_2:55285633-55285652 | None:intergenic | 25.0% |
| ! | TGGAAATTAGATACATTGTT+TGG | - | chr7_2:55285660-55285679 | Msa1063390:intron | 25.0% |
| !!! | TGTTTTTGCTATCTCTAAAT+AGG | - | chr7_2:55285772-55285791 | Msa1063390:intron | 25.0% |
| ! | TTGATCTCGAATTAGTTTAG+TGG | - | chr7_2:55279025-55279044 | Msa1063390:CDS | 30.0% |
| ATAATAGATATGTTGTCCAG+AGG | - | chr7_2:55279055-55279074 | Msa1063390:CDS | 30.0% | |
| TAATAGATATGTTGTCCAGA+GGG | - | chr7_2:55279056-55279075 | Msa1063390:CDS | 30.0% | |
| ! | TTTTATGAGATAGCAAAGTG+GGG | + | chr7_2:55279152-55279171 | None:intergenic | 30.0% |
| ! | CTTTTTATGAGATAGCAAAG+TGG | + | chr7_2:55279154-55279173 | None:intergenic | 30.0% |
| ! | CACTTTGCTATCTCATAAAA+AGG | - | chr7_2:55279152-55279171 | Msa1063390:intron | 30.0% |
| ATTATAATAGTTCGTTCTCC+TGG | - | chr7_2:55279279-55279298 | Msa1063390:intron | 30.0% | |
| TTATAATAGTTCGTTCTCCT+GGG | - | chr7_2:55279280-55279299 | Msa1063390:intron | 30.0% | |
| ! | TAGCTTAAACAAGCTTTTTG+TGG | - | chr7_2:55279640-55279659 | Msa1063390:intron | 30.0% |
| AACCCAATACAAAATGGTTA+AGG | - | chr7_2:55279681-55279700 | Msa1063390:intron | 30.0% | |
| ! | GACCTTAACCATTTTGTATT+GGG | + | chr7_2:55279686-55279705 | None:intergenic | 30.0% |
| CATAACCATGAAAATCAACA+CGG | - | chr7_2:55279719-55279738 | Msa1063390:intron | 30.0% | |
| ! | GTTGTTTAAGATGCATTGTT+TGG | + | chr7_2:55279800-55279819 | None:intergenic | 30.0% |
| ! | AGGGTTGATTAACTATTAAG+GGG | + | chr7_2:55279937-55279956 | None:intergenic | 30.0% |
| ! | GAGGGTTGATTAACTATTAA+GGG | + | chr7_2:55279938-55279957 | None:intergenic | 30.0% |
| ! | TGAGGGTTGATTAACTATTA+AGG | + | chr7_2:55279939-55279958 | None:intergenic | 30.0% |
| TACACTTTCAAACAATTGTC+TGG | - | chr7_2:55280084-55280103 | Msa1063390:CDS | 30.0% | |
| ATTTGGTCCAAACATACTTA+TGG | - | chr7_2:55280197-55280216 | Msa1063390:intron | 30.0% | |
| TAGTCAAAGGATAACTTCTT+TGG | + | chr7_2:55280271-55280290 | None:intergenic | 30.0% | |
| ACAATTAGTAATAAGTAGGG+TGG | - | chr7_2:55280628-55280647 | Msa1063390:intron | 30.0% | |
| ! | ATATCGACGATAATTTGCAT+TGG | - | chr7_2:55280915-55280934 | Msa1063390:CDS | 30.0% |
| AAATGGATCACAAGTAGTTT+GGG | + | chr7_2:55280979-55280998 | None:intergenic | 30.0% | |
| AAAATGGATCACAAGTAGTT+TGG | + | chr7_2:55280980-55280999 | None:intergenic | 30.0% | |
| CGAATGTGTGAATTTATATC+GGG | - | chr7_2:55281009-55281028 | Msa1063390:intron | 30.0% | |
| !! | AGTGTGAAAATGTTGATGAT+GGG | + | chr7_2:55281202-55281221 | None:intergenic | 30.0% |
| ! | AAGTGTGAAAATGTTGATGA+TGG | + | chr7_2:55281203-55281222 | None:intergenic | 30.0% |
| CCATAACAGAAAATGAAAGA+AGG | + | chr7_2:55281346-55281365 | None:intergenic | 30.0% | |
| ! | CCTTCTTTCATTTTCTGTTA+TGG | - | chr7_2:55281343-55281362 | Msa1063390:intron | 30.0% |
| TGTACAGAATATTAATAGGC+TGG | + | chr7_2:55281717-55281736 | None:intergenic | 30.0% | |
| ! | ATTAAGTTGTTTATCCAACC+TGG | + | chr7_2:55281760-55281779 | None:intergenic | 30.0% |
| !!! | TTACCCTATTTTTACACAAG+AGG | + | chr7_2:55282069-55282088 | None:intergenic | 30.0% |
| TCTTGTGTAAAAATAGGGTA+AGG | - | chr7_2:55282068-55282087 | Msa1063390:intron | 30.0% | |
| TAATAAATAAAAGGGCAACC+CGG | + | chr7_2:55282160-55282179 | None:intergenic | 30.0% | |
| GTAGTGTTTGGTAAAATTAG+CGG | + | chr7_2:55282223-55282242 | None:intergenic | 30.0% | |
| !!! | ATTTTTGGTTGTTATCCCTT+CGG | - | chr7_2:55282373-55282392 | Msa1063390:intron | 30.0% |
| GTATACATAAACCAAGCAAT+TGG | + | chr7_2:55282541-55282560 | None:intergenic | 30.0% | |
| ! | TAGAGTATCAACTAACCATT+GGG | + | chr7_2:55282766-55282785 | None:intergenic | 30.0% |
| ! | TTAGAGTATCAACTAACCAT+TGG | + | chr7_2:55282767-55282786 | None:intergenic | 30.0% |
| AAATATGAGCAAGATATGCT+TGG | - | chr7_2:55282925-55282944 | Msa1063390:intron | 30.0% | |
| AATATGAGCAAGATATGCTT+GGG | - | chr7_2:55282926-55282945 | Msa1063390:intron | 30.0% | |
| ! | TCTGTTTGGACATATTGATT+TGG | - | chr7_2:55283203-55283222 | Msa1063390:intron | 30.0% |
| AAAGCACATTGACAAATTTG+AGG | + | chr7_2:55283230-55283249 | None:intergenic | 30.0% | |
| TATACAACTTGGTTCATGAA+GGG | + | chr7_2:55283262-55283281 | None:intergenic | 30.0% | |
| ATATACAACTTGGTTCATGA+AGG | + | chr7_2:55283263-55283282 | None:intergenic | 30.0% | |
| ! | AATCAAATTGAAATGATGGG+GGG | - | chr7_2:55283387-55283406 | Msa1063390:intron | 30.0% |
