Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562240 | XP_039684442.1 | 96.018 | 452 | 7 | 2 | 1 | 441 | 32 | 483 | 0.0 | 889 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562240 | sp|Q42521|DCE1_ARATH | 74.945 | 455 | 88 | 3 | 1 | 429 | 32 | 486 | 0.0 | 698 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562240 | A0A396GP61 | 96.018 | 452 | 7 | 2 | 1 | 441 | 32 | 483 | 0.0 | 889 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0067370 | Msa0562240 | -0.804126 | 2.508960e-49 | -8.615850e-47 |
| Msa0548410 | Msa0562240 | 0.810156 | 1.325980e-50 | -8.615850e-47 |
| Msa0562240 | Msa0616190 | 0.810858 | 9.351685e-51 | -8.615850e-47 |
| Msa0562240 | Msa0655590 | 0.908731 | 1.240343e-81 | -8.615850e-47 |
| Msa0562240 | Msa0699390 | 0.900419 | 7.463056e-78 | -8.615850e-47 |
| Msa0562240 | Msa0699800 | 0.800994 | 1.110067e-48 | -8.615850e-47 |
| Msa0562240 | Msa0966580 | 0.811552 | 6.614209e-51 | -8.615850e-47 |
| Msa0562240 | Msa1212150 | -0.803017 | 4.261411e-49 | -8.615850e-47 |
| Msa0562240 | Msa1212210 | -0.810145 | 1.333453e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562240 | MtrunA17_Chr8g0375301 | 96.018 | 452 | 7 | 2 | 1 | 441 | 32 | 483 | 0.0 | 889 |
| Msa0562240 | MtrunA17_Chr3g0109901 | 79.419 | 413 | 75 | 1 | 1 | 403 | 32 | 444 | 0.0 | 696 |
| Msa0562240 | MtrunA17_Chr6g0480631 | 71.365 | 447 | 110 | 2 | 1 | 437 | 35 | 473 | 0.0 | 659 |
| Msa0562240 | MtrunA17_Chr5g0433931 | 75.358 | 349 | 76 | 1 | 65 | 403 | 1 | 349 | 0.0 | 565 |
| Msa0562240 | MtrunA17_Chr5g0433921 | 77.273 | 66 | 15 | 0 | 1 | 66 | 32 | 97 | 1.19e-27 | 105 |
| Msa0562240 | MtrunA17_Chr5g0432961 | 61.250 | 80 | 31 | 0 | 331 | 410 | 13 | 92 | 5.51e-23 | 93.6 |
| Msa0562240 | MtrunA17_Chr7g0222381 | 25.210 | 357 | 235 | 9 | 52 | 392 | 159 | 499 | 2.89e-17 | 84.0 |
| Msa0562240 | MtrunA17_Chr5g0432951 | 85.714 | 35 | 5 | 0 | 218 | 252 | 22 | 56 | 5.69e-16 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562240 | AT5G17330.1 | 74.945 | 455 | 88 | 3 | 1 | 429 | 32 | 486 | 0.0 | 698 |
| Msa0562240 | AT2G02010.2 | 78.935 | 413 | 77 | 1 | 1 | 403 | 84 | 496 | 0.0 | 697 |
| Msa0562240 | AT2G02010.1 | 78.935 | 413 | 77 | 1 | 1 | 403 | 32 | 444 | 0.0 | 696 |
| Msa0562240 | AT2G02000.1 | 76.271 | 413 | 88 | 1 | 1 | 403 | 32 | 444 | 0.0 | 679 |
| Msa0562240 | AT1G65960.2 | 78.345 | 411 | 79 | 1 | 3 | 403 | 33 | 443 | 0.0 | 673 |
| Msa0562240 | AT3G17760.2 | 74.576 | 413 | 95 | 1 | 1 | 403 | 31 | 443 | 0.0 | 650 |
| Msa0562240 | AT3G17760.1 | 74.576 | 413 | 95 | 1 | 1 | 403 | 31 | 443 | 0.0 | 650 |
| Msa0562240 | AT1G65960.1 | 78.662 | 314 | 57 | 1 | 100 | 403 | 1 | 314 | 0.0 | 518 |
| Msa0562240 | AT1G65960.3 | 78.662 | 314 | 57 | 1 | 100 | 403 | 1 | 314 | 0.0 | 518 |
| Msa0562240 | AT1G65960.4 | 78.662 | 314 | 57 | 1 | 100 | 403 | 1 | 314 | 0.0 | 518 |
| Msa0562240 | AT3G17720.1 | 73.885 | 157 | 38 | 1 | 60 | 216 | 27 | 180 | 3.70e-80 | 246 |
| Msa0562240 | AT1G27980.1 | 24.370 | 357 | 238 | 9 | 50 | 390 | 160 | 500 | 7.95e-16 | 80.1 |
Find 114 sgRNAs with CRISPR-Local
Find 636 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATTGCATCTCTGATTTC+AGG | 0.153105 | 4_1:-61882012 | Msa0562240:five_prime_UTR |
| AATGAAGCAAATATAGTTAA+AGG | 0.178967 | 4_1:+61870826 | None:intergenic |
| ATTTGTGTGGCTGCAATCTT+AGG | 0.236061 | 4_1:-61872044 | Msa0562240:CDS |
| CTGGAATTGGCTGGGTAATA+TGG | 0.241921 | 4_1:-61871722 | Msa0562240:CDS |
| TGCTAATCCAAAGCTCAATT+TGG | 0.255213 | 4_1:-61873084 | Msa0562240:CDS |
| AAAACAAACTGATGCGATTC+TGG | 0.268876 | 4_1:+61881888 | None:intergenic |
| GTCTTCAGGCAAGTCTTCTT+TGG | 0.277898 | 4_1:+61871695 | None:intergenic |
| ACATTTATGCTCTTCACTAA+TGG | 0.278672 | 4_1:+61871774 | None:intergenic |
| ATCTTAGGTTCAACTTATAA+TGG | 0.297546 | 4_1:-61872029 | Msa0562240:CDS |
| TTCTGGTATGCAACTTCCTT+TGG | 0.308555 | 4_1:+61873131 | None:intergenic |
| AGAATGCAACAAGCTTATTA+TGG | 0.312579 | 4_1:-61873033 | Msa0562240:CDS |
| TTGTTTATGCTGGAATTGGC+TGG | 0.317091 | 4_1:-61871731 | Msa0562240:CDS |
| GTCGGTTATCTAGTTCTCTT+TGG | 0.340249 | 4_1:-61870907 | Msa0562240:three_prime_UTR |
| CGTTTATTCAATGCTGAGAT+TGG | 0.340889 | 4_1:-61872459 | Msa0562240:CDS |
| CATTTATGCTCTTCACTAAT+GGG | 0.341561 | 4_1:+61871775 | None:intergenic |
| ACTGACATCCGTTTGATTCC+AGG | 0.345002 | 4_1:-61881934 | Msa0562240:five_prime_UTR |
| ATTTGATTCACTAGGGTTAC+CGG | 0.346210 | 4_1:-61871365 | Msa0562240:intron |
| TGCAAGTCCTGCCAGCATTA+TGG | 0.348256 | 4_1:+61872389 | None:intergenic |
| TCCTTTGGCATTGAGTTCTC+TGG | 0.354423 | 4_1:+61873146 | None:intergenic |
| GGTCTTGTTTATGCTGGAAT+TGG | 0.360930 | 4_1:-61871735 | Msa0562240:CDS |
| CAACAAGAACTATGTCGATA+TGG | 0.361326 | 4_1:-61873003 | Msa0562240:CDS |
| AAAGAAGCCAAATTGAGCTT+TGG | 0.381094 | 4_1:+61873077 | None:intergenic |
| ATATGAAAGACAAGGTCTTC+AGG | 0.391002 | 4_1:+61871681 | None:intergenic |
| AAGGAACACTTGGAAGAAAC+TGG | 0.398886 | 4_1:-61871303 | Msa0562240:CDS |
| CTAGGGTTACCGGAGTATAA+TGG | 0.417410 | 4_1:-61871355 | Msa0562240:intron |
| AGATGTTGCGGCGCCATGGT+TGG | 0.420244 | 4_1:-61871188 | Msa0562240:CDS |
| CTTGCAGCATCAACATGAAT+AGG | 0.425888 | 4_1:+61871852 | None:intergenic |
| TACTTATATATAGGTATGTT+GGG | 0.434415 | 4_1:-61872174 | Msa0562240:intron |
| CTTCTCATTGTTAATGTTGA+GGG | 0.435794 | 4_1:+61871023 | None:intergenic |
| ATATCTTGAATTCATCGTAC+TGG | 0.437108 | 4_1:+61871214 | None:intergenic |
| ATACTTATATATAGGTATGT+TGG | 0.442768 | 4_1:-61872175 | Msa0562240:intron |
| GTCTTTCATATTAATTACCT+TGG | 0.442874 | 4_1:-61871669 | Msa0562240:CDS |
| ACCATCTCAACAGCCTTGGC+AGG | 0.444207 | 4_1:+61872080 | None:intergenic |
| TTGGCGCCAGTGACCATGTT+AGG | 0.453005 | 4_1:+61872312 | None:intergenic |
| AAGTATGGTCTTGTTTATGC+TGG | 0.458828 | 4_1:-61871741 | Msa0562240:CDS |
| CCTGAAATCAGAGATGCAAT+TGG | 0.458979 | 4_1:+61882012 | None:intergenic |
| AATGTTAGTGGCCACAAGTA+TGG | 0.459540 | 4_1:-61871756 | Msa0562240:CDS |
| GCAACTCATCGTGTATGTTC+TGG | 0.460112 | 4_1:+61873114 | None:intergenic |
| GATGTTGCGGCGCCATGGTT+GGG | 0.460975 | 4_1:-61871187 | Msa0562240:CDS |
| CAGAGATGCAATTGGAATGA+AGG | 0.461107 | 4_1:+61882020 | None:intergenic |
| GTGAAGAGCATAAATGTTAG+TGG | 0.472769 | 4_1:-61871768 | Msa0562240:CDS |
| ACCATGTTAGGCTTATCATA+AGG | 0.473882 | 4_1:+61872324 | None:intergenic |
| ACTATGATTCTCACGATACC+TGG | 0.481439 | 4_1:+61881916 | None:intergenic |
| AAAAGACAACGGTGTTCCTA+TGG | 0.494245 | 4_1:-61871262 | Msa0562240:CDS |
| GCGCCATGGTTGGGTTGTAC+CGG | 0.494423 | 4_1:-61871178 | Msa0562240:CDS |
| ACATGAAGATCAGTGGTTGC+TGG | 0.500732 | 4_1:+61872972 | None:intergenic |
| AATGAGAGTGCAGTTGGTGC+AGG | 0.507312 | 4_1:-61872432 | Msa0562240:CDS |
| GATGCAATTCTCAAATCAAA+CGG | 0.518880 | 4_1:+61881962 | None:intergenic |
| GCAGTTGGTGCAGGAACAGT+TGG | 0.519829 | 4_1:-61872423 | Msa0562240:CDS |
| ATCTACCATCTCAACAGCCT+TGG | 0.520356 | 4_1:+61872076 | None:intergenic |
| CATTAACAATGAGAAGTCCT+TGG | 0.520471 | 4_1:-61871016 | Msa0562240:CDS |
| TGTTTATGCTGGAATTGGCT+GGG | 0.526252 | 4_1:-61871730 | Msa0562240:CDS |
| TGGTGAGCACCAGGTGGCAT+TGG | 0.527542 | 4_1:+61871150 | None:intergenic |
| GGTCACTGGCGCCAACGTGC+AGG | 0.527620 | 4_1:-61872304 | Msa0562240:intron |
| GCAGAACAAACGCAAGGCTG+AGG | 0.528506 | 4_1:-61872352 | Msa0562240:CDS |
| ATCATCAGAGGCCATAATGC+TGG | 0.529716 | 4_1:-61872400 | Msa0562240:CDS |
| TCTATATCCAGAACTAGAGT+GGG | 0.532480 | 4_1:-61871808 | Msa0562240:intron |
| ACTTCTCATTGTTAATGTTG+AGG | 0.533935 | 4_1:+61871022 | None:intergenic |
| AGAAAATGCAATGGTGCTGA+AGG | 0.535815 | 4_1:-61871322 | Msa0562240:CDS |
| GTCCTTGGTTGACACTGCAT+TGG | 0.535896 | 4_1:-61871001 | Msa0562240:CDS |
| ATCAAACGGATGTCAGTGAC+AGG | 0.542005 | 4_1:+61881940 | None:intergenic |
| TTCTATATCCAGAACTAGAG+TGG | 0.542301 | 4_1:-61871809 | Msa0562240:intron |
| CAAACGGAAAAGACATTGAT+CGG | 0.545604 | 4_1:+61881978 | None:intergenic |
| GCTGTCTAGATATATATTGT+CGG | 0.545803 | 4_1:-61870925 | Msa0562240:exon |
| CCCTGCCAAGGCTGTTGAGA+TGG | 0.546836 | 4_1:-61872081 | Msa0562240:CDS |
| AATTTAGGGTGAATGTGGGT+TGG | 0.547509 | 4_1:+61871640 | None:intergenic |
| TCAAAGATGTTGCGGCGCCA+TGG | 0.548027 | 4_1:-61871192 | Msa0562240:CDS |
| CAACAAGCGTCAGAAAATCA+TGG | 0.549857 | 4_1:-61870947 | Msa0562240:CDS |
| AAGAAGAAAGAAGAAGAAAG+TGG | 0.550233 | 4_1:+61882083 | None:intergenic |
| TCACGATACCTGGAATCAAA+CGG | 0.555557 | 4_1:+61881926 | None:intergenic |
| AGTGGAATTAAGAGAAGTGA+AGG | 0.557271 | 4_1:-61872129 | Msa0562240:CDS |
| CCAGGTGGCATTGGATATGC+CGG | 0.562123 | 4_1:+61871159 | None:intergenic |
| GATAAGCCTAACATGGTCAC+TGG | 0.565474 | 4_1:-61872318 | Msa0562240:CDS |
| CCGGCATATCCAATGCCACC+TGG | 0.565866 | 4_1:-61871159 | Msa0562240:CDS |
| TCAGAGGCCATAATGCTGGC+AGG | 0.573446 | 4_1:-61872396 | Msa0562240:CDS |
| GCATTCTTCCTCCATTGATG+TGG | 0.574705 | 4_1:+61873049 | None:intergenic |
| TTGAGAGAAAATGCTACCAT+AGG | 0.582437 | 4_1:+61871246 | None:intergenic |
| TCATTGTTAATGTTGAGGGA+AGG | 0.583786 | 4_1:+61871027 | None:intergenic |
| ACTTTGATGTGGTGAGCACC+AGG | 0.585774 | 4_1:+61871141 | None:intergenic |
