AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1212210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1212210 MtrunA17_Chr4g0060951 99.286 280 2 0 3 282 2 281 0.0 565
Msa1212210 MtrunA17_Chr7g0225861 39.171 217 124 3 61 274 7 218 8.62e-46 153
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1212210 AT5G61410.1 85.714 280 40 0 3 282 2 281 2.92e-179 495
Msa1212210 AT5G61410.2 85.714 280 40 0 3 282 2 281 2.92e-179 495
Msa1212210 AT3G01850.1 37.778 225 131 4 61 281 6 225 1.01e-46 156
Msa1212210 AT3G01850.2 37.778 225 131 4 61 281 6 225 1.01e-46 156
Msa1212210 AT1G63290.1 39.631 217 123 3 61 274 8 219 1.16e-43 148
Msa1212210 AT3G01850.3 37.629 194 112 4 92 281 10 198 1.98e-35 126
Msa1212210 AT3G01850.4 37.629 194 112 4 92 281 10 198 1.98e-35 126

Find 124 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATCTTTGTTCTTTGAATT+TGG 0.067005 8_1:-72082779 None:intergenic
TTCCGCCAACTTTGCAAAAT+TGG 0.109693 8_1:+72083697 Msa1212210:CDS
AGAGGTCCAATAGTAATATT+TGG 0.187699 8_1:-72083921 None:intergenic
GCAGCTTACATTGTTTAAAA+TGG 0.189259 8_1:-72086161 None:intergenic
TAAGATAATTTAAAGAAAAT+TGG 0.211694 8_1:-72086992 None:intergenic
CATTCCTTTGTAGCTATAAA+AGG 0.220868 8_1:+72086077 Msa1212210:intron
TATCATAACATCTTTAATTC+AGG 0.299292 8_1:+72086631 Msa1212210:three_prime_UTR
AAAAGATGCATCAAAGATAA+AGG 0.322053 8_1:+72082503 Msa1212210:five_prime_UTR
GATAGCAAGCCATGCCTAAT+TGG 0.327172 8_1:-72086520 None:intergenic
GTTGCTGGTTCTGCTGTGTT+TGG 0.328175 8_1:+72085944 Msa1212210:CDS
CTCTCTAGGGTGTGAATCCT+TGG 0.328972 8_1:+72085486 Msa1212210:intron
TTGGATTCATGTTGATGTTA+TGG 0.329699 8_1:+72083884 Msa1212210:CDS
GAAAATTTCAACTGTGGTTA+AGG 0.331095 8_1:+72083616 Msa1212210:CDS
GGAGCTAATGCACTGGTTGC+TGG 0.334561 8_1:+72085929 Msa1212210:CDS
TCACAAACTTGTTTACAGTA+TGG 0.347766 8_1:-72086702 None:intergenic
TTTGTCCCAAATATTACTAT+TGG 0.352259 8_1:+72083915 Msa1212210:CDS
CTTTGCAAAATTGGGAGAAC+AGG 0.352968 8_1:+72083706 Msa1212210:CDS
GTCTATCAGATTGTAACTTT+CGG 0.353678 8_1:+72086669 Msa1212210:three_prime_UTR
TTAGCGGAGTACCAGGGTTT+AGG 0.354271 8_1:-72084536 None:intergenic
TCCGCCAACTTTGCAAAATT+GGG 0.359542 8_1:+72083698 Msa1212210:CDS
GAGGCCTTTCACACAGAAAC+TGG 0.375837 8_1:-72086125 None:intergenic
CTTATCTGCAATGGTTGGTT+TGG 0.383423 8_1:-72082600 None:intergenic
AAATCTGGCACCCGCTGATC+TGG 0.396879 8_1:-72084089 None:intergenic
AGCACCTTGTAAGCATTTGC+TGG 0.401136 8_1:-72085533 None:intergenic
CATATTTGTGTATAATCTCT+TGG 0.401167 8_1:+72086606 Msa1212210:three_prime_UTR
GCTCCTGCTTTGATGAAATC+TGG 0.406074 8_1:-72084104 None:intergenic
CCCTGTGACAGATTTACCTT+TGG 0.408758 8_1:+72083962 Msa1212210:CDS
TAGAGTTGGCTGGTTGTGAT+TGG 0.411673 8_1:+72083865 Msa1212210:CDS
ATCTTGCATGTAGTCCTCTT+CGG 0.416428 8_1:-72086961 None:intergenic
GAGAAGATTGTGCGTGGAGA+AGG 0.423151 8_1:+72085372 Msa1212210:CDS
CCTTGAGAAAGTGAGAGAAC+GGG 0.429377 8_1:-72082889 None:intergenic
TCATGGTCAGCAGGCCAATT+AGG 0.433935 8_1:+72086506 Msa1212210:three_prime_UTR
AACCTGACAGATAATGTTCA+TGG 0.442153 8_1:+72086489 Msa1212210:intron
ATATTGTTCTCATTATCGTT+AGG 0.443707 8_1:+72086913 Msa1212210:three_prime_UTR
TCTGTAAACCCTGGCTTTGG+TGG 0.447445 8_1:+72085307 Msa1212210:CDS
GAGGTCCAATAGTAATATTT+GGG 0.451344 8_1:-72083920 None:intergenic
GATTAATTGCACGATGCAAA+TGG 0.460222 8_1:-72084166 None:intergenic
CCAAATTCAAAGAACAAAGA+TGG 0.460818 8_1:+72082779 Msa1212210:exon
ATTTGGCAGGTGATTGAGGC+TGG 0.461400 8_1:+72085908 Msa1212210:intron
GGTGCTGGCAGTGGTTGACT+TGG 0.467221 8_1:+72085273 Msa1212210:intron
TTGGATTTGCTTATCTGCAA+TGG 0.467991 8_1:-72082609 None:intergenic
AAACTCTGGCCACCAAAGCC+AGG 0.471474 8_1:-72085316 None:intergenic
GCAATAGAATATGTTCTTGA+TGG 0.472384 8_1:+72084561 Msa1212210:CDS
ATTGCACTTAGCGGAGTACC+AGG 0.474775 8_1:-72084543 None:intergenic
ATGTCTGTAAACCCTGGCTT+TGG 0.475764 8_1:+72085304 Msa1212210:CDS
CACCACCAGCAATTTCTCTC+TGG 0.476194 8_1:+72086542 Msa1212210:three_prime_UTR
AAAAGCCTGGGAGCTAAAGC+TGG 0.477458 8_1:+72084507 Msa1212210:CDS
GATAATGAGAACAATATAAG+AGG 0.478539 8_1:-72086907 None:intergenic
CTATTAACACCCATGGTGCT+AGG 0.482192 8_1:-72086872 None:intergenic
CAACTCCAGCTTTAGCTCCC+AGG 0.485580 8_1:-72084512 None:intergenic
GTGAAAGGCCTCCGTGGTAT+CGG 0.486245 8_1:+72086136 Msa1212210:exon
ATCACAACAAAGGCATTACT+TGG 0.489578 8_1:-72086582 None:intergenic