| ! | AAAAGCATGAGATCAAGTTT+AGG | + | chr7_2:55283548-55283567 | None:intergenic | 30.0% |
| !! | CTCATGCTTTTTAACAGTAT+TGG | - | chr7_2:55283557-55283576 | Msa1063390:intron | 30.0% |
| GAACTTTCATAGACTTGATT+AGG | + | chr7_2:55283684-55283703 | None:intergenic | 30.0% | |
| AGCTAAAAACTATAGCATGT+TGG | - | chr7_2:55284003-55284022 | Msa1063390:CDS | 30.0% | |
| GCTAAAAACTATAGCATGTT+GGG | - | chr7_2:55284004-55284023 | Msa1063390:CDS | 30.0% | |
| ACACAAATCTTCAAAATCCA+AGG | + | chr7_2:55284041-55284060 | None:intergenic | 30.0% | |
| !! | AAAGAGGCTGTTTCTTTATT+AGG | - | chr7_2:55284086-55284105 | Msa1063390:intron | 30.0% |
| TGCTTTGCTTTGTAAATATC+AGG | - | chr7_2:55284273-55284292 | Msa1063390:intron | 30.0% | |
| TTTGCTTTGTAAATATCAGG+TGG | - | chr7_2:55284276-55284295 | Msa1063390:intron | 30.0% | |
| !! | CCCATTTATTTGATTTGTTG+AGG | + | chr7_2:55284386-55284405 | None:intergenic | 30.0% |
| TATATAAACATGCCCATAAG+TGG | - | chr7_2:55284450-55284469 | Msa1063390:intron | 30.0% | |
| ATATAAACATGCCCATAAGT+GGG | - | chr7_2:55284451-55284470 | Msa1063390:intron | 30.0% | |
| GAATACTATTACCCACTTAT+GGG | + | chr7_2:55284465-55284484 | None:intergenic | 30.0% | |
| AGAATACTATTACCCACTTA+TGG | + | chr7_2:55284466-55284485 | None:intergenic | 30.0% | |
| !! | TAGTATTCTAGCTTGTCTAA+AGG | - | chr7_2:55284477-55284496 | Msa1063390:intron | 30.0% |
| TGAAAATCAGTGGAATTTCA+TGG | - | chr7_2:55284511-55284530 | Msa1063390:intron | 30.0% | |
| !!! | CGCTCATTCTATGTTTTTTT+TGG | + | chr7_2:55284562-55284581 | None:intergenic | 30.0% |
| !!! | GTGGAAATAATGTGTCATTT+TGG | - | chr7_2:55284866-55284885 | Msa1063390:intron | 30.0% |
| ! | ATTTTTGTGACAGTTAAACC+AGG | + | chr7_2:55285102-55285121 | None:intergenic | 30.0% |
| AAAATGGAGACATTGTTATG+AGG | - | chr7_2:55285151-55285170 | Msa1063390:intron | 30.0% | |
| !! | TTCTTTTCAGGATACTAACA+AGG | - | chr7_2:55285215-55285234 | Msa1063390:intron | 30.0% |
| TAAAAGAGGATACATGTACT+AGG | + | chr7_2:55285377-55285396 | None:intergenic | 30.0% | |
| AAACACAATGTAACATGCAT+TGG | + | chr7_2:55285540-55285559 | None:intergenic | 30.0% | |
| !! | TGTTTACCTGTTTTTCCTTT+AGG | - | chr7_2:55285555-55285574 | Msa1063390:intron | 30.0% |
| !! | GTTTACCTGTTTTTCCTTTA+GGG | - | chr7_2:55285556-55285575 | Msa1063390:intron | 30.0% |
| !! | TTTACCTGTTTTTCCTTTAG+GGG | - | chr7_2:55285557-55285576 | Msa1063390:intron | 30.0% |
| GTATCTAATTTCCAATGCTT+CGG | + | chr7_2:55285654-55285673 | None:intergenic | 30.0% | |
| CAACCTATTGGTATATCAAT+GGG | - | chr7_2:55285827-55285846 | Msa1063390:intron | 30.0% | |
| CTGAACTGTATGTGATTTAA+AGG | - | chr7_2:55286103-55286122 | Msa1063390:intron | 30.0% | |
| !! | TGTGATTTAAAGGTACCTAA+AGG | - | chr7_2:55286113-55286132 | Msa1063390:intron | 30.0% |
| GTTGTCAAAGTTCTTCGATA+TGG | - | chr7_2:55278912-55278931 | Msa1063390:CDS | 35.0% | |
| ! | AACTCTAAGGAGTAACAAGA+TGG | + | chr7_2:55278986-55279005 | None:intergenic | 35.0% |
| GTAGCTAATCATTGAGTCAT+TGG | - | chr7_2:55279095-55279114 | Msa1063390:CDS | 35.0% | |
| ATTCGAAATTGATTGGGTGT+TGG | + | chr7_2:55279436-55279455 | None:intergenic | 35.0% | |
| ! | CGACCTTAACCATTTTGTAT+TGG | + | chr7_2:55279687-55279706 | None:intergenic | 35.0% |
| !!! | CGTGTTGATTTTCATGGTTA+TGG | + | chr7_2:55279721-55279740 | None:intergenic | 35.0% |
| AGTTGTTCATGAGGAACTAA+CGG | + | chr7_2:55279981-55280000 | None:intergenic | 35.0% | |
| CGAGATTAAAGTTGTTCATG+AGG | + | chr7_2:55279990-55280009 | None:intergenic | 35.0% | |
| GCTATGACATATTGCAATCT+TGG | + | chr7_2:55280046-55280065 | None:intergenic | 35.0% | |
| !! | ACTTCTTTGGTGTTTGATGA+AGG | + | chr7_2:55280258-55280277 | None:intergenic | 35.0% |
| ! | AGAATGACATTTAAAGCGGA+TGG | + | chr7_2:55280308-55280327 | None:intergenic | 35.0% |
| TAGGGTTAAGACAAATCTGA+AGG | - | chr7_2:55280749-55280768 | Msa1063390:intron | 35.0% | |
| ATAAAAGACGAGTTTCAGCT+GGG | - | chr7_2:55280776-55280795 | Msa1063390:intron | 35.0% | |
| CTATGCCCAAAACTAAAAAG+AGG | + | chr7_2:55280812-55280831 | None:intergenic | 35.0% | |
| AGTAGTTTGGGTGAATATTG+CGG | + | chr7_2:55280967-55280986 | None:intergenic | 35.0% | |
| TGTGTGAATTTATATCGGGT+TGG | - | chr7_2:55281013-55281032 | Msa1063390:intron | 35.0% | |
| !! | TGAATTTATATCGGGTTGGT+CGG | - | chr7_2:55281017-55281036 | Msa1063390:intron | 35.0% |
| ! | TTTCGCTTTATTACTGGGTA+CGG | + | chr7_2:55281059-55281078 | None:intergenic | 35.0% |