| CTAGGCTCACCTCTTGACCT+AGG | 0.591168 | 4_1:+61871463 | None:intergenic |
| GAGAGAAGACTACTATGTGA+TGG | 0.591910 | 4_1:-61872105 | Msa0562240:CDS |
| GGAGAAAATGAGAGTGCAGT+TGG | 0.598543 | 4_1:-61872438 | Msa0562240:CDS |
| CATACACGATGAGTTGCAGT+TGG | 0.598783 | 4_1:-61873108 | Msa0562240:CDS |
| TATGTTGGGAGAAATTTGCT+AGG | 0.601172 | 4_1:-61872160 | Msa0562240:CDS |
| ATTTGCTAGGTACTTCGAAG+TGG | 0.601208 | 4_1:-61872147 | Msa0562240:CDS |
| TCAAGATATCAAAGATGTTG+CGG | 0.603201 | 4_1:-61871200 | Msa0562240:CDS |
| TGCAGTCCTCCATTATACTC+CGG | 0.611769 | 4_1:+61871346 | None:intergenic |
| TATTATCAGCTAATTCGCCT+AGG | 0.614943 | 4_1:-61871480 | Msa0562240:CDS |
| CCATCTCAACAGCCTTGGCA+GGG | 0.615010 | 4_1:+61872081 | None:intergenic |
| GCTAATTCGCCTAGGTCAAG+AGG | 0.616664 | 4_1:-61871472 | Msa0562240:intron |
| GCCAGAGAACTCAATGCCAA+AGG | 0.620790 | 4_1:-61873147 | Msa0562240:CDS |
| CAGAACAAACGCAAGGCTGA+GGG | 0.625356 | 4_1:-61872351 | Msa0562240:CDS |
| CTATGTGATGGACCCTGCCA+AGG | 0.626832 | 4_1:-61872093 | Msa0562240:CDS |
| ATGTGGGTTGGTCTGCTCCA+AGG | 0.633972 | 4_1:+61871652 | None:intergenic |
| GAGAGACTCACAAATTACAA+AGG | 0.634025 | 4_1:+61881861 | None:intergenic |
| AATGGTGCTGAAGGAACACT+TGG | 0.634193 | 4_1:-61871313 | Msa0562240:CDS |
| ATGAAGTACATGAAGATCAG+TGG | 0.652637 | 4_1:+61872965 | None:intergenic |
| ATCCAATGCAGTGTCAACCA+AGG | 0.653470 | 4_1:+61870999 | None:intergenic |
| AACATACTCTCAAAAGACAA+CGG | 0.655933 | 4_1:-61871273 | Msa0562240:CDS |
| GAATTGGCTGGGTAATATGG+AGG | 0.658825 | 4_1:-61871719 | Msa0562240:CDS |
| GGTAATTAATATGAAAGACA+AGG | 0.662107 | 4_1:+61871673 | None:intergenic |
| AGGAACAGTTGGATCATCAG+AGG | 0.663142 | 4_1:-61872412 | Msa0562240:CDS |
| GAAGTGGCAGAACAAACGCA+AGG | 0.664144 | 4_1:-61872358 | Msa0562240:CDS |
| ACCTTATGATAAGCCTAACA+TGG | 0.664683 | 4_1:-61872325 | Msa0562240:CDS |
| CATAAACAAGACCATACTTG+TGG | 0.667811 | 4_1:+61871745 | None:intergenic |
| ATGCCGGTACAACCCAACCA+TGG | 0.683668 | 4_1:+61871175 | None:intergenic |
| ATTCATGTTGATGCTGCAAG+TGG | 0.685382 | 4_1:-61871849 | Msa0562240:intron |
| GAGAATGAATACCTGCACGT+TGG | 0.695238 | 4_1:+61872293 | None:intergenic |
| GGGTTACCGGAGTATAATGG+AGG | 0.701652 | 4_1:-61871352 | Msa0562240:CDS |
| CCACATCAAAGTGCTTCGTG+CGG | 0.707190 | 4_1:-61871130 | Msa0562240:CDS |
| AGATGAGAACACAATTTGTG+TGG | 0.728333 | 4_1:-61872057 | Msa0562240:CDS |
| CCGCACGAAGCACTTTGATG+TGG | 0.733476 | 4_1:+61871130 | None:intergenic |
| GGACTGCAGAGAAAATGCAA+TGG | 0.739159 | 4_1:-61871331 | Msa0562240:CDS |
| TTGATGTGGTGAGCACCAGG+TGG | 0.782364 | 4_1:+61871144 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATAAATAAATAAATAA+AGG | - | chr4_1:61877813-61877832 | Msa0562240:intron | 0.0% |
| !! | TAAATAAATAAATAAATAAA+GGG | - | chr4_1:61877814-61877833 | Msa0562240:intron | 0.0% |
| !! | TTATTTATTTATTTATTTAT+GGG | + | chr4_1:61878128-61878147 | None:intergenic | 0.0% |
| !! | TTTATTTATTTATTTATTTA+TGG | + | chr4_1:61877814-61877833 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr4_1:61878152-61878171 | Msa0562240:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr4_1:61878153-61878172 | Msa0562240:intron | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr4_1:61878152-61878171 | None:intergenic | 0.0% |
| !! | TTATGAAAAAAAAATAAGAA+TGG | + | chr4_1:61874609-61874628 | None:intergenic | 10.0% |
| !! | TGTATAATTGAAATATAATT+CGG | + | chr4_1:61875223-61875242 | None:intergenic | 10.0% |
| !!! | ATAAAAATATTTTCTTTTAG+AGG | + | chr4_1:61876368-61876387 | None:intergenic | 10.0% |
| !!! | TTTATTCTCTATATAAATTT+TGG | - | chr4_1:61879704-61879723 | Msa0562240:intron | 10.0% |
| !! | AAGTTTATATTTACAAATGA+TGG | - | chr4_1:61872087-61872106 | Msa0562240:CDS | 15.0% |
| !! | ATTATGATGTATCAAATAAT+AGG | - | chr4_1:61872569-61872588 | Msa0562240:intron | 15.0% |
| !!! | AAATTATTTTCTTCATCTAA+AGG | + | chr4_1:61873025-61873044 | None:intergenic | 15.0% |
| !!! | TTCACTATAATGTTTTTTTT+AGG | + | chr4_1:61875055-61875074 | None:intergenic | 15.0% |
| !! | AAAAATAATACAAGTCATAT+AGG | - | chr4_1:61875093-61875112 | Msa0562240:intron | 15.0% |
| !! | AAAATAATACAAGTCATATA+GGG | - | chr4_1:61875094-61875113 | Msa0562240:intron | 15.0% |
| !!! | TACTTATTTTTTAGTCTAAT+TGG | + | chr4_1:61875133-61875152 | None:intergenic | 15.0% |
| !!! | GTTTTCATTTTTTATTGAAT+TGG | + | chr4_1:61875650-61875669 | None:intergenic | 15.0% |
| !! | AATCATTCAATCTAATAAAA+AGG | - | chr4_1:61875923-61875942 | Msa0562240:intron | 15.0% |
| !! | ATCATTCAATCTAATAAAAA+GGG | - | chr4_1:61875924-61875943 | Msa0562240:intron | 15.0% |
| !!! | ATTTTGAATTGAATTAAGTA+GGG | + | chr4_1:61875997-61876016 | None:intergenic | 15.0% |
| !! | TGAGTCAAAAAAATAAATTA+TGG | + | chr4_1:61876297-61876316 | None:intergenic | 15.0% |
| !!! | AAATTTTAATATTGATCACA+CGG | + | chr4_1:61876853-61876872 | None:intergenic | 15.0% |
| !!! | ATCTTTAATTTTGATTACTA+TGG | + | chr4_1:61876954-61876973 | None:intergenic | 15.0% |
| !!! | GTTTAATCTATTTTCTATTT+CGG | + | chr4_1:61877602-61877621 | None:intergenic | 15.0% |
| !! | TCAAATTATATGTATGAATA+TGG | - | chr4_1:61877719-61877738 | Msa0562240:intron | 15.0% |
| !!! | TGTTTAGAAATGTTTTTTTT+AGG | + | chr4_1:61878609-61878628 | None:intergenic | 15.0% |
| !!! | AAAGTTATTGATGTTTTTTT+AGG | - | chr4_1:61878764-61878783 | Msa0562240:intron | 15.0% |
| !!! | AAGTTATTGATGTTTTTTTA+GGG | - | chr4_1:61878765-61878784 | Msa0562240:intron | 15.0% |
| !!! | CAAAAAAATATCCATATTTT+GGG | + | chr4_1:61878819-61878838 | None:intergenic | 15.0% |
| !!! | ACAAAAAAATATCCATATTT+TGG | + | chr4_1:61878820-61878839 | None:intergenic | 15.0% |
| !! | ATGTCAAATAGAAAAATATA+GGG | + | chr4_1:61878971-61878990 | None:intergenic | 15.0% |
| !!! | TTATTTTTTCTTTCAGATTT+TGG | + | chr4_1:61879194-61879213 | None:intergenic | 15.0% |
| !!! | TTTAGTTTTATTTTTACAGT+GGG | + | chr4_1:61879261-61879280 | None:intergenic | 15.0% |
| !! | AAGTAATTTATATATTACCT+AGG | + | chr4_1:61879628-61879647 | None:intergenic | 15.0% |
| !! | GAAAAAATACTAATTTAAGA+TGG | + | chr4_1:61880037-61880056 | None:intergenic | 15.0% |
| !!! | ATTTAATTTATATACACTAC+TGG | - | chr4_1:61880090-61880109 | Msa0562240:intron | 15.0% |
| !! | ATGATTTAATAGTATTTAGT+TGG | - | chr4_1:61880313-61880332 | Msa0562240:intron | 15.0% |
| !! | TACATATATGATAATCAATA+TGG | - | chr4_1:61880653-61880672 | Msa0562240:intron | 15.0% |
| !!! | AGTTTTGTATACTTATATAT+AGG | - | chr4_1:61880739-61880758 | Msa0562240:intron | 15.0% |
| !! | ATAAAAAAGCTTATTGTATA+TGG | + | chr4_1:61881363-61881382 | None:intergenic | 15.0% |
| !! | TAACAAAAACTAGTTAATTA+AGG | + | chr4_1:61882056-61882075 | None:intergenic | 15.0% |
| !!! | GGTTTTAAATTTGTTTTCAA+AGG | - | chr4_1:61872315-61872334 | Msa0562240:CDS | 20.0% |
| !!! | TTATCATTTTGTTTTAACGA+TGG | + | chr4_1:61872995-61873014 | None:intergenic | 20.0% |
| !!! | ATAAAGTGCTTATATCATTT+TGG | + | chr4_1:61873103-61873122 | None:intergenic | 20.0% |
| !!! | TGCTTATATCATTTTTGTAT+AGG | + | chr4_1:61873163-61873182 | None:intergenic | 20.0% |
| !! | TGTATTTGCAAACATTTATT+CGG | + | chr4_1:61873371-61873390 | None:intergenic | 20.0% |
| !! | TTCATCATAAATTAAAGCAT+AGG | - | chr4_1:61874005-61874024 | Msa0562240:intron | 20.0% |
| !! | AATTAAAGCATAGGTAAAAA+TGG | - | chr4_1:61874014-61874033 | Msa0562240:intron | 20.0% |
| !!! | TAAATATTTGAGACACATTT+GGG | + | chr4_1:61875302-61875321 | None:intergenic | 20.0% |
| !!! | ATAAATATTTGAGACACATT+TGG | + | chr4_1:61875303-61875322 | None:intergenic | 20.0% |
| !! | AAATGAAGAAATTGAAACTA+AGG | - | chr4_1:61875469-61875488 | Msa0562240:intron | 20.0% |
| !! | AATGAAGAAATTGAAACTAA+GGG | - | chr4_1:61875470-61875489 | Msa0562240:intron | 20.0% |
| !!! | GATTTTGAATTGAATTAAGT+AGG | + | chr4_1:61875998-61876017 | None:intergenic | 20.0% |
| !!! | AAATCATGATGAAAGTTTTT+TGG | - | chr4_1:61876013-61876032 | Msa0562240:intron | 20.0% |
| !!! | AATCATGATGAAAGTTTTTT+GGG | - | chr4_1:61876014-61876033 | Msa0562240:intron | 20.0% |
| !! | ACTGGTATTAAATTCTTATT+AGG | - | chr4_1:61876441-61876460 | Msa0562240:intron | 20.0% |
| !! | ATTAAATTCTTATTAGGACT+TGG | - | chr4_1:61876447-61876466 | Msa0562240:intron | 20.0% |
| !!! | AACATATATAACTTGTTCTT+TGG | + | chr4_1:61876559-61876578 | None:intergenic | 20.0% |
| !!! | ATAAATTTGTTTTTTCGCAA+AGG | - | chr4_1:61876751-61876770 | Msa0562240:intron | 20.0% |
| !!! | TTAGAAATGTTTTTTTTAGG+TGG | + | chr4_1:61878606-61878625 | None:intergenic | 20.0% |
| !!! | AGTTATTGATGTTTTTTTAG+GGG | - | chr4_1:61878766-61878785 | Msa0562240:intron | 20.0% |
| !! | TGTATATTAAACCCAAAATA+TGG | - | chr4_1:61878805-61878824 | Msa0562240:intron | 20.0% |
| !!! | CTTTTTATTTATTATCACCA+TGG | - | chr4_1:61878845-61878864 | Msa0562240:intron | 20.0% |
| !! | CATGTCAAATAGAAAAATAT+AGG | + | chr4_1:61878972-61878991 | None:intergenic | 20.0% |
| !! | AAGATGTAGCAAATTAAATA+TGG | - | chr4_1:61879045-61879064 | Msa0562240:intron | 20.0% |
| !! | TGGTAGAATAAAAATTCTAT+TGG | + | chr4_1:61879114-61879133 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTAAGAGAATACA+TGG | + | chr4_1:61879134-61879153 | None:intergenic | 20.0% |