AAGTTGGCGGAAAGAATAGA+TGG 0.490752 8_1:-72083686 None:intergenic
TGCACGATGCAAATGGATAG+TGG 0.498424 8_1:-72084159 None:intergenic
AAAGTCCATTGATCTGAGAT+TGG 0.502632 8_1:-72082839 None:intergenic
GTGCCAGATTTCATCAAAGC+AGG 0.505243 8_1:+72084101 Msa1212210:CDS
ACCCTCCAATCTCAGATCAA+TGG 0.506335 8_1:+72082834 Msa1212210:CDS
GCACCTTGTAAGCATTTGCT+GGG 0.508474 8_1:-72085532 None:intergenic
TATTACTATTGGACCTCTTG+TGG 0.513189 8_1:+72083926 Msa1212210:CDS
AGTTTCATCCCTAGCACCAT+GGG 0.513708 8_1:+72086863 Msa1212210:three_prime_UTR
ACATATTCTATTGCACTTAG+CGG 0.514934 8_1:-72084552 None:intergenic
TTTACCTTTGGATGTCCACC+TGG 0.515412 8_1:+72083974 Msa1212210:CDS
TCCAAAGGTAAATCTGTCAC+AGG 0.515740 8_1:-72083963 None:intergenic
AGATAATGTTCATGGTCAGC+AGG 0.516204 8_1:+72086497 Msa1212210:intron
TGTTATTTGGCAGGTGATTG+AGG 0.527723 8_1:+72085904 Msa1212210:intron
CTTGGCTCTCGATAAAACTC+TGG 0.531835 8_1:-72085330 None:intergenic
ACCTTGAGAAAGTGAGAGAA+CGG 0.535225 8_1:-72082890 None:intergenic
CCCGTTCTCTCACTTTCTCA+AGG 0.536451 8_1:+72082889 Msa1212210:CDS
TAATTCCAGAGAGAAATTGC+TGG 0.537960 8_1:-72086547 None:intergenic
GTGTTGGTGGGGACTTGACT+TGG 0.539087 8_1:-72082628 None:intergenic
CCTTGGATTGAAGTGGATGG+TGG 0.541023 8_1:+72085503 Msa1212210:CDS
CTTGGATTGAAGTGGATGGT+GGG 0.541584 8_1:+72085504 Msa1212210:CDS
ATTTGCTTATCTGCAATGGT+TGG 0.542711 8_1:-72082605 None:intergenic
TACCCCAGCAAATGCTTACA+AGG 0.545343 8_1:+72085529 Msa1212210:CDS
TCACAAAAGTGTGTCGATTG+AGG 0.547629 8_1:-72082744 None:intergenic
AGAAAGTGAGAGAACGGGGA+TGG 0.550196 8_1:-72082884 None:intergenic
CTAGGTAAAAGCAGTAGAGT+TGG 0.552705 8_1:+72083851 Msa1212210:intron
GATTGTAGAACCAGATCAGC+GGG 0.553131 8_1:+72084079 Msa1212210:CDS
TGAGCCAGTTTCTGTGTGAA+AGG 0.553781 8_1:+72086121 Msa1212210:exon
GTAAAAGCAGTAGAGTTGGC+TGG 0.557874 8_1:+72083855 Msa1212210:CDS
TCCATTGATCTGAGATTGGA+GGG 0.561639 8_1:-72082835 None:intergenic
GGAGCTAAAGATTATGCTGA+AGG 0.567422 8_1:+72085965 Msa1212210:CDS
TTAATTATGTCTGTAAACCC+TGG 0.567653 8_1:+72085298 Msa1212210:CDS
ATTCATGTTGATGTTATGGA+TGG 0.568834 8_1:+72083888 Msa1212210:CDS
TATTAACACCCATGGTGCTA+GGG 0.568950 8_1:-72086871 None:intergenic
GGAAGAGAGAATTCTTGTGA+AGG 0.574241 8_1:-72082863 None:intergenic
CAGTTTCATCCCTAGCACCA+TGG 0.575551 8_1:+72086862 Msa1212210:three_prime_UTR
TGTGGATGACACGTGTTGGT+GGG 0.575744 8_1:-72082640 None:intergenic
AACTCTGGCCACCAAAGCCA+GGG 0.576163 8_1:-72085315 None:intergenic
GATCTGAGATTGGAGGGTAG+AGG 0.576309 8_1:-72082829 None:intergenic
CAAACTTGTTTACAGTATGG+TGG 0.581814 8_1:-72086699 None:intergenic
ACAAATATGCATCACAACAA+AGG 0.584229 8_1:-72086592 None:intergenic
CGCAATGCATCAACCACAAG+AGG 0.585518 8_1:-72083939 None:intergenic
TTTCACACAGAAACTGGCTC+AGG 0.586572 8_1:-72086119 None:intergenic
CCACCATCCACTTCAATCCA+AGG 0.590960 8_1:-72085503 None:intergenic
AATACCAGGTGGACATCCAA+AGG 0.598223 8_1:-72083978 None:intergenic
GAAGAGAGAATTCTTGTGAA+GGG 0.599383 8_1:-72082862 None:intergenic
ACGATGTTGTAAATCCAGAA+AGG 0.601707 8_1:-72082670 None:intergenic
GTGTGGATGACACGTGTTGG+TGG 0.608591 8_1:-72082641 None:intergenic
TGAGGCTGGAGCTAATGCAC+TGG 0.611831 8_1:+72085922 Msa1212210:CDS
ATCCAGAAAGGAAAATCGTG+TGG 0.612731 8_1:-72082658 None:intergenic
GTCCATTGATCTGAGATTGG+AGG 0.614275 8_1:-72082836 None:intergenic
GTCAGCAGGCCAATTAGGCA+TGG 0.614879 8_1:+72086511 Msa1212210:three_prime_UTR
TCTCGCACCCAACACGACCA+AGG 0.617389 8_1:-72082543 None:intergenic
TGTGAATCCTTGGATTGAAG+TGG 0.621250 8_1:+72085496 Msa1212210:CDS
CAGGAGGAAAATTTCAACTG+TGG 0.630527 8_1:+72083610 Msa1212210:intron
TTCTGTGTGAAAGGCCTCCG+TGG 0.630783 8_1:+72086130 Msa1212210:exon
GCTGGAGTTGTCCTAAACCC+TGG 0.635850 8_1:+72084525 Msa1212210:CDS
TGTCTATACATAAACCGAAG+AGG 0.645679 8_1:+72086947 Msa1212210:three_prime_UTR
TTGGATTGAAGTGGATGGTG+GGG 0.646043 8_1:+72085505 Msa1212210:CDS
CTTGAGAAAGTGAGAGAACG+GGG 0.647983 8_1:-72082888 None:intergenic
GTGGATGACACGTGTTGGTG+GGG 0.649852 8_1:-72082639 None:intergenic
GAAGAGGACTACATGCAAGA+TGG 0.650432 8_1:+72086963 Msa1212210:three_prime_UTR
ATCGTGTGGATGACACGTGT+TGG 0.651869 8_1:-72082644 None:intergenic
AATCCTTGGATTGAAGTGGA+TGG 0.661026 8_1:+72085500 Msa1212210:CDS
CCAAAGGTAAATCTGTCACA+GGG 0.662632 8_1:-72083962 None:intergenic
TGATTTGAGAAGATTGTGCG+TGG 0.667135 8_1:+72085366 Msa1212210:CDS
