Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548410 | XP_013456124.1 | 97.394 | 307 | 8 | 0 | 1 | 307 | 1 | 307 | 0.0 | 619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548410 | sp|Q8CHU3|EPN2_MOUSE | 32.240 | 183 | 100 | 4 | 33 | 208 | 20 | 185 | 2.97e-20 | 94.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548410 | A0A072UWA8 | 97.394 | 307 | 8 | 0 | 1 | 307 | 1 | 307 | 0.0 | 619 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0548410 | -0.822549 | 2.232623e-53 | -8.615850e-47 |
| Msa0007810 | Msa0548410 | -0.816812 | 4.560441e-52 | -8.615850e-47 |
| Msa0011410 | Msa0548410 | -0.812797 | 3.539159e-51 | -8.615850e-47 |
| Msa0011440 | Msa0548410 | -0.808593 | 2.869604e-50 | -8.615850e-47 |
| Msa0011450 | Msa0548410 | -0.805643 | 1.208929e-49 | -8.615850e-47 |
| Msa0027020 | Msa0548410 | -0.816767 | 4.665801e-52 | -8.615850e-47 |
| Msa0033670 | Msa0548410 | -0.806775 | 6.982439e-50 | -8.615850e-47 |
| Msa0034590 | Msa0548410 | -0.804962 | 1.679520e-49 | -8.615850e-47 |
| Msa0042950 | Msa0548410 | -0.800298 | 1.539158e-48 | -8.615850e-47 |
| Msa0046020 | Msa0548410 | -0.822478 | 2.318780e-53 | -8.615850e-47 |
| Msa0052780 | Msa0548410 | 0.811585 | 6.506082e-51 | -8.615850e-47 |
| Msa0056230 | Msa0548410 | -0.820671 | 6.063334e-53 | -8.615850e-47 |
| Msa0065670 | Msa0548410 | -0.802264 | 6.093787e-49 | -8.615850e-47 |
| Msa0066890 | Msa0548410 | -0.813397 | 2.613733e-51 | -8.615850e-47 |
| Msa0067370 | Msa0548410 | -0.807185 | 5.720234e-50 | -8.615850e-47 |
| Msa0075990 | Msa0548410 | -0.800742 | 1.249244e-48 | -8.615850e-47 |
| Msa0089700 | Msa0548410 | -0.806044 | 9.959512e-50 | -8.615850e-47 |
| Msa0090870 | Msa0548410 | 0.809524 | 1.813348e-50 | -8.615850e-47 |
| Msa0093230 | Msa0548410 | 0.807614 | 4.636975e-50 | -8.615850e-47 |
| Msa0095810 | Msa0548410 | -0.824619 | 7.315889e-54 | -8.615850e-47 |
| Msa0095940 | Msa0548410 | 0.849751 | 2.644331e-60 | -8.615850e-47 |
| Msa0097570 | Msa0548410 | 0.811789 | 5.871673e-51 | -8.615850e-47 |
| Msa0111110 | Msa0548410 | -0.819059 | 1.416643e-52 | -8.615850e-47 |
| Msa0112880 | Msa0548410 | -0.811785 | 5.885916e-51 | -8.615850e-47 |
| Msa0120100 | Msa0548410 | -0.804850 | 1.772362e-49 | -8.615850e-47 |
| Msa0120160 | Msa0548410 | -0.813584 | 2.376870e-51 | -8.615850e-47 |
| Msa0127350 | Msa0548410 | -0.822197 | 2.693871e-53 | -8.615850e-47 |
| Msa0129820 | Msa0548410 | -0.802174 | 6.357629e-49 | -8.615850e-47 |
| Msa0133140 | Msa0548410 | -0.838772 | 2.357864e-57 | -8.615850e-47 |
| Msa0136870 | Msa0548410 | -0.806838 | 6.771073e-50 | -8.615850e-47 |
| Msa0145990 | Msa0548410 | -0.801495 | 8.763018e-49 | -8.615850e-47 |
| Msa0150640 | Msa0548410 | 0.834558 | 2.795578e-56 | -8.615850e-47 |
| Msa0151380 | Msa0548410 | -0.816568 | 5.172154e-52 | -8.615850e-47 |
| Msa0151510 | Msa0548410 | -0.803538 | 3.322917e-49 | -8.615850e-47 |
| Msa0154880 | Msa0548410 | -0.818721 | 1.691223e-52 | -8.615850e-47 |
| Msa0154890 | Msa0548410 | -0.803814 | 2.913152e-49 | -8.615850e-47 |
| Msa0158890 | Msa0548410 | -0.807931 | 3.971234e-50 | -8.615850e-47 |
| Msa0159240 | Msa0548410 | -0.800573 | 1.352626e-48 | -8.615850e-47 |
| Msa0166260 | Msa0548410 | 0.804090 | 2.552157e-49 | -8.615850e-47 |
| Msa0167160 | Msa0548410 | -0.825715 | 4.030567e-54 | -8.615850e-47 |
| Msa0168770 | Msa0548410 | -0.825769 | 3.912718e-54 | -8.615850e-47 |
| Msa0175240 | Msa0548410 | -0.816775 | 4.647570e-52 | -8.615850e-47 |
| Msa0183310 | Msa0548410 | -0.838311 | 3.101393e-57 | -8.615850e-47 |
| Msa0185040 | Msa0548410 | 0.805326 | 1.408962e-49 | -8.615850e-47 |
| Msa0186400 | Msa0548410 | -0.823824 | 1.125144e-53 | -8.615850e-47 |
| Msa0187590 | Msa0548410 | -0.821111 | 4.803474e-53 | -8.615850e-47 |
| Msa0195810 | Msa0548410 | -0.802248 | 6.137732e-49 | -8.615850e-47 |
| Msa0203090 | Msa0548410 | 0.815396 | 9.446735e-52 | -8.615850e-47 |
| Msa0212950 | Msa0548410 | -0.808079 | 3.693747e-50 | -8.615850e-47 |
| Msa0216150 | Msa0548410 | -0.808032 | 3.779361e-50 | -8.615850e-47 |
| Msa0223500 | Msa0548410 | -0.813687 | 2.256053e-51 | -8.615850e-47 |
| Msa0224870 | Msa0548410 | 0.807676 | 4.500186e-50 | -8.615850e-47 |
| Msa0225190 | Msa0548410 | -0.802396 | 5.722295e-49 | -8.615850e-47 |
| Msa0225280 | Msa0548410 | -0.809912 | 1.496391e-50 | -8.615850e-47 |
| Msa0368450 | Msa0548410 | -0.805613 | 1.226774e-49 | -8.615850e-47 |
| Msa0370360 | Msa0548410 | 0.827132 | 1.851900e-54 | -8.615850e-47 |
| Msa0378440 | Msa0548410 | -0.824887 | 6.325967e-54 | -8.615850e-47 |
| Msa0380450 | Msa0548410 | -0.800398 | 1.468797e-48 | -8.615850e-47 |
| Msa0382060 | Msa0548410 | -0.819226 | 1.298091e-52 | -8.615850e-47 |
| Msa0383900 | Msa0548410 | 0.813952 | 1.972416e-51 | -8.615850e-47 |
| Msa0383960 | Msa0548410 | 0.807735 | 4.372007e-50 | -8.615850e-47 |
| Msa0386230 | Msa0548410 | -0.806965 | 6.367126e-50 | -8.615850e-47 |
| Msa0387630 | Msa0548410 | -0.800564 | 1.358253e-48 | -8.615850e-47 |
| Msa0415100 | Msa0548410 | 0.802023 | 6.829163e-49 | -8.615850e-47 |
| Msa0415760 | Msa0548410 | -0.811345 | 7.332773e-51 | -8.615850e-47 |
| Msa0419150 | Msa0548410 | -0.808270 | 3.363773e-50 | -8.615850e-47 |
| Msa0427890 | Msa0548410 | -0.814618 | 1.405390e-51 | -8.615850e-47 |
| Msa0428270 | Msa0548410 | -0.802368 | 5.798230e-49 | -8.615850e-47 |
| Msa0433890 | Msa0548410 | -0.804888 | 1.740346e-49 | -8.615850e-47 |
| Msa0434300 | Msa0548410 | 0.824068 | 9.862517e-54 | -8.615850e-47 |
| Msa0434400 | Msa0548410 | 0.817046 | 4.040145e-52 | -8.615850e-47 |
| Msa0437820 | Msa0548410 | -0.824144 | 9.462108e-54 | -8.615850e-47 |
| Msa0442860 | Msa0548410 | 0.833661 | 4.692143e-56 | -8.615850e-47 |
| Msa0444770 | Msa0548410 | -0.825038 | 5.829588e-54 | -8.615850e-47 |
| Msa0460510 | Msa0548410 | -0.818429 | 1.969697e-52 | -8.615850e-47 |
| Msa0461620 | Msa0548410 | -0.809045 | 2.296690e-50 | -8.615850e-47 |
| Msa0463030 | Msa0548410 | -0.801099 | 1.056500e-48 | -8.615850e-47 |
| Msa0464980 | Msa0548410 | -0.808082 | 3.689174e-50 | -8.615850e-47 |
| Msa0471360 | Msa0548410 | 0.815185 | 1.052157e-51 | -8.615850e-47 |
| Msa0471850 | Msa0548410 | 0.822354 | 2.477531e-53 | -8.615850e-47 |
| Msa0473740 | Msa0548410 | -0.800242 | 1.579780e-48 | -8.615850e-47 |
| Msa0474120 | Msa0548410 | -0.820656 | 6.112160e-53 | -8.615850e-47 |
| Msa0474660 | Msa0548410 | -0.812482 | 4.146839e-51 | -8.615850e-47 |
| Msa0476570 | Msa0548410 | -0.806722 | 7.165014e-50 | -8.615850e-47 |
| Msa0476890 | Msa0548410 | -0.812433 | 4.249346e-51 | -8.615850e-47 |
| Msa0478740 | Msa0548410 | -0.815250 | 1.017851e-51 | -8.615850e-47 |
| Msa0242720 | Msa0548410 | 0.852570 | 4.232256e-61 | -8.615850e-47 |
| Msa0246140 | Msa0548410 | 0.819206 | 1.311881e-52 | -8.615850e-47 |
| Msa0253230 | Msa0548410 | -0.823976 | 1.036157e-53 | -8.615850e-47 |
| Msa0261350 | Msa0548410 | -0.814786 | 1.289969e-51 | -8.615850e-47 |
| Msa0262350 | Msa0548410 | -0.816409 | 5.614300e-52 | -8.615850e-47 |