| !!! | CTTTAGTTTTATTTTTACAG+TGG | + | chr4_1:61879262-61879281 | None:intergenic | 20.0% |
| !! | ATAGAAAAATGTGTTATGTA+AGG | + | chr4_1:61879476-61879495 | None:intergenic | 20.0% |
| !! | GAAGTGTATAATAATATGTT+AGG | + | chr4_1:61879521-61879540 | None:intergenic | 20.0% |
| !! | TATTATTATACACTTCATCA+TGG | - | chr4_1:61879525-61879544 | Msa0562240:intron | 20.0% |
| !!! | ATTCTCTATATAAATTTTGG+TGG | - | chr4_1:61879707-61879726 | Msa0562240:intron | 20.0% |
| !!! | TTCTCTATATAAATTTTGGT+GGG | - | chr4_1:61879708-61879727 | Msa0562240:intron | 20.0% |
| !!! | TCATTTATGTTTTGTTTTAC+TGG | - | chr4_1:61880405-61880424 | Msa0562240:intron | 20.0% |
| !! | ATAATCAATATGGCATTAAA+AGG | - | chr4_1:61880663-61880682 | Msa0562240:intron | 20.0% |
| !! | ATACTTATATATAGGTATGT+TGG | - | chr4_1:61880747-61880766 | Msa0562240:intron | 20.0% |
| !! | TACTTATATATAGGTATGTT+GGG | - | chr4_1:61880748-61880767 | Msa0562240:intron | 20.0% |
| !!! | TTCACCTTTTGAAAAATTTA+GGG | + | chr4_1:61881299-61881318 | None:intergenic | 20.0% |
| !!! | ATTCACCTTTTGAAAAATTT+AGG | + | chr4_1:61881300-61881319 | None:intergenic | 20.0% |
| ! | TGTATATAGTGATACATATG+AGG | - | chr4_1:61871242-61871261 | Msa0562240:CDS | 25.0% |
| ! | AAACATTACATAAGACTTTG+TGG | + | chr4_1:61871546-61871565 | None:intergenic | 25.0% |
| ! | TTTCACTTCATTCTTTCTTA+CGG | + | chr4_1:61871588-61871607 | None:intergenic | 25.0% |
| ! | TCAATTAGTATGCAATACAT+AGG | - | chr4_1:61871636-61871655 | Msa0562240:CDS | 25.0% |
| ! | CAATTAGTATGCAATACATA+GGG | - | chr4_1:61871637-61871656 | Msa0562240:CDS | 25.0% |
| ! | TTCCTATTTATCGTAAATTG+AGG | - | chr4_1:61871834-61871853 | Msa0562240:intron | 25.0% |
| ! | TCCTATTTATCGTAAATTGA+GGG | - | chr4_1:61871835-61871854 | Msa0562240:intron | 25.0% |
| ! | TATATCCACTAAAAATGACA+CGG | + | chr4_1:61874055-61874074 | None:intergenic | 25.0% |
| !! | CAAAAATAATTGTTTCTCCA+TGG | + | chr4_1:61872253-61872272 | None:intergenic | 25.0% |
| !! | TTTTGGATGTTTGTCATAAA+TGG | + | chr4_1:61872341-61872360 | None:intergenic | 25.0% |
| !! | CATTCAAATTCAAACTTTTC+AGG | + | chr4_1:61872532-61872551 | None:intergenic | 25.0% |
| ! | CTGAAAAGTTTGAATTTGAA+TGG | - | chr4_1:61872530-61872549 | Msa0562240:intron | 25.0% |
| ! | ATGATGTATCAAATAATAGG+TGG | - | chr4_1:61872572-61872591 | Msa0562240:intron | 25.0% |
| ! | TGATGTATCAAATAATAGGT+GGG | - | chr4_1:61872573-61872592 | Msa0562240:intron | 25.0% |
| ! | AATTATGCAAGAAATCCATA+AGG | + | chr4_1:61872735-61872754 | None:intergenic | 25.0% |
| ! | TGTATTTGCAAACCATTATT+CGG | - | chr4_1:61872902-61872921 | Msa0562240:intron | 25.0% |
| ! | TTGTAATAGTAATATCAGAC+AGG | - | chr4_1:61873047-61873066 | Msa0562240:CDS | 25.0% |
| !!! | ATATCATTTTTGTATAGGCA+AGG | + | chr4_1:61873158-61873177 | None:intergenic | 25.0% |
| !!! | AAGTTATTTTCTTCATCCAA+AGG | - | chr4_1:61873248-61873267 | Msa0562240:intron | 25.0% |
| ! | AAATGATGATAAAAAGCCTT+TGG | + | chr4_1:61873267-61873286 | None:intergenic | 25.0% |
| ! | AGAAAACAAACACAAAATGA+CGG | + | chr4_1:61873335-61873354 | None:intergenic | 25.0% |
| ! | TCATTGAGATGTAAAAACAA+CGG | - | chr4_1:61873396-61873415 | Msa0562240:intron | 25.0% |
| ! | ATTCTGATGTATCAAACAAT+AGG | + | chr4_1:61873711-61873730 | None:intergenic | 25.0% |
| !!! | AAACTCATTGTCATTTTTAG+TGG | + | chr4_1:61874063-61874082 | None:intergenic | 25.0% |
| ! | AAGGGTTAAAATAAAAGATG+GGG | + | chr4_1:61874275-61874294 | None:intergenic | 25.0% |
| ! | CAAGGGTTAAAATAAAAGAT+GGG | + | chr4_1:61874276-61874295 | None:intergenic | 25.0% |
| ! | AAAGGACTTGTATAATTTCA+CGG | + | chr4_1:61874308-61874327 | None:intergenic | 25.0% |
| !!! | GGTTTTTTTATAGGTGAAAA+GGG | + | chr4_1:61874358-61874377 | None:intergenic | 25.0% |
| !!! | CATATCTTGGGTTTTTTTAT+AGG | + | chr4_1:61874367-61874386 | None:intergenic | 25.0% |
| ! | TTCATTTGATTCCTAATTAC+CGG | + | chr4_1:61874453-61874472 | None:intergenic | 25.0% |
| !! | ACAACTTTGTTTGTAAGAAT+TGG | + | chr4_1:61874530-61874549 | None:intergenic | 25.0% |
| ! | GCTATGATTAGATATATGTA+AGG | + | chr4_1:61875158-61875177 | None:intergenic | 25.0% |
| ! | AAAGAGCAAAGAGAATTAAT+TGG | - | chr4_1:61875594-61875613 | Msa0562240:intron | 25.0% |
| !!! | AAAAAGTGAACATTTTGACT+CGG | - | chr4_1:61875623-61875642 | Msa0562240:intron | 25.0% |
| ! | ATATCGAAAACCAAAAGAAA+TGG | - | chr4_1:61875971-61875990 | Msa0562240:intron | 25.0% |
| !!! | ATCATGATGAAAGTTTTTTG+GGG | - | chr4_1:61876015-61876034 | Msa0562240:intron | 25.0% |
| ! | TGAAATGTTGTTCATTAACA+TGG | + | chr4_1:61876079-61876098 | None:intergenic | 25.0% |
| ! | GAACAACATTTCATACTATA+AGG | - | chr4_1:61876086-61876105 | Msa0562240:intron | 25.0% |
| ! | TTCTTTATGAGTTCAACAAA+AGG | + | chr4_1:61876146-61876165 | None:intergenic | 25.0% |
| ! | CAAACTAATGAAACTTTAAC+CGG | - | chr4_1:61876683-61876702 | Msa0562240:intron | 25.0% |
| ! | AACAAATATTCCAAGCTAAA+TGG | + | chr4_1:61876726-61876745 | None:intergenic | 25.0% |
| ! | TTCATTAACAATGTTTCACT+TGG | - | chr4_1:61877269-61877288 | Msa0562240:intron | 25.0% |
| ! | GCTAACATGGTATTTAAATA+TGG | + | chr4_1:61877303-61877322 | None:intergenic | 25.0% |
| !! | ACATTGAGTTGTTAAATCTA+AGG | + | chr4_1:61877348-61877367 | None:intergenic | 25.0% |
| ! | TGATATATGAAGAAAACATG+TGG | - | chr4_1:61877504-61877523 | Msa0562240:intron | 25.0% |
| !!! | TGTTGGTGATAAATTCTATT+GGG | + | chr4_1:61877576-61877595 | None:intergenic | 25.0% |
| !!! | TTGTTGGTGATAAATTCTAT+TGG | + | chr4_1:61877577-61877596 | None:intergenic | 25.0% |
| !! | ATTTTCTATTTCGGTATTGT+TGG | + | chr4_1:61877593-61877612 | None:intergenic | 25.0% |
| ! | GCAAGTAAATAACTAAAAAG+TGG | - | chr4_1:61877881-61877900 | Msa0562240:intron | 25.0% |
| ! | GCAAGTAAATAACTAAAAAG+TGG | - | chr4_1:61877881-61877900 | Msa0562240:intron | 25.0% |
| ! | AAAGTGAAAATCACATCTTA+AGG | + | chr4_1:61878242-61878261 | None:intergenic | 25.0% |
| ! | ATAAAAGACACCTTCATAAA+AGG | - | chr4_1:61878339-61878358 | Msa0562240:intron | 25.0% |
| ! | ATTAAGGATAAATGAGTTGT+AGG | - | chr4_1:61878680-61878699 | Msa0562240:intron | 25.0% |
| !! | TTCTTGTTTAGATTTGAAGT+CGG | + | chr4_1:61878708-61878727 | None:intergenic | 25.0% |
| ! | TTGAGTGTATATATATTCCA+TGG | + | chr4_1:61878865-61878884 | None:intergenic | 25.0% |
| ! | AAATAGAAAAATATAGGGCA+GGG | + | chr4_1:61878966-61878985 | None:intergenic | 25.0% |
| ! | GTTACTGTACATGTAAAAAT+TGG | - | chr4_1:61879223-61879242 | Msa0562240:intron | 25.0% |
| !!! | TTTTATTTTTACAGTGGGTA+AGG | + | chr4_1:61879256-61879275 | None:intergenic | 25.0% |
| ! | CTAGAAGATAAAAAGAATGT+AGG | + | chr4_1:61879291-61879310 | None:intergenic | 25.0% |
| ! | GATTTGATGAAGAATGAAAA+GGG | + | chr4_1:61879420-61879439 | None:intergenic | 25.0% |
| ! | TGATTTGATGAAGAATGAAA+AGG | + | chr4_1:61879421-61879440 | None:intergenic | 25.0% |
| ! | TCAAATCAAACATACAGAAA+AGG | - | chr4_1:61879433-61879452 | Msa0562240:intron | 25.0% |
| !!! | GTAAGGTGTTTATTTTCTTT+TGG | + | chr4_1:61879459-61879478 | None:intergenic | 25.0% |
| ! | TAAAGTTAGAGTGAAGAATA+AGG | + | chr4_1:61879579-61879598 | None:intergenic | 25.0% |
| !!! | TCTCTATATAAATTTTGGTG+GGG | - | chr4_1:61879709-61879728 | Msa0562240:intron | 25.0% |
| ! | ACATATAGTAACTAGAAGAA+TGG | + | chr4_1:61879990-61880009 | None:intergenic | 25.0% |
| !! | TTCTTCTAGTTACTATATGT+TGG | - | chr4_1:61879990-61880009 | Msa0562240:intron | 25.0% |
| ! | TGTCATTCTCATTAAATATG+TGG | - | chr4_1:61880185-61880204 | Msa0562240:intron | 25.0% |
| ! | TATAAGCTGGATATCATAAA+GGG | + | chr4_1:61880285-61880304 | None:intergenic | 25.0% |
| ! | ATCATACATATTCTATAAGC+TGG | + | chr4_1:61880298-61880317 | None:intergenic | 25.0% |
| ! | TTTAGTTGGAAATTAAAGCT+AGG | - | chr4_1:61880327-61880346 | Msa0562240:intron | 25.0% |
| ! | GATCACTTTCATATTACAAA+AGG | + | chr4_1:61880376-61880395 | None:intergenic | 25.0% |
| ! | ATCTTAGGTTCAACTTATAA+TGG | - | chr4_1:61880893-61880912 | Msa0562240:intron | 25.0% |
| ! | TTAGAAAAAAACAAGCAAAC+TGG | - | chr4_1:61880953-61880972 | Msa0562240:intron | 25.0% |
| ! | TAGAAAAAAACAAGCAAACT+GGG | - | chr4_1:61880954-61880973 | Msa0562240:intron | 25.0% |
| ! | TACACTTATCAATTTGTAGA+TGG | - | chr4_1:61881041-61881060 | Msa0562240:intron | 25.0% |
| ! | ACACTTATCAATTTGTAGAT+GGG | - | chr4_1:61881042-61881061 | Msa0562240:intron | 25.0% |
| ! | GGTAATTAATATGAAAGACA+AGG | + | chr4_1:61881252-61881271 | None:intergenic | 25.0% |
| ! | GTCTTTCATATTAATTACCT+TGG | - | chr4_1:61881253-61881272 | Msa0562240:intron | 25.0% |
| !!! | TTCACCCTAAATTTTTCAAA+AGG | - | chr4_1:61881292-61881311 | Msa0562240:intron | 25.0% |
| ! | CAAAATAAAATAGATTCCCT+AGG | + | chr4_1:61881480-61881499 | None:intergenic | 25.0% |
| AAGAAGAAAGAAGAAGAAAG+TGG | + | chr4_1:61870842-61870861 | None:intergenic | 30.0% | |
| GATGCAATTCTCAAATCAAA+CGG | + | chr4_1:61870963-61870982 | None:intergenic | 30.0% | |
| GTATCACTATATACATCAAG+AGG | + | chr4_1:61871237-61871256 | None:intergenic | 30.0% | |