CACCTTGTAAGCATTTGCTG+GGG 0.672494 8_1:-72085531 None:intergenic
GAATGATCTATTAACACCCA+TGG 0.672715 8_1:-72086879 None:intergenic
TTGCACTTAGCGGAGTACCA+GGG 0.677738 8_1:-72084542 None:intergenic
TTCCAGAGAGAAATTGCTGG+TGG 0.683882 8_1:-72086544 None:intergenic
TTAAAATGGATCCGATACCA+CGG 0.685693 8_1:-72086147 None:intergenic
TGATTGTAGAACCAGATCAG+CGG 0.686244 8_1:+72084078 Msa1212210:CDS
AAATGGATCCGATACCACGG+AGG 0.776012 8_1:-72086144 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATATACTGAAAATAAA+CGG - chr8_1:72084623-72084642 None:intergenic 10.0%
!! AAAATCTTATAATCTTATTA+TGG + chr8_1:72085252-72085271 Msa1212210:intron 10.0%
!!! TTTTTATTTTATTTTACTCT+TGG + chr8_1:72086368-72086387 Msa1212210:intron 10.0%
!! TTTAAAAGTTAAATATGTCT+TGG + chr8_1:72084384-72084403 Msa1212210:intron 15.0%
!! ATTATATACTGAAAATAAAC+GGG - chr8_1:72084622-72084641 None:intergenic 15.0%
!!! AATATTAATGATGCTATTTA+TGG + chr8_1:72084645-72084664 Msa1212210:intron 15.0%
!! AACAATAAAAATTTAACACA+TGG - chr8_1:72084732-72084751 None:intergenic 15.0%
!! AATTATAAACAGAATAGAAA+AGG + chr8_1:72084831-72084850 Msa1212210:intron 15.0%
!!! AATTAGCTTAATTTCAAATT+TGG + chr8_1:72085107-72085126 Msa1212210:intron 15.0%
!! ACTATCTCATAAAAAAAAAA+TGG - chr8_1:72085408-72085427 None:intergenic 15.0%
!!! ATTTTTTTTTTATGAGATAG+TGG + chr8_1:72085407-72085426 Msa1212210:intron 15.0%
!! TTAATATTTAAGAGTTCTAT+TGG + chr8_1:72085727-72085746 Msa1212210:intron 15.0%
!!! ATTTTCAGTATTATGTTATT+TGG + chr8_1:72085891-72085910 Msa1212210:intron 15.0%
!! AACAATAATTGAAAAGAAAG+AGG - chr8_1:72082919-72082938 None:intergenic 20.0%
!! AAATATAAAATGATTCTACG+AGG - chr8_1:72083440-72083459 None:intergenic 20.0%
!! TAACAAAAAGATATTAAAGC+AGG - chr8_1:72083581-72083600 None:intergenic 20.0%
!! TGTATTTGACAATTATACAA+AGG - chr8_1:72084310-72084329 None:intergenic 20.0%
!! AAATGAATTCAAAAAGGAAA+AGG - chr8_1:72084591-72084610 None:intergenic 20.0%
!! CAGAAAAAATGAATTCAAAA+AGG - chr8_1:72084597-72084616 None:intergenic 20.0%
!! TTATATACTGAAAATAAACG+GGG - chr8_1:72084621-72084640 None:intergenic 20.0%
!!! TTACCAATATTTTTAGAACA+TGG - chr8_1:72084803-72084822 None:intergenic 20.0%
!!! AATCAGAAATTTTCTTTACT+TGG - chr8_1:72085351-72085370 None:intergenic 20.0%
!! TCATTCTAAATTATAAGTGA+TGG - chr8_1:72085581-72085600 None:intergenic 20.0%
!! CAATAGTAAACAAATAATGA+AGG + chr8_1:72085784-72085803 Msa1212210:intron 20.0%
!! AAAGATTAAATTATGTGAGT+AGG + chr8_1:72085998-72086017 Msa1212210:intron 20.0%
!! AATTAATTTAGAAACCTTGA+TGG - chr8_1:72086196-72086215 None:intergenic 20.0%
!! TATCATAACATCTTTAATTC+AGG + chr8_1:72086631-72086650 Msa1212210:three_prime_UTR 20.0%
!!! TGTGATTTTGACATTATATA+AGG + chr8_1:72086720-72086739 Msa1212210:three_prime_UTR 20.0%
!! AAAAACTGAAAAATTATAGC+TGG - chr8_1:72086757-72086776 None:intergenic 20.0%
! AAAAGATGCATCAAAGATAA+AGG + chr8_1:72082503-72082522 Msa1212210:five_prime_UTR 25.0%
! TATTGTTAGAATTCAACTTC+TGG + chr8_1:72082932-72082951 Msa1212210:intron 25.0%
! ATTGTTAGAATTCAACTTCT+GGG + chr8_1:72082933-72082952 Msa1212210:intron 25.0%
!! AGAATTAGCTAATTTGAAGT+TGG - chr8_1:72083169-72083188 None:intergenic 25.0%
! AGAAATATGCTAAAATGACT+TGG - chr8_1:72083787-72083806 None:intergenic 25.0%
! TTTGTCCCAAATATTACTAT+TGG + chr8_1:72083915-72083934 Msa1212210:CDS 25.0%
! TATGTATAAAGATGAATACC+AGG - chr8_1:72083995-72084014 None:intergenic 25.0%
! CTAAGTACTAACATTAGTAA+AGG + chr8_1:72084410-72084429 Msa1212210:intron 25.0%
! CTTAATCAGATAAATTCAAC+AGG - chr8_1:72084471-72084490 None:intergenic 25.0%
! CTGATTAAGTTTCTTGATTT+AGG + chr8_1:72084482-72084501 Msa1212210:intron 25.0%
!!! GTTCCATGTTCTAAAAATAT+TGG + chr8_1:72084797-72084816 Msa1212210:intron 25.0%
!!! ACCAAATTCATTTTAGTTTC+TGG + chr8_1:72084898-72084917 Msa1212210:intron 25.0%
! ACCAGAAACTAAAATGAATT+TGG - chr8_1:72084902-72084921 None:intergenic 25.0%
!!! GTTTGACTTTTCAAATTTTG+TGG - chr8_1:72085015-72085034 None:intergenic 25.0%
! AATTTGAAAAGTCAAACATC+TGG + chr8_1:72085018-72085037 Msa1212210:intron 25.0%
! TTATAATCTTATTATGGTGC+TGG + chr8_1:72085258-72085277 Msa1212210:intron 25.0%
! TTCCTTACATAATCTCTAAT+TGG + chr8_1:72085456-72085475 Msa1212210:intron 25.0%
! ATAATCCCAACATAAAACAT+TGG + chr8_1:72085667-72085686 Msa1212210:intron 25.0%
! TAATCCCAACATAAAACATT+GGG + chr8_1:72085668-72085687 Msa1212210:intron 25.0%