| TGATGGGAAGAAGAAGAAAA+TGG | + | chr7_2:55281186-55281205 | None:intergenic | 35.0% | |
| AAGAAGAAGAAGAAGAAGGA+AGG | + | chr7_2:55281259-55281278 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | + | chr7_2:55281263-55281282 | None:intergenic | 35.0% | |
| TTAAAGAGAGAGATACCTTG+TGG | + | chr7_2:55281314-55281333 | None:intergenic | 35.0% | |
| GGTGGCAAATCAAAATATGA+AGG | + | chr7_2:55281511-55281530 | None:intergenic | 35.0% | |
| AATGCAAGAGAAACATCAAG+TGG | + | chr7_2:55281532-55281551 | None:intergenic | 35.0% | |
| AAATCAAGGTTGTTACCACA+AGG | + | chr7_2:55281586-55281605 | None:intergenic | 35.0% | |
| CGTTCACAGCAAAAAGATTT+AGG | - | chr7_2:55281784-55281803 | Msa1063390:intron | 35.0% | |
| !! | ATTTTTAAGAGGGGTAACCT+TGG | - | chr7_2:55281986-55282005 | Msa1063390:intron | 35.0% |
| AAAGTTGTCATGTGACTAGA+AGG | - | chr7_2:55282018-55282037 | Msa1063390:intron | 35.0% | |
| ACAGCCTCTTGTGTAAAAAT+AGG | - | chr7_2:55282062-55282081 | Msa1063390:intron | 35.0% | |
| CAGCCTCTTGTGTAAAAATA+GGG | - | chr7_2:55282063-55282082 | Msa1063390:intron | 35.0% | |
| TGTACAATACACCAAATGGT+GGG | - | chr7_2:55282094-55282113 | Msa1063390:intron | 35.0% | |
| GTCAAGAGGCAATTAAAATC+TGG | - | chr7_2:55282433-55282452 | Msa1063390:intron | 35.0% | |
| ! | TTTGTTGGTGGAACAATTCT+TGG | + | chr7_2:55282459-55282478 | None:intergenic | 35.0% |
| !! | AGAACCTGAGTTTGATTTGT+TGG | + | chr7_2:55282474-55282493 | None:intergenic | 35.0% |
| CATGTGAGACTATTTAACAG+AGG | + | chr7_2:55282699-55282718 | None:intergenic | 35.0% | |
| ATACATTAGCCAATCCAAAC+AGG | - | chr7_2:55282740-55282759 | Msa1063390:intron | 35.0% | |
| !! | ATTCGATGACTTGTTGAAAC+CGG | - | chr7_2:55283017-55283036 | Msa1063390:intron | 35.0% |
| !! | GCTTTGGAATAGCATGAAAT+GGG | + | chr7_2:55283597-55283616 | None:intergenic | 35.0% |
| !! | AGCTTTGGAATAGCATGAAA+TGG | + | chr7_2:55283598-55283617 | None:intergenic | 35.0% |
| TTTCATGCTATTCCAAAGCT+TGG | - | chr7_2:55283598-55283617 | Msa1063390:intron | 35.0% | |
| ! | CTAGTTGTGATTGATTCTCA+GGG | - | chr7_2:55283715-55283734 | Msa1063390:CDS | 35.0% |
| CACAAAGTATAGCATTGTGT+GGG | - | chr7_2:55283940-55283959 | Msa1063390:CDS | 35.0% | |
| ATAAAGAAACAGCCTCTTTG+AGG | + | chr7_2:55284085-55284104 | None:intergenic | 35.0% | |
| CTTTGTAAATATCAGGTGGA+AGG | - | chr7_2:55284280-55284299 | Msa1063390:intron | 35.0% | |
| ! | ATTTGTTGGTTATCTTCGCA+AGG | - | chr7_2:55284356-55284375 | Msa1063390:intron | 35.0% |
| AGCGAATGAATATGAACGTT+TGG | - | chr7_2:55284578-55284597 | Msa1063390:intron | 35.0% | |
| !!! | GAAACATTTTAGGACCTGTT+TGG | - | chr7_2:55284733-55284752 | Msa1063390:intron | 35.0% |
| ! | TTGTTTTCATCGTTTCCTGT+TGG | - | chr7_2:55284820-55284839 | Msa1063390:intron | 35.0% |
| TTATTTCCACCTTCTTTCGT+AGG | + | chr7_2:55284856-55284875 | None:intergenic | 35.0% | |
| GAGTAATTATGATGTGAAGC+AGG | + | chr7_2:55285020-55285039 | None:intergenic | 35.0% | |
| ! | AGAAGGAGTCAATTCTTTTC+AGG | - | chr7_2:55285203-55285222 | Msa1063390:intron | 35.0% |
| CTAACAAGGTAACATTTACG+TGG | - | chr7_2:55285229-55285248 | Msa1063390:intron | 35.0% | |
| TTATTCAAATAATCACCGCG+TGG | - | chr7_2:55285273-55285292 | Msa1063390:intron | 35.0% | |
| ACACATGCAGAATACTACAA+CGG | + | chr7_2:55285415-55285434 | None:intergenic | 35.0% | |
| TGTAGTATTCTGCATGTGTT+AGG | - | chr7_2:55285416-55285435 | Msa1063390:intron | 35.0% | |
| GAGTGATAGATTCAACAGAT+TGG | + | chr7_2:55285518-55285537 | None:intergenic | 35.0% | |
| CAAATAAAACGTTCCCCTAA+AGG | + | chr7_2:55285573-55285592 | None:intergenic | 35.0% | |
| ! | TTTTGATATGTACTGCTGAC+TGG | - | chr7_2:55285684-55285703 | Msa1063390:intron | 35.0% |
| GCAACCTATTGGTATATCAA+TGG | - | chr7_2:55285826-55285845 | Msa1063390:intron | 35.0% | |
| ATGCCCATTGATATACCAAT+AGG | + | chr7_2:55285833-55285852 | None:intergenic | 35.0% | |
| ATGTGAACCGAAATTGTCTA+CGG | + | chr7_2:55285986-55286005 | None:intergenic | 35.0% | |
| ! | TTCAACTGTCTGGTTCAATT+TGG | - | chr7_2:55286006-55286025 | Msa1063390:intron | 35.0% |
| !! | TTTAAAGGTACCTAAAGGAG+AGG | - | chr7_2:55286118-55286137 | Msa1063390:intron | 35.0% |
| CAAATTGTTTCCTCTCCTTT+AGG | + | chr7_2:55286131-55286150 | None:intergenic | 35.0% | |
| CTAAAGGAGAGGAAACAATT+TGG | - | chr7_2:55286129-55286148 | Msa1063390:intron | 35.0% | |
| !! | TTGATTTGGAAAGCTGCTAA+TGG | + | chr7_2:55286159-55286178 | None:intergenic | 35.0% |