| ATATAGTGATACATATGAGG+TGG | - | chr4_1:61871245-61871264 | Msa0562240:CDS | 30.0% | |
| ATGATGTTGACACTGATATA+TGG | - | chr4_1:61871319-61871338 | Msa0562240:CDS | 30.0% | |
| ! | ATGATGATGATGATGATGTA+AGG | - | chr4_1:61871492-61871511 | Msa0562240:CDS | 30.0% |
| ! | TGATGATGATGATGATGTAA+GGG | - | chr4_1:61871493-61871512 | Msa0562240:CDS | 30.0% |
| ! | AATACATAGGGTGTTAATGA+TGG | - | chr4_1:61871649-61871668 | Msa0562240:CDS | 30.0% |
| TCCCTCAATTTACGATAAAT+AGG | + | chr4_1:61871839-61871858 | None:intergenic | 30.0% | |
| !!! | TCATATCTTCGGTTTTTTGA+TGG | - | chr4_1:61871910-61871929 | Msa0562240:intron | 30.0% |
| !!! | CATATCTTCGGTTTTTTGAT+GGG | - | chr4_1:61871911-61871930 | Msa0562240:intron | 30.0% |
| ! | GCCCAAACAAAATAGTTTTT+GGG | - | chr4_1:61872112-61872131 | Msa0562240:CDS | 30.0% |
| !! | GCCCAAAAACTATTTTGTTT+GGG | + | chr4_1:61872116-61872135 | None:intergenic | 30.0% |
| ! | TGCCCAAAAACTATTTTGTT+TGG | + | chr4_1:61872117-61872136 | None:intergenic | 30.0% |
| !! | ATACCTGTTATTTCTATAGG+TGG | + | chr4_1:61874086-61874105 | None:intergenic | 30.0% |
| ACCTATAGAAATAACAGGTA+TGG | - | chr4_1:61872194-61872213 | Msa0562240:intron | 30.0% | |
| !! | TCCATACCTGTTATTTCTAT+AGG | + | chr4_1:61874083-61874102 | None:intergenic | 30.0% |
| ATATCCACTAAAAATGACAC+GGG | + | chr4_1:61872225-61872244 | None:intergenic | 30.0% | |
| ! | AAATAATTGTTTCTCCATGG+AGG | + | chr4_1:61872250-61872269 | None:intergenic | 30.0% |
| TTATGACAAACATCCAAAAG+CGG | - | chr4_1:61872342-61872361 | Msa0562240:CDS | 30.0% | |
| AAGTTGTGTTTCCATATACA+AGG | - | chr4_1:61872404-61872423 | Msa0562240:CDS | 30.0% | |
| !!! | AGTATTTTGATGCAAATTCC+AGG | + | chr4_1:61872443-61872462 | None:intergenic | 30.0% |
| !!! | TCAAACTTTTCAGGTGTATA+AGG | + | chr4_1:61872523-61872542 | None:intergenic | 30.0% |
| AGTTTGAATTTGAATGGAAG+AGG | - | chr4_1:61872536-61872555 | Msa0562240:intron | 30.0% | |
| GTTTGAATTTGAATGGAAGA+GGG | - | chr4_1:61872537-61872556 | Msa0562240:intron | 30.0% | |
| ! | AAATGAAACTTATCGGTTGA+CGG | - | chr4_1:61872597-61872616 | Msa0562240:intron | 30.0% |
| CACTAATTCACTGTGATAAA+GGG | + | chr4_1:61872884-61872903 | None:intergenic | 30.0% | |
| ACACTAATTCACTGTGATAA+AGG | + | chr4_1:61872885-61872904 | None:intergenic | 30.0% | |
| TTGCAAACATTTATTCGGTA+TGG | + | chr4_1:61873366-61873385 | None:intergenic | 30.0% | |
| AAATTATGCAAGAAATCCTC+AGG | - | chr4_1:61873543-61873562 | Msa0562240:intron | 30.0% | |
| AATTATGCAAGAAATCCTCA+GGG | - | chr4_1:61873544-61873563 | Msa0562240:intron | 30.0% | |
| TTATCAGTTGAAGAGAATGT+GGG | + | chr4_1:61873674-61873693 | None:intergenic | 30.0% | |
| TTCTTCTTATACACCTGAAA+AGG | + | chr4_1:61873764-61873783 | None:intergenic | 30.0% | |
| TGACATTTGCATTGAAATGT+TGG | + | chr4_1:61873838-61873857 | None:intergenic | 30.0% | |
| AACATTTCAATGCAAATGTC+AGG | - | chr4_1:61873837-61873856 | Msa0562240:intron | 30.0% | |
| AAAAGTGATGATTACTGATG+GGG | + | chr4_1:61873923-61873942 | None:intergenic | 30.0% | |
| CAAAAGTGATGATTACTGAT+GGG | + | chr4_1:61873924-61873943 | None:intergenic | 30.0% | |
| ! | TTTTGGATGTTTGTCATACA+TGG | - | chr4_1:61873939-61873958 | Msa0562240:intron | 30.0% |
| !! | TAAAAATGGTTGTTTCTCCA+TGG | - | chr4_1:61874028-61874047 | Msa0562240:intron | 30.0% |
| !! | TCCATACCTGTTATTTCTAT+AGG | - | chr4_1:61874083-61874102 | Msa0562240:intron | 30.0% |
| ! | TAGGTTTGACTATGAGTTTT+TGG | + | chr4_1:61874132-61874151 | None:intergenic | 30.0% |
| TCTGCCCAAAAAAAATTTCT+AGG | - | chr4_1:61874161-61874180 | Msa0562240:intron | 30.0% | |
| !!! | GACGCCTAGAAATTTTTTTT+GGG | + | chr4_1:61874168-61874187 | None:intergenic | 30.0% |
| GAGTGTACATTTACAAATGA+TGG | + | chr4_1:61874190-61874209 | None:intergenic | 30.0% | |
| ! | TCTACTTTGAGTTTCTTCAA+GGG | + | chr4_1:61874244-61874263 | None:intergenic | 30.0% |
| ! | TTCTACTTTGAGTTTCTTCA+AGG | + | chr4_1:61874245-61874264 | None:intergenic | 30.0% |
| GCAAGGGTTAAAATAAAAGA+TGG | + | chr4_1:61874277-61874296 | None:intergenic | 30.0% | |
| !!! | TTTTTTATAGGTGAAAAGGG+TGG | + | chr4_1:61874355-61874374 | None:intergenic | 30.0% |
| !!! | GGGTTTTTTTATAGGTGAAA+AGG | + | chr4_1:61874359-61874378 | None:intergenic | 30.0% |
| ! | GTTGATAAACAAGTTGTTAG+TGG | + | chr4_1:61874418-61874437 | None:intergenic | 30.0% |
| TATCAACTTCACTCAATTTC+CGG | - | chr4_1:61874431-61874450 | Msa0562240:intron | 30.0% | |
| CAACTAGTATGCAATAAAGA+GGG | + | chr4_1:61874638-61874657 | None:intergenic | 30.0% | |
| TCAACTAGTATGCAATAAAG+AGG | + | chr4_1:61874639-61874658 | None:intergenic | 30.0% | |
| TTTCACTTCATCCTTTCTTA+CGG | - | chr4_1:61874688-61874707 | Msa0562240:intron | 30.0% | |
| GAAGATATAGAAGTCAACAA+GGG | + | chr4_1:61874917-61874936 | None:intergenic | 30.0% | |
| TGAAGATATAGAAGTCAACA+AGG | + | chr4_1:61874918-61874937 | None:intergenic | 30.0% | |
| TGTACATAGTGATACAGATA+AGG | + | chr4_1:61874984-61875003 | None:intergenic | 30.0% | |
| TTGAAAGATCATGGAGAATA+TGG | + | chr4_1:61875279-61875298 | None:intergenic | 30.0% | |
| !!! | TAGTTTTGTCAAACACAACA+TGG | + | chr4_1:61875361-61875380 | None:intergenic | 30.0% |
| !! | CTTATTTTCACGTTTGATTC+AGG | + | chr4_1:61875422-61875441 | None:intergenic | 30.0% |
| ! | GTGGTTTTCTTATATTTGCA+TGG | + | chr4_1:61875874-61875893 | None:intergenic | 30.0% |
| !!! | ATTTTTTTGACACCTCATGT+TGG | + | chr4_1:61875906-61875925 | None:intergenic | 30.0% |
| CATTTCATACTATAAGGTTG+TGG | - | chr4_1:61876092-61876111 | Msa0562240:intron | 30.0% | |
| ! | TCAACAAAAGGACTTTGAAA+AGG | + | chr4_1:61876134-61876153 | None:intergenic | 30.0% |
| ATATTTCGTGTGCTTTACTA+TGG | + | chr4_1:61876329-61876348 | None:intergenic | 30.0% | |
| GAATTTACTACCTAACAACA+CGG | - | chr4_1:61876418-61876437 | Msa0562240:intron | 30.0% | |
| AAAACTTCTGATCTTGGATA+TGG | + | chr4_1:61876474-61876493 | None:intergenic | 30.0% | |
| GTAAAGAAAACTTCTGATCT+TGG | + | chr4_1:61876480-61876499 | None:intergenic | 30.0% | |
| !! | TAACTTGTTCTTTGGTTACT+AGG | + | chr4_1:61876551-61876570 | None:intergenic | 30.0% |
| CGGTTAAAGTTTCATTAGTT+TGG | + | chr4_1:61876685-61876704 | None:intergenic | 30.0% | |
| ! | CTTTAACCGGTGTTAAATTA+AGG | - | chr4_1:61876696-61876715 | Msa0562240:intron | 30.0% |
| CAGAATGAAAAGTCGTATAA+AGG | - | chr4_1:61876918-61876937 | Msa0562240:intron | 30.0% | |
| ! | AAAGATCTAAAGTGAGAATG+TGG | - | chr4_1:61877101-61877120 | Msa0562240:intron | 30.0% |
| !!! | TTTGTTTTGACTATTGTAGC+GGG | + | chr4_1:61877547-61877566 | None:intergenic | 30.0% |
| !!! | GTTTGTTTTGACTATTGTAG+CGG | + | chr4_1:61877548-61877567 | None:intergenic | 30.0% |
| ! | ATCCAGGAATTTTGTAAAGT+GGG | - | chr4_1:61877762-61877781 | Msa0562240:intron | 30.0% |
| TTATAGCAACATACACCTTA+GGG | + | chr4_1:61877916-61877935 | None:intergenic | 30.0% | |
| ACCTTCTAACAAAAACAAGT+GGG | - | chr4_1:61877939-61877958 | Msa0562240:intron | 30.0% | |
| AAGTGGTTAATTACATCCTA+AGG | - | chr4_1:61878047-61878066 | Msa0562240:intron | 30.0% | |
| ACTCCCACATAAAAAATAGT+GGG | - | chr4_1:61878087-61878106 | Msa0562240:intron | 30.0% | |
| !!! | ACACCCACTATTTTTTATGT+GGG | + | chr4_1:61878093-61878112 | None:intergenic | 30.0% |
| ACACCTTCATAAAAGTAAGT+TGG | - | chr4_1:61878284-61878303 | Msa0562240:intron | 30.0% | |
| !! | ACACCAACTTACTTTTATGA+AGG | + | chr4_1:61878290-61878309 | None:intergenic | 30.0% |
| ! | ATAGAAGACACCTTTTATGA+AGG | + | chr4_1:61878352-61878371 | None:intergenic | 30.0% |
| !! | ATAAAAGTGTTGTTGTGTCA+AGG | - | chr4_1:61878462-61878481 | Msa0562240:intron | 30.0% |
| CTCATTTATCCTTAATTCCA+GGG | + | chr4_1:61878676-61878695 | None:intergenic | 30.0% | |
| ACTCATTTATCCTTAATTCC+AGG | + | chr4_1:61878677-61878696 | None:intergenic | 30.0% | |
| AATAGAAAAATATAGGGCAG+GGG | + | chr4_1:61878965-61878984 | None:intergenic | 30.0% | |
| CAAATAGAAAAATATAGGGC+AGG | + | chr4_1:61878967-61878986 | None:intergenic | 30.0% | |
| TTGACATGTTCTCAAATGAT+CGG | - | chr4_1:61878984-61879003 | Msa0562240:intron | 30.0% | |
| AAAGACTAATAAAGTACGGT+GGG | + | chr4_1:61879089-61879108 | None:intergenic | 30.0% | |
| ACTGTACATGTAAAAATTGG+AGG | - | chr4_1:61879226-61879245 | Msa0562240:intron | 30.0% | |
| CTGTACATGTAAAAATTGGA+GGG | - | chr4_1:61879227-61879246 | Msa0562240:intron | 30.0% | |
| TGTACATGTAAAAATTGGAG+GGG | - | chr4_1:61879228-61879247 | Msa0562240:intron | 30.0% | |
| !! | TATATAAATTTTGGTGGGGA+AGG | - | chr4_1:61879713-61879732 | Msa0562240:intron | 30.0% |
| AGAATGCAACAAGCTTATTA+TGG | - | chr4_1:61879889-61879908 | Msa0562240:intron | 30.0% | |
| ATGATGTTTCAACAGATCAT+AGG | + | chr4_1:61880140-61880159 | None:intergenic | 30.0% | |
| TTAAATATGTGGTGACACTT+TGG | - | chr4_1:61880196-61880215 | Msa0562240:intron | 30.0% | |
| CTATAAGCTGGATATCATAA+AGG | + | chr4_1:61880286-61880305 | None:intergenic | 30.0% | |
| GGAAATTTCTTCTTCAGTTT+GGG | + | chr4_1:61880355-61880374 | None:intergenic | 30.0% | |
| AGGAAATTTCTTCTTCAGTT+TGG | + | chr4_1:61880356-61880375 | None:intergenic | 30.0% | |
| GATTCCTATATTAATGTCAG+TGG | - | chr4_1:61880685-61880704 | Msa0562240:intron | 30.0% | |
| CAATCCACTGACATTAATAT+AGG | + | chr4_1:61880692-61880711 | None:intergenic | 30.0% | |