! AATTCAATGAACAAAGTTTG+TGG - chr8_1:72085814-72085833 None:intergenic 25.0%
!! TATTCCTTTTATAGCTACAA+AGG - chr8_1:72086084-72086103 None:intergenic 25.0%
!!! TGAAGTTTCAGTTTTTTGAT+TGG + chr8_1:72086218-72086237 Msa1212210:intron 25.0%
!!! GAAGTTTCAGTTTTTTGATT+GGG + chr8_1:72086219-72086238 Msa1212210:intron 25.0%
! TTCACATTCGTTTCTTATAT+TGG - chr8_1:72086276-72086295 None:intergenic 25.0%
! AATTAGAATCAAATTGTCCT+CGG - chr8_1:72086444-72086463 None:intergenic 25.0%
! CATATTTGTGTATAATCTCT+TGG + chr8_1:72086606-72086625 Msa1212210:three_prime_UTR 25.0%
! GAAACTGAATGATATTAACT+TGG - chr8_1:72086783-72086802 None:intergenic 25.0%
! GAAACTGAATGATATTAACT+TGG - chr8_1:72086783-72086802 None:intergenic 25.0%
! GATAATGAGAACAATATAAG+AGG - chr8_1:72086910-72086929 None:intergenic 25.0%
! ATATTGTTCTCATTATCGTT+AGG + chr8_1:72086913-72086932 Msa1212210:three_prime_UTR 25.0%
CCATCTTTGTTCTTTGAATT+TGG - chr8_1:72082782-72082801 None:intergenic 30.0%
CCAAATTCAAAGAACAAAGA+TGG + chr8_1:72082779-72082798 Msa1212210:exon 30.0%
TGTAATATGAGCATTACTCT+TGG - chr8_1:72083088-72083107 None:intergenic 30.0%
AAAGTTAAGCTCTTGAACAA+GGG + chr8_1:72083137-72083156 Msa1212210:intron 30.0%
AGATAACAAGTAGTAAAACC+AGG - chr8_1:72083253-72083272 None:intergenic 30.0%
CACAAAAAAACCAAGTTGTA+AGG - chr8_1:72083276-72083295 None:intergenic 30.0%
!!! TACAACTTGGTTTTTTTGTG+AGG + chr8_1:72083276-72083295 Msa1212210:intron 30.0%
TCTATGTGCAAATTCTATGA+AGG + chr8_1:72083316-72083335 Msa1212210:intron 30.0%
TCTATGTGCAAATTCTATGA+AGG + chr8_1:72083316-72083335 Msa1212210:intron 30.0%
TCACAATTCACAGTAAATCT+AGG - chr8_1:72083464-72083483 None:intergenic 30.0%
!!! CTTTTTGTTATTGTGAACTC+AGG + chr8_1:72083591-72083610 Msa1212210:intron 30.0%
GAAAATTTCAACTGTGGTTA+AGG + chr8_1:72083616-72083635 Msa1212210:CDS 30.0%
TTGGATTCATGTTGATGTTA+TGG + chr8_1:72083884-72083903 Msa1212210:CDS 30.0%
ATTCATGTTGATGTTATGGA+TGG + chr8_1:72083888-72083907 Msa1212210:CDS 30.0%
GAGGTCCAATAGTAATATTT+GGG - chr8_1:72083923-72083942 None:intergenic 30.0%
AGAGGTCCAATAGTAATATT+TGG - chr8_1:72083924-72083943 None:intergenic 30.0%
ATCGTGCAATTAATCAAGTA+AGG + chr8_1:72084174-72084193 Msa1212210:intron 30.0%
CAAAGGCTTGAATATATGTT+TGG - chr8_1:72084293-72084312 None:intergenic 30.0%
ATACACATCCATTTATGTGA+TGG - chr8_1:72084362-72084381 None:intergenic 30.0%
ATCACATAAATGGATGTGTA+TGG + chr8_1:72084361-72084380 Msa1212210:intron 30.0%
TTGATTTAGGTAAAAAGCCT+GGG + chr8_1:72084495-72084514 Msa1212210:intron 30.0%
ACATATTCTATTGCACTTAG+CGG - chr8_1:72084555-72084574 None:intergenic 30.0%
GCAATAGAATATGTTCTTGA+TGG + chr8_1:72084561-72084580 Msa1212210:CDS 30.0%
! AATGATGCTATTTATGGCTT+AGG + chr8_1:72084651-72084670 Msa1212210:intron 30.0%
AACTCTTAGTTTACCGATAT+TGG - chr8_1:72084700-72084719 None:intergenic 30.0%
GACATTCATAGAATATTCAG+TGG - chr8_1:72084993-72085012 None:intergenic 30.0%
TTAATTATGTCTGTAAACCC+TGG + chr8_1:72085298-72085317 Msa1212210:CDS 30.0%
ATTATGTAAGGAATAAGAGC+CGG - chr8_1:72085449-72085468 None:intergenic 30.0%
GACCAATTAGAGATTATGTA+AGG - chr8_1:72085461-72085480 None:intergenic 30.0%
! GTTTCCCAATGTTTTATGTT+GGG - chr8_1:72085675-72085694 None:intergenic 30.0%
! TGTTTCCCAATGTTTTATGT+TGG - chr8_1:72085676-72085695 None:intergenic 30.0%
! TCAGTATTATGTTATTTGGC+AGG + chr8_1:72085895-72085914 Msa1212210:intron 30.0%
GATTAAATTATGTGAGTAGG+AGG + chr8_1:72086001-72086020 Msa1212210:intron 30.0%
TGTGATTCTGATATTTGTCA+TGG + chr8_1:72086050-72086069 Msa1212210:intron 30.0%
! CTTTTATAGCTACAAAGGAA+TGG - chr8_1:72086079-72086098 None:intergenic 30.0%
CATTCCTTTGTAGCTATAAA+AGG + chr8_1:72086077-72086096 Msa1212210:intron 30.0%
GCAGCTTACATTGTTTAAAA+TGG - chr8_1:72086164-72086183 None:intergenic 30.0%
! TTAAACTTGCAACTCGATTT+TGG + chr8_1:72086319-72086338 Msa1212210:intron 30.0%
!!! TTTTCACATTTGTTTTGTCC+AGG - chr8_1:72086413-72086432 None:intergenic 30.0%
ATGTGAAAAATATTATCCCG+AGG + chr8_1:72086424-72086443 Msa1212210:intron 30.0%
ATTAGAATCAAATTGTCCTC+GGG - chr8_1:72086443-72086462 None:intergenic 30.0%
ACAAATATGCATCACAACAA+AGG - chr8_1:72086595-72086614 None:intergenic 30.0%
GTCTATCAGATTGTAACTTT+CGG + chr8_1:72086669-72086688 Msa1212210:three_prime_UTR 30.0%
! TCACAAACTTGTTTACAGTA+TGG - chr8_1:72086705-72086724 None:intergenic 30.0%