| ! | CAAGTTTCTGTTGGTTGATT+TGG | + | chr7_2:55286173-55286192 | None:intergenic | 35.0% |
| GCATTTGAACAAGTTTCTGT+TGG | + | chr7_2:55286182-55286201 | None:intergenic | 35.0% | |
| CTATGCAAGTTGTATGAAAG+TGG | - | chr7_2:55286240-55286259 | Msa1063390:intron | 35.0% | |
| AAGATGGTATCTACCGTTTG+AGG | + | chr7_2:55278970-55278989 | None:intergenic | 40.0% | |
| ! | GCACTCTAAGGAAAACTCTA+AGG | + | chr7_2:55278999-55279018 | None:intergenic | 40.0% |
| ! | GATCAATACAGAGCACTCTA+AGG | + | chr7_2:55279011-55279030 | None:intergenic | 40.0% |
| TTGATCACATGTAATCCCTC+TGG | + | chr7_2:55279074-55279093 | None:intergenic | 40.0% | |
| TATTGTGCGACGTACAAACA+AGG | - | chr7_2:55279220-55279239 | Msa1063390:intron | 40.0% | |
| ! | TATGTCGTTTATCCAAACCC+AGG | + | chr7_2:55279300-55279319 | None:intergenic | 40.0% |
| TTGGGTCGTCTAAGTCAATT+AGG | + | chr7_2:55279589-55279608 | None:intergenic | 40.0% | |
| !!! | TGCATCCGTGTTGATTTTCA+TGG | + | chr7_2:55279727-55279746 | None:intergenic | 40.0% |
| GGAGCATGTATTACAAGTGA+GGG | + | chr7_2:55279956-55279975 | None:intergenic | 40.0% | |
| TGGAGCATGTATTACAAGTG+AGG | + | chr7_2:55279957-55279976 | None:intergenic | 40.0% | |
| GATAAAAGACGAGTTTCAGC+TGG | - | chr7_2:55280775-55280794 | Msa1063390:intron | 40.0% | |
| GGGTTCTTATGAGTATACTC+GGG | + | chr7_2:55280946-55280965 | None:intergenic | 40.0% | |
| CGGGTTCTTATGAGTATACT+CGG | + | chr7_2:55280947-55280966 | None:intergenic | 40.0% | |
| GTAGTTTGGGTGAATATTGC+GGG | + | chr7_2:55280966-55280985 | None:intergenic | 40.0% | |
| !! | GAATTTATATCGGGTTGGTC+GGG | - | chr7_2:55281018-55281037 | Msa1063390:intron | 40.0% |
| ! | TTCGCTTTATTACTGGGTAC+GGG | + | chr7_2:55281058-55281077 | None:intergenic | 40.0% |
| GAAGGTGAAATGAAGCGATT+GGG | + | chr7_2:55281241-55281260 | None:intergenic | 40.0% | |
| GATCACAGGATCATAATGCA+CGG | + | chr7_2:55281383-55281402 | None:intergenic | 40.0% | |
| TAGGACATGCATTTATGTCC+AGG | - | chr7_2:55281739-55281758 | Msa1063390:intron | 40.0% | |
| ACATGCATTTATGTCCAGGT+TGG | - | chr7_2:55281743-55281762 | Msa1063390:intron | 40.0% | |
| GCTGTGTACAATACACCAAA+TGG | - | chr7_2:55282090-55282109 | Msa1063390:intron | 40.0% | |
| GTGTACAATACACCAAATGG+TGG | - | chr7_2:55282093-55282112 | Msa1063390:intron | 40.0% | |
| TGATACGAAGTTTGGTCAAG+AGG | - | chr7_2:55282419-55282438 | Msa1063390:intron | 40.0% | |
| TCCACCAACAAATCAAACTC+AGG | - | chr7_2:55282467-55282486 | Msa1063390:intron | 40.0% | |
| !! | ACCTGAGTTTGATTTGTTGG+TGG | + | chr7_2:55282471-55282490 | None:intergenic | 40.0% |
| CTGCTGAACAATTCGTTCTT+TGG | - | chr7_2:55282492-55282511 | Msa1063390:intron | 40.0% | |
| CTGAACAATTCGTTCTTTGG+TGG | - | chr7_2:55282495-55282514 | Msa1063390:intron | 40.0% | |
| ACCCTGTAGAGCTTAATAAG+CGG | - | chr7_2:55282641-55282660 | Msa1063390:intron | 40.0% | |
| TCCGCTTATTAAGCTCTACA+GGG | + | chr7_2:55282645-55282664 | None:intergenic | 40.0% | |
| CTCTCTCACTTTCATCCTAA+TGG | + | chr7_2:55283052-55283071 | None:intergenic | 40.0% | |
| ! | GATGAAAGTGAGAGAGTGTA+TGG | - | chr7_2:55283056-55283075 | Msa1063390:intron | 40.0% |
| AAAAGAAAAGGAGCTTGCCT+GGG | + | chr7_2:55283106-55283125 | None:intergenic | 40.0% | |
| AAAAAGAAAAGGAGCTTGCC+TGG | + | chr7_2:55283107-55283126 | None:intergenic | 40.0% | |
| AACACACGTAGCATCTTTGA+GGG | - | chr7_2:55283307-55283326 | Msa1063390:intron | 40.0% | |
| !!! | ATCTTTTGGAGCAAGAGTGA+AGG | - | chr7_2:55283473-55283492 | Msa1063390:intron | 40.0% |
| CATGAGATCAAGTTTAGGAG+AGG | + | chr7_2:55283543-55283562 | None:intergenic | 40.0% | |
| ! | TATTCCAAAGCTTGGTGAAC+TGG | - | chr7_2:55283606-55283625 | Msa1063390:intron | 40.0% |
| ! | ATTCCAAAGCTTGGTGAACT+GGG | - | chr7_2:55283607-55283626 | Msa1063390:intron | 40.0% |
| TATTGCTGGTGGTACAATCA+AGG | - | chr7_2:55283630-55283649 | Msa1063390:intron | 40.0% | |
| ! | GCTAGTTGTGATTGATTCTC+AGG | - | chr7_2:55283714-55283733 | Msa1063390:CDS | 40.0% |
| ! | GTGATTGATTCTCAGGGTTA+TGG | - | chr7_2:55283721-55283740 | Msa1063390:CDS | 40.0% |
| AGCAATAGCACTTCCAGTTA+CGG | + | chr7_2:55283761-55283780 | None:intergenic | 40.0% | |
| !! | CATTTTGGTCCATTCATCCT+TGG | - | chr7_2:55283822-55283841 | Msa1063390:intron | 40.0% |
| CCACACAATGCTATACTTTG+TGG | + | chr7_2:55283942-55283961 | None:intergenic | 40.0% | |
| CCACAAAGTATAGCATTGTG+TGG | - | chr7_2:55283939-55283958 | Msa1063390:CDS | 40.0% | |
| TTTGAAGACCACAGCAACTA+AGG | - | chr7_2:55284146-55284165 | Msa1063390:intron | 40.0% | |