| !! | TCTAGTTCTGGATATAGAAA+AGG | + | chr4_1:61881112-61881131 | None:intergenic | 30.0% |
| CATTTATGCTCTTCACTAAT+GGG | + | chr4_1:61881150-61881169 | None:intergenic | 30.0% | |
| ACATTTATGCTCTTCACTAA+TGG | + | chr4_1:61881151-61881170 | None:intergenic | 30.0% | |
| ! | GAAAAATTTAGGGTGAATGT+GGG | + | chr4_1:61881289-61881308 | None:intergenic | 30.0% |
| ! | TGAAAAATTTAGGGTGAATG+TGG | + | chr4_1:61881290-61881309 | None:intergenic | 30.0% |
| AAAACATGTCTCTTGATCTT+TGG | - | chr4_1:61881322-61881341 | Msa0562240:intron | 30.0% | |
| ! | ATGCTCTTATTTGATTCACT+AGG | - | chr4_1:61881549-61881568 | Msa0562240:intron | 30.0% |
| ! | TGCTCTTATTTGATTCACTA+GGG | - | chr4_1:61881550-61881569 | Msa0562240:intron | 30.0% |
| AACATACTCTCAAAAGACAA+CGG | - | chr4_1:61881649-61881668 | Msa0562240:intron | 30.0% | |
| ATATCTTGAATTCATCGTAC+TGG | + | chr4_1:61881711-61881730 | None:intergenic | 30.0% | |
| TCAAGATATCAAAGATGTTG+CGG | - | chr4_1:61881722-61881741 | Msa0562240:intron | 30.0% | |
| CTTCTCATTGTTAATGTTGA+GGG | + | chr4_1:61881902-61881921 | None:intergenic | 30.0% | |
| ACTTCTCATTGTTAATGTTG+AGG | + | chr4_1:61881903-61881922 | None:intergenic | 30.0% | |
| GCTGTCTAGATATATATTGT+CGG | - | chr4_1:61881997-61882016 | Msa0562240:five_prime_UTR | 30.0% | |
| CAAACGGAAAAGACATTGAT+CGG | + | chr4_1:61870947-61870966 | None:intergenic | 35.0% | |
| AAAACAAACTGATGCGATTC+TGG | + | chr4_1:61871037-61871056 | None:intergenic | 35.0% | |
| GAGAGACTCACAAATTACAA+AGG | + | chr4_1:61871064-61871083 | None:intergenic | 35.0% | |
| TGTTAATGATGTTGACACTG+AGG | - | chr4_1:61871278-61871297 | Msa0562240:CDS | 35.0% | |
| CACTATGCATTTGTAACCAT+TGG | + | chr4_1:61871460-61871479 | None:intergenic | 35.0% | |
| ! | TGATGATGATGTAAGGGAAA+TGG | - | chr4_1:61871499-61871518 | Msa0562240:CDS | 35.0% |
| GGAAATGGAATTCAACACAA+AGG | - | chr4_1:61871514-61871533 | Msa0562240:intron | 35.0% | |
| AGAAGAATGACAACCAATCT+AGG | - | chr4_1:61871681-61871700 | Msa0562240:CDS | 35.0% | |
| GGCACAACAATTATTTCGAA+TGG | + | chr4_1:61871711-61871730 | None:intergenic | 35.0% | |
| ATCAAATGAACAAAACGTGC+AGG | + | chr4_1:61871815-61871834 | None:intergenic | 35.0% | |
| GTCACAACATGTCATATCTT+CGG | - | chr4_1:61871899-61871918 | Msa0562240:intron | 35.0% | |
| !!! | GGTTTTTTGATGGGTCAAAA+GGG | - | chr4_1:61871920-61871939 | Msa0562240:intron | 35.0% |
| AAGGACTTGGGTTTATCAAA+AGG | - | chr4_1:61871951-61871970 | Msa0562240:intron | 35.0% | |
| AAAGGACCTGCAAAATTTCA+AGG | - | chr4_1:61871969-61871988 | Msa0562240:CDS | 35.0% | |
| ! | GATGATCCTTGAAATTTTGC+AGG | + | chr4_1:61871978-61871997 | None:intergenic | 35.0% |
| ATTTCAAGGATCATCAAGCA+AGG | - | chr4_1:61871983-61872002 | Msa0562240:CDS | 35.0% | |
| TTTCAAGGATCATCAAGCAA+GGG | - | chr4_1:61871984-61872003 | Msa0562240:CDS | 35.0% | |
| TATCAATGTAAGCTTTACCC+TGG | + | chr4_1:61872053-61872072 | None:intergenic | 35.0% | |
| ! | CGCCCAAACAAAATAGTTTT+TGG | - | chr4_1:61872111-61872130 | Msa0562240:CDS | 35.0% |
| ACACCACCTATAGAAATAAC+AGG | - | chr4_1:61872189-61872208 | Msa0562240:intron | 35.0% | |
| !!! | AAATCCCGTGTCATTTTTAG+TGG | - | chr4_1:61872218-61872237 | Msa0562240:intron | 35.0% |
| ! | TTTAGTGGATATAACCTCCA+TGG | - | chr4_1:61872233-61872252 | Msa0562240:intron | 35.0% |
| AAACAATAGAGACATACACG+TGG | - | chr4_1:61872294-61872313 | Msa0562240:intron | 35.0% | |
| GGTGGGTAAATGAAACTTAT+CGG | - | chr4_1:61872590-61872609 | Msa0562240:intron | 35.0% | |
| ! | AATGAAACTTATCGGTTGAC+GGG | - | chr4_1:61872598-61872617 | Msa0562240:intron | 35.0% |
| !!! | ATGCGAGAACATTTTTTGTG+TGG | - | chr4_1:61872640-61872659 | Msa0562240:intron | 35.0% |
| CTGACACAAAAACAACCTTA+TGG | - | chr4_1:61872717-61872736 | Msa0562240:intron | 35.0% | |
| TCTTGCCTATACCAAAATCT+GGG | - | chr4_1:61872850-61872869 | Msa0562240:intron | 35.0% | |
| TAATTCACTGTGATAAAGGG+TGG | + | chr4_1:61872881-61872900 | None:intergenic | 35.0% | |
| TTGCAAACCATTATTCGGTA+TGG | - | chr4_1:61872907-61872926 | Msa0562240:intron | 35.0% | |
| TTGTTGTCCATACCGAATAA+TGG | + | chr4_1:61872917-61872936 | None:intergenic | 35.0% | |
| AGAAAACGAGCACAAAATGA+CGG | - | chr4_1:61872938-61872957 | Msa0562240:intron | 35.0% | |
| TGTAAAAACAACGGAGACAA+AGG | - | chr4_1:61873405-61873424 | Msa0562240:intron | 35.0% | |
| GTAAAAACAACGGAGACAAA+GGG | - | chr4_1:61873406-61873425 | Msa0562240:intron | 35.0% | |
| AGAACGACATCAATCTGTAA+AGG | + | chr4_1:61873612-61873631 | None:intergenic | 35.0% | |
| TCTAACACCACACACAAAAA+TGG | - | chr4_1:61873629-61873648 | Msa0562240:intron | 35.0% | |
| CTTATCAGTTGAAGAGAATG+TGG | + | chr4_1:61873675-61873694 | None:intergenic | 35.0% | |
| CTGAAAAGGCTGAATATAAG+TGG | + | chr4_1:61873750-61873769 | None:intergenic | 35.0% | |
| ! | CACTTATATTCAGCCTTTTC+AGG | - | chr4_1:61873748-61873767 | Msa0562240:intron | 35.0% |
| GAGTTGTGTTTCCAAATACA+AGG | + | chr4_1:61873876-61873895 | None:intergenic | 35.0% | |
| CCAAAAGTGATGATTACTGA+TGG | + | chr4_1:61873925-61873944 | None:intergenic | 35.0% | |
| ! | CCATCAGTAATCATCACTTT+TGG | - | chr4_1:61873922-61873941 | Msa0562240:intron | 35.0% |
| ACCAATAGAGACATACAAGT+GGG | + | chr4_1:61873986-61874005 | None:intergenic | 35.0% | |
| AACCAATAGAGACATACAAG+TGG | + | chr4_1:61873987-61874006 | None:intergenic | 35.0% | |
| ! | TTTAGTGGATATAACCACCA+TGG | + | chr4_1:61874048-61874067 | None:intergenic | 35.0% |
| GCCTATAGAAATAACAGGTA+TGG | + | chr4_1:61874087-61874106 | None:intergenic | 35.0% | |
| ACACTGCCTATAGAAATAAC+AGG | + | chr4_1:61874092-61874111 | None:intergenic | 35.0% | |
| !!! | GGACGCCTAGAAATTTTTTT+TGG | + | chr4_1:61874169-61874188 | None:intergenic | 35.0% |
| TCACTCAATTTCCGGTAATT+AGG | - | chr4_1:61874439-61874458 | Msa0562240:intron | 35.0% | |
| ! | AGATGATGATGTAAGGGATA+TGG | + | chr4_1:61874777-61874796 | None:intergenic | 35.0% |
| ! | TGTGACAGATGATGATGTAA+GGG | + | chr4_1:61874783-61874802 | None:intergenic | 35.0% |
| ! | ATGTGACAGATGATGATGTA+AGG | + | chr4_1:61874784-61874803 | None:intergenic | 35.0% |
| ACTGATGCATTTGTAACCAT+CGG | - | chr4_1:61874805-61874824 | Msa0562240:intron | 35.0% | |
| ACATAGTGATACAGATAAGG+TGG | + | chr4_1:61874981-61875000 | None:intergenic | 35.0% | |
| GTATCACTATGTACATCAAG+AGG | - | chr4_1:61874989-61875008 | Msa0562240:intron | 35.0% | |
| !! | ACATTTGGGTTGAAAGATCA+TGG | + | chr4_1:61875288-61875307 | None:intergenic | 35.0% |
| TCTGTTGTTCAACTTCATGT+TGG | + | chr4_1:61875768-61875787 | None:intergenic | 35.0% | |
| CTCATGTTGGAAAAATCAAG+TGG | + | chr4_1:61875893-61875912 | None:intergenic | 35.0% | |
| ! | CACTTGATTTTTCCAACATG+AGG | - | chr4_1:61875891-61875910 | Msa0562240:intron | 35.0% |
| ! | TTAAGTAGGGCCATTTCTTT+TGG | + | chr4_1:61875984-61876003 | None:intergenic | 35.0% |
| TATCCAAGCTTACCATATTC+TGG | - | chr4_1:61876168-61876187 | Msa0562240:intron | 35.0% | |
| ! | TACCATATTCTGGTTGACTT+AGG | - | chr4_1:61876178-61876197 | Msa0562240:intron | 35.0% |
| ! | TATGGTTGATACTGCAAGAA+TGG | + | chr4_1:61876279-61876298 | None:intergenic | 35.0% |
| TATCTTTCACACAATAGCCA+TGG | - | chr4_1:61876609-61876628 | Msa0562240:intron | 35.0% | |
| ATTCGTACACGTAAAAACCA+TGG | + | chr4_1:61876629-61876648 | None:intergenic | 35.0% | |
| !! | CATTCCTCTAATTGACTTGT+GGG | - | chr4_1:61876651-61876670 | Msa0562240:intron | 35.0% |
| ! | TAACCGGTGTTAAATTAAGG+AGG | - | chr4_1:61876699-61876718 | Msa0562240:intron | 35.0% |
| !! | AAATTTGAGAGTGCCTTGAA+CGG | + | chr4_1:61877217-61877236 | None:intergenic | 35.0% |
| ACAATTTACGTACGCTAACA+TGG | + | chr4_1:61877316-61877335 | None:intergenic | 35.0% | |
| GTACACCAAAGAAAACACAA+TGG | - | chr4_1:61877455-61877474 | Msa0562240:intron | 35.0% | |
| TGTGTATTCTGATGTTACTG+TGG | + | chr4_1:61877484-61877503 | None:intergenic | 35.0% | |
| !!! | TTGTTTTGACTATTGTAGCG+GGG | + | chr4_1:61877546-61877565 | None:intergenic | 35.0% |
| ! | GATCCAGGAATTTTGTAAAG+TGG | - | chr4_1:61877761-61877780 | Msa0562240:intron | 35.0% |
| ! | TCCAGGAATTTTGTAAAGTG+GGG | - | chr4_1:61877763-61877782 | Msa0562240:intron | 35.0% |
| !!! | ACACCCACTAGTTTTTATGT+GGG | - | chr4_1:61877849-61877868 | Msa0562240:intron | 35.0% |
| ACTCCCACATAAAAACTAGT+GGG | + | chr4_1:61877855-61877874 | None:intergenic | 35.0% | |
| AAGTGGTTAAATACACCCTA+AGG | - | chr4_1:61877898-61877917 | Msa0562240:intron | 35.0% | |
| GTTATAGCAACATACACCTT+AGG | + | chr4_1:61877917-61877936 | None:intergenic | 35.0% | |
| CACCTTCTAACAAAAACAAG+TGG | - | chr4_1:61877938-61877957 | Msa0562240:intron | 35.0% | |
| !!! | ACCCACTTGTTTTTGTTAGA+AGG | + | chr4_1:61877943-61877962 | None:intergenic | 35.0% |
| TGTGTTCTAGCAAATCCTAT+AGG | - | chr4_1:61877962-61877981 | Msa0562240:intron | 35.0% | |
| !!! | ACACCCACTAGTTTTTATGT+GGG | - | chr4_1:61877849-61877868 | Msa0562240:intron | 35.0% |
| ACTCCCACATAAAAACTAGT+GGG | + | chr4_1:61877855-61877874 | None:intergenic | 35.0% | |
| ! | TTTTAGCAAAGCTACACCTT+AGG | + | chr4_1:61878066-61878085 | None:intergenic | 35.0% |
| CACTCCCACATAAAAAATAG+TGG | - | chr4_1:61878086-61878105 | Msa0562240:intron | 35.0% | |