AGAAAACCCAAAAAAGTCCT+TGG + chr8_1:72082526-72082545 Msa1212210:five_prime_UTR 35.0%
ATTTGCTTATCTGCAATGGT+TGG - chr8_1:72082608-72082627 None:intergenic 35.0%
! TTGGATTTGCTTATCTGCAA+TGG - chr8_1:72082612-72082631 None:intergenic 35.0%
ACGATGTTGTAAATCCAGAA+AGG - chr8_1:72082673-72082692 None:intergenic 35.0%
! AAAGTCCATTGATCTGAGAT+TGG - chr8_1:72082842-72082861 None:intergenic 35.0%
GAAGAGAGAATTCTTGTGAA+GGG - chr8_1:72082865-72082884 None:intergenic 35.0%
!! ATGTTAACTTGTTCTGCGTA+AGG + chr8_1:72083023-72083042 Msa1212210:intron 35.0%
GCTTAACTTTGTAACCTCAA+GGG - chr8_1:72083127-72083146 None:intergenic 35.0%
AGCTTAACTTTGTAACCTCA+AGG - chr8_1:72083128-72083147 None:intergenic 35.0%
CAAAGTTAAGCTCTTGAACA+AGG + chr8_1:72083136-72083155 Msa1212210:intron 35.0%
! GCATTGTCAACTTTTTAACC+TGG + chr8_1:72083232-72083251 Msa1212210:intron 35.0%
! CTTGTTATCTCCTTACAACT+TGG + chr8_1:72083263-72083282 Msa1212210:intron 35.0%
!!! ACTTGGTTTTTTTGTGAGGT+TGG + chr8_1:72083280-72083299 Msa1212210:intron 35.0%
TAAAATGATTCTACGAGGAG+TGG - chr8_1:72083435-72083454 None:intergenic 35.0%
AAGCCTTCTCTAACAAATTC+GGG - chr8_1:72083534-72083553 None:intergenic 35.0%
CAAGCCTTCTCTAACAAATT+CGG - chr8_1:72083535-72083554 None:intergenic 35.0%
!! AATTTGTTAGAGAAGGCTTG+TGG + chr8_1:72083535-72083554 Msa1212210:intron 35.0%
!! TTTGTTATTGTGAACTCAGG+AGG + chr8_1:72083594-72083613 Msa1212210:intron 35.0%
! TTCTCCCAATTTTGCAAAGT+TGG - chr8_1:72083705-72083724 None:intergenic 35.0%
TTGTCACCAATCATAACTGT+TGG + chr8_1:72083809-72083828 Msa1212210:intron 35.0%
AGAACTCCAACAGTTATGAT+TGG - chr8_1:72083818-72083837 None:intergenic 35.0%
TTGGAGTTCTTGTGTTATCT+TGG + chr8_1:72083828-72083847 Msa1212210:intron 35.0%
TATTACTATTGGACCTCTTG+TGG + chr8_1:72083926-72083945 Msa1212210:CDS 35.0%
GTATAAAGATGAATACCAGG+TGG - chr8_1:72083992-72084011 None:intergenic 35.0%
GATTAATTGCACGATGCAAA+TGG - chr8_1:72084169-72084188 None:intergenic 35.0%
TGCAGTAACCATCACATAAA+TGG + chr8_1:72084351-72084370 Msa1212210:intron 35.0%
ATTCAACAGGAAACTGAAAC+TGG - chr8_1:72084458-72084477 None:intergenic 35.0%
CTTGATTTAGGTAAAAAGCC+TGG + chr8_1:72084494-72084513 Msa1212210:intron 35.0%
TGGTAACCACATAAGCATAT+GGG - chr8_1:72084680-72084699 None:intergenic 35.0%
! TTGGTAACCACATAAGCATA+TGG - chr8_1:72084681-72084700 None:intergenic 35.0%
GCTTATGTGGTTACCAATAT+CGG + chr8_1:72084684-72084703 Msa1212210:intron 35.0%
CAGAATAGAAAAGGTTCGTT+TGG + chr8_1:72084840-72084859 Msa1212210:intron 35.0%
!! AGTTTCTGGTGAATTACACT+TGG + chr8_1:72084912-72084931 Msa1212210:intron 35.0%
CTTGACTTTCATCATCATAG+GGG - chr8_1:72085135-72085154 None:intergenic 35.0%
CCTTGACTTTCATCATCATA+GGG - chr8_1:72085136-72085155 None:intergenic 35.0%
ACCTTGACTTTCATCATCAT+AGG - chr8_1:72085137-72085156 None:intergenic 35.0%
TTATGTAAGGAATAAGAGCC+GGG - chr8_1:72085448-72085467 None:intergenic 35.0%
!! TCAATGATTGCCTTTTCAAG+AGG + chr8_1:72085644-72085663 Msa1212210:intron 35.0%
TTGGGATTATCCTCTTGAAA+AGG - chr8_1:72085657-72085676 None:intergenic 35.0%
!! TGAGCAAAAAAAGAAGCACT+TGG - chr8_1:72085753-72085772 None:intergenic 35.0%
TACGTGACATAGAAAACCAT+AGG + chr8_1:72085845-72085864 Msa1212210:intron 35.0%
TACAACTCAAACAGATCCTA+TGG - chr8_1:72085864-72085883 None:intergenic 35.0%
!! ATAGGATCTGTTTGAGTTGT+AGG + chr8_1:72085863-72085882 Msa1212210:intron 35.0%
!! TAGGATCTGTTTGAGTTGTA+GGG + chr8_1:72085864-72085883 Msa1212210:intron 35.0%
TTAAAATGGATCCGATACCA+CGG - chr8_1:72086150-72086169 None:intergenic 35.0%
AACCTGACAGATAATGTTCA+TGG + chr8_1:72086489-72086508 Msa1212210:intron 35.0%
TAATTCCAGAGAGAAATTGC+TGG - chr8_1:72086550-72086569 None:intergenic 35.0%
!! ATCACAACAAAGGCATTACT+TGG - chr8_1:72086585-72086604 None:intergenic 35.0%
! CAAACTTGTTTACAGTATGG+TGG - chr8_1:72086702-72086721 None:intergenic 35.0%
GAATGATCTATTAACACCCA+TGG - chr8_1:72086816-72086835 None:intergenic 35.0%
GAATGATCTATTAACACCCA+TGG - chr8_1:72086816-72086835 None:intergenic 35.0%
TGTCTATACATAAACCGAAG+AGG + chr8_1:72086947-72086966 Msa1212210:three_prime_UTR 35.0%
!!! ACACGACCAAGGACTTTTTT+GGG - chr8_1:72082535-72082554 None:intergenic 40.0%
!!! AACACGACCAAGGACTTTTT+TGG - chr8_1:72082536-72082555 None:intergenic 40.0%
AAAAAAGTCCTTGGTCGTGT+TGG + chr8_1:72082535-72082554 Msa1212210:five_prime_UTR 40.0%