| TGTAAATATCAGGTGGAAGG+TGG | - | chr7_2:55284283-55284302 | Msa1063390:intron | 40.0% | |
| !! | CAGTACGTTTGCTGATTTGT+TGG | - | chr7_2:55284342-55284361 | Msa1063390:intron | 40.0% |
| !!! | CACTGATTTTCAGATCTCTG+TGG | + | chr7_2:55284503-55284522 | None:intergenic | 40.0% |
| CACAGAGATCTGAAAATCAG+TGG | - | chr7_2:55284501-55284520 | Msa1063390:intron | 40.0% | |
| AAGAAAATCTCGAGCCAAAC+AGG | + | chr7_2:55284750-55284769 | None:intergenic | 40.0% | |
| TTCATCGTTTCCTGTTGGAA+TGG | - | chr7_2:55284825-55284844 | Msa1063390:intron | 40.0% | |
| ATCGTAAAAAAGGATGCACC+TGG | - | chr7_2:55285081-55285100 | Msa1063390:intron | 40.0% | |
| GGACTTCGAATCGTACAAAA+TGG | - | chr7_2:55285135-55285154 | Msa1063390:intron | 40.0% | |
| ! | GAAAGTTTTTGTCCCTGATG+AGG | - | chr7_2:55285173-55285192 | Msa1063390:intron | 40.0% |
| CTTCTATTCTGTCCTCATCA+GGG | + | chr7_2:55285188-55285207 | None:intergenic | 40.0% | |
| ! | TTGTTGTTGATGAAACCACG+CGG | + | chr7_2:55285291-55285310 | None:intergenic | 40.0% |
| GAGGATACATGTACTAGGAT+TGG | + | chr7_2:55285372-55285391 | None:intergenic | 40.0% | |
| !! | ACAGCAACTGGTTCTAAAAG+AGG | + | chr7_2:55285391-55285410 | None:intergenic | 40.0% |
| GACTGAAATCAGCATTTGTC+TGG | - | chr7_2:55285443-55285462 | Msa1063390:intron | 40.0% | |
| !! | TCAGCATTTGTCTGGTTCTA+CGG | - | chr7_2:55285451-55285470 | Msa1063390:intron | 40.0% |
| ! | GTGCACTGGCAATAAAAGAA+TGG | + | chr7_2:55285477-55285496 | None:intergenic | 40.0% |
| TTTATTGCCAGTGCACTAGA+AGG | - | chr7_2:55285481-55285500 | Msa1063390:intron | 40.0% | |
| ! | TTTTCTTCTCTCCGAAGCAT+TGG | - | chr7_2:55285640-55285659 | Msa1063390:intron | 40.0% |
| GCATCTATGATATGTGTCAC+AGG | - | chr7_2:55285849-55285868 | Msa1063390:intron | 40.0% | |
| !! | TGTCTACGGCTCATTGATTT+CGG | + | chr7_2:55285972-55285991 | None:intergenic | 40.0% |
| CAATGAGCCGTAGACAATTT+CGG | - | chr7_2:55285976-55285995 | Msa1063390:intron | 40.0% | |
| GTTCAAGCGATGATTCTTGT+TGG | - | chr7_2:55286210-55286229 | Msa1063390:intron | 40.0% | |
| AAGCGATGATTCTTGTTGGT+TGG | - | chr7_2:55286214-55286233 | Msa1063390:intron | 40.0% | |
| TGAAAGTGGTAAAATGACCC+CGG | - | chr7_2:55286254-55286273 | Msa1063390:intron | 40.0% | |
| AGATAGCAAAGTGGGGTCAT+GGG | + | chr7_2:55279145-55279164 | None:intergenic | 45.0% | |
| GTCGTTGTCGTGTGACTATA+TGG | + | chr7_2:55279182-55279201 | None:intergenic | 45.0% | |
| AGTCACACGACAACGACAAA+TGG | - | chr7_2:55279185-55279204 | Msa1063390:intron | 45.0% | |
| CACGACAACGACAAATGGTT+TGG | - | chr7_2:55279190-55279209 | Msa1063390:intron | 45.0% | |
| ATAGTTCGTTCTCCTGGGTT+TGG | - | chr7_2:55279285-55279304 | Msa1063390:intron | 45.0% | |
| GTTCATGAGGAACTAACGGT+TGG | + | chr7_2:55279977-55279996 | None:intergenic | 45.0% | |
| CATCTCATTCATCCACTCGT+GGG | + | chr7_2:55280721-55280740 | None:intergenic | 45.0% | |
| TCATCTCATTCATCCACTCG+TGG | + | chr7_2:55280722-55280741 | None:intergenic | 45.0% | |
| !! | CGATTGGGTTGGTTTGTGTT+GGG | + | chr7_2:55281226-55281245 | None:intergenic | 45.0% |
| GTGAAATGAAGCGATTGGGT+TGG | + | chr7_2:55281237-55281256 | None:intergenic | 45.0% | |
| GGAAGGTGAAATGAAGCGAT+TGG | + | chr7_2:55281242-55281261 | None:intergenic | 45.0% | |
| !! | TTGTGGATTGGAACGAGTCA+TGG | + | chr7_2:55281297-55281316 | None:intergenic | 45.0% |
| ATGACTCGTTCCAATCCACA+AGG | - | chr7_2:55281296-55281315 | Msa1063390:intron | 45.0% | |
| GAGAGAGATACCTTGTGGAT+TGG | + | chr7_2:55281309-55281328 | None:intergenic | 45.0% | |
| GCAAGAGAAACATCAAGTGG+TGG | + | chr7_2:55281529-55281548 | None:intergenic | 45.0% | |
| GTTACCACAAGGAGGAAAAG+TGG | + | chr7_2:55281575-55281594 | None:intergenic | 45.0% | |
| TCAAGGTTGTTACCACAAGG+AGG | + | chr7_2:55281583-55281602 | None:intergenic | 45.0% | |
| GTCATGTGACTAGAAGGTCA+CGG | - | chr7_2:55282024-55282043 | Msa1063390:intron | 45.0% | |
| TCATGTGACTAGAAGGTCAC+GGG | - | chr7_2:55282025-55282044 | Msa1063390:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr7_2:55282058-55282077 | None:intergenic | 45.0% |
| ATGCTTAGTTAGGCTCTGCT+TGG | + | chr7_2:55282311-55282330 | None:intergenic | 45.0% | |
| GACCAAACTTCGTATCACCA+GGG | + | chr7_2:55282416-55282435 | None:intergenic | 45.0% | |
| TGACCAAACTTCGTATCACC+AGG | + | chr7_2:55282417-55282436 | None:intergenic | 45.0% | |
| CTCCGCTTATTAAGCTCTAC+AGG | + | chr7_2:55282646-55282665 | None:intergenic | 45.0% | |