| !!! | CACACCCACTATTTTTTATG+TGG | + | chr4_1:61878094-61878113 | None:intergenic | 35.0% |
| TGTTAAAAGACACCACCAAA+GGG | + | chr4_1:61878212-61878231 | None:intergenic | 35.0% | |
| TTGTTAAAAGACACCACCAA+AGG | + | chr4_1:61878213-61878232 | None:intergenic | 35.0% | |
| CAAGGTATGAGTATATGTGT+AGG | - | chr4_1:61878480-61878499 | Msa0562240:intron | 35.0% | |
| ! | ACCACACAACAATTTTCTCT+TGG | + | chr4_1:61878506-61878525 | None:intergenic | 35.0% |
| ! | AAATTGTTGTGTGGTTTGTG+TGG | - | chr4_1:61878511-61878530 | Msa0562240:intron | 35.0% |
| ! | AATTGTTGTGTGGTTTGTGT+GGG | - | chr4_1:61878512-61878531 | Msa0562240:intron | 35.0% |
| CATTTCTAAACAGTTAGTGC+AGG | - | chr4_1:61878617-61878636 | Msa0562240:intron | 35.0% | |
| TTTATCCTTAATTCCAGGGA+CGG | + | chr4_1:61878672-61878691 | None:intergenic | 35.0% | |
| CAAAGACTAATAAAGTACGG+TGG | + | chr4_1:61879090-61879109 | None:intergenic | 35.0% | |
| !! | CACCGTACTTTATTAGTCTT+TGG | - | chr4_1:61879088-61879107 | Msa0562240:intron | 35.0% |
| GGCCAAAGACTAATAAAGTA+CGG | + | chr4_1:61879093-61879112 | None:intergenic | 35.0% | |
| GTGGTATTTATACACGTTCT+TGG | + | chr4_1:61879383-61879402 | None:intergenic | 35.0% | |
| GAACGTGTATAAATACCACA+AGG | - | chr4_1:61879384-61879403 | Msa0562240:intron | 35.0% | |
| GTGTATAAATACCACAAGGT+TGG | - | chr4_1:61879388-61879407 | Msa0562240:intron | 35.0% | |
| TGATGAAGAATGAAAAGGGT+TGG | + | chr4_1:61879416-61879435 | None:intergenic | 35.0% | |
| ! | AAGGAATGAACGAAGAGTTT+TGG | - | chr4_1:61879732-61879751 | Msa0562240:intron | 35.0% |
| TGCTAATCCAAAGCTCAATT+TGG | - | chr4_1:61879838-61879857 | Msa0562240:intron | 35.0% | |
| AAAGAAGCCAAATTGAGCTT+TGG | + | chr4_1:61879848-61879867 | None:intergenic | 35.0% | |
| ! | TTCTTTTGTGACCACATCAA+TGG | - | chr4_1:61879862-61879881 | Msa0562240:intron | 35.0% |
| CAACAAGAACTATGTCGATA+TGG | - | chr4_1:61879919-61879938 | Msa0562240:intron | 35.0% | |
| ATGAAGTACATGAAGATCAG+TGG | + | chr4_1:61879960-61879979 | None:intergenic | 35.0% | |
| CGTTTATTCAATGCTGAGAT+TGG | - | chr4_1:61880463-61880482 | Msa0562240:intron | 35.0% | |
| GACTTGCATTCAAAAAGAAG+TGG | - | chr4_1:61880548-61880567 | Msa0562240:intron | 35.0% | |
| ACCTTATGATAAGCCTAACA+TGG | - | chr4_1:61880597-61880616 | Msa0562240:intron | 35.0% | |
| ACCATGTTAGGCTTATCATA+AGG | + | chr4_1:61880601-61880620 | None:intergenic | 35.0% | |
| ! | TATGTTGGGAGAAATTTGCT+AGG | - | chr4_1:61880762-61880781 | Msa0562240:intron | 35.0% |
| AGTGGAATTAAGAGAAGTGA+AGG | - | chr4_1:61880793-61880812 | Msa0562240:intron | 35.0% | |
| AGATGAGAACACAATTTGTG+TGG | - | chr4_1:61880865-61880884 | Msa0562240:intron | 35.0% | |
| TTCTATATCCAGAACTAGAG+TGG | - | chr4_1:61881113-61881132 | Msa0562240:intron | 35.0% | |
| TCTATATCCAGAACTAGAGT+GGG | - | chr4_1:61881114-61881133 | Msa0562240:intron | 35.0% | |
| ! | GTGAAGAGCATAAATGTTAG+TGG | - | chr4_1:61881154-61881173 | Msa0562240:intron | 35.0% |
| CATAAACAAGACCATACTTG+TGG | + | chr4_1:61881180-61881199 | None:intergenic | 35.0% | |
| !! | AAGTATGGTCTTGTTTATGC+TGG | - | chr4_1:61881181-61881200 | Msa0562240:intron | 35.0% |
| ATATGAAAGACAAGGTCTTC+AGG | + | chr4_1:61881244-61881263 | None:intergenic | 35.0% | |
| ! | ATGGAAGGAAGGTCAATTTT+AGG | + | chr4_1:61881393-61881412 | None:intergenic | 35.0% |
| TATTATCAGCTAATTCGCCT+AGG | - | chr4_1:61881442-61881461 | Msa0562240:intron | 35.0% | |
| ATTTGATTCACTAGGGTTAC+CGG | - | chr4_1:61881557-61881576 | Msa0562240:intron | 35.0% | |
| TTGAGAGAAAATGCTACCAT+AGG | + | chr4_1:61881679-61881698 | None:intergenic | 35.0% | |
| ! | TATGGTAGCATTTTCTCTCA+AGG | - | chr4_1:61881678-61881697 | Msa0562240:intron | 35.0% |
| !!! | CATTTTTTATGTCAAGCGCA+AGG | + | chr4_1:61881855-61881874 | None:intergenic | 35.0% |
| TCATTGTTAATGTTGAGGGA+AGG | + | chr4_1:61881898-61881917 | None:intergenic | 35.0% | |
| CATTAACAATGAGAAGTCCT+TGG | - | chr4_1:61881906-61881925 | Msa0562240:five_prime_UTR | 35.0% | |
| CAGAGATGCAATTGGAATGA+AGG | + | chr4_1:61870905-61870924 | None:intergenic | 40.0% | |
| CCTGAAATCAGAGATGCAAT+TGG | + | chr4_1:61870913-61870932 | None:intergenic | 40.0% | |
| CCAATTGCATCTCTGATTTC+AGG | - | chr4_1:61870910-61870929 | Msa0562240:three_prime_UTR | 40.0% | |
| TCACGATACCTGGAATCAAA+CGG | + | chr4_1:61870999-61871018 | None:intergenic | 40.0% | |
| ACTATGATTCTCACGATACC+TGG | + | chr4_1:61871009-61871028 | None:intergenic | 40.0% | |
| TAATGATGTTGACACTGAGG+TGG | - | chr4_1:61871281-61871300 | Msa0562240:CDS | 40.0% | |
| AGATGTGTGGAATTCAACCA+TGG | - | chr4_1:61871399-61871418 | Msa0562240:intron | 40.0% | |
| GTGGAATTCAACCATGGTAA+TGG | - | chr4_1:61871405-61871424 | Msa0562240:intron | 40.0% | |
| AATGGTGTTTGCAGTGAACA+AGG | - | chr4_1:61871423-61871442 | Msa0562240:intron | 40.0% | |
| ATGGTGTTTGCAGTGAACAA+GGG | - | chr4_1:61871424-61871443 | Msa0562240:intron | 40.0% | |
| TTCGAATGGTTGTCCTAGAT+TGG | + | chr4_1:61874580-61874599 | None:intergenic | 40.0% | |
| GCTAATTCATGGTTGTGAGA+GGG | + | chr4_1:61874487-61874506 | None:intergenic | 40.0% | |
| AGCTAATTCATGGTTGTGAG+AGG | + | chr4_1:61874486-61874505 | None:intergenic | 40.0% | |
| GCTGATAAACAAGTTGCTAG+TGG | - | chr4_1:61871860-61871879 | Msa0562240:CDS | 40.0% | |
| !!! | CGGTTTTTTGATGGGTCAAA+AGG | - | chr4_1:61871919-61871938 | Msa0562240:intron | 40.0% |
| !! | TTTTTGATGGGTCAAAAGGG+TGG | - | chr4_1:61871923-61871942 | Msa0562240:intron | 40.0% |
| TGATAAACCCAAGTCCTTCA+TGG | + | chr4_1:61871949-61871968 | None:intergenic | 40.0% | |
| !! | AGTTTTTGGGCAGATTCTAC+TGG | - | chr4_1:61872125-61872144 | Msa0562240:CDS | 40.0% |
| CAAAAGCGGTGATTACTGAT+GGG | - | chr4_1:61872356-61872375 | Msa0562240:CDS | 40.0% | |
| AAAAGCGGTGATTACTGATG+GGG | - | chr4_1:61872357-61872376 | Msa0562240:CDS | 40.0% | |
| TTTGAATGGAAGAGGGTTGT+TGG | - | chr4_1:61872544-61872563 | Msa0562240:intron | 40.0% | |
| AGAACGACATCAATCTGTGA+AGG | - | chr4_1:61872667-61872686 | Msa0562240:intron | 40.0% | |
| GTCTTGCCTATACCAAAATC+TGG | - | chr4_1:61872849-61872868 | Msa0562240:intron | 40.0% | |
| CTTGCCTATACCAAAATCTG+GGG | - | chr4_1:61872851-61872870 | Msa0562240:intron | 40.0% | |
| CGATGGAGATGTAACAGAAT+CGG | + | chr4_1:61872978-61872997 | None:intergenic | 40.0% | |
| !! | AACACCCCAGATTTTGGTAT+AGG | - | chr4_1:61873432-61873451 | Msa0562240:intron | 40.0% |
| CTAGCCTATACCAAAATCTG+GGG | + | chr4_1:61873439-61873458 | None:intergenic | 40.0% | |
| CCTAGCCTATACCAAAATCT+GGG | + | chr4_1:61873440-61873459 | None:intergenic | 40.0% | |
| TTGACACAAAAACAACCCTG+AGG | + | chr4_1:61873562-61873581 | None:intergenic | 40.0% | |
| !! | TACGAGACCATTTTTGTGTG+TGG | + | chr4_1:61873639-61873658 | None:intergenic | 40.0% |
| GGCTGAATATAAGTGGAAGA+GGG | + | chr4_1:61873743-61873762 | None:intergenic | 40.0% | |
| AGGCTGAATATAAGTGGAAG+AGG | + | chr4_1:61873744-61873763 | None:intergenic | 40.0% | |
| CAAAGGTGATGCCTTGTATT+TGG | - | chr4_1:61873862-61873881 | Msa0562240:intron | 40.0% | |
| ACCCACTTGTATGTCTCTAT+TGG | - | chr4_1:61873982-61874001 | Msa0562240:intron | 40.0% | |
| !! | AAATGGTTGTTTCTCCATGG+TGG | - | chr4_1:61874031-61874050 | Msa0562240:intron | 40.0% |
| TTTGGGCAGATTCTACTAGT+AGG | + | chr4_1:61874151-61874170 | None:intergenic | 40.0% | |
| TTTCACGGATCATCAAGCAA+GGG | + | chr4_1:61874293-61874312 | None:intergenic | 40.0% | |
| ATTTCACGGATCATCAAGCA+AGG | + | chr4_1:61874294-61874313 | None:intergenic | 40.0% | |
| GTCAGAGCATGTCATATCTT+GGG | + | chr4_1:61874379-61874398 | None:intergenic | 40.0% | |
| TGTCAGAGCATGTCATATCT+TGG | + | chr4_1:61874380-61874399 | None:intergenic | 40.0% | |
| AATGCGCTAGAGCTAATTCA+TGG | - | chr4_1:61874476-61874495 | Msa0562240:intron | 40.0% | |
| TTCGAATGGTTGTCCTAGAT+CGG | - | chr4_1:61874580-61874599 | Msa0562240:intron | 40.0% | |
| TAATGTTTGCGAGATACCAC+GGG | + | chr4_1:61874718-61874737 | None:intergenic | 40.0% | |
| GTAATGTTTGCGAGATACCA+CGG | + | chr4_1:61874719-61874738 | None:intergenic | 40.0% | |
| GGATATGGAATTCAACACAG+AGG | + | chr4_1:61874762-61874781 | None:intergenic | 40.0% | |
| GTGGAATTCAACCATGGTAA+TGG | + | chr4_1:61871405-61871424 | None:intergenic | 40.0% | |
| CGTACTAATAGAGATGCAGA+CGG | + | chr4_1:61874884-61874903 | None:intergenic | 40.0% | |
| AACCATGACGAACTACCATT+TGG | - | chr4_1:61875330-61875349 | Msa0562240:intron | 40.0% | |
| ATCCAAATGGTAGTTCGTCA+TGG | + | chr4_1:61875335-61875354 | None:intergenic | 40.0% | |
| CACAACATGGTTGATCCAAA+TGG | + | chr4_1:61875348-61875367 | None:intergenic | 40.0% | |
| AGTTGAACAACAGAAGAGTG+TGG | - | chr4_1:61875774-61875793 | Msa0562240:intron | 40.0% | |
| ! | AACAACAGAAGAGTGTGGTT+AGG | - | chr4_1:61875779-61875798 | Msa0562240:intron | 40.0% |
| CAACCAGAATATGGTAAGCT+TGG | + | chr4_1:61876174-61876193 | None:intergenic | 40.0% | |
| TGCCTAAGTCAACCAGAATA+TGG | + | chr4_1:61876183-61876202 | None:intergenic | 40.0% | |
| ! | TAATACCAGTCCGTGTTGTT+AGG | + | chr4_1:61876431-61876450 | None:intergenic | 40.0% |
| CTTGTTCTTTGGTTACTAGG+TGG | + | chr4_1:61876548-61876567 | None:intergenic | 40.0% | |