AAAAAGTCCTTGGTCGTGTT+GGG + chr8_1:72082536-72082555 Msa1212210:five_prime_UTR 40.0%
! CTTATCTGCAATGGTTGGTT+TGG - chr8_1:72082603-72082622 None:intergenic 40.0%
! ATCCACACGATTTTCCTTTC+TGG + chr8_1:72082656-72082675 Msa1212210:five_prime_UTR 40.0%
ATCCAGAAAGGAAAATCGTG+TGG - chr8_1:72082661-72082680 None:intergenic 40.0%
!! TCACAAAAGTGTGTCGATTG+AGG - chr8_1:72082747-72082766 None:intergenic 40.0%
! CAATCGACACACTTTTGTGA+AGG + chr8_1:72082747-72082766 Msa1212210:five_prime_UTR 40.0%
! TCCATTGATCTGAGATTGGA+GGG - chr8_1:72082838-72082857 None:intergenic 40.0%
GGAAGAGAGAATTCTTGTGA+AGG - chr8_1:72082866-72082885 None:intergenic 40.0%
ACCTTGAGAAAGTGAGAGAA+CGG - chr8_1:72082893-72082912 None:intergenic 40.0%
TTAAGCTCTTGAACAAGGGA+AGG + chr8_1:72083141-72083160 Msa1212210:intron 40.0%
!! ACACCCGAATTTGTTAGAGA+AGG + chr8_1:72083528-72083547 Msa1212210:intron 40.0%
CAGGAGGAAAATTTCAACTG+TGG + chr8_1:72083610-72083629 Msa1212210:intron 40.0%
AAGTTGGCGGAAAGAATAGA+TGG - chr8_1:72083689-72083708 None:intergenic 40.0%
TTCCGCCAACTTTGCAAAAT+TGG + chr8_1:72083697-72083716 Msa1212210:CDS 40.0%
TCCGCCAACTTTGCAAAATT+GGG + chr8_1:72083698-72083717 Msa1212210:CDS 40.0%
! TCCCAATTTTGCAAAGTTGG+CGG - chr8_1:72083702-72083721 None:intergenic 40.0%
CTTTGCAAAATTGGGAGAAC+AGG + chr8_1:72083706-72083725 Msa1212210:CDS 40.0%
GTTCTTGTGTTATCTTGGCT+AGG + chr8_1:72083833-72083852 Msa1212210:intron 40.0%
CTAGGTAAAAGCAGTAGAGT+TGG + chr8_1:72083851-72083870 Msa1212210:intron 40.0%
CCAAAGGTAAATCTGTCACA+GGG - chr8_1:72083965-72083984 None:intergenic 40.0%
TCCAAAGGTAAATCTGTCAC+AGG - chr8_1:72083966-72083985 None:intergenic 40.0%
TGATTGTAGAACCAGATCAG+CGG + chr8_1:72084078-72084097 Msa1212210:CDS 40.0%
CTGCATTCTTGACAAGATTC+TGG - chr8_1:72084336-72084355 None:intergenic 40.0%
AGGTTTCCCATATGCTTATG+TGG + chr8_1:72084671-72084690 Msa1212210:intron 40.0%
! CCCTATGATGATGAAAGTCA+AGG + chr8_1:72085133-72085152 Msa1212210:intron 40.0%
TGATTTGAGAAGATTGTGCG+TGG + chr8_1:72085366-72085385 Msa1212210:CDS 40.0%
TATGTAAGGAATAAGAGCCG+GGG - chr8_1:72085447-72085466 None:intergenic 40.0%
! TAATTGGTCTCTCTCTCTCT+AGG + chr8_1:72085472-72085491 Msa1212210:intron 40.0%
! AATTGGTCTCTCTCTCTCTA+GGG + chr8_1:72085473-72085492 Msa1212210:intron 40.0%
TGTGAATCCTTGGATTGAAG+TGG + chr8_1:72085496-72085515 Msa1212210:CDS 40.0%
AATCCTTGGATTGAAGTGGA+TGG + chr8_1:72085500-72085519 Msa1212210:CDS 40.0%
! TGTTATTTGGCAGGTGATTG+AGG + chr8_1:72085904-72085923 Msa1212210:intron 40.0%
GGAGCTAAAGATTATGCTGA+AGG + chr8_1:72085965-72085984 Msa1212210:CDS 40.0%
GACCATGAACATTATCTGTC+AGG - chr8_1:72086494-72086513 None:intergenic 40.0%
AGATAATGTTCATGGTCAGC+AGG + chr8_1:72086497-72086516 Msa1212210:intron 40.0%
! TATTAACACCCATGGTGCTA+GGG - chr8_1:72086808-72086827 None:intergenic 40.0%
! TATTAACACCCATGGTGCTA+GGG - chr8_1:72086808-72086827 None:intergenic 40.0%
ATCTTGCATGTAGTCCTCTT+CGG - chr8_1:72086964-72086983 None:intergenic 40.0%
ACCCTCCAATCTCAGATCAA+TGG + chr8_1:72082834-72082853 Msa1212210:CDS 45.0%
! GTCCATTGATCTGAGATTGG+AGG - chr8_1:72082839-72082858 None:intergenic 45.0%
CTTGAGAAAGTGAGAGAACG+GGG - chr8_1:72082891-72082910 None:intergenic 45.0%
CCTTGAGAAAGTGAGAGAAC+GGG - chr8_1:72082892-72082911 None:intergenic 45.0%
CTTTGTAACCTCAAGGGACA+CGG - chr8_1:72083121-72083140 None:intergenic 45.0%
GTAAAAGCAGTAGAGTTGGC+TGG + chr8_1:72083855-72083874 Msa1212210:CDS 45.0%
! TAGAGTTGGCTGGTTGTGAT+TGG + chr8_1:72083865-72083884 Msa1212210:CDS 45.0%
CCCTGTGACAGATTTACCTT+TGG + chr8_1:72083962-72083981 Msa1212210:CDS 45.0%
TTTACCTTTGGATGTCCACC+TGG + chr8_1:72083974-72083993 Msa1212210:CDS 45.0%
AATACCAGGTGGACATCCAA+AGG - chr8_1:72083981-72084000 None:intergenic 45.0%
GATTGTAGAACCAGATCAGC+GGG + chr8_1:72084079-72084098 Msa1212210:CDS 45.0%
GTGCCAGATTTCATCAAAGC+AGG + chr8_1:72084101-72084120 Msa1212210:CDS 45.0%
GCTCCTGCTTTGATGAAATC+TGG - chr8_1:72084107-72084126 None:intergenic 45.0%
TGCACGATGCAAATGGATAG+TGG - chr8_1:72084162-72084181 None:intergenic 45.0%
ACAGGAAACTGAAACTGGAG+TGG - chr8_1:72084453-72084472 None:intergenic 45.0%
!! TCTTATTATGGTGCTGGCAG+TGG + chr8_1:72085264-72085283 Msa1212210:intron 45.0%
ATGTCTGTAAACCCTGGCTT+TGG + chr8_1:72085304-72085323 Msa1212210:CDS 45.0%
! CTTGGCTCTCGATAAAACTC+TGG - chr8_1:72085333-72085352 None:intergenic 45.0%