| AACTAACCATTGGGCCTGTT+TGG | + | chr7_2:55282757-55282776 | None:intergenic | 45.0% | |
| GAGCAAGATATGCTTGGGTT+TGG | - | chr7_2:55282931-55282950 | Msa1063390:intron | 45.0% | |
| CAAGATATGCTTGGGTTTGG+AGG | - | chr7_2:55282934-55282953 | Msa1063390:intron | 45.0% | |
| TATTGCTCCCATAATGACCC+AGG | - | chr7_2:55283086-55283105 | Msa1063390:intron | 45.0% | |
| CAACACACGTAGCATCTTTG+AGG | - | chr7_2:55283306-55283325 | Msa1063390:intron | 45.0% | |
| ATACCCAGTTCACCAAGCTT+TGG | + | chr7_2:55283613-55283632 | None:intergenic | 45.0% | |
| ! | TGAGCATTGCCAAGGATGAA+TGG | + | chr7_2:55283834-55283853 | None:intergenic | 45.0% |
| TCCTTGGCAATGCTCACTAT+AGG | - | chr7_2:55283838-55283857 | Msa1063390:intron | 45.0% | |
| ! | ACCTATAGTGAGCATTGCCA+AGG | + | chr7_2:55283842-55283861 | None:intergenic | 45.0% |
| !! | GCAAAAGTATCTACCGTCGT+TGG | - | chr7_2:55283977-55283996 | Msa1063390:CDS | 45.0% |
| !!! | GTTTTTAGCTGTGCCAACGA+CGG | + | chr7_2:55283993-55284012 | None:intergenic | 45.0% |
| !! | GTTGGGTTAGTCTTCTTCCT+TGG | - | chr7_2:55284021-55284040 | Msa1063390:CDS | 45.0% |
| GAAGTTACCACTCCTCAAAG+AGG | - | chr7_2:55284070-55284089 | Msa1063390:intron | 45.0% | |
| TCCATAGTCAGGTTCAGTCA+AGG | + | chr7_2:55284112-55284131 | None:intergenic | 45.0% | |
| CTTGCATCACTTCCATAGTC+AGG | + | chr7_2:55284123-55284142 | None:intergenic | 45.0% | |
| TCACTGAACCTTAGTTGCTG+TGG | + | chr7_2:55284157-55284176 | None:intergenic | 45.0% | |
| AATATCAGGTGGAAGGTGGT+TGG | - | chr7_2:55284287-55284306 | Msa1063390:intron | 45.0% | |
| ! | TGTTTCCTATCCACCGCTTT+TGG | + | chr7_2:55284324-55284343 | None:intergenic | 45.0% |
| TGGGTGCGAAGAAATAGTAC+AGG | + | chr7_2:55284542-55284561 | None:intergenic | 45.0% | |
| CTGAGTAGTGGCCATAGATT+TGG | + | chr7_2:55284628-55284647 | None:intergenic | 45.0% | |
| ! | GTGAAGTTCTAGCTGAGTAG+TGG | + | chr7_2:55284640-55284659 | None:intergenic | 45.0% |
| ATGGTCCAACCTACGAAAGA+AGG | - | chr7_2:55284844-55284863 | Msa1063390:intron | 45.0% | |
| TTCCACCTTCTTTCGTAGGT+TGG | + | chr7_2:55284852-55284871 | None:intergenic | 45.0% | |
| CCTTCTATTCTGTCCTCATC+AGG | + | chr7_2:55285189-55285208 | None:intergenic | 45.0% | |
| CCTGATGAGGACAGAATAGA+AGG | - | chr7_2:55285186-55285205 | Msa1063390:intron | 45.0% | |
| CGTTCCCCTAAAGGAAAAAC+AGG | + | chr7_2:55285564-55285583 | None:intergenic | 45.0% | |
| ATGGTTGCTTGGCAACCTAT+TGG | - | chr7_2:55285815-55285834 | Msa1063390:intron | 45.0% | |
| !! | TCACTGGTTCGATTCTGGTT+TGG | + | chr7_2:55285907-55285926 | None:intergenic | 45.0% |
| !! | AAGTCTCACTGGTTCGATTC+TGG | + | chr7_2:55285912-55285931 | None:intergenic | 45.0% |
| GAATCGAACCAGTGAGACTT+TGG | - | chr7_2:55285912-55285931 | Msa1063390:intron | 45.0% | |
| ACCAGTGAGACTTTGGATCA+TGG | - | chr7_2:55285919-55285938 | Msa1063390:intron | 45.0% | |
| ACCATGATCCAAAGTCTCAC+TGG | + | chr7_2:55285923-55285942 | None:intergenic | 45.0% | |
| !! | TACGGCTCATTGATTTCGGT+GGG | + | chr7_2:55285968-55285987 | None:intergenic | 45.0% |
| CGGTTCACATTTCAACTGTC+TGG | - | chr7_2:55285996-55286015 | Msa1063390:intron | 45.0% | |
| GAAAGTGGTAAAATGACCCC+GGG | - | chr7_2:55286255-55286274 | Msa1063390:intron | 45.0% | |
| !!! | AACTTAATTTTTAATTAAAA+GGG | - | chr7_2:55279392-55279411 | Msa1063390:CDS | 5.0% |
| ATAGCAAAGTGGGGTCATGG+GGG | + | chr7_2:55279143-55279162 | None:intergenic | 50.0% | |
| GATAGCAAAGTGGGGTCATG+GGG | + | chr7_2:55279144-55279163 | None:intergenic | 50.0% | |
| GAGATAGCAAAGTGGGGTCA+TGG | + | chr7_2:55279146-55279165 | None:intergenic | 50.0% | |
| CGATCTCTATTCAACGCGAG+AGG | - | chr7_2:55279489-55279508 | Msa1063390:intron | 50.0% | |
| !! | GCGATTGGGTTGGTTTGTGT+TGG | + | chr7_2:55281227-55281246 | None:intergenic | 50.0% |
| ATTGGAACGAGTCATGGTGG+TGG | + | chr7_2:55281291-55281310 | None:intergenic | 50.0% | |
| ! | TGGATTGGAACGAGTCATGG+TGG | + | chr7_2:55281294-55281313 | None:intergenic | 50.0% |
| CAAGGAGGAAAAGTGGATGC+TGG | + | chr7_2:55281568-55281587 | None:intergenic | 50.0% | |
| !! | GCATCCACTTTTCCTCCTTG+TGG | - | chr7_2:55281568-55281587 | Msa1063390:intron | 50.0% |
| ACAACTTTACCGTTGCGCCA+AGG | + | chr7_2:55282006-55282025 | None:intergenic | 50.0% | |
| CTAAAGCTCCCGCATACACA+GGG | + | chr7_2:55282133-55282152 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATACAC+AGG | + | chr7_2:55282134-55282153 | None:intergenic | 50.0% | |
| ACCACTTGAGCCCAATTGCT+TGG | - | chr7_2:55282527-55282546 | Msa1063390:intron | 50.0% | |
| ACCAAGCAATTGGGCTCAAG+TGG | + | chr7_2:55282531-55282550 | None:intergenic | 50.0% | |
| ACCATTGGGCCTGTTTGGAT+TGG | + | chr7_2:55282752-55282771 | None:intergenic | 50.0% | |
| !! | CGATGACTTGTTGAAACCGG+AGG | - | chr7_2:55283020-55283039 | Msa1063390:intron | 50.0% |
| GAGCTTGCCTGGGTCATTAT+GGG | + | chr7_2:55283096-55283115 | None:intergenic | 50.0% | |
| ! | CTTGGTGAACTGGGTATTGC+TGG | - | chr7_2:55283616-55283635 | Msa1063390:intron | 50.0% |
| TCTCAGGGTTATGGTTGTCC+TGG | - | chr7_2:55283730-55283749 | Msa1063390:CDS | 50.0% | |
| ! | TGTCCTGGTCTTTCCGTAAC+TGG | - | chr7_2:55283745-55283764 | Msa1063390:intron | 50.0% |
| CTTCCAGTTACGGAAAGACC+AGG | + | chr7_2:55283751-55283770 | None:intergenic | 50.0% | |
| ! | GAAACAGCCTCTTTGAGGAG+TGG | + | chr7_2:55284080-55284099 | None:intergenic | 50.0% |
| GCCTTGACTGAACCTGACTA+TGG | - | chr7_2:55284108-55284127 | Msa1063390:intron | 50.0% | |
| GAAGGTGGTTGGATCCTTGA+GGG | - | chr7_2:55284298-55284317 | Msa1063390:intron | 50.0% | |
| ! | GTAGGTTGGACCATTCCAAC+AGG | + | chr7_2:55284838-55284857 | None:intergenic | 50.0% |
| GTCCAACCTACGAAAGAAGG+TGG | - | chr7_2:55284847-55284866 | Msa1063390:intron | 50.0% | |
| TACTACAACGGCACAGCAAC+TGG | + | chr7_2:55285403-55285422 | None:intergenic | 50.0% | |
| !! | ACTTGCTGTTTCGCGTGTGA+TGG | - | chr7_2:55285796-55285815 | Msa1063390:intron | 50.0% |
| TTTCGCGTGTGATGGTTGCT+TGG | - | chr7_2:55285804-55285823 | Msa1063390:intron | 50.0% | |
| !! | CTACGGCTCATTGATTTCGG+TGG | + | chr7_2:55285969-55285988 | None:intergenic | 50.0% |
| TTTCCCAAGCTAGCATGACC+CGG | + | chr7_2:55286276-55286295 | None:intergenic | 50.0% | |
| TAGCAAAGTGGGGTCATGGG+GGG | + | chr7_2:55279142-55279161 | None:intergenic | 55.0% | |
| GAAACAACGCATCCCACGAG+TGG | - | chr7_2:55280706-55280725 | Msa1063390:intron | 55.0% | |
| GTGGATGCTGGAGTTGCTTG+AGG | + | chr7_2:55281556-55281575 | None:intergenic | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr7_2:55282037-55282056 | Msa1063390:intron | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr7_2:55282138-55282157 | Msa1063390:intron | 55.0% |
| ATCCCTTCGGTTCCCCAAGA+AGG | - | chr7_2:55282386-55282405 | Msa1063390:intron | 55.0% | |
| TCCCTTCGGTTCCCCAAGAA+GGG | - | chr7_2:55282387-55282406 | Msa1063390:intron | 55.0% | |
| CGCCCTGGTGATACGAAGTT+TGG | - | chr7_2:55282411-55282430 | Msa1063390:intron | 55.0% | |
| GCCAATCCAAACAGGCCCAA+TGG | - | chr7_2:55282748-55282767 | Msa1063390:intron | 55.0% | |
| CTTGTTGAAACCGGAGGAGC+AGG | - | chr7_2:55283026-55283045 | Msa1063390:intron | 55.0% | |
| ATCCTAATGGCCTGCTCCTC+CGG | + | chr7_2:55283039-55283058 | None:intergenic | 55.0% | |
| GGAGCTTGCCTGGGTCATTA+TGG | + | chr7_2:55283097-55283116 | None:intergenic | 55.0% | |
| ! | GGTGAACTGGGTATTGCTGG+TGG | - | chr7_2:55283619-55283638 | Msa1063390:intron | 55.0% |
| GGAAGGTGGTTGGATCCTTG+AGG | - | chr7_2:55284297-55284316 | Msa1063390:intron | 55.0% | |
| GGATCCTTGAGGGCCAAAAG+CGG | - | chr7_2:55284308-55284327 | Msa1063390:intron | 55.0% | |
| !! | GCGTTAGCCTTCTAGTGCAC+TGG | + | chr7_2:55285491-55285510 | None:intergenic | 55.0% |
| GTGCACTAGAAGGCTAACGC+TGG | - | chr7_2:55285491-55285510 | Msa1063390:intron | 55.0% | |
| TTCCCAAGCTAGCATGACCC+GGG | + | chr7_2:55286275-55286294 | None:intergenic | 55.0% | |
| ! | GGGTCATGCTAGCTTGGGAA+AGG | - | chr7_2:55286275-55286294 | Msa1063390:CDS | 55.0% |
| !! | CGGGTTGGTCGGGTATACTC+AGG | - | chr7_2:55281028-55281047 | Msa1063390:intron | 60.0% |
| GAGGGGTAACCTTGGCGCAA+CGG | - | chr7_2:55281994-55282013 | Msa1063390:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr7_2:55282106-55282125 | Msa1063390:intron | 60.0% |
| CATACACAGGGTCCGGGAAG+GGG | + | chr7_2:55282121-55282140 | None:intergenic | 60.0% | |
| GCATACACAGGGTCCGGGAA+GGG | + | chr7_2:55282122-55282141 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGTGTATG+CGG | - | chr7_2:55282121-55282140 | Msa1063390:intron | 60.0% | |
| TTCCCGGACCCTGTGTATGC+GGG | - | chr7_2:55282122-55282141 | Msa1063390:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr7_2:55282139-55282158 | Msa1063390:intron | 60.0% |
| CCCCTTCTTGGGGAACCGAA+GGG | + | chr7_2:55282391-55282410 | None:intergenic | 60.0% | |
| CCCTTCGGTTCCCCAAGAAG+GGG | - | chr7_2:55282388-55282407 | Msa1063390:intron | 60.0% | |
| AACCGGAGGAGCAGGCCATT+AGG | - | chr7_2:55283034-55283053 | Msa1063390:intron | 60.0% | |
| TCCTTGAGGGCCAAAAGCGG+TGG | - | chr7_2:55284311-55284330 | Msa1063390:intron | 60.0% | |
| !! | TCCACCGCTTTTGGCCCTCA+AGG | + | chr7_2:55284315-55284334 | None:intergenic | 60.0% |
| GAGGGCCAAAAGCGGTGGAT+AGG | - | chr7_2:55284316-55284335 | Msa1063390:intron | 60.0% | |
| ! | ACCCCGGGTCATGCTAGCTT+GGG | - | chr7_2:55286270-55286289 | Msa1063390:CDS | 60.0% |
| TCCCAAGCTAGCATGACCCG+GGG | + | chr7_2:55286274-55286293 | None:intergenic | 60.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr7_2:55282108-55282127 | None:intergenic | 65.0% | |
| CGCATACACAGGGTCCGGGA+AGG | + | chr7_2:55282123-55282142 | None:intergenic | 65.0% | |
| CTCCCGCATACACAGGGTCC+GGG | + | chr7_2:55282127-55282146 | None:intergenic | 65.0% | |
| GCTCCCGCATACACAGGGTC+CGG | + | chr7_2:55282128-55282147 | None:intergenic | 65.0% | |
| GCCCCTTCTTGGGGAACCGA+AGG | + | chr7_2:55282392-55282411 | None:intergenic | 65.0% | |
| ! | TCACCAGGGCGCCCCTTCTT+GGG | + | chr7_2:55282402-55282421 | None:intergenic | 65.0% |
| ! | ATCACCAGGGCGCCCCTTCT+TGG | + | chr7_2:55282403-55282422 | None:intergenic | 65.0% |
| GACCCCGGGTCATGCTAGCT+TGG | - | chr7_2:55286269-55286288 | Msa1063390:CDS | 65.0% | |
| !! | TTCCCCAAGAAGGGGCGCCC+TGG | - | chr7_2:55282396-55282415 | Msa1063390:intron | 70.0% |
| ! | CACCAGGGCGCCCCTTCTTG+GGG | + | chr7_2:55282401-55282420 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 55278900 | 55286344 | 55278900 | ID=Msa1063390;Name=Msa1063390 |
| chr7_2 | mRNA | 55278900 | 55286344 | 55278900 | ID=Msa1063390-mRNA-1;Parent=Msa1063390;Name=Msa1063390-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0|0|0.91|1|1|12|0|424 |
| chr7_2 | exon | 55286269 | 55286344 | 55286269 | ID=Msa1063390-mRNA-1:exon:10281;Parent=Msa1063390-mRNA-1 |
| chr7_2 | exon | 55283927 | 55284061 | 55283927 | ID=Msa1063390-mRNA-1:exon:10280;Parent=Msa1063390-mRNA-1 |
| chr7_2 | exon | 55283655 | 55283753 | 55283655 | ID=Msa1063390-mRNA-1:exon:10279;Parent=Msa1063390-mRNA-1 |
| chr7_2 | exon | 55282182 | 55282243 | 55282182 | ID=Msa1063390-mRNA-1:exon:10278;Parent=Msa1063390-mRNA-1 |
| chr7_2 | exon | 55281593 | 55281670 | 55281593 | ID=Msa1063390-mRNA-1:exon:10277;Parent=Msa1063390-mRNA-1 |
| chr7_2 | exon | 55281385 | 55281508 | 55281385 | ID=Msa1063390-mRNA-1:exon:10276;Parent=Msa1063390-mRNA-1 |
| chr7_2 | exon | 55281219 | 55281292 | 55281219 | ID=Msa1063390-mRNA-1:exon:10275;Parent=Msa1063390-mRNA-1 |
| chr7_2 | exon | 55281077 | 55281136 | 55281077 | ID=Msa1063390-mRNA-1:exon:10274;Parent=Msa1063390-mRNA-1 |
| chr7_2 | exon | 55280840 | 55280949 | 55280840 | ID=Msa1063390-mRNA-1:exon:10273;Parent=Msa1063390-mRNA-1 |
| chr7_2 | exon | 55280008 | 55280167 | 55280008 | ID=Msa1063390-mRNA-1:exon:10272;Parent=Msa1063390-mRNA-1 |
| chr7_2 | exon | 55279374 | 55279450 | 55279374 | ID=Msa1063390-mRNA-1:exon:10271;Parent=Msa1063390-mRNA-1 |
| chr7_2 | exon | 55278900 | 55279119 | 55278900 | ID=Msa1063390-mRNA-1:exon:10270;Parent=Msa1063390-mRNA-1 |
| chr7_2 | CDS | 55286269 | 55286344 | 55286269 | ID=Msa1063390-mRNA-1:cds;Parent=Msa1063390-mRNA-1 |
| chr7_2 | CDS | 55283927 | 55284061 | 55283927 | ID=Msa1063390-mRNA-1:cds;Parent=Msa1063390-mRNA-1 |
| chr7_2 | CDS | 55283655 | 55283753 | 55283655 | ID=Msa1063390-mRNA-1:cds;Parent=Msa1063390-mRNA-1 |
| chr7_2 | CDS | 55282182 | 55282243 | 55282182 | ID=Msa1063390-mRNA-1:cds;Parent=Msa1063390-mRNA-1 |
| chr7_2 | CDS | 55281593 | 55281670 | 55281593 | ID=Msa1063390-mRNA-1:cds;Parent=Msa1063390-mRNA-1 |
| chr7_2 | CDS | 55281385 | 55281508 | 55281385 | ID=Msa1063390-mRNA-1:cds;Parent=Msa1063390-mRNA-1 |
| chr7_2 | CDS | 55281219 | 55281292 | 55281219 | ID=Msa1063390-mRNA-1:cds;Parent=Msa1063390-mRNA-1 |
| chr7_2 | CDS | 55281077 | 55281136 | 55281077 | ID=Msa1063390-mRNA-1:cds;Parent=Msa1063390-mRNA-1 |
| chr7_2 | CDS | 55280840 | 55280949 | 55280840 | ID=Msa1063390-mRNA-1:cds;Parent=Msa1063390-mRNA-1 |
| chr7_2 | CDS | 55280008 | 55280167 | 55280008 | ID=Msa1063390-mRNA-1:cds;Parent=Msa1063390-mRNA-1 |
| chr7_2 | CDS | 55279374 | 55279450 | 55279374 | ID=Msa1063390-mRNA-1:cds;Parent=Msa1063390-mRNA-1 |
| chr7_2 | CDS | 55278900 | 55279119 | 55278900 | ID=Msa1063390-mRNA-1:cds;Parent=Msa1063390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