| CCACAAGTCAATTAGAGGAA+TGG | + | chr4_1:61876653-61876672 | None:intergenic | 40.0% | |
| !! | CCATTCCTCTAATTGACTTG+TGG | - | chr4_1:61876650-61876669 | Msa0562240:intron | 40.0% |
| TTTGCCCACAAGTCAATTAG+AGG | + | chr4_1:61876658-61876677 | None:intergenic | 40.0% | |
| GGTCCTCCTTAATTTAACAC+CGG | + | chr4_1:61876705-61876724 | None:intergenic | 40.0% | |
| TTAAGGAGGACCATTTAGCT+TGG | - | chr4_1:61876713-61876732 | Msa0562240:intron | 40.0% | |
| AGACCTCAATCATAGCGAAT+AGG | - | chr4_1:61877056-61877075 | Msa0562240:intron | 40.0% | |
| GACCTCAATCATAGCGAATA+GGG | - | chr4_1:61877057-61877076 | Msa0562240:intron | 40.0% | |
| TAAAGTGAGAATGTGGCAGT+GGG | - | chr4_1:61877108-61877127 | Msa0562240:intron | 40.0% | |
| GTATTCTGATGTTACTGTGG+TGG | + | chr4_1:61877481-61877500 | None:intergenic | 40.0% | |
| TGGTTTGAGCTAAGTAGTGA+CGG | - | chr4_1:61877739-61877758 | Msa0562240:intron | 40.0% | |
| ! | CCAGGAATTTTGTAAAGTGG+GGG | - | chr4_1:61877764-61877783 | Msa0562240:intron | 40.0% |
| !!! | CACACCCACTAGTTTTTATG+TGG | - | chr4_1:61877848-61877867 | Msa0562240:intron | 40.0% |
| CACTCCCACATAAAAACTAG+TGG | + | chr4_1:61877856-61877875 | None:intergenic | 40.0% | |
| !!! | CACACCCACTAGTTTTTATG+TGG | - | chr4_1:61877848-61877867 | Msa0562240:intron | 40.0% |
| CACTCCCACATAAAAACTAG+TGG | + | chr4_1:61877856-61877875 | None:intergenic | 40.0% | |
| ! | TTTTGTTACAAGCCACCCTT+TGG | - | chr4_1:61878194-61878213 | Msa0562240:intron | 40.0% |
| GCCAAGAGAAAATTGTTGTG+TGG | - | chr4_1:61878502-61878521 | Msa0562240:intron | 40.0% | |
| ! | ATGTATGTGCATTGGTACGT+AGG | + | chr4_1:61878649-61878668 | None:intergenic | 40.0% |
| AAAATATAGGGCAGGGGAAA+GGG | + | chr4_1:61878959-61878978 | None:intergenic | 40.0% | |
| AAAAATATAGGGCAGGGGAA+AGG | + | chr4_1:61878960-61878979 | None:intergenic | 40.0% | |
| GTGGGATTGATCTCATTTGA+TGG | + | chr4_1:61879071-61879090 | None:intergenic | 40.0% | |
| ATAAGGTCAGATTCAGAAGC+TGG | + | chr4_1:61879562-61879581 | None:intergenic | 40.0% | |
| CTTTACCTCTCGTTATGCTA+AGG | - | chr4_1:61879594-61879613 | Msa0562240:intron | 40.0% | |
| TTCTGGTATGCAACTTCCTT+TGG | + | chr4_1:61879794-61879813 | None:intergenic | 40.0% | |
| ! | TTTTGTGACCACATCAATGG+AGG | - | chr4_1:61879865-61879884 | Msa0562240:intron | 40.0% |
| ! | ATTTGCTAGGTACTTCGAAG+TGG | - | chr4_1:61880775-61880794 | Msa0562240:intron | 40.0% |
| ATTTGTGTGGCTGCAATCTT+AGG | - | chr4_1:61880878-61880897 | Msa0562240:intron | 40.0% | |
| CTTGCAGCATCAACATGAAT+AGG | + | chr4_1:61881073-61881092 | None:intergenic | 40.0% | |
| ATTCATGTTGATGCTGCAAG+TGG | - | chr4_1:61881073-61881092 | Msa0562240:intron | 40.0% | |
| AATGTTAGTGGCCACAAGTA+TGG | - | chr4_1:61881166-61881185 | Msa0562240:intron | 40.0% | |
| !! | GGTCTTGTTTATGCTGGAAT+TGG | - | chr4_1:61881187-61881206 | Msa0562240:intron | 40.0% |
| TTGTTTATGCTGGAATTGGC+TGG | - | chr4_1:61881191-61881210 | Msa0562240:intron | 40.0% | |
| TGTTTATGCTGGAATTGGCT+GGG | - | chr4_1:61881192-61881211 | Msa0562240:intron | 40.0% | |
| ! | AATTTAGGGTGAATGTGGGT+TGG | + | chr4_1:61881285-61881304 | None:intergenic | 40.0% |
| ATCTGACTAGAACCTGCAAA+TGG | + | chr4_1:61881412-61881431 | None:intergenic | 40.0% | |
| ! | AGAAAATGCAATGGTGCTGA+AGG | - | chr4_1:61881600-61881619 | Msa0562240:intron | 40.0% |
| AAGGAACACTTGGAAGAAAC+TGG | - | chr4_1:61881619-61881638 | Msa0562240:intron | 40.0% | |
| AAAAGACAACGGTGTTCCTA+TGG | - | chr4_1:61881660-61881679 | Msa0562240:intron | 40.0% | |
| ! | CATGATTTTCTGACGCTTGT+TGG | + | chr4_1:61881977-61881996 | None:intergenic | 40.0% |
| CAACAAGCGTCAGAAAATCA+TGG | - | chr4_1:61881975-61881994 | Msa0562240:five_prime_UTR | 40.0% | |
| !! | GTCGGTTATCTAGTTCTCTT+TGG | - | chr4_1:61882015-61882034 | Msa0562240:five_prime_UTR | 40.0% |
| ATCAAACGGATGTCAGTGAC+AGG | + | chr4_1:61870985-61871004 | None:intergenic | 45.0% | |
| ACTGACATCCGTTTGATTCC+AGG | - | chr4_1:61870988-61871007 | Msa0562240:CDS | 45.0% | |
| TCTCTCTCTCTCTCTCTCTA+AGG | - | chr4_1:61871120-61871139 | Msa0562240:CDS | 45.0% | |
| CTGATCGAGATGTAGATGTG+TGG | - | chr4_1:61871386-61871405 | Msa0562240:intron | 45.0% | |
| CACTGCAAACACCATTACCA+TGG | + | chr4_1:61874846-61874865 | None:intergenic | 45.0% | |
| CAAGGGAAAGAGAACTCCAA+TGG | - | chr4_1:61871441-61871460 | Msa0562240:intron | 45.0% | |
| GTCGTAGACTACTCGAAGTT+TGG | + | chr4_1:61871732-61871751 | None:intergenic | 45.0% | |
| AACGTGCAGGAGCTAATTCA+TGG | + | chr4_1:61871802-61871821 | None:intergenic | 45.0% | |
| GCTAGTGGTCTACATTCACA+AGG | - | chr4_1:61871875-61871894 | Msa0562240:intron | 45.0% | |
| TGCTACTCTGAGTTACTTCC+AGG | - | chr4_1:61872032-61872051 | Msa0562240:CDS | 45.0% | |
| GCTACTCTGAGTTACTTCCA+GGG | - | chr4_1:61872033-61872052 | Msa0562240:CDS | 45.0% | |
| TTTGGGCAGATTCTACTGGT+AGG | - | chr4_1:61872129-61872148 | Msa0562240:CDS | 45.0% | |
| ! | CCATCAGTAATCACCGCTTT+TGG | + | chr4_1:61872358-61872377 | None:intergenic | 45.0% |
| CCAAAAGCGGTGATTACTGA+TGG | - | chr4_1:61872355-61872374 | Msa0562240:CDS | 45.0% | |
| CAAAGGCGATGCCTTGTATA+TGG | + | chr4_1:61872418-61872437 | None:intergenic | 45.0% | |
| ! | TTATCGGTTGACGGGAATGT+GGG | - | chr4_1:61872606-61872625 | Msa0562240:intron | 45.0% |
| GACATCAATCTGTGAAGGAG+TGG | - | chr4_1:61872672-61872691 | Msa0562240:intron | 45.0% | |
| GGCAAGACAGTTGTCAACAT+AGG | + | chr4_1:61872837-61872856 | None:intergenic | 45.0% | |
| !! | AACGCCCCAGATTTTGGTAT+AGG | + | chr4_1:61872858-61872877 | None:intergenic | 45.0% |
| AAAACAACGGAGACAAAGGG+TGG | - | chr4_1:61873409-61873428 | Msa0562240:intron | 45.0% | |
| !! | CCCAGATTTTGGTATAGGCT+AGG | - | chr4_1:61873437-61873456 | Msa0562240:intron | 45.0% |
| GCCTAGCCTATACCAAAATC+TGG | + | chr4_1:61873441-61873460 | None:intergenic | 45.0% | |
| AATGCAAATGTCAGGCGCAA+AGG | - | chr4_1:61873845-61873864 | Msa0562240:intron | 45.0% | |
| AGGGCTTGGGTTTATCAGAA+AGG | + | chr4_1:61874326-61874345 | None:intergenic | 45.0% | |
| TGATAAACCCAAGCCCTTCA+TGG | - | chr4_1:61874329-61874348 | Msa0562240:intron | 45.0% | |
| CGCACAACAGTTAGTTCGAA+TGG | - | chr4_1:61874566-61874585 | Msa0562240:intron | 45.0% | |
| ATAAGAATGGCAGCCGATCT+AGG | + | chr4_1:61874596-61874615 | None:intergenic | 45.0% | |
| ATGGTGTTTGCAGTGAGCAA+GGG | + | chr4_1:61874841-61874860 | None:intergenic | 45.0% | |
| AATGGTGTTTGCAGTGAGCA+AGG | + | chr4_1:61874842-61874861 | None:intergenic | 45.0% | |
| CACTGCAAACACCATTACCA+TGG | - | chr4_1:61874846-61874865 | Msa0562240:intron | 45.0% | |
| TAATAGAGATGCAGACGGTG+TGG | + | chr4_1:61874879-61874898 | None:intergenic | 45.0% | |
| TACTACCTAACAACACGGAC+TGG | - | chr4_1:61876423-61876442 | Msa0562240:intron | 45.0% | |
| CTCCCTATTCGCTATGATTG+AGG | + | chr4_1:61877062-61877081 | None:intergenic | 45.0% | |
| CTAAAGTGAGAATGTGGCAG+TGG | - | chr4_1:61877107-61877126 | Msa0562240:intron | 45.0% | |
| AAAGTGAGAATGTGGCAGTG+GGG | - | chr4_1:61877109-61877128 | Msa0562240:intron | 45.0% | |
| ATTCACCTCTTGACCGTTCA+AGG | - | chr4_1:61877201-61877220 | Msa0562240:intron | 45.0% | |
| ! | GGTGGCCATTGTGTTTTCTT+TGG | + | chr4_1:61877463-61877482 | None:intergenic | 45.0% |
| CCCCCACTTTACAAAATTCC+TGG | + | chr4_1:61877767-61877786 | None:intergenic | 45.0% | |
| GTGTTCTAGCAGATGCCTAT+AGG | + | chr4_1:61877980-61877999 | None:intergenic | 45.0% | |
| TAAAAGACACCACCAAAGGG+TGG | + | chr4_1:61878209-61878228 | None:intergenic | 45.0% | |
| TACATCCGTCCCTGGAATTA+AGG | - | chr4_1:61878664-61878683 | Msa0562240:intron | 45.0% | |
| AAATATAGGGCAGGGGAAAG+GGG | + | chr4_1:61878958-61878977 | None:intergenic | 45.0% | |
| ! | TCAGATTCAGAAGCTGGCTT+TGG | + | chr4_1:61879556-61879575 | None:intergenic | 45.0% |
| AGAGTCCTTAGCATAACGAG+AGG | + | chr4_1:61879602-61879621 | None:intergenic | 45.0% | |
| ATGCTAAGGACTCTCTTCCT+AGG | - | chr4_1:61879608-61879627 | Msa0562240:intron | 45.0% | |
| ! | TCCTTTGGCATTGAGTTCTC+TGG | + | chr4_1:61879779-61879798 | None:intergenic | 45.0% |
| GCAACTCATCGTGTATGTTC+TGG | + | chr4_1:61879811-61879830 | None:intergenic | 45.0% | |
| CATACACGATGAGTTGCAGT+TGG | - | chr4_1:61879814-61879833 | Msa0562240:intron | 45.0% | |
| GCATTCTTCCTCCATTGATG+TGG | + | chr4_1:61879876-61879895 | None:intergenic | 45.0% | |
| ACATGAAGATCAGTGGTTGC+TGG | + | chr4_1:61879953-61879972 | None:intergenic | 45.0% | |
| ! | GGAGAAAATGAGAGTGCAGT+TGG | - | chr4_1:61880484-61880503 | Msa0562240:intron | 45.0% |
| AGGAACAGTTGGATCATCAG+AGG | - | chr4_1:61880510-61880529 | Msa0562240:intron | 45.0% | |
| ATCATCAGAGGCCATAATGC+TGG | - | chr4_1:61880522-61880541 | Msa0562240:intron | 45.0% | |
| GATAAGCCTAACATGGTCAC+TGG | - | chr4_1:61880604-61880623 | Msa0562240:intron | 45.0% | |
| GAGAATGAATACCTGCACGT+TGG | + | chr4_1:61880632-61880651 | None:intergenic | 45.0% | |
| ATCTACCATCTCAACAGCCT+TGG | + | chr4_1:61880849-61880868 | None:intergenic | 45.0% | |
| ! | CTGAAATCCCACTCTAGTTC+TGG | + | chr4_1:61881124-61881143 | None:intergenic | 45.0% |
| CTGGAATTGGCTGGGTAATA+TGG | - | chr4_1:61881200-61881219 | Msa0562240:intron | 45.0% | |
| GAATTGGCTGGGTAATATGG+AGG | - | chr4_1:61881203-61881222 | Msa0562240:intron | 45.0% | |
| GTCTTCAGGCAAGTCTTCTT+TGG | + | chr4_1:61881230-61881249 | None:intergenic | 45.0% | |
| TTGACCTTCCTTCCATTTGC+AGG | - | chr4_1:61881397-61881416 | Msa0562240:intron | 45.0% | |
| AGAACCTGCAAATGGAAGGA+AGG | + | chr4_1:61881404-61881423 | None:intergenic | 45.0% | |
| GACTAGAACCTGCAAATGGA+AGG | + | chr4_1:61881408-61881427 | None:intergenic | 45.0% | |
| CTAGGGTTACCGGAGTATAA+TGG | - | chr4_1:61881567-61881586 | Msa0562240:intron | 45.0% | |
| TGCAGTCCTCCATTATACTC+CGG | + | chr4_1:61881579-61881598 | None:intergenic | 45.0% | |
| GGACTGCAGAGAAAATGCAA+TGG | - | chr4_1:61881591-61881610 | Msa0562240:intron | 45.0% | |
| ! | AATGGTGCTGAAGGAACACT+TGG | - | chr4_1:61881609-61881628 | Msa0562240:intron | 45.0% |
| ATCCAATGCAGTGTCAACCA+AGG | + | chr4_1:61881926-61881945 | None:intergenic | 45.0% | |
| !!! | TTTATTTTTTTACAATATTT+CGG | - | chr4_1:61876787-61876806 | Msa0562240:intron | 5.0% |
| !! | AAATAAATAAATAAATAAAG+GGG | - | chr4_1:61877815-61877834 | Msa0562240:intron | 5.0% |
| !! | TATTTATTTATTTATTTATG+GGG | + | chr4_1:61878127-61878146 | None:intergenic | 5.0% |
| GATGCAAATTCCAGGCGCAA+AGG | + | chr4_1:61872435-61872454 | None:intergenic | 50.0% | |
| ! | CTTATCGGTTGACGGGAATG+TGG | - | chr4_1:61872605-61872624 | Msa0562240:intron | 50.0% |
| GGCTAGGCAGTTGTCAACAT+AGG | - | chr4_1:61873453-61873472 | Msa0562240:intron | 50.0% | |
| GTGAAAAGGGTGGCCATGAA+GGG | + | chr4_1:61874345-61874364 | None:intergenic | 50.0% | |
| CTCTGACACCTTGTGAATGC+AGG | - | chr4_1:61874392-61874411 | Msa0562240:intron | 50.0% | |
| GTTAGTGGCCTGCATTCACA+AGG | + | chr4_1:61874403-61874422 | None:intergenic | 50.0% | |
| CAAGGGAAAGAGAACTCCGA+TGG | + | chr4_1:61874824-61874843 | None:intergenic | 50.0% | |
| GACGGTGTGGAATTCAACCA+TGG | + | chr4_1:61874866-61874885 | None:intergenic | 50.0% | |
| AAGTGAGAATGTGGCAGTGG+GGG | - | chr4_1:61877110-61877129 | Msa0562240:intron | 50.0% | |
| !! | GTAGCGGGGTAGCTTTGATA+TGG | + | chr4_1:61877532-61877551 | None:intergenic | 50.0% |
| !! | AGCTAAGTAGTGACGGATCC+AGG | - | chr4_1:61877746-61877765 | Msa0562240:intron | 50.0% |
| TGTTACAAGCCACCCTTTGG+TGG | - | chr4_1:61878197-61878216 | Msa0562240:intron | 50.0% | |
| AGGGACGGATGTATGTGCAT+TGG | + | chr4_1:61878657-61878676 | None:intergenic | 50.0% | |
| AATGCACATACATCCGTCCC+TGG | - | chr4_1:61878656-61878675 | Msa0562240:intron | 50.0% | |
| AATATAGGGCAGGGGAAAGG+GGG | + | chr4_1:61878957-61878976 | None:intergenic | 50.0% | |
| AAGGGTTGGAACCAACCTTG+TGG | + | chr4_1:61879402-61879421 | None:intergenic | 50.0% | |
| GCCAGAGAACTCAATGCCAA+AGG | - | chr4_1:61879775-61879794 | Msa0562240:intron | 50.0% | |
| ! | AATGAGAGTGCAGTTGGTGC+AGG | - | chr4_1:61880490-61880509 | Msa0562240:intron | 50.0% |
| TGCAAGTCCTGCCAGCATTA+TGG | + | chr4_1:61880536-61880555 | None:intergenic | 50.0% | |
| GAAGTGGCAGAACAAACGCA+AGG | - | chr4_1:61880564-61880583 | Msa0562240:intron | 50.0% | |
| CAGAACAAACGCAAGGCTGA+GGG | - | chr4_1:61880571-61880590 | Msa0562240:intron | 50.0% | |
| CATGTTGATGCTGCAAGTGG+TGG | - | chr4_1:61881076-61881095 | Msa0562240:intron | 50.0% | |
| GCTAATTCGCCTAGGTCAAG+AGG | - | chr4_1:61881450-61881469 | Msa0562240:intron | 50.0% | |
| TAGGTCAAGAGGTGAGCCTA+GGG | - | chr4_1:61881461-61881480 | Msa0562240:intron | 50.0% | |
| GGGTTACCGGAGTATAATGG+AGG | - | chr4_1:61881570-61881589 | Msa0562240:intron | 50.0% | |
| ACTTTGATGTGGTGAGCACC+AGG | + | chr4_1:61881784-61881803 | None:intergenic | 50.0% | |
| ! | CCACATCAAAGTGCTTCGTG+CGG | - | chr4_1:61881792-61881811 | Msa0562240:intron | 50.0% |
| GTCCTTGGTTGACACTGCAT+TGG | - | chr4_1:61881921-61881940 | Msa0562240:five_prime_UTR | 50.0% | |
| GGTCAAAAGGGTGGCCATGA+AGG | - | chr4_1:61871932-61871951 | Msa0562240:intron | 55.0% | |
| AAGGGTGGCCATGAAGGACT+TGG | - | chr4_1:61871938-61871957 | Msa0562240:intron | 55.0% | |
| AGGGTGGCCATGAAGGACTT+GGG | - | chr4_1:61871939-61871958 | Msa0562240:intron | 55.0% | |
| ! | GGGTGGAACACCCCAGATTT+TGG | - | chr4_1:61873426-61873445 | Msa0562240:intron | 55.0% |
| GGTGAAAAGGGTGGCCATGA+AGG | + | chr4_1:61874346-61874365 | None:intergenic | 55.0% | |
| CCACGGGTTTGCCGTAAGAA+AGG | + | chr4_1:61874702-61874721 | None:intergenic | 55.0% | |
| CCTTTCTTACGGCAAACCCG+TGG | - | chr4_1:61874699-61874718 | Msa0562240:intron | 55.0% | |
| GAGTGCCTTGAACGGTCAAG+AGG | + | chr4_1:61877209-61877228 | None:intergenic | 55.0% | |
| ! | GCAGTTGGTGCAGGAACAGT+TGG | - | chr4_1:61880499-61880518 | Msa0562240:intron | 55.0% |
| TCAGAGGCCATAATGCTGGC+AGG | - | chr4_1:61880526-61880545 | Msa0562240:intron | 55.0% | |
| GCAGAACAAACGCAAGGCTG+AGG | - | chr4_1:61880570-61880589 | Msa0562240:intron | 55.0% | |
| TTGGCGCCAGTGACCATGTT+AGG | + | chr4_1:61880613-61880632 | None:intergenic | 55.0% | |
| CCATCTCAACAGCCTTGGCA+GGG | + | chr4_1:61880844-61880863 | None:intergenic | 55.0% | |
| ACCATCTCAACAGCCTTGGC+AGG | + | chr4_1:61880845-61880864 | None:intergenic | 55.0% | |
| !! | ATGTGGGTTGGTCTGCTCCA+AGG | + | chr4_1:61881273-61881292 | None:intergenic | 55.0% |
| CTAGGCTCACCTCTTGACCT+AGG | + | chr4_1:61881462-61881481 | None:intergenic | 55.0% | |
| CTAGGTCAAGAGGTGAGCCT+AGG | - | chr4_1:61881460-61881479 | Msa0562240:intron | 55.0% | |
| TCAAAGATGTTGCGGCGCCA+TGG | - | chr4_1:61881730-61881749 | Msa0562240:intron | 55.0% | |
| ATGCCGGTACAACCCAACCA+TGG | + | chr4_1:61881750-61881769 | None:intergenic | 55.0% | |
| ! | CCAGGTGGCATTGGATATGC+CGG | + | chr4_1:61881766-61881785 | None:intergenic | 55.0% |
| TTGATGTGGTGAGCACCAGG+TGG | + | chr4_1:61881781-61881800 | None:intergenic | 55.0% | |
| ! | CCGCACGAAGCACTTTGATG+TGG | + | chr4_1:61881795-61881814 | None:intergenic | 55.0% |
| ! | GGGTGGAACGCCCCAGATTT+TGG | + | chr4_1:61872864-61872883 | None:intergenic | 60.0% |
| AGGGTGGCCATGAAGGGCTT+GGG | + | chr4_1:61874339-61874358 | None:intergenic | 60.0% | |
| AAGGGTGGCCATGAAGGGCT+TGG | + | chr4_1:61874340-61874359 | None:intergenic | 60.0% | |
| CCCTGCCAAGGCTGTTGAGA+TGG | - | chr4_1:61880841-61880860 | Msa0562240:intron | 60.0% | |
| AGATGTTGCGGCGCCATGGT+TGG | - | chr4_1:61881734-61881753 | Msa0562240:intron | 60.0% | |
| GATGTTGCGGCGCCATGGTT+GGG | - | chr4_1:61881735-61881754 | Msa0562240:intron | 60.0% | |
| ! | GCGCCATGGTTGGGTTGTAC+CGG | - | chr4_1:61881744-61881763 | Msa0562240:intron | 60.0% |
| CCGGCATATCCAATGCCACC+TGG | - | chr4_1:61881763-61881782 | Msa0562240:intron | 60.0% | |
| TGGTGAGCACCAGGTGGCAT+TGG | + | chr4_1:61881775-61881794 | None:intergenic | 60.0% | |
| !! | CAAGGCATCGCCTTTGCGCC+TGG | - | chr4_1:61872422-61872441 | Msa0562240:CDS | 65.0% |
| GGTCACTGGCGCCAACGTGC+AGG | - | chr4_1:61880618-61880637 | Msa0562240:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 61870832 | 61882112 | 61870832 | ID=Msa0562240;Name=Msa0562240 |
| chr4_1 | mRNA | 61870832 | 61882112 | 61870832 | ID=Msa0562240-mRNA-1;Parent=Msa0562240;Name=Msa0562240-mRNA-1;_AED=0.20;_eAED=0.20;_QI=248|0.85|0.62|1|0.71|0.62|8|107|441 |
| chr4_1 | exon | 61870832 | 61871373 | 61870832 | ID=Msa0562240-mRNA-1:exon:19555;Parent=Msa0562240-mRNA-1 |
| chr4_1 | exon | 61871473 | 61871525 | 61871473 | ID=Msa0562240-mRNA-1:exon:19554;Parent=Msa0562240-mRNA-1 |
| chr4_1 | exon | 61871631 | 61871819 | 61871631 | ID=Msa0562240-mRNA-1:exon:19553;Parent=Msa0562240-mRNA-1 |
| chr4_1 | exon | 61871850 | 61871884 | 61871850 | ID=Msa0562240-mRNA-1:exon:19552;Parent=Msa0562240-mRNA-1 |
| chr4_1 | exon | 61871969 | 61872183 | 61871969 | ID=Msa0562240-mRNA-1:exon:19551;Parent=Msa0562240-mRNA-1 |
| chr4_1 | exon | 61872305 | 61872505 | 61872305 | ID=Msa0562240-mRNA-1:exon:19550;Parent=Msa0562240-mRNA-1 |
| chr4_1 | exon | 61872974 | 61873178 | 61872974 | ID=Msa0562240-mRNA-1:exon:19549;Parent=Msa0562240-mRNA-1 |
| chr4_1 | exon | 61881872 | 61882112 | 61881872 | ID=Msa0562240-mRNA-1:exon:19548;Parent=Msa0562240-mRNA-1 |
| chr4_1 | five_prime_UTR | 61881872 | 61882112 | 61881872 | ID=Msa0562240-mRNA-1:five_prime_utr;Parent=Msa0562240-mRNA-1 |
| chr4_1 | five_prime_UTR | 61873172 | 61873178 | 61873172 | ID=Msa0562240-mRNA-1:five_prime_utr;Parent=Msa0562240-mRNA-1 |
| chr4_1 | CDS | 61872974 | 61873171 | 61872974 | ID=Msa0562240-mRNA-1:cds;Parent=Msa0562240-mRNA-1 |
| chr4_1 | CDS | 61872305 | 61872505 | 61872305 | ID=Msa0562240-mRNA-1:cds;Parent=Msa0562240-mRNA-1 |
| chr4_1 | CDS | 61871969 | 61872183 | 61871969 | ID=Msa0562240-mRNA-1:cds;Parent=Msa0562240-mRNA-1 |
| chr4_1 | CDS | 61871850 | 61871884 | 61871850 | ID=Msa0562240-mRNA-1:cds;Parent=Msa0562240-mRNA-1 |
| chr4_1 | CDS | 61871631 | 61871819 | 61871631 | ID=Msa0562240-mRNA-1:cds;Parent=Msa0562240-mRNA-1 |
| chr4_1 | CDS | 61871473 | 61871525 | 61871473 | ID=Msa0562240-mRNA-1:cds;Parent=Msa0562240-mRNA-1 |
| chr4_1 | CDS | 61870939 | 61871373 | 61870939 | ID=Msa0562240-mRNA-1:cds;Parent=Msa0562240-mRNA-1 |
| chr4_1 | three_prime_UTR | 61870832 | 61870938 | 61870832 | ID=Msa0562240-mRNA-1:three_prime_utr;Parent=Msa0562240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