! TGGATTTTGTGTTTTCCCCC+CGG + chr8_1:72085427-72085446 Msa1212210:intron 45.0%
ATGTAAGGAATAAGAGCCGG+GGG - chr8_1:72085446-72085465 None:intergenic 45.0%
CTTGGATTGAAGTGGATGGT+GGG + chr8_1:72085504-72085523 Msa1212210:CDS 45.0%
TTGGATTGAAGTGGATGGTG+GGG + chr8_1:72085505-72085524 Msa1212210:CDS 45.0%
TACCCCAGCAAATGCTTACA+AGG + chr8_1:72085529-72085548 Msa1212210:CDS 45.0%
! CACCTTGTAAGCATTTGCTG+GGG - chr8_1:72085534-72085553 None:intergenic 45.0%
GCACCTTGTAAGCATTTGCT+GGG - chr8_1:72085535-72085554 None:intergenic 45.0%
AGCACCTTGTAAGCATTTGC+TGG - chr8_1:72085536-72085555 None:intergenic 45.0%
! GGAGGCATACATTGCAATAG+TGG + chr8_1:72086019-72086038 Msa1212210:intron 45.0%
! TTTCACACAGAAACTGGCTC+AGG - chr8_1:72086122-72086141 None:intergenic 45.0%
TGAGCCAGTTTCTGTGTGAA+AGG + chr8_1:72086121-72086140 Msa1212210:exon 45.0%
TGCGTGAAAAAATGTGCTCC+TGG + chr8_1:72086392-72086411 Msa1212210:intron 45.0%
GATAGCAAGCCATGCCTAAT+TGG - chr8_1:72086523-72086542 None:intergenic 45.0%
TTCCAGAGAGAAATTGCTGG+TGG - chr8_1:72086547-72086566 None:intergenic 45.0%
AGTTTCATCCCTAGCACCAT+GGG + chr8_1:72086797-72086816 Msa1212210:intron 45.0%
CTATTAACACCCATGGTGCT+AGG - chr8_1:72086809-72086828 None:intergenic 45.0%
AGTTTCATCCCTAGCACCAT+GGG + chr8_1:72086797-72086816 Msa1212210:intron 45.0%
CTATTAACACCCATGGTGCT+AGG - chr8_1:72086809-72086828 None:intergenic 45.0%
GAAGAGGACTACATGCAAGA+TGG + chr8_1:72086963-72086982 Msa1212210:three_prime_UTR 45.0%
! TGTGGATGACACGTGTTGGT+GGG - chr8_1:72082643-72082662 None:intergenic 50.0%
ATCGTGTGGATGACACGTGT+TGG - chr8_1:72082647-72082666 None:intergenic 50.0%
! GATCTGAGATTGGAGGGTAG+AGG - chr8_1:72082832-72082851 None:intergenic 50.0%
AGAAAGTGAGAGAACGGGGA+TGG - chr8_1:72082887-72082906 None:intergenic 50.0%
CCCGTTCTCTCACTTTCTCA+AGG + chr8_1:72082889-72082908 Msa1212210:CDS 50.0%
GATTCAAACCGTGTCCCTTG+AGG + chr8_1:72083110-72083129 Msa1212210:intron 50.0%
CGCAATGCATCAACCACAAG+AGG - chr8_1:72083942-72083961 None:intergenic 50.0%
AAAAGCCTGGGAGCTAAAGC+TGG + chr8_1:72084507-72084526 Msa1212210:CDS 50.0%
! TTAGCGGAGTACCAGGGTTT+AGG - chr8_1:72084539-72084558 None:intergenic 50.0%
! TTGCACTTAGCGGAGTACCA+GGG - chr8_1:72084545-72084564 None:intergenic 50.0%
! ATTGCACTTAGCGGAGTACC+AGG - chr8_1:72084546-72084565 None:intergenic 50.0%
!! TCTGTAAACCCTGGCTTTGG+TGG + chr8_1:72085307-72085326 Msa1212210:CDS 50.0%
GAGAAGATTGTGCGTGGAGA+AGG + chr8_1:72085372-72085391 Msa1212210:CDS 50.0%
AGATTGTGCGTGGAGAAGGT+AGG + chr8_1:72085376-72085395 Msa1212210:intron 50.0%
TGTAAGGAATAAGAGCCGGG+GGG - chr8_1:72085445-72085464 None:intergenic 50.0%
!! CTCTCTAGGGTGTGAATCCT+TGG + chr8_1:72085486-72085505 Msa1212210:intron 50.0%
CCACCATCCACTTCAATCCA+AGG - chr8_1:72085506-72085525 None:intergenic 50.0%
CCTTGGATTGAAGTGGATGG+TGG + chr8_1:72085503-72085522 Msa1212210:CDS 50.0%
ATTTGGCAGGTGATTGAGGC+TGG + chr8_1:72085908-72085927 Msa1212210:intron 50.0%
!! GTTGCTGGTTCTGCTGTGTT+TGG + chr8_1:72085944-72085963 Msa1212210:CDS 50.0%
GAGGCCTTTCACACAGAAAC+TGG - chr8_1:72086128-72086147 None:intergenic 50.0%
AAATGGATCCGATACCACGG+AGG - chr8_1:72086147-72086166 None:intergenic 50.0%
GCTGCATGTTTGCACCATCA+AGG + chr8_1:72086179-72086198 Msa1212210:intron 50.0%
TCATGGTCAGCAGGCCAATT+AGG + chr8_1:72086506-72086525 Msa1212210:three_prime_UTR 50.0%
CACCACCAGCAATTTCTCTC+TGG + chr8_1:72086542-72086561 Msa1212210:three_prime_UTR 50.0%
CAGTTTCATCCCTAGCACCA+TGG + chr8_1:72086796-72086815 Msa1212210:intron 50.0%
CAGTTTCATCCCTAGCACCA+TGG + chr8_1:72086796-72086815 Msa1212210:intron 50.0%
! GTGTTGGTGGGGACTTGACT+TGG - chr8_1:72082631-72082650 None:intergenic 55.0%
! GTGGATGACACGTGTTGGTG+GGG - chr8_1:72082642-72082661 None:intergenic 55.0%
GTGTGGATGACACGTGTTGG+TGG - chr8_1:72082644-72082663 None:intergenic 55.0%
TGTGTGTGTGTGCGTGTGCA+AGG - chr8_1:72083511-72083530 None:intergenic 55.0%
AAATCTGGCACCCGCTGATC+TGG - chr8_1:72084092-72084111 None:intergenic 55.0%
! CAACTCCAGCTTTAGCTCCC+AGG - chr8_1:72084515-72084534 None:intergenic 55.0%
GCTGGAGTTGTCCTAAACCC+TGG + chr8_1:72084525-72084544 Msa1212210:CDS 55.0%
AACTCTGGCCACCAAAGCCA+GGG - chr8_1:72085318-72085337 None:intergenic 55.0%
AAACTCTGGCCACCAAAGCC+AGG - chr8_1:72085319-72085338 None:intergenic 55.0%
TGAGGCTGGAGCTAATGCAC+TGG + chr8_1:72085922-72085941 Msa1212210:CDS 55.0%