| Msa0264580 | Msa0548410 | -0.812567 | 3.973863e-51 | -8.615850e-47 |
| Msa0265480 | Msa0548410 | 0.801908 | 7.211923e-49 | -8.615850e-47 |
| Msa0265650 | Msa0548410 | 0.836153 | 1.105828e-56 | -8.615850e-47 |
| Msa0266330 | Msa0548410 | -0.803078 | 4.137641e-49 | -8.615850e-47 |
| Msa0282960 | Msa0548410 | 0.800582 | 1.347010e-48 | -8.615850e-47 |
| Msa0285890 | Msa0548410 | 0.810346 | 1.206774e-50 | -8.615850e-47 |
| Msa0288170 | Msa0548410 | -0.806302 | 8.785343e-50 | -8.615850e-47 |
| Msa0293720 | Msa0548410 | 0.825028 | 5.858302e-54 | -8.615850e-47 |
| Msa0294200 | Msa0548410 | 0.836764 | 7.729627e-57 | -8.615850e-47 |
| Msa0295030 | Msa0548410 | -0.818969 | 1.484771e-52 | -8.615850e-47 |
| Msa0298820 | Msa0548410 | -0.803324 | 3.681527e-49 | -8.615850e-47 |
| Msa0299130 | Msa0548410 | -0.815711 | 8.036407e-52 | -8.615850e-47 |
| Msa0300130 | Msa0548410 | -0.821884 | 3.183985e-53 | -8.615850e-47 |
| Msa0303690 | Msa0548410 | -0.807103 | 5.951344e-50 | -8.615850e-47 |
| Msa0303900 | Msa0548410 | 0.811984 | 5.325880e-51 | -8.615850e-47 |
| Msa0319680 | Msa0548410 | 0.817836 | 2.681835e-52 | -8.615850e-47 |
| Msa0320170 | Msa0548410 | 0.888857 | 4.068669e-73 | -8.615850e-47 |
| Msa0324810 | Msa0548410 | 0.809805 | 1.577883e-50 | -8.615850e-47 |
| Msa0333770 | Msa0548410 | 0.801771 | 7.693425e-49 | -8.615850e-47 |
| Msa0336550 | Msa0548410 | -0.812666 | 3.780037e-51 | -8.615850e-47 |
| Msa0337610 | Msa0548410 | -0.802428 | 5.637194e-49 | -8.615850e-47 |
| Msa0339970 | Msa0548410 | -0.811666 | 6.246711e-51 | -8.615850e-47 |
| Msa0340370 | Msa0548410 | 0.822502 | 2.288633e-53 | -8.615850e-47 |
| Msa0340700 | Msa0548410 | -0.831932 | 1.261136e-55 | -8.615850e-47 |
| Msa0345890 | Msa0548410 | 0.805070 | 1.594018e-49 | -8.615850e-47 |
| Msa0490100 | Msa0548410 | 0.806251 | 9.007337e-50 | -8.615850e-47 |
| Msa0492330 | Msa0548410 | -0.805070 | 1.594394e-49 | -8.615850e-47 |
| Msa0497690 | Msa0548410 | 0.822600 | 2.172085e-53 | -8.615850e-47 |
| Msa0522140 | Msa0548410 | 0.819922 | 9.006237e-53 | -8.615850e-47 |
| Msa0522170 | Msa0548410 | 0.804231 | 2.386063e-49 | -8.615850e-47 |
| Msa0523420 | Msa0548410 | -0.826523 | 2.588731e-54 | -8.615850e-47 |
| Msa0534610 | Msa0548410 | 0.802978 | 4.339707e-49 | -8.615850e-47 |
| Msa0535400 | Msa0548410 | 0.805879 | 1.078391e-49 | -8.615850e-47 |
| Msa0539040 | Msa0548410 | 0.805421 | 1.346147e-49 | -8.615850e-47 |
| Msa0544390 | Msa0548410 | -0.800591 | 1.341255e-48 | -8.615850e-47 |
| Msa0548410 | Msa0548420 | 0.845523 | 3.850806e-59 | -8.615850e-47 |
| Msa0548410 | Msa0550980 | -0.830250 | 3.263895e-55 | -8.615850e-47 |
| Msa0548410 | Msa0550990 | -0.835992 | 1.214477e-56 | -8.615850e-47 |
| Msa0548410 | Msa0554770 | -0.810221 | 1.283851e-50 | -8.615850e-47 |
| Msa0548410 | Msa0557440 | -0.834686 | 2.596463e-56 | -8.615850e-47 |
| Msa0548410 | Msa0562240 | 0.810156 | 1.325980e-50 | -8.615850e-47 |
| Msa0548410 | Msa0565180 | 0.808720 | 2.695790e-50 | -8.615850e-47 |
| Msa0548410 | Msa0565370 | -0.810823 | 9.517952e-51 | -8.615850e-47 |
| Msa0548410 | Msa0566940 | -0.800775 | 1.230109e-48 | -8.615850e-47 |
| Msa0548410 | Msa0576560 | 0.802716 | 4.916582e-49 | -8.615850e-47 |
| Msa0548410 | Msa0580410 | -0.804347 | 2.256629e-49 | -8.615850e-47 |
| Msa0548410 | Msa0580890 | -0.827378 | 1.616924e-54 | -8.615850e-47 |
| Msa0548410 | Msa0581350 | 0.812162 | 4.870985e-51 | -8.615850e-47 |
| Msa0548410 | Msa0583270 | -0.800111 | 1.680075e-48 | -8.615850e-47 |
| Msa0548410 | Msa0590620 | -0.806085 | 9.760349e-50 | -8.615850e-47 |
| Msa0548410 | Msa0590810 | 0.811222 | 7.799118e-51 | -8.615850e-47 |
| Msa0548410 | Msa0597180 | 0.803144 | 4.010152e-49 | -8.615850e-47 |
| Msa0548410 | Msa0597370 | -0.817356 | 3.440625e-52 | -8.615850e-47 |
| Msa0548410 | Msa0603300 | 0.911023 | 9.711852e-83 | -8.615850e-47 |
| Msa0548410 | Msa0603310 | 0.851467 | 8.710403e-61 | -8.615850e-47 |
| Msa0548410 | Msa0606340 | -0.831477 | 1.632716e-55 | -8.615850e-47 |
| Msa0548410 | Msa0606350 | -0.807091 | 5.987005e-50 | -8.615850e-47 |
| Msa0548410 | Msa0611060 | 0.830576 | 2.717400e-55 | -8.615850e-47 |
| Msa0548410 | Msa0615070 | 0.801560 | 8.499595e-49 | -8.615850e-47 |
| Msa0548410 | Msa0616890 | -0.801789 | 7.630249e-49 | -8.615850e-47 |
| Msa0548410 | Msa0619030 | -0.837895 | 3.967654e-57 | -8.615850e-47 |
| Msa0548410 | Msa0622800 | -0.809758 | 1.614811e-50 | -8.615850e-47 |
| Msa0548410 | Msa0637590 | 0.800380 | 1.481236e-48 | -8.615850e-47 |
| Msa0548410 | Msa0637930 | -0.825976 | 3.493692e-54 | -8.615850e-47 |
| Msa0548410 | Msa0638010 | -0.810142 | 1.335126e-50 | -8.615850e-47 |
| Msa0548410 | Msa0644330 | 0.834023 | 3.808739e-56 | -8.615850e-47 |
| Msa0548410 | Msa0644340 | 0.847542 | 1.082510e-59 | -8.615850e-47 |
| Msa0548410 | Msa0651000 | -0.819060 | 1.415706e-52 | -8.615850e-47 |
| Msa0548410 | Msa0655940 | 0.814046 | 1.880891e-51 | -8.615850e-47 |
| Msa0548410 | Msa0657340 | 0.813613 | 2.342471e-51 | -8.615850e-47 |
| Msa0548410 | Msa0666950 | 0.802890 | 4.526447e-49 | -8.615850e-47 |
| Msa0548410 | Msa0667670 | -0.804962 | 1.679015e-49 | -8.615850e-47 |
| Msa0548410 | Msa0669350 | 0.801816 | 7.532185e-49 | -8.615850e-47 |
| Msa0548410 | Msa0676570 | -0.821453 | 4.004877e-53 | -8.615850e-47 |
| Msa0548410 | Msa0679220 | 0.809275 | 2.050526e-50 | -8.615850e-47 |
| Msa0548410 | Msa0684130 | 0.889512 | 2.265915e-73 | -8.615850e-47 |
| Msa0548410 | Msa0690100 | -0.835253 | 1.868282e-56 | -8.615850e-47 |
| Msa0548410 | Msa0695250 | -0.838076 | 3.565114e-57 | -8.615850e-47 |
| Msa0548410 | Msa0699170 | 0.810725 | 9.994686e-51 | -8.615850e-47 |
| Msa0548410 | Msa0699390 | 0.827428 | 1.573446e-54 | -8.615850e-47 |
| Msa0548410 | Msa0699800 | 0.804784 | 1.829141e-49 | -8.615850e-47 |
| Msa0548410 | Msa0701430 | 0.810559 | 1.085088e-50 | -8.615850e-47 |
| Msa0548410 | Msa0701800 | -0.818190 | 2.230777e-52 | -8.615850e-47 |
| Msa0548410 | Msa0707860 | -0.801089 | 1.061540e-48 | -8.615850e-47 |
| Msa0548410 | Msa0723770 | 0.820868 | 5.462596e-53 | -8.615850e-47 |
| Msa0548410 | Msa0729740 | -0.827873 | 1.230244e-54 | -8.615850e-47 |
| Msa0548410 | Msa0731580 | 0.828236 | 1.005574e-54 | -8.615850e-47 |
| Msa0548410 | Msa0736560 | 0.828294 | 9.739646e-55 | -8.615850e-47 |
| Msa0548410 | Msa0739820 | -0.819304 | 1.245819e-52 | -8.615850e-47 |
| Msa0548410 | Msa0742370 | -0.823045 | 1.710830e-53 | -8.615850e-47 |
| Msa0548410 | Msa0743370 | 0.816998 | 4.141817e-52 | -8.615850e-47 |
| Msa0548410 | Msa0744640 | 0.808223 | 3.441578e-50 | -8.615850e-47 |
| Msa0548410 | Msa0744710 | 0.854406 | 1.257305e-61 | -8.615850e-47 |
| Msa0548410 | Msa0750830 | 0.803144 | 4.010653e-49 | -8.615850e-47 |
| Msa0548410 | Msa0752490 | -0.808030 | 3.784045e-50 | -8.615850e-47 |
| Msa0548410 | Msa0771810 | 0.800097 | 1.690663e-48 | -8.615850e-47 |
| Msa0548410 | Msa0779450 | -0.808348 | 3.236880e-50 | -8.615850e-47 |
| Msa0548410 | Msa0788450 | -0.823318 | 1.477448e-53 | -8.615850e-47 |
| Msa0548410 | Msa0793130 | -0.824205 | 9.156814e-54 | -8.615850e-47 |
| Msa0548410 | Msa0794900 | -0.805935 | 1.049760e-49 | -8.615850e-47 |
| Msa0548410 | Msa0795910 | -0.803774 | 2.968579e-49 | -8.615850e-47 |
| Msa0548410 | Msa0800120 | 0.800152 | 1.648136e-48 | -8.615850e-47 |
| Msa0548410 | Msa0800150 | 0.819122 | 1.370834e-52 | -8.615850e-47 |
| Msa0548410 | Msa0800180 | 0.806683 | 7.304301e-50 | -8.615850e-47 |
| Msa0548410 | Msa0809920 | 0.822394 | 2.425246e-53 | -8.615850e-47 |
| Msa0548410 | Msa0820130 | -0.830875 | 2.295015e-55 | -8.615850e-47 |
| Msa0548410 | Msa0823480 | -0.839508 | 1.519161e-57 | -8.615850e-47 |
| Msa0548410 | Msa0825570 | -0.823212 | 1.564211e-53 | -8.615850e-47 |
| Msa0548410 | Msa0826240 | 0.852932 | 3.337148e-61 | -8.615850e-47 |
| Msa0548410 | Msa0826540 | -0.825293 | 5.073623e-54 | -8.615850e-47 |
| Msa0548410 | Msa0829210 | -0.811537 | 6.661583e-51 | -8.615850e-47 |
| Msa0548410 | Msa0829250 | -0.839199 | 1.827895e-57 | -8.615850e-47 |
| Msa0548410 | Msa0832950 | 0.808859 | 2.517771e-50 | -8.615850e-47 |
| Msa0548410 | Msa0833270 | 0.840868 | 6.710910e-58 | -8.615850e-47 |
| Msa0548410 | Msa0838120 | -0.802387 | 5.746348e-49 | -8.615850e-47 |
| Msa0548410 | Msa0841730 | 0.808720 | 2.695742e-50 | -8.615850e-47 |
| Msa0548410 | Msa0856080 | 0.802676 | 5.010020e-49 | -8.615850e-47 |
| Msa0548410 | Msa0860630 | -0.821059 | 4.938060e-53 | -8.615850e-47 |
| Msa0548410 | Msa0862480 | -0.827475 | 1.533127e-54 | -8.615850e-47 |
| Msa0548410 | Msa0864820 | -0.814655 | 1.379384e-51 | -8.615850e-47 |
| Msa0548410 | Msa0866060 | -0.852662 | 3.985928e-61 | -8.615850e-47 |
| Msa0548410 | Msa0869320 | -0.820056 | 8.390884e-53 | -8.615850e-47 |
| Msa0548410 | Msa0882480 | -0.821692 | 3.527880e-53 | -8.615850e-47 |
| Msa0548410 | Msa0901270 | 0.837119 | 6.272347e-57 | -8.615850e-47 |
| Msa0548410 | Msa0919120 | -0.842518 | 2.462765e-58 | -8.615850e-47 |
| Msa0548410 | Msa0925940 | 0.826810 | 2.211289e-54 | -8.615850e-47 |
| Msa0548410 | Msa0934290 | -0.811560 | 6.587561e-51 | -8.615850e-47 |
| Msa0548410 | Msa0945160 | -0.838860 | 2.236901e-57 | -8.615850e-47 |
| Msa0548410 | Msa0956600 | -0.830877 | 2.292834e-55 | -8.615850e-47 |
| Msa0548410 | Msa0964400 | -0.801775 | 7.680536e-49 | -8.615850e-47 |
| Msa0548410 | Msa0966580 | 0.873367 | 1.552975e-67 | -8.615850e-47 |
| Msa0548410 | Msa0971780 | -0.823828 | 1.122237e-53 | -8.615850e-47 |
| Msa0548410 | Msa1001120 | 0.836075 | 1.157163e-56 | -8.615850e-47 |
| Msa0548410 | Msa1002550 | -0.828295 | 9.735771e-55 | -8.615850e-47 |
| Msa0548410 | Msa1009940 | -0.806838 | 6.771073e-50 | -8.615850e-47 |
| Msa0548410 | Msa1011140 | -0.841750 | 3.932636e-58 | -8.615850e-47 |
| Msa0548410 | Msa1016580 | -0.824346 | 8.484677e-54 | -8.615850e-47 |
| Msa0548410 | Msa1026160 | -0.802640 | 5.096229e-49 | -8.615850e-47 |
| Msa0548410 | Msa1027340 | 0.858164 | 9.940191e-63 | -8.615850e-47 |
| Msa0548410 | Msa1027400 | 0.862479 | 4.921083e-64 | -8.615850e-47 |
| Msa0548410 | Msa1030210 | 0.809018 | 2.327743e-50 | -8.615850e-47 |
| Msa0548410 | Msa1031190 | -0.814088 | 1.841104e-51 | -8.615850e-47 |
| Msa0548410 | Msa1034950 | 0.820176 | 7.876888e-53 | -8.615850e-47 |
| Msa0548410 | Msa1035050 | 0.815609 | 8.470490e-52 | -8.615850e-47 |
| Msa0548410 | Msa1039150 | -0.812148 | 4.903864e-51 | -8.615850e-47 |
| Msa0548410 | Msa1039440 | -0.843325 | 1.501831e-58 | -8.615850e-47 |
| Msa0548410 | Msa1057940 | -0.802326 | 5.916498e-49 | -8.615850e-47 |
| Msa0548410 | Msa1058550 | -0.808736 | 2.674864e-50 | -8.615850e-47 |
| Msa0548410 | Msa1070370 | -0.815556 | 8.703147e-52 | -8.615850e-47 |
| Msa0548410 | Msa1075010 | 0.820460 | 6.779913e-53 | -8.615850e-47 |
| Msa0548410 | Msa1075090 | 0.834763 | 2.482879e-56 | -8.615850e-47 |
| Msa0548410 | Msa1077970 | 0.831370 | 1.735017e-55 | -8.615850e-47 |
| Msa0548410 | Msa1078120 | -0.813448 | 2.546948e-51 | -8.615850e-47 |
| Msa0548410 | Msa1083620 | -0.815124 | 1.085799e-51 | -8.615850e-47 |
| Msa0548410 | Msa1083660 | -0.801801 | 7.584816e-49 | -8.615850e-47 |
| Msa0548410 | Msa1088400 | -0.826674 | 2.383555e-54 | -8.615850e-47 |
| Msa0548410 | Msa1092310 | 0.829400 | 5.258081e-55 | -8.615850e-47 |
| Msa0548410 | Msa1094810 | 0.820117 | 8.123361e-53 | -8.615850e-47 |
| Msa0548410 | Msa1102210 | 0.806943 | 6.434076e-50 | -8.615850e-47 |
| Msa0548410 | Msa1104020 | -0.806962 | 6.374879e-50 | -8.615850e-47 |
| Msa0548410 | Msa1107220 | 0.830859 | 2.316527e-55 | -8.615850e-47 |
| Msa0548410 | Msa1110900 | 0.829768 | 4.280138e-55 | -8.615850e-47 |
| Msa0548410 | Msa1111900 | 0.800803 | 1.214144e-48 | -8.615850e-47 |
| Msa0548410 | Msa1115980 | 0.816812 | 4.559501e-52 | -8.615850e-47 |
| Msa0548410 | Msa1117770 | -0.806442 | 8.211296e-50 | -8.615850e-47 |
| Msa0548410 | Msa1119420 | -0.817971 | 2.499630e-52 | -8.615850e-47 |
| Msa0548410 | Msa1121720 | -0.825012 | 5.910235e-54 | -8.615850e-47 |
| Msa0548410 | Msa1123440 | -0.805941 | 1.046555e-49 | -8.615850e-47 |
| Msa0548410 | Msa1128520 | -0.826387 | 2.789998e-54 | -8.615850e-47 |
| Msa0548410 | Msa1128610 | -0.826082 | 3.296571e-54 | -8.615850e-47 |
| Msa0548410 | Msa1129120 | -0.820242 | 7.607660e-53 | -8.615850e-47 |
| Msa0548410 | Msa1129300 | -0.800173 | 1.632050e-48 | -8.615850e-47 |
| Msa0548410 | Msa1130150 | -0.832067 | 1.167788e-55 | -8.615850e-47 |
| Msa0548410 | Msa1132250 | -0.807416 | 5.109867e-50 | -8.615850e-47 |
| Msa0548410 | Msa1132880 | -0.804938 | 1.698517e-49 | -8.615850e-47 |
| Msa0548410 | Msa1132900 | -0.807637 | 4.586611e-50 | -8.615850e-47 |
| Msa0548410 | Msa1137750 | 0.804317 | 2.288990e-49 | -8.615850e-47 |
| Msa0548410 | Msa1150760 | 0.812388 | 4.348259e-51 | -8.615850e-47 |
| Msa0548410 | Msa1154570 | 0.857975 | 1.131141e-62 | -8.615850e-47 |
| Msa0548410 | Msa1156100 | -0.818162 | 2.263687e-52 | -8.615850e-47 |
| Msa0548410 | Msa1156120 | -0.829651 | 4.567849e-55 | -8.615850e-47 |
| Msa0548410 | Msa1157110 | 0.804547 | 2.050514e-49 | -8.615850e-47 |
| Msa0548410 | Msa1158180 | -0.812831 | 3.478806e-51 | -8.615850e-47 |
| Msa0548410 | Msa1162430 | 0.824379 | 8.335355e-54 | -8.615850e-47 |
| Msa0548410 | Msa1166470 | -0.800119 | 1.673409e-48 | -8.615850e-47 |
| Msa0548410 | Msa1173150 | 0.814404 | 1.567379e-51 | -8.615850e-47 |
| Msa0548410 | Msa1174280 | 0.804207 | 2.413241e-49 | -8.615850e-47 |
| Msa0548410 | Msa1175340 | -0.800635 | 1.313877e-48 | -8.615850e-47 |
| Msa0548410 | Msa1177650 | 0.818675 | 1.731593e-52 | -8.615850e-47 |
| Msa0548410 | Msa1197720 | 0.801563 | 8.489500e-49 | -8.615850e-47 |
| Msa0548410 | Msa1197740 | -0.828880 | 7.031384e-55 | -8.615850e-47 |
| Msa0548410 | Msa1199540 | -0.827627 | 1.408931e-54 | -8.615850e-47 |
| Msa0548410 | Msa1202110 | 0.818171 | 2.252406e-52 | -8.615850e-47 |
| Msa0548410 | Msa1204870 | -0.821448 | 4.015651e-53 | -8.615850e-47 |
| Msa0548410 | Msa1204900 | -0.808478 | 3.036449e-50 | -8.615850e-47 |
| Msa0548410 | Msa1211610 | 0.806614 | 7.552186e-50 | -8.615850e-47 |
| Msa0548410 | Msa1212150 | -0.850074 | 2.147609e-60 | -8.615850e-47 |
| Msa0548410 | Msa1212210 | -0.845949 | 2.950826e-59 | -8.615850e-47 |
| Msa0548410 | Msa1219530 | -0.840762 | 7.153608e-58 | -8.615850e-47 |
| Msa0548410 | Msa1219620 | 0.801659 | 8.110871e-49 | -8.615850e-47 |
| Msa0548410 | Msa1221270 | 0.825098 | 5.640047e-54 | -8.615850e-47 |
| Msa0548410 | Msa1235620 | -0.807460 | 5.000731e-50 | -8.615850e-47 |
| Msa0548410 | Msa1236120 | -0.806529 | 7.870718e-50 | -8.615850e-47 |
| Msa0548410 | Msa1239190 | 0.802626 | 5.130635e-49 | -8.615850e-47 |
| Msa0548410 | Msa1239210 | 0.813965 | 1.959092e-51 | -8.615850e-47 |
| Msa0548410 | Msa1241740 | 0.808514 | 2.983679e-50 | -8.615850e-47 |
| Msa0548410 | Msa1247200 | -0.804742 | 1.866320e-49 | -8.615850e-47 |
| Msa0548410 | Msa1251440 | -0.819292 | 1.254130e-52 | -8.615850e-47 |
| Msa0548410 | Msa1254870 | 0.816579 | 5.141776e-52 | -8.615850e-47 |
| Msa0548410 | Msa1256490 | -0.814242 | 1.702353e-51 | -8.615850e-47 |
| Msa0548410 | Msa1268360 | 0.800656 | 1.301215e-48 | -8.615850e-47 |
| Msa0548410 | Msa1268390 | 0.812196 | 4.787937e-51 | -8.615850e-47 |
| Msa0548410 | Msa1268420 | 0.808612 | 2.842776e-50 | -8.615850e-47 |
| Msa0548410 | Msa1277270 | -0.807268 | 5.492234e-50 | -8.615850e-47 |
| Msa0548410 | Msa1279200 | -0.813617 | 2.338107e-51 | -8.615850e-47 |
| Msa0548410 | Msa1279250 | -0.807350 | 5.276469e-50 | -8.615850e-47 |
| Msa0548410 | Msa1292060 | -0.814570 | 1.440203e-51 | -8.615850e-47 |
| Msa0548410 | Msa1296810 | -0.806862 | 6.692423e-50 | -8.615850e-47 |
| Msa0548410 | Msa1315880 | -0.805512 | 1.288160e-49 | -8.615850e-47 |
| Msa0548410 | Msa1317740 | 0.810072 | 1.382560e-50 | -8.615850e-47 |
| Msa0548410 | Msa1320160 | 0.808540 | 2.946178e-50 | -8.615850e-47 |
| Msa0548410 | Msa1328430 | 0.818211 | 2.206866e-52 | -8.615850e-47 |
| Msa0548410 | Msa1328680 | -0.816450 | 5.496259e-52 | -8.615850e-47 |
| Msa0548410 | Msa1331570 | -0.810522 | 1.105277e-50 | -8.615850e-47 |
| Msa0548410 | Msa1333220 | -0.864738 | 9.793681e-65 | -8.615850e-47 |
| Msa0548410 | Msa1338810 | -0.802649 | 5.075512e-49 | -8.615850e-47 |
| Msa0548410 | Msa1341710 | -0.818833 | 1.594615e-52 | -8.615850e-47 |
| Msa0548410 | Msa1350130 | -0.812189 | 4.805287e-51 | -8.615850e-47 |
| Msa0548410 | Msa1350590 | -0.809109 | 2.226248e-50 | -8.615850e-47 |
| Msa0548410 | Msa1352600 | -0.829933 | 3.900376e-55 | -8.615850e-47 |
| Msa0548410 | Msa1356100 | -0.825539 | 4.436042e-54 | -8.615850e-47 |
| Msa0548410 | Msa1357570 | 0.800488 | 1.408056e-48 | -8.615850e-47 |
| Msa0548410 | Msa1361580 | -0.821511 | 3.883010e-53 | -8.615850e-47 |
| Msa0548410 | Msa1361670 | -0.829132 | 6.106965e-55 | -8.615850e-47 |
| Msa0548410 | Msa1363310 | -0.800247 | 1.576044e-48 | -8.615850e-47 |
| Msa0548410 | Msa1367690 | -0.819379 | 1.197898e-52 | -8.615850e-47 |
| Msa0548410 | Msa1373420 | -0.824521 | 7.717398e-54 | -8.615850e-47 |
| Msa0548410 | Msa1381300 | -0.807841 | 4.149561e-50 | -8.615850e-47 |
| Msa0548410 | Msa1381340 | -0.801658 | 8.114144e-49 | -8.615850e-47 |
| Msa0548410 | Msa1384700 | 0.806522 | 7.895080e-50 | -8.615850e-47 |
| Msa0548410 | Msa1386580 | -0.801182 | 1.015817e-48 | -8.615850e-47 |
| Msa0548410 | Msa1386910 | -0.847679 | 9.928881e-60 | -8.615850e-47 |
| Msa0548410 | Msa1388720 | -0.817452 | 3.272914e-52 | -8.615850e-47 |
| Msa0548410 | Msa1395200 | -0.827453 | 1.551612e-54 | -8.615850e-47 |
| Msa0548410 | Msa1395380 | -0.803931 | 2.753926e-49 | -8.615850e-47 |
| Msa0548410 | Msa1397560 | -0.821313 | 4.314731e-53 | -8.615850e-47 |
| Msa0548410 | Msa1404050 | 0.858557 | 7.591265e-63 | -8.615850e-47 |
| Msa0548410 | Msa1405530 | 0.820978 | 5.155182e-53 | -8.615850e-47 |
| Msa0548410 | Msa1407160 | -0.844135 | 9.116970e-59 | -8.615850e-47 |
| Msa0548410 | Msa1408230 | -0.827887 | 1.220331e-54 | -8.615850e-47 |
| Msa0548410 | Msa1409360 | -0.838395 | 2.949403e-57 | -8.615850e-47 |
| Msa0548410 | Msa1410480 | -0.822882 | 1.867216e-53 | -8.615850e-47 |
| Msa0548410 | Msa1410500 | -0.825652 | 4.172018e-54 | -8.615850e-47 |
| Msa0548410 | Msa1415510 | -0.838082 | 3.551795e-57 | -8.615850e-47 |
| Msa0548410 | Msa1424490 | -0.819323 | 1.233745e-52 | -8.615850e-47 |
| Msa0548410 | Msa1428230 | -0.841760 | 3.908556e-58 | -8.615850e-47 |
| Msa0548410 | Msa1431510 | -0.827765 | 1.305596e-54 | -8.615850e-47 |
| Msa0548410 | Msa1432100 | -0.806590 | 7.640458e-50 | -8.615850e-47 |
| Msa0548410 | Msa1432730 | -0.807147 | 5.825956e-50 | -8.615850e-47 |
| Msa0548410 | Msa1434860 | -0.800796 | 1.218477e-48 | -8.615850e-47 |
| Msa0548410 | Msa1444130 | -0.809838 | 1.552689e-50 | -8.615850e-47 |
| Msa0548410 | Msa1444690 | -0.802104 | 6.571137e-49 | -8.615850e-47 |
| Msa0548410 | Msa1451200 | -0.818055 | 2.393480e-52 | -8.615850e-47 |
| Msa0548410 | Msa1452230 | -0.805831 | 1.103738e-49 | -8.615850e-47 |
| Msa0548410 | Msa1454300 | -0.808909 | 2.456448e-50 | -8.615850e-47 |
| Msa0548410 | Msa1457390 | -0.806128 | 9.559267e-50 | -8.615850e-47 |
| Msa0548410 | Msa1459130 | -0.822715 | 2.041857e-53 | -8.615850e-47 |
| Msa0548410 | Msa1459920 | 0.812240 | 4.682411e-51 | -8.615850e-47 |
| Msa0548410 | Msa1461840 | -0.816820 | 4.541148e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548410 | MtrunA17_Chr4g0031511 | 97.394 | 307 | 8 | 0 | 1 | 307 | 1 | 307 | 0.0 | 619 |
| Msa0548410 | MtrunA17_Chr1g0187501 | 44.311 | 167 | 93 | 0 | 7 | 173 | 8 | 174 | 1.65e-47 | 161 |
| Msa0548410 | MtrunA17_Chr7g0214661 | 32.877 | 146 | 94 | 2 | 16 | 161 | 12 | 153 | 6.33e-18 | 84.3 |
| Msa0548410 | MtrunA17_Chr1g0151921 | 30.137 | 146 | 101 | 1 | 16 | 161 | 11 | 155 | 1.18e-17 | 83.2 |
| Msa0548410 | MtrunA17_Chr7g0214591 | 30.709 | 127 | 71 | 2 | 37 | 161 | 18 | 129 | 2.69e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0548410 | AT3G46540.1 | 57.471 | 261 | 84 | 7 | 1 | 248 | 13 | 259 | 2.42e-82 | 251 |
| Msa0548410 | AT3G46540.2 | 57.471 | 261 | 84 | 7 | 1 | 248 | 1 | 247 | 2.92e-82 | 251 |
| Msa0548410 | AT3G46540.3 | 54.222 | 225 | 77 | 6 | 36 | 248 | 1 | 211 | 4.93e-62 | 197 |
| Msa0548410 | AT1G08670.1 | 45.714 | 175 | 93 | 2 | 1 | 173 | 5 | 179 | 4.76e-48 | 160 |
| Msa0548410 | AT3G23350.2 | 43.931 | 173 | 95 | 1 | 5 | 175 | 7 | 179 | 1.16e-46 | 159 |
| Msa0548410 | AT3G23350.1 | 43.931 | 173 | 95 | 1 | 5 | 175 | 6 | 178 | 1.19e-46 | 159 |
| Msa0548410 | AT1G08670.2 | 41.803 | 122 | 70 | 1 | 53 | 173 | 1 | 122 | 1.90e-28 | 108 |
| Msa0548410 | AT2G43160.4 | 28.571 | 217 | 126 | 4 | 16 | 228 | 12 | 203 | 6.16e-18 | 84.7 |
| Msa0548410 | AT2G43160.3 | 32.877 | 146 | 94 | 2 | 16 | 161 | 12 | 153 | 7.15e-18 | 84.7 |
| Msa0548410 | AT2G43160.2 | 32.877 | 146 | 94 | 2 | 16 | 161 | 12 | 153 | 7.15e-18 | 84.7 |
| Msa0548410 | AT2G43160.5 | 32.877 | 146 | 94 | 2 | 16 | 161 | 12 | 153 | 7.15e-18 | 84.7 |
| Msa0548410 | AT2G43160.1 | 32.877 | 146 | 94 | 2 | 16 | 161 | 12 | 153 | 7.15e-18 | 84.7 |
| Msa0548410 | AT5G11710.2 | 28.082 | 146 | 104 | 1 | 16 | 161 | 11 | 155 | 4.59e-16 | 79.0 |
| Msa0548410 | AT5G11710.1 | 28.082 | 146 | 104 | 1 | 16 | 161 | 11 | 155 | 4.59e-16 | 79.0 |
| Msa0548410 | AT5G11710.3 | 28.082 | 146 | 104 | 1 | 16 | 161 | 11 | 155 | 4.59e-16 | 79.0 |
| Msa0548410 | AT3G59290.1 | 35.433 | 127 | 81 | 1 | 34 | 160 | 27 | 152 | 6.71e-16 | 79.0 |
Find 73 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCCTCTGCTACACTTTC+TGG | 0.104086 | 4_1:+42444287 | None:intergenic |
| CATTTCTGTTGTTGAATTAA+AGG | 0.166107 | 4_1:+42443446 | None:intergenic |
| ATCAAGTTCTAAAGAAAATA+TGG | 0.298192 | 4_1:-42443577 | Msa0548410:CDS |
| GCGGAGAAGACGATTCTTCT+AGG | 0.298733 | 4_1:-42443500 | Msa0548410:CDS |
| TGAACTATGAAAATAGATAT+TGG | 0.301860 | 4_1:-42443252 | Msa0548410:three_prime_UTR |
| TGGAGAGTCAGAATCACTTT+TGG | 0.312508 | 4_1:-42443526 | Msa0548410:CDS |
| CTAAATTTGAAAAGAAGAAT+TGG | 0.317894 | 4_1:-42444361 | Msa0548410:CDS |
| ACCCGTTCTGATCAATATAT+TGG | 0.319311 | 4_1:+42444225 | None:intergenic |
| ATTTCTGTTGTTGAATTAAA+GGG | 0.325448 | 4_1:+42443447 | None:intergenic |
| GACAATTTGCAGGTTCAATT+GGG | 0.329268 | 4_1:-42443916 | Msa0548410:intron |
| TTATAGAGATTCTACATAAA+AGG | 0.331852 | 4_1:-42444653 | Msa0548410:intron |
| TGACAATTTGCAGGTTCAAT+TGG | 0.347533 | 4_1:-42443917 | Msa0548410:intron |
| AAAGAAACTGTGACCTTTGA+AGG | 0.351135 | 4_1:+42443275 | None:intergenic |
| ATCATCATCTTTGTATATCA+TGG | 0.354388 | 4_1:+42443632 | None:intergenic |
| TCAAGAGGTATTCAAGGTTT+CGG | 0.389050 | 4_1:-42443801 | Msa0548410:CDS |
| AAGAAAATATGGAACCTAGT+AGG | 0.398302 | 4_1:-42443566 | Msa0548410:CDS |
| CTGATTTCTTTCTCACAGTT+AGG | 0.420075 | 4_1:+42443892 | None:intergenic |
| AGAGAGAGTAATGAAACTAT+TGG | 0.421249 | 4_1:-42443871 | Msa0548410:CDS |
| AATTCATCTTTCTCAACCTT+AGG | 0.422317 | 4_1:-42443666 | Msa0548410:CDS |
| CTTGAGCATTTGTTGACTCA+TGG | 0.422333 | 4_1:-42444311 | Msa0548410:CDS |
| TCCAATATATTGATCAGAAC+GGG | 0.423953 | 4_1:-42444226 | Msa0548410:intron |
| AAGAAAGAAACCAATGTAGA+AGG | 0.430906 | 4_1:-42443827 | Msa0548410:CDS |
| CAATGATTTCTCGCGAAGAA+TGG | 0.431381 | 4_1:+42443746 | None:intergenic |
| ATGATAGAAGAGGCAACTAA+TGG | 0.435665 | 4_1:-42444753 | Msa0548410:CDS |
| AAGACGATTCTTCTAGGCTT+GGG | 0.437856 | 4_1:-42443494 | Msa0548410:CDS |
| TCCTTGCTTTCTGCTAGAGA+TGG | 0.439226 | 4_1:-42443411 | Msa0548410:CDS |
| ATATACAAAGATGATGATAT+AGG | 0.448838 | 4_1:-42443627 | Msa0548410:CDS |
| CTCAAACAACTACGAAGATC+AGG | 0.449845 | 4_1:-42443694 | Msa0548410:CDS |
| CTTACACAATGTATAAATAG+AGG | 0.454200 | 4_1:+42443218 | None:intergenic |
| AAATCATTGCCAACCACATT+CGG | 0.454765 | 4_1:-42443732 | Msa0548410:CDS |
| AAGTTCCACACCTCCCTACT+AGG | 0.456583 | 4_1:+42443552 | None:intergenic |
| AGGTTATCAAGAGGTATTCA+AGG | 0.457152 | 4_1:-42443807 | Msa0548410:CDS |
| GAAGACGATTCTTCTAGGCT+TGG | 0.466472 | 4_1:-42443495 | Msa0548410:CDS |
| AGAAAATATGGAACCTAGTA+GGG | 0.473708 | 4_1:-42443565 | Msa0548410:CDS |
| GATCTGAGGGTTACAGTAGT+TGG | 0.473866 | 4_1:+42444717 | None:intergenic |
| CACAATCAAGGAATTGTAAG+AGG | 0.479866 | 4_1:+42444334 | None:intergenic |
| TCGCGAAGAATGGCTTGTGT+TGG | 0.484587 | 4_1:+42443756 | None:intergenic |
| TAGTAGGGAGGTGTGGAACT+TGG | 0.490662 | 4_1:-42443550 | Msa0548410:CDS |
| CTCTTGATAACCTTCTACAT+TGG | 0.492948 | 4_1:+42443817 | None:intergenic |
| TGCCTTTGAAATTGATCTGA+GGG | 0.499582 | 4_1:+42444704 | None:intergenic |
| GTTACAGTAGTTGGTGCCCA+TGG | 0.502809 | 4_1:+42444726 | None:intergenic |
| AGGGAGGTGTGGAACTTGGA+TGG | 0.503033 | 4_1:-42443546 | Msa0548410:CDS |
| TAACAAGCTCACAGTTCTGC+AGG | 0.506386 | 4_1:+42444910 | None:intergenic |
| CAAATGCTCAAGCACAATCA+AGG | 0.506589 | 4_1:+42444322 | None:intergenic |
| TATATTGGAAACCTTTCAGC+TGG | 0.516997 | 4_1:+42444240 | None:intergenic |
| TTGGTAGAACCTCCCTTCAA+AGG | 0.523738 | 4_1:-42443288 | Msa0548410:three_prime_UTR |
| CTGCCTTTGAAATTGATCTG+AGG | 0.525860 | 4_1:+42444703 | None:intergenic |
| AGGCAACTAATGGAAATCCA+TGG | 0.532106 | 4_1:-42444743 | Msa0548410:CDS |
| GTAATGAAACTATTGGAAGA+AGG | 0.539452 | 4_1:-42443864 | Msa0548410:CDS |
| ATGTTTATTTCCTTCCTCAA+AGG | 0.541875 | 4_1:+42445061 | None:intergenic |
| GCTAGAGATGGAATACTACA+AGG | 0.551404 | 4_1:-42443399 | Msa0548410:CDS |
| TTCCAATATATTGATCAGAA+CGG | 0.554896 | 4_1:-42444227 | Msa0548410:CDS |
| GATGTTATTGACCAGCTGAA+AGG | 0.568995 | 4_1:-42444251 | Msa0548410:CDS |
| TCCATCTCTAGCAGAAAGCA+AGG | 0.572809 | 4_1:+42443410 | None:intergenic |
| TTTCTGTTGTTGAATTAAAG+GGG | 0.580526 | 4_1:+42443448 | None:intergenic |
| AATTTGAAAAGAAGAATTGG+AGG | 0.586374 | 4_1:-42444358 | Msa0548410:CDS |
| ACAATTTGCAGGTTCAATTG+GGG | 0.587617 | 4_1:-42443915 | Msa0548410:intron |
| TTGAGCTAGATGATTATAGG+AGG | 0.590229 | 4_1:-42444677 | Msa0548410:CDS |
| GGCAACTAATGGAAATCCAT+GGG | 0.593719 | 4_1:-42444742 | Msa0548410:CDS |
| AAGAAACTGTGACCTTTGAA+GGG | 0.599886 | 4_1:+42443276 | None:intergenic |
| TGAATTACATCTACCGAATG+TGG | 0.602951 | 4_1:+42443719 | None:intergenic |
| AACCCTCAGATCAATTTCAA+AGG | 0.604793 | 4_1:-42444706 | Msa0548410:CDS |
| ATTTGAAAAGAAGAATTGGA+GGG | 0.607233 | 4_1:-42444357 | Msa0548410:CDS |
| ACGATTCTTCTAGGCTTGGG+AGG | 0.614811 | 4_1:-42443491 | Msa0548410:CDS |
| TTACATCTACCGAATGTGGT+TGG | 0.615754 | 4_1:+42443723 | None:intergenic |
| GGAAGAAGGAAATCTTCTCA+AGG | 0.620593 | 4_1:-42443850 | Msa0548410:CDS |
| AAACTGTGACCTTTGAAGGG+AGG | 0.635055 | 4_1:+42443279 | None:intergenic |
| TGGAACCTAGTAGGGAGGTG+TGG | 0.635291 | 4_1:-42443557 | Msa0548410:CDS |
| TGGACCAGAAAGTGTAGCAG+AGG | 0.637626 | 4_1:-42444291 | Msa0548410:CDS |
| CAATGTAGAAGGTTATCAAG+AGG | 0.650694 | 4_1:-42443816 | Msa0548410:CDS |
| AAATATGGAACCTAGTAGGG+AGG | 0.663757 | 4_1:-42443562 | Msa0548410:CDS |
| CTAGAGATGGAATACTACAA+GGG | 0.670524 | 4_1:-42443398 | Msa0548410:CDS |
| TCTTTGAAGAATGATAGAAG+AGG | 0.674445 | 4_1:-42444763 | Msa0548410:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTGAGTAAAAAAAATA+AGG | + | chr4_1:42444116-42444135 | None:intergenic | 10.0% |
| !! | AAAATTGAGTAAAAAAAATA+AGG | + | chr4_1:42444116-42444135 | None:intergenic | 10.0% |
| !! | AATTGTTTACCTAAAAAATT+TGG | - | chr4_1:42444314-42444333 | Msa0548410:CDS | 15.0% |
| !! | AATTGTTTACCTAAAAAATT+TGG | - | chr4_1:42444314-42444333 | Msa0548410:CDS | 15.0% |
| !!! | TTTTTTGAATTCATAGAAAG+GGG | + | chr4_1:42443313-42443332 | None:intergenic | 20.0% |
| !!! | GTTTTTTGAATTCATAGAAA+GGG | + | chr4_1:42443314-42443333 | None:intergenic | 20.0% |
| !!! | TGTTTTTTGAATTCATAGAA+AGG | + | chr4_1:42443315-42443334 | None:intergenic | 20.0% |
| !! | TTATAGAGATTCTACATAAA+AGG | - | chr4_1:42443653-42443672 | Msa0548410:CDS | 20.0% |
| !! | ATGCTAAGTAAAAAAATGAA+GGG | + | chr4_1:42443696-42443715 | None:intergenic | 20.0% |
| !!! | GATACAATTCTAAAATAGAT+TGG | - | chr4_1:42443922-42443941 | Msa0548410:intron | 20.0% |
| !! | CTAAATTTGAAAAGAAGAAT+TGG | - | chr4_1:42443945-42443964 | Msa0548410:intron | 20.0% |
| !!! | ATTCAATGACCAAATTTTTT+AGG | + | chr4_1:42444326-42444345 | None:intergenic | 20.0% |
| !! | ATATACAAAGATGATGATAT+AGG | - | chr4_1:42444679-42444698 | Msa0548410:CDS | 20.0% |
| !!! | ATCAAGTTCTAAAGAAAATA+TGG | - | chr4_1:42444729-42444748 | Msa0548410:CDS | 20.0% |
| !! | ATTTCTGTTGTTGAATTAAA+GGG | + | chr4_1:42444862-42444881 | None:intergenic | 20.0% |
| !!! | TTTATCTATCATCATGTTTT+TGG | - | chr4_1:42444999-42445018 | Msa0548410:CDS | 20.0% |
| !! | TGAACTATGAAAATAGATAT+TGG | - | chr4_1:42445054-42445073 | Msa0548410:five_prime_UTR | 20.0% |
| !!! | TTTTTTGAATTCATAGAAAG+GGG | + | chr4_1:42443313-42443332 | None:intergenic | 20.0% |
| !!! | GTTTTTTGAATTCATAGAAA+GGG | + | chr4_1:42443314-42443333 | None:intergenic | 20.0% |
| !!! | TGTTTTTTGAATTCATAGAA+AGG | + | chr4_1:42443315-42443334 | None:intergenic | 20.0% |
| !! | TTATAGAGATTCTACATAAA+AGG | - | chr4_1:42443653-42443672 | Msa0548410:CDS | 20.0% |
| !! | ATGCTAAGTAAAAAAATGAA+GGG | + | chr4_1:42443696-42443715 | None:intergenic | 20.0% |
| !!! | GATACAATTCTAAAATAGAT+TGG | - | chr4_1:42443922-42443941 | Msa0548410:intron | 20.0% |
| !! | CTAAATTTGAAAAGAAGAAT+TGG | - | chr4_1:42443945-42443964 | Msa0548410:intron | 20.0% |
| !!! | ATTCAATGACCAAATTTTTT+AGG | + | chr4_1:42444326-42444345 | None:intergenic | 20.0% |
| !! | ATATACAAAGATGATGATAT+AGG | - | chr4_1:42444679-42444698 | Msa0548410:CDS | 20.0% |
| !!! | ATCAAGTTCTAAAGAAAATA+TGG | - | chr4_1:42444729-42444748 | Msa0548410:CDS | 20.0% |
| !! | ATTTCTGTTGTTGAATTAAA+GGG | + | chr4_1:42444862-42444881 | None:intergenic | 20.0% |
| !!! | TTTATCTATCATCATGTTTT+TGG | - | chr4_1:42444999-42445018 | Msa0548410:CDS | 20.0% |
| !! | TGAACTATGAAAATAGATAT+TGG | - | chr4_1:42445054-42445073 | Msa0548410:five_prime_UTR | 20.0% |
| ! | TGCTAAGTAAAAAAATGAAG+GGG | + | chr4_1:42443695-42443714 | None:intergenic | 25.0% |
| ! | CATGCTAAGTAAAAAAATGA+AGG | + | chr4_1:42443697-42443716 | None:intergenic | 25.0% |
| !!! | CTTCATTTTTTTACTTAGCA+TGG | - | chr4_1:42443695-42443714 | Msa0548410:CDS | 25.0% |
| !!! | ATTTCCAAGGTTTTAAATTG+CGG | - | chr4_1:42443723-42443742 | Msa0548410:CDS | 25.0% |
| ! | TGTTACTAAATGAATCATGA+TGG | - | chr4_1:42443889-42443908 | Msa0548410:CDS | 25.0% |
| ! | AATTTGAAAAGAAGAATTGG+AGG | - | chr4_1:42443948-42443967 | Msa0548410:intron | 25.0% |
| ! | ATTTGAAAAGAAGAATTGGA+GGG | - | chr4_1:42443949-42443968 | Msa0548410:intron | 25.0% |
| ! | TTCCAATATATTGATCAGAA+CGG | - | chr4_1:42444079-42444098 | Msa0548410:intron | 25.0% |
| ! | AAGATATTATGACAATTTGC+AGG | - | chr4_1:42444380-42444399 | Msa0548410:intron | 25.0% |
| ! | ATCATCATCTTTGTATATCA+TGG | + | chr4_1:42444677-42444696 | None:intergenic | 25.0% |
| ! | TTTCTGTTGTTGAATTAAAG+GGG | + | chr4_1:42444861-42444880 | None:intergenic | 25.0% |
| ! | CATTTCTGTTGTTGAATTAA+AGG | + | chr4_1:42444863-42444882 | None:intergenic | 25.0% |
| ! | TGCTAAGTAAAAAAATGAAG+GGG | + | chr4_1:42443695-42443714 | None:intergenic | 25.0% |
| ! | CATGCTAAGTAAAAAAATGA+AGG | + | chr4_1:42443697-42443716 | None:intergenic | 25.0% |
| !!! | CTTCATTTTTTTACTTAGCA+TGG | - | chr4_1:42443695-42443714 | Msa0548410:CDS | 25.0% |
| !!! | ATTTCCAAGGTTTTAAATTG+CGG | - | chr4_1:42443723-42443742 | Msa0548410:CDS | 25.0% |
| ! | TGTTACTAAATGAATCATGA+TGG | - | chr4_1:42443889-42443908 | Msa0548410:CDS | 25.0% |
| ! | AATTTGAAAAGAAGAATTGG+AGG | - | chr4_1:42443948-42443967 | Msa0548410:intron | 25.0% |
| ! | ATTTGAAAAGAAGAATTGGA+GGG | - | chr4_1:42443949-42443968 | Msa0548410:intron | 25.0% |
| ! | TTCCAATATATTGATCAGAA+CGG | - | chr4_1:42444079-42444098 | Msa0548410:intron | 25.0% |
| ! | AAGATATTATGACAATTTGC+AGG | - | chr4_1:42444380-42444399 | Msa0548410:intron | 25.0% |
| ! | ATCATCATCTTTGTATATCA+TGG | + | chr4_1:42444677-42444696 | None:intergenic | 25.0% |
| ! | TTTCTGTTGTTGAATTAAAG+GGG | + | chr4_1:42444861-42444880 | None:intergenic | 25.0% |
| ! | CATTTCTGTTGTTGAATTAA+AGG | + | chr4_1:42444863-42444882 | None:intergenic | 25.0% |
| !!! | CTCTTTTTTTCTATCCTTTG+AGG | - | chr4_1:42443231-42443250 | Msa0548410:three_prime_UTR | 30.0% |
| !!! | TTTTTTCTATCCTTTGAGGA+AGG | - | chr4_1:42443235-42443254 | Msa0548410:three_prime_UTR | 30.0% |
| ATGTTTATTTCCTTCCTCAA+AGG | + | chr4_1:42443248-42443267 | None:intergenic | 30.0% | |
| ATATCCAAAACTATAGCTCT+AGG | - | chr4_1:42443492-42443511 | Msa0548410:CDS | 30.0% | |
| ! | AAATCCTAGAGCTATAGTTT+TGG | + | chr4_1:42443499-42443518 | None:intergenic | 30.0% |
| ! | TCTTTGAAGAATGATAGAAG+AGG | - | chr4_1:42443543-42443562 | Msa0548410:CDS | 30.0% |
| ! | CTTTTGAGCTAGATGATTAT+AGG | - | chr4_1:42443626-42443645 | Msa0548410:CDS | 30.0% |
| GCTAAGTAAAAAAATGAAGG+GGG | + | chr4_1:42443694-42443713 | None:intergenic | 30.0% | |
| ! | GCAATTTAAAACCTTGGAAA+TGG | + | chr4_1:42443724-42443743 | None:intergenic | 30.0% |
| TAGTAACAAAGAAGTGATCA+CGG | + | chr4_1:42443877-42443896 | None:intergenic | 30.0% | |
| TCCAATATATTGATCAGAAC+GGG | - | chr4_1:42444080-42444099 | Msa0548410:intron | 30.0% | |
| !!! | TGTTTTAACCCTTCTTTACT+AGG | + | chr4_1:42444291-42444310 | None:intergenic | 30.0% |
| AGAGAGAGTAATGAAACTAT+TGG | - | chr4_1:42444435-42444454 | Msa0548410:intron | 30.0% | |
| GTAATGAAACTATTGGAAGA+AGG | - | chr4_1:42444442-42444461 | Msa0548410:intron | 30.0% | |
| AAGAAAGAAACCAATGTAGA+AGG | - | chr4_1:42444479-42444498 | Msa0548410:intron | 30.0% | |
| AATTCATCTTTCTCAACCTT+AGG | - | chr4_1:42444640-42444659 | Msa0548410:intron | 30.0% | |
| ! | CATGGTTTTCATATTACCTA+AGG | + | chr4_1:42444659-42444678 | None:intergenic | 30.0% |
| AAGAAAATATGGAACCTAGT+AGG | - | chr4_1:42444740-42444759 | Msa0548410:CDS | 30.0% | |
| AGAAAATATGGAACCTAGTA+GGG | - | chr4_1:42444741-42444760 | Msa0548410:CDS | 30.0% | |
| !!! | CTCTTTTTTTCTATCCTTTG+AGG | - | chr4_1:42443231-42443250 | Msa0548410:three_prime_UTR | 30.0% |
| !!! | TTTTTTCTATCCTTTGAGGA+AGG | - | chr4_1:42443235-42443254 | Msa0548410:three_prime_UTR | 30.0% |
| ATGTTTATTTCCTTCCTCAA+AGG | + | chr4_1:42443248-42443267 | None:intergenic | 30.0% | |
| ATATCCAAAACTATAGCTCT+AGG | - | chr4_1:42443492-42443511 | Msa0548410:CDS | 30.0% | |
| ! | AAATCCTAGAGCTATAGTTT+TGG | + | chr4_1:42443499-42443518 | None:intergenic | 30.0% |
| ! | TCTTTGAAGAATGATAGAAG+AGG | - | chr4_1:42443543-42443562 | Msa0548410:CDS | 30.0% |
| ! | CTTTTGAGCTAGATGATTAT+AGG | - | chr4_1:42443626-42443645 | Msa0548410:CDS | 30.0% |
| GCTAAGTAAAAAAATGAAGG+GGG | + | chr4_1:42443694-42443713 | None:intergenic | 30.0% | |
| ! | GCAATTTAAAACCTTGGAAA+TGG | + | chr4_1:42443724-42443743 | None:intergenic | 30.0% |
| TAGTAACAAAGAAGTGATCA+CGG | + | chr4_1:42443877-42443896 | None:intergenic | 30.0% | |
| TCCAATATATTGATCAGAAC+GGG | - | chr4_1:42444080-42444099 | Msa0548410:intron | 30.0% | |
| !!! | TGTTTTAACCCTTCTTTACT+AGG | + | chr4_1:42444291-42444310 | None:intergenic | 30.0% |
| AGAGAGAGTAATGAAACTAT+TGG | - | chr4_1:42444435-42444454 | Msa0548410:intron | 30.0% | |
| GTAATGAAACTATTGGAAGA+AGG | - | chr4_1:42444442-42444461 | Msa0548410:intron | 30.0% | |
| AAGAAAGAAACCAATGTAGA+AGG | - | chr4_1:42444479-42444498 | Msa0548410:intron | 30.0% | |
| AATTCATCTTTCTCAACCTT+AGG | - | chr4_1:42444640-42444659 | Msa0548410:intron | 30.0% | |
| ! | CATGGTTTTCATATTACCTA+AGG | + | chr4_1:42444659-42444678 | None:intergenic | 30.0% |
| AAGAAAATATGGAACCTAGT+AGG | - | chr4_1:42444740-42444759 | Msa0548410:CDS | 30.0% | |
| AGAAAATATGGAACCTAGTA+GGG | - | chr4_1:42444741-42444760 | Msa0548410:CDS | 30.0% | |
| ! | CAGTCTTGATTTTCTCTTTG+AGG | + | chr4_1:42443350-42443369 | None:intergenic | 35.0% |
| ATGATAGAAGAGGCAACTAA+TGG | - | chr4_1:42443553-42443572 | Msa0548410:CDS | 35.0% | |
| AACCCTCAGATCAATTTCAA+AGG | - | chr4_1:42443600-42443619 | Msa0548410:CDS | 35.0% | |
| !! | TGCCTTTGAAATTGATCTGA+GGG | + | chr4_1:42443605-42443624 | None:intergenic | 35.0% |
| TTGAGCTAGATGATTATAGG+AGG | - | chr4_1:42443629-42443648 | Msa0548410:CDS | 35.0% | |
| GCAATCAAATTCGACATATG+TGG | - | chr4_1:42443783-42443802 | Msa0548410:CDS | 35.0% | |
| ! | CATCGGAAACAATTTTGTCA+TGG | - | chr4_1:42443819-42443838 | Msa0548410:CDS | 35.0% |
| !!! | GTGATCACGGTTTTAAATGA+AGG | + | chr4_1:42443864-42443883 | None:intergenic | 35.0% |
| CACAATCAAGGAATTGTAAG+AGG | + | chr4_1:42443975-42443994 | None:intergenic | 35.0% | |
| TATATTGGAAACCTTTCAGC+TGG | + | chr4_1:42444069-42444088 | None:intergenic | 35.0% | |
| ACCCGTTCTGATCAATATAT+TGG | + | chr4_1:42444084-42444103 | None:intergenic | 35.0% | |
| ! | TCCTTTTCACCTAGTAAAGA+AGG | - | chr4_1:42444279-42444298 | Msa0548410:CDS | 35.0% |
| ! | CCTTTTCACCTAGTAAAGAA+GGG | - | chr4_1:42444280-42444299 | Msa0548410:CDS | 35.0% |
| ! | GAATTTCTTCCAGTTGATAC+TGG | - | chr4_1:42444342-42444361 | Msa0548410:CDS | 35.0% |
| TGACAATTTGCAGGTTCAAT+TGG | - | chr4_1:42444389-42444408 | Msa0548410:intron | 35.0% | |
| GACAATTTGCAGGTTCAATT+GGG | - | chr4_1:42444390-42444409 | Msa0548410:intron | 35.0% | |
| ACAATTTGCAGGTTCAATTG+GGG | - | chr4_1:42444391-42444410 | Msa0548410:intron | 35.0% | |
| CTGATTTCTTTCTCACAGTT+AGG | + | chr4_1:42444417-42444436 | None:intergenic | 35.0% | |
| ! | CTCTTGATAACCTTCTACAT+TGG | + | chr4_1:42444492-42444511 | None:intergenic | 35.0% |
| CAATGTAGAAGGTTATCAAG+AGG | - | chr4_1:42444490-42444509 | Msa0548410:intron | 35.0% | |
| !! | AGGTTATCAAGAGGTATTCA+AGG | - | chr4_1:42444499-42444518 | Msa0548410:intron | 35.0% |
| !! | TCAAGAGGTATTCAAGGTTT+CGG | - | chr4_1:42444505-42444524 | Msa0548410:intron | 35.0% |
| AAATCATTGCCAACCACATT+CGG | - | chr4_1:42444574-42444593 | Msa0548410:intron | 35.0% | |
| TGAATTACATCTACCGAATG+TGG | + | chr4_1:42444590-42444609 | None:intergenic | 35.0% | |
| !! | TCAGAATCACTTTTGGATTG+CGG | - | chr4_1:42444787-42444806 | Msa0548410:intron | 35.0% |
| CTAGAGATGGAATACTACAA+GGG | - | chr4_1:42444908-42444927 | Msa0548410:intron | 35.0% | |
| AAGAAACTGTGACCTTTGAA+GGG | + | chr4_1:42445033-42445052 | None:intergenic | 35.0% | |
| AAAGAAACTGTGACCTTTGA+AGG | + | chr4_1:42445034-42445053 | None:intergenic | 35.0% | |
| ! | CAGTCTTGATTTTCTCTTTG+AGG | + | chr4_1:42443350-42443369 | None:intergenic | 35.0% |
| ATGATAGAAGAGGCAACTAA+TGG | - | chr4_1:42443553-42443572 | Msa0548410:CDS | 35.0% | |
| AACCCTCAGATCAATTTCAA+AGG | - | chr4_1:42443600-42443619 | Msa0548410:CDS | 35.0% | |
| !! | TGCCTTTGAAATTGATCTGA+GGG | + | chr4_1:42443605-42443624 | None:intergenic | 35.0% |
| TTGAGCTAGATGATTATAGG+AGG | - | chr4_1:42443629-42443648 | Msa0548410:CDS | 35.0% | |
| GCAATCAAATTCGACATATG+TGG | - | chr4_1:42443783-42443802 | Msa0548410:CDS | 35.0% | |
| ! | CATCGGAAACAATTTTGTCA+TGG | - | chr4_1:42443819-42443838 | Msa0548410:CDS | 35.0% |
| !!! | GTGATCACGGTTTTAAATGA+AGG | + | chr4_1:42443864-42443883 | None:intergenic | 35.0% |
| CACAATCAAGGAATTGTAAG+AGG | + | chr4_1:42443975-42443994 | None:intergenic | 35.0% | |
| TATATTGGAAACCTTTCAGC+TGG | + | chr4_1:42444069-42444088 | None:intergenic | 35.0% | |
| ACCCGTTCTGATCAATATAT+TGG | + | chr4_1:42444084-42444103 | None:intergenic | 35.0% | |
| ! | TCCTTTTCACCTAGTAAAGA+AGG | - | chr4_1:42444279-42444298 | Msa0548410:CDS | 35.0% |
| ! | CCTTTTCACCTAGTAAAGAA+GGG | - | chr4_1:42444280-42444299 | Msa0548410:CDS | 35.0% |
| ! | GAATTTCTTCCAGTTGATAC+TGG | - | chr4_1:42444342-42444361 | Msa0548410:CDS | 35.0% |
| TGACAATTTGCAGGTTCAAT+TGG | - | chr4_1:42444389-42444408 | Msa0548410:intron | 35.0% | |
| GACAATTTGCAGGTTCAATT+GGG | - | chr4_1:42444390-42444409 | Msa0548410:intron | 35.0% | |
| ACAATTTGCAGGTTCAATTG+GGG | - | chr4_1:42444391-42444410 | Msa0548410:intron | 35.0% | |
| CTGATTTCTTTCTCACAGTT+AGG | + | chr4_1:42444417-42444436 | None:intergenic | 35.0% | |
| ! | CTCTTGATAACCTTCTACAT+TGG | + | chr4_1:42444492-42444511 | None:intergenic | 35.0% |
| CAATGTAGAAGGTTATCAAG+AGG | - | chr4_1:42444490-42444509 | Msa0548410:intron | 35.0% | |
| !! | AGGTTATCAAGAGGTATTCA+AGG | - | chr4_1:42444499-42444518 | Msa0548410:intron | 35.0% |
| !! | TCAAGAGGTATTCAAGGTTT+CGG | - | chr4_1:42444505-42444524 | Msa0548410:intron | 35.0% |
| AAATCATTGCCAACCACATT+CGG | - | chr4_1:42444574-42444593 | Msa0548410:intron | 35.0% | |
| TGAATTACATCTACCGAATG+TGG | + | chr4_1:42444590-42444609 | None:intergenic | 35.0% | |
| !! | TCAGAATCACTTTTGGATTG+CGG | - | chr4_1:42444787-42444806 | Msa0548410:intron | 35.0% |
| CTAGAGATGGAATACTACAA+GGG | - | chr4_1:42444908-42444927 | Msa0548410:intron | 35.0% | |
| AAGAAACTGTGACCTTTGAA+GGG | + | chr4_1:42445033-42445052 | None:intergenic | 35.0% | |
| AAAGAAACTGTGACCTTTGA+AGG | + | chr4_1:42445034-42445053 | None:intergenic | 35.0% | |
| AGGCAACTAATGGAAATCCA+TGG | - | chr4_1:42443563-42443582 | Msa0548410:CDS | 40.0% | |
| GGCAACTAATGGAAATCCAT+GGG | - | chr4_1:42443564-42443583 | Msa0548410:CDS | 40.0% | |
| !! | CTGCCTTTGAAATTGATCTG+AGG | + | chr4_1:42443606-42443625 | None:intergenic | 40.0% |
| GTGGTCTCAATCAACAACAT+CGG | - | chr4_1:42443802-42443821 | Msa0548410:CDS | 40.0% | |
| CAAATGCTCAAGCACAATCA+AGG | + | chr4_1:42443987-42444006 | None:intergenic | 40.0% | |
| !! | CTTGAGCATTTGTTGACTCA+TGG | - | chr4_1:42443995-42444014 | Msa0548410:intron | 40.0% |
| AATTCCTCTGCTACACTTTC+TGG | + | chr4_1:42444022-42444041 | None:intergenic | 40.0% | |
| GATGTTATTGACCAGCTGAA+AGG | - | chr4_1:42444055-42444074 | Msa0548410:intron | 40.0% | |
| GTGAAAAGGACCTGATAATC+TGG | + | chr4_1:42444269-42444288 | None:intergenic | 40.0% | |
| CCCTTCTTTACTAGGTGAAA+AGG | + | chr4_1:42444283-42444302 | None:intergenic | 40.0% | |
| GGAAGAAGGAAATCTTCTCA+AGG | - | chr4_1:42444456-42444475 | Msa0548410:intron | 40.0% | |
| CAATGATTTCTCGCGAAGAA+TGG | + | chr4_1:42444563-42444582 | None:intergenic | 40.0% | |
| TTACATCTACCGAATGTGGT+TGG | + | chr4_1:42444586-42444605 | None:intergenic | 40.0% | |
| CTCAAACAACTACGAAGATC+AGG | - | chr4_1:42444612-42444631 | Msa0548410:intron | 40.0% | |
| AAATATGGAACCTAGTAGGG+AGG | - | chr4_1:42444744-42444763 | Msa0548410:CDS | 40.0% | |
| ! | TGGAGAGTCAGAATCACTTT+TGG | - | chr4_1:42444780-42444799 | Msa0548410:intron | 40.0% |
| AAGACGATTCTTCTAGGCTT+GGG | - | chr4_1:42444812-42444831 | Msa0548410:intron | 40.0% | |
| GCTAGAGATGGAATACTACA+AGG | - | chr4_1:42444907-42444926 | Msa0548410:intron | 40.0% | |
| AGGCAACTAATGGAAATCCA+TGG | - | chr4_1:42443563-42443582 | Msa0548410:CDS | 40.0% | |
| GGCAACTAATGGAAATCCAT+GGG | - | chr4_1:42443564-42443583 | Msa0548410:CDS | 40.0% | |
| !! | CTGCCTTTGAAATTGATCTG+AGG | + | chr4_1:42443606-42443625 | None:intergenic | 40.0% |
| GTGGTCTCAATCAACAACAT+CGG | - | chr4_1:42443802-42443821 | Msa0548410:CDS | 40.0% | |
| CAAATGCTCAAGCACAATCA+AGG | + | chr4_1:42443987-42444006 | None:intergenic | 40.0% | |
| !! | CTTGAGCATTTGTTGACTCA+TGG | - | chr4_1:42443995-42444014 | Msa0548410:intron | 40.0% |
| AATTCCTCTGCTACACTTTC+TGG | + | chr4_1:42444022-42444041 | None:intergenic | 40.0% | |
| GATGTTATTGACCAGCTGAA+AGG | - | chr4_1:42444055-42444074 | Msa0548410:intron | 40.0% | |
| GTGAAAAGGACCTGATAATC+TGG | + | chr4_1:42444269-42444288 | None:intergenic | 40.0% | |
| CCCTTCTTTACTAGGTGAAA+AGG | + | chr4_1:42444283-42444302 | None:intergenic | 40.0% | |
| GGAAGAAGGAAATCTTCTCA+AGG | - | chr4_1:42444456-42444475 | Msa0548410:intron | 40.0% | |
| CAATGATTTCTCGCGAAGAA+TGG | + | chr4_1:42444563-42444582 | None:intergenic | 40.0% | |
| TTACATCTACCGAATGTGGT+TGG | + | chr4_1:42444586-42444605 | None:intergenic | 40.0% | |
| CTCAAACAACTACGAAGATC+AGG | - | chr4_1:42444612-42444631 | Msa0548410:intron | 40.0% | |
| AAATATGGAACCTAGTAGGG+AGG | - | chr4_1:42444744-42444763 | Msa0548410:CDS | 40.0% | |
| ! | TGGAGAGTCAGAATCACTTT+TGG | - | chr4_1:42444780-42444799 | Msa0548410:intron | 40.0% |
| AAGACGATTCTTCTAGGCTT+GGG | - | chr4_1:42444812-42444831 | Msa0548410:intron | 40.0% | |
| GCTAGAGATGGAATACTACA+AGG | - | chr4_1:42444907-42444926 | Msa0548410:intron | 40.0% | |
| !!! | AGGGGTGCTCATTTTGCTAT+TGG | + | chr4_1:42443295-42443314 | None:intergenic | 45.0% |
| TAACAAGCTCACAGTTCTGC+AGG | + | chr4_1:42443399-42443418 | None:intergenic | 45.0% | |
| GATCTGAGGGTTACAGTAGT+TGG | + | chr4_1:42443592-42443611 | None:intergenic | 45.0% | |
| TAGCATGGTCACCATTTCCA+AGG | - | chr4_1:42443710-42443729 | Msa0548410:CDS | 45.0% | |
| ! | GCGACCGCAATTTAAAACCT+TGG | + | chr4_1:42443730-42443749 | None:intergenic | 45.0% |
| CGAGCAAACTCCAGATTATC+AGG | - | chr4_1:42444256-42444275 | Msa0548410:CDS | 45.0% | |
| GAAGACGATTCTTCTAGGCT+TGG | - | chr4_1:42444811-42444830 | Msa0548410:intron | 45.0% | |
| TCCTTGCTTTCTGCTAGAGA+TGG | - | chr4_1:42444895-42444914 | Msa0548410:intron | 45.0% | |
| TCCATCTCTAGCAGAAAGCA+AGG | + | chr4_1:42444899-42444918 | None:intergenic | 45.0% | |
| TTGGTAGAACCTCCCTTCAA+AGG | - | chr4_1:42445018-42445037 | Msa0548410:exon | 45.0% | |
| ! | AAACTGTGACCTTTGAAGGG+AGG | + | chr4_1:42445030-42445049 | None:intergenic | 45.0% |
| !!! | AGGGGTGCTCATTTTGCTAT+TGG | + | chr4_1:42443295-42443314 | None:intergenic | 45.0% |
| TAACAAGCTCACAGTTCTGC+AGG | + | chr4_1:42443399-42443418 | None:intergenic | 45.0% | |
| GATCTGAGGGTTACAGTAGT+TGG | + | chr4_1:42443592-42443611 | None:intergenic | 45.0% | |
| TAGCATGGTCACCATTTCCA+AGG | - | chr4_1:42443710-42443729 | Msa0548410:CDS | 45.0% | |
| ! | GCGACCGCAATTTAAAACCT+TGG | + | chr4_1:42443730-42443749 | None:intergenic | 45.0% |
| CGAGCAAACTCCAGATTATC+AGG | - | chr4_1:42444256-42444275 | Msa0548410:CDS | 45.0% | |
| GAAGACGATTCTTCTAGGCT+TGG | - | chr4_1:42444811-42444830 | Msa0548410:intron | 45.0% | |
| TCCTTGCTTTCTGCTAGAGA+TGG | - | chr4_1:42444895-42444914 | Msa0548410:intron | 45.0% | |
| TCCATCTCTAGCAGAAAGCA+AGG | + | chr4_1:42444899-42444918 | None:intergenic | 45.0% | |
| TTGGTAGAACCTCCCTTCAA+AGG | - | chr4_1:42445018-42445037 | Msa0548410:exon | 45.0% | |
| ! | AAACTGTGACCTTTGAAGGG+AGG | + | chr4_1:42445030-42445049 | None:intergenic | 45.0% |
| ! | GTTACAGTAGTTGGTGCCCA+TGG | + | chr4_1:42443583-42443602 | None:intergenic | 50.0% |
| ! | TGGACCAGAAAGTGTAGCAG+AGG | - | chr4_1:42444015-42444034 | Msa0548410:intron | 50.0% |
| CTTGCAGCACCAGTATCAAC+TGG | + | chr4_1:42444354-42444373 | None:intergenic | 50.0% | |
| ! | TCGCGAAGAATGGCTTGTGT+TGG | + | chr4_1:42444553-42444572 | None:intergenic | 50.0% |
| AAGTTCCACACCTCCCTACT+AGG | + | chr4_1:42444757-42444776 | None:intergenic | 50.0% | |
| ! | TAGTAGGGAGGTGTGGAACT+TGG | - | chr4_1:42444756-42444775 | Msa0548410:CDS | 50.0% |
| GCGGAGAAGACGATTCTTCT+AGG | - | chr4_1:42444806-42444825 | Msa0548410:intron | 50.0% | |
| ACGATTCTTCTAGGCTTGGG+AGG | - | chr4_1:42444815-42444834 | Msa0548410:intron | 50.0% | |
| ! | GTTACAGTAGTTGGTGCCCA+TGG | + | chr4_1:42443583-42443602 | None:intergenic | 50.0% |
| ! | TGGACCAGAAAGTGTAGCAG+AGG | - | chr4_1:42444015-42444034 | Msa0548410:intron | 50.0% |
| CTTGCAGCACCAGTATCAAC+TGG | + | chr4_1:42444354-42444373 | None:intergenic | 50.0% | |
| ! | TCGCGAAGAATGGCTTGTGT+TGG | + | chr4_1:42444553-42444572 | None:intergenic | 50.0% |
| AAGTTCCACACCTCCCTACT+AGG | + | chr4_1:42444757-42444776 | None:intergenic | 50.0% | |
| ! | TAGTAGGGAGGTGTGGAACT+TGG | - | chr4_1:42444756-42444775 | Msa0548410:CDS | 50.0% |
| GCGGAGAAGACGATTCTTCT+AGG | - | chr4_1:42444806-42444825 | Msa0548410:intron | 50.0% | |
| ACGATTCTTCTAGGCTTGGG+AGG | - | chr4_1:42444815-42444834 | Msa0548410:intron | 50.0% | |
| AAGGTCTGCGAGCGCAATCT+AGG | + | chr4_1:42443845-42443864 | None:intergenic | 55.0% | |
| TGGAACCTAGTAGGGAGGTG+TGG | - | chr4_1:42444749-42444768 | Msa0548410:CDS | 55.0% | |
| ! | AGGGAGGTGTGGAACTTGGA+TGG | - | chr4_1:42444760-42444779 | Msa0548410:intron | 55.0% |
| AAGGTCTGCGAGCGCAATCT+AGG | + | chr4_1:42443845-42443864 | None:intergenic | 55.0% | |
| TGGAACCTAGTAGGGAGGTG+TGG | - | chr4_1:42444749-42444768 | Msa0548410:CDS | 55.0% | |
| ! | AGGGAGGTGTGGAACTTGGA+TGG | - | chr4_1:42444760-42444779 | Msa0548410:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 42443223 | 42445105 | 42443223 | ID=Msa0548410;Name=Msa0548410 |
| chr4_1 | mRNA | 42443223 | 42445105 | 42443223 | ID=Msa0548410-mRNA-1;Parent=Msa0548410;Name=Msa0548410-mRNA-1;_AED=0.10;_eAED=0.10;_QI=80|1|1|1|1|1|4|169|307 |
| chr4_1 | exon | 42443223 | 42443926 | 42443223 | ID=Msa0548410-mRNA-1:exon:10929;Parent=Msa0548410-mRNA-1 |
| chr4_1 | exon | 42444227 | 42444388 | 42444227 | ID=Msa0548410-mRNA-1:exon:10928;Parent=Msa0548410-mRNA-1 |
| chr4_1 | exon | 42444654 | 42444776 | 42444654 | ID=Msa0548410-mRNA-1:exon:10927;Parent=Msa0548410-mRNA-1 |
| chr4_1 | exon | 42444922 | 42445105 | 42444922 | ID=Msa0548410-mRNA-1:exon:10926;Parent=Msa0548410-mRNA-1 |
| chr4_1 | five_prime_UTR | 42445026 | 42445105 | 42445026 | ID=Msa0548410-mRNA-1:five_prime_utr;Parent=Msa0548410-mRNA-1 |
| chr4_1 | CDS | 42444922 | 42445025 | 42444922 | ID=Msa0548410-mRNA-1:cds;Parent=Msa0548410-mRNA-1 |
| chr4_1 | CDS | 42444654 | 42444776 | 42444654 | ID=Msa0548410-mRNA-1:cds;Parent=Msa0548410-mRNA-1 |
| chr4_1 | CDS | 42444227 | 42444388 | 42444227 | ID=Msa0548410-mRNA-1:cds;Parent=Msa0548410-mRNA-1 |
| chr4_1 | CDS | 42443392 | 42443926 | 42443392 | ID=Msa0548410-mRNA-1:cds;Parent=Msa0548410-mRNA-1 |
| chr4_1 | three_prime_UTR | 42443223 | 42443391 | 42443223 | ID=Msa0548410-mRNA-1:three_prime_utr;Parent=Msa0548410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