!! GGAGCTAATGCACTGGTTGC+TGG + chr8_1:72085929-72085948 Msa1212210:CDS 55.0%
TTCTGTGTGAAAGGCCTCCG+TGG + chr8_1:72086130-72086149 Msa1212210:exon 55.0%
GTGAAAGGCCTCCGTGGTAT+CGG + chr8_1:72086136-72086155 Msa1212210:exon 55.0%
GTCAGCAGGCCAATTAGGCA+TGG + chr8_1:72086511-72086530 Msa1212210:three_prime_UTR 55.0%
TCTCGCACCCAACACGACCA+AGG - chr8_1:72082546-72082565 None:intergenic 60.0%
!! GGTGCTGGCAGTGGTTGACT+TGG + chr8_1:72085273-72085292 Msa1212210:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 72082487 72087006 72082487 ID=Msa1212210;Name=Msa1212210
chr8_1 mRNA 72082487 72087006 72082487 ID=Msa1212210-mRNA-1;Parent=Msa1212210;Name=Msa1212210-mRNA-1;_AED=0.16;_eAED=0.16;_QI=311|1|1|1|0.8|0.72|11|477|282
chr8_1 exon 72082487 72082910 72082487 ID=Msa1212210-mRNA-1:exon:24309;Parent=Msa1212210-mRNA-1
chr8_1 exon 72083613 72083727 72083613 ID=Msa1212210-mRNA-1:exon:24310;Parent=Msa1212210-mRNA-1
chr8_1 exon 72083855 72083995 72083855 ID=Msa1212210-mRNA-1:exon:24311;Parent=Msa1212210-mRNA-1
chr8_1 exon 72084077 72084190 72084077 ID=Msa1212210-mRNA-1:exon:24312;Parent=Msa1212210-mRNA-1
chr8_1 exon 72084504 72084582 72084504 ID=Msa1212210-mRNA-1:exon:24313;Parent=Msa1212210-mRNA-1
chr8_1 exon 72085284 72085393 72085284 ID=Msa1212210-mRNA-1:exon:24314;Parent=Msa1212210-mRNA-1
chr8_1 exon 72085494 72085550 72085494 ID=Msa1212210-mRNA-1:exon:24315;Parent=Msa1212210-mRNA-1
chr8_1 exon 72085917 72085986 72085917 ID=Msa1212210-mRNA-1:exon:24316;Parent=Msa1212210-mRNA-1
chr8_1 exon 72086090 72086174 72086090 ID=Msa1212210-mRNA-1:exon:24317;Parent=Msa1212210-mRNA-1
chr8_1 exon 72086499 72086783 72086499 ID=Msa1212210-mRNA-1:exon:24318;Parent=Msa1212210-mRNA-1
chr8_1 exon 72086850 72087006 72086850 ID=Msa1212210-mRNA-1:exon:24319;Parent=Msa1212210-mRNA-1
chr8_1 five_prime_UTR 72082487 72082797 72082487 ID=Msa1212210-mRNA-1:five_prime_utr;Parent=Msa1212210-mRNA-1
chr8_1 CDS 72082798 72082910 72082798 ID=Msa1212210-mRNA-1:cds;Parent=Msa1212210-mRNA-1
chr8_1 CDS 72083613 72083727 72083613 ID=Msa1212210-mRNA-1:cds;Parent=Msa1212210-mRNA-1
chr8_1 CDS 72083855 72083995 72083855 ID=Msa1212210-mRNA-1:cds;Parent=Msa1212210-mRNA-1
chr8_1 CDS 72084077 72084190 72084077 ID=Msa1212210-mRNA-1:cds;Parent=Msa1212210-mRNA-1
chr8_1 CDS 72084504 72084582 72084504 ID=Msa1212210-mRNA-1:cds;Parent=Msa1212210-mRNA-1
chr8_1 CDS 72085284 72085393 72085284 ID=Msa1212210-mRNA-1:cds;Parent=Msa1212210-mRNA-1
chr8_1 CDS 72085494 72085550 72085494 ID=Msa1212210-mRNA-1:cds;Parent=Msa1212210-mRNA-1
chr8_1 CDS 72085917 72085986 72085917 ID=Msa1212210-mRNA-1:cds;Parent=Msa1212210-mRNA-1
chr8_1 CDS 72086090 72086139 72086090 ID=Msa1212210-mRNA-1:cds;Parent=Msa1212210-mRNA-1
chr8_1 three_prime_UTR 72086140 72086174 72086140 ID=Msa1212210-mRNA-1:three_prime_utr;Parent=Msa1212210-mRNA-1
chr8_1 three_prime_UTR 72086499 72086783 72086499 ID=Msa1212210-mRNA-1:three_prime_utr;Parent=Msa1212210-mRNA-1
chr8_1 three_prime_UTR 72086850 72087006 72086850 ID=Msa1212210-mRNA-1:three_prime_utr;Parent=Msa1212210-mRNA-1
Gene Sequence

>Msa1212210

ATGGCTTCAACTACTACAACTTCTCTATGTTCCTCTACCCTCCAATCTCAGATCAATGGACTTTCCCTTCACAAGAATTCTCTCTTCCATCCCCGTTCTCTCACTTTCTCAAGGAGGAAAATTTCAACTGTGGTTAAGGCTTCATCTCGTGTTGACAAGTTTTCAAAAAGTGATATCATTGTTTCTCCATCTATTCTTTCCGCCAACTTTGCAAAATTGGGAGAACAGGTAAAAGCAGTAGAGTTGGCTGGTTGTGATTGGATTCATGTTGATGTTATGGATGGTCGCTTTGTCCCAAATATTACTATTGGACCTCTTGTGGTTGATGCATTGCGCCCTGTGACAGATTTACCTTTGGATGTCCACCTGATGATTGTAGAACCAGATCAGCGGGTGCCAGATTTCATCAAAGCAGGAGCTGACATTGTCAGTATTCATTGTGAACAATCTTCCACTATCCATTTGCATCGTGCAATTAATCAAGTAAAAAGCCTGGGAGCTAAAGCTGGAGTTGTCCTAAACCCTGGTACTCCGCTAAGTGCAATAGAATATGTTCTTGATGTGGTTGACTTGGTCTTAATTATGTCTGTAAACCCTGGCTTTGGTGGCCAGAGTTTTATCGAGAGCCAAGTAAAGAAAATTTCTGATTTGAGAAGATTGTGCGTGGAGAAGGGTGTGAATCCTTGGATTGAAGTGGATGGTGGGGTTACCCCAGCAAATGCTTACAAGGTGATTGAGGCTGGAGCTAATGCACTGGTTGCTGGTTCTGCTGTGTTTGGAGCTAAAGATTATGCTGAAGCTATAAAAGGAATAAAAGCTAGCAAAAGACCTGAGCCAGTTTCTGTGTGA

Protein sequence

>Msa1212210

MASTTTTSLCSSTLQSQINGLSLHKNSLFHPRSLTFSRRKISTVVKASSRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQRVPDFIKAGADIVSIHCEQSSTIHLHRAINQVKSLGAKAGVVLNPGTPLSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCVEKGVNPWIEVDGGVTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPEPVSV*