AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0562430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0562430 MtrunA17_Chr8g0375701 96.056 355 14 0 1 355 1 355 0.0 706
Msa0562430 MtrunA17_Chr2g0314401 53.016 315 145 2 44 355 40 354 5.60e-121 353
Msa0562430 MtrunA17_Chr8g0375671 47.443 352 179 3 9 355 7 357 4.05e-120 351
Msa0562430 MtrunA17_Chr5g0420941 49.080 326 164 2 31 355 22 346 9.97e-118 344
Msa0562430 MtrunA17_Chr5g0423191 47.093 344 180 2 13 355 6 348 2.09e-117 343
Msa0562430 MtrunA17_Chr5g0421041 47.384 344 177 3 13 355 6 346 1.02e-115 339
Msa0562430 MtrunA17_Chr5g0423251 47.181 337 176 2 20 355 13 348 5.72e-115 337
Msa0562430 MtrunA17_Chr5g0421091 48.012 327 167 3 31 355 22 347 5.97e-115 337
Msa0562430 MtrunA17_Chr8g0365241 45.217 345 186 3 13 355 16 359 1.21e-114 337
Msa0562430 MtrunA17_Chr5g0420901 48.160 326 167 2 31 355 23 347 3.84e-114 335
Msa0562430 MtrunA17_Chr2g0314381 50.610 328 158 3 31 355 54 380 1.46e-112 332
Msa0562430 MtrunA17_Chr5g0420981 45.266 338 183 2 20 355 18 355 2.16e-112 331
Msa0562430 MtrunA17_Chr2g0314391 50.305 328 159 3 31 355 47 373 2.60e-112 332
Msa0562430 MtrunA17_Chr5g0423211 48.328 329 164 4 31 355 24 350 2.80e-112 331
Msa0562430 MtrunA17_Chr5g0420951 42.857 357 200 3 1 355 1 355 1.55e-111 329
Msa0562430 MtrunA17_Chr5g0423221 44.379 338 185 3 20 355 37 373 1.93e-109 324
Msa0562430 MtrunA17_Chr5g0421101 44.092 347 192 2 10 355 3 348 6.43e-109 322
Msa0562430 MtrunA17_Chr5g0423201 44.540 348 190 3 10 355 3 349 1.66e-107 318
Msa0562430 MtrunA17_Chr5g0421011 44.767 344 188 2 13 355 6 348 2.16e-107 318
Msa0562430 MtrunA17_Chr8g0375601 44.160 351 190 3 11 355 2 352 7.35e-107 317
Msa0562430 MtrunA17_Chr8g0375571 45.455 330 174 3 31 355 22 350 5.13e-105 312
Msa0562430 MtrunA17_Chr8g0375681 52.768 271 127 1 86 355 15 285 5.62e-103 305
Msa0562430 MtrunA17_Chr1g0162191 45.031 322 172 4 31 348 23 343 3.91e-96 290
Msa0562430 MtrunA17_Chr5g0420721 51.822 247 118 1 110 355 4 250 9.64e-88 265
Msa0562430 MtrunA17_Chr7g0239821 38.576 337 206 1 20 355 29 365 1.17e-86 266
Msa0562430 MtrunA17_Chr2g0314371 45.847 301 135 5 31 306 29 326 5.28e-85 260
Msa0562430 MtrunA17_Chr7g0239101 38.000 350 215 2 7 355 8 356 2.02e-83 257
Msa0562430 MtrunA17_Chr7g0239121 37.278 338 210 2 20 355 16 353 2.05e-80 249
Msa0562430 MtrunA17_Chr2g0296371 39.144 327 191 4 31 351 28 352 3.24e-80 249
Msa0562430 MtrunA17_Chr7g0239111 36.000 350 222 2 7 355 8 356 3.22e-78 244
Msa0562430 MtrunA17_Chr3g0087031 39.067 343 202 5 7 345 12 351 4.16e-78 243
Msa0562430 MtrunA17_Chr7g0242551 38.806 335 193 4 31 353 26 360 4.71e-77 241
Msa0562430 MtrunA17_Chr4g0006371 36.628 344 197 4 31 353 25 368 1.92e-73 232
Msa0562430 MtrunA17_Chr5g0437181 35.542 332 207 3 30 354 24 355 2.50e-72 229
Msa0562430 MtrunA17_Chr3g0145171 40.193 311 168 5 55 355 52 354 4.17e-71 225
Msa0562430 MtrunA17_Chr3g0113641 35.843 332 204 4 31 354 26 356 4.97e-70 223
Msa0562430 MtrunA17_Chr7g0232161 41.392 273 157 3 20 290 25 296 1.12e-69 221
Msa0562430 MtrunA17_Chr7g0239091 34.320 338 209 4 20 355 125 451 5.41e-69 223
Msa0562430 MtrunA17_Chr8g0370711 39.016 305 180 4 55 355 52 354 3.13e-67 215
Msa0562430 MtrunA17_Chr7g0239071 38.351 279 170 2 78 355 24 301 4.33e-64 206
Msa0562430 MtrunA17_Chr8g0370721 36.721 305 187 4 55 355 52 354 1.06e-61 201
Msa0562430 MtrunA17_Chr3g0128001 34.568 324 204 6 31 351 15 333 1.71e-61 200
Msa0562430 MtrunA17_Chr4g0064781 37.049 305 182 5 55 355 50 348 4.62e-60 197
Msa0562430 MtrunA17_Chr5g0424201 37.097 310 187 5 31 335 20 326 9.87e-60 195
Msa0562430 MtrunA17_Chr3g0109041 33.333 333 209 6 31 353 21 350 2.54e-59 195
Msa0562430 MtrunA17_Chr2g0311921 34.195 348 203 6 23 355 22 358 1.85e-58 193
Msa0562430 MtrunA17_Chr8g0336781 33.242 364 203 11 11 355 58 400 1.04e-55 187
Msa0562430 MtrunA17_Chr5g0424211 35.314 303 184 7 31 325 18 316 1.50e-55 184
Msa0562430 MtrunA17_Chr2g0311831 32.869 359 212 8 11 355 28 371 9.39e-55 184
Msa0562430 MtrunA17_Chr4g0045451 34.718 337 165 10 30 342 25 330 2.67e-54 182
Msa0562430 MtrunA17_Chr7g0265221 33.618 351 199 8 31 355 38 380 3.11e-54 182
Msa0562430 MtrunA17_Chr1g0179801 34.561 353 211 10 18 355 26 373 1.05e-53 181
Msa0562430 MtrunA17_Chr6g0472861 33.889 360 207 12 10 350 21 368 1.52e-53 181
Msa0562430 MtrunA17_Chr5g0420881 53.472 144 67 0 212 355 1 144 2.28e-53 173
Msa0562430 MtrunA17_Chr8g0336851 31.405 363 210 10 11 355 23 364 3.72e-53 179
Msa0562430 MtrunA17_Chr2g0311761 32.312 359 215 6 11 355 28 372 4.21e-53 179
Msa0562430 MtrunA17_Chr8g0336861 33.426 359 210 11 11 355 23 366 5.00e-53 179
Msa0562430 MtrunA17_Chr8g0345831 32.012 328 218 5 31 355 18 343 5.65e-53 178
Msa0562430 MtrunA17_Chr8g0348081 31.680 363 209 10 11 355 23 364 7.83e-53 178
Msa0562430 MtrunA17_Chr8g0336761 31.653 357 217 9 11 355 23 364 8.26e-53 178
Msa0562430 MtrunA17_Chr5g0426891 34.268 321 186 8 49 355 33 342 8.33e-53 177
Msa0562430 MtrunA17_Chr3g0145181 37.313 268 157 3 70 330 68 331 1.11e-52 177
Msa0562430 MtrunA17_Chr1g0162361 32.399 321 193 9 52 355 24 337 1.27e-52 177
Msa0562430 MtrunA17_Chr3g0125201 34.694 294 173 5 54 340 2 283 1.76e-52 176
Msa0562430 MtrunA17_Chr3g0114861 35.357 280 175 4 68 342 50 328 1.90e-52 176
Msa0562430 MtrunA17_Chr8g0336751 30.518 367 226 8 3 355 46 397 4.65e-52 177
Msa0562430 MtrunA17_Chr4g0045441 34.915 295 169 8 76 355 54 340 1.34e-51 175
Msa0562430 MtrunA17_Chr4g0045471 31.778 343 201 11 38 355 12 346 1.43e-51 175
Msa0562430 MtrunA17_Chr1g0187821 31.148 366 228 10 3 355 16 370 4.29e-51 174
Msa0562430 MtrunA17_Chr1g0162351 30.699 329 197 9 53 355 67 390 4.80e-51 174
Msa0562430 MtrunA17_Chr5g0398291 35.463 313 184 8 31 327 19 329 5.41e-51 173
Msa0562430 MtrunA17_Chr1g0162321 30.699 329 197 9 53 355 67 390 1.16e-50 173
Msa0562430 MtrunA17_Chr1g0187831 29.290 338 218 8 31 354 43 373 1.85e-50 173
Msa0562430 MtrunA17_Chr4g0055591 31.148 366 227 10 1 355 10 361 7.05e-50 171
Msa0562430 MtrunA17_Chr2g0311691 32.861 353 205 9 4 338 15 353 1.70e-49 170
Msa0562430 MtrunA17_Chr1g0187811 29.738 343 216 7 31 355 158 493 3.12e-49 172
Msa0562430 MtrunA17_Chr4g0050031 33.232 328 203 8 38 355 45 366 3.38e-49 169
Msa0562430 MtrunA17_Chr8g0354261 31.653 357 222 8 11 355 28 374 5.50e-49 169
Msa0562430 MtrunA17_Chr3g0145201 37.313 268 157 3 70 330 703 966 7.37e-49 176
Msa0562430 MtrunA17_Chr7g0266651 29.775 356 227 9 11 355 19 362 7.59e-49 168
Msa0562430 MtrunA17_Chr8g0336631 31.285 358 218 9 11 355 23 365 8.45e-49 168
Msa0562430 MtrunA17_Chr2g0311701 31.781 365 213 9 4 348 21 369 8.75e-49 168
Msa0562430 MtrunA17_Chr5g0412651 32.188 320 204 6 32 342 17 332 1.10e-48 167
Msa0562430 MtrunA17_Chr7g0265351 35.669 314 178 11 53 355 37 337 1.16e-48 167
Msa0562430 MtrunA17_Chr2g0332191 34.899 298 173 10 55 339 52 341 1.27e-48 167
Msa0562430 MtrunA17_Chr2g0311861 31.339 351 208 9 11 355 24 347 1.65e-48 166
Msa0562430 MtrunA17_Chr1g0184121 33.003 303 181 9 53 343 35 327 4.55e-48 165
Msa0562430 MtrunA17_Chr4g0045411 29.503 322 203 8 53 355 28 344 5.85e-48 165
Msa0562430 MtrunA17_Chr8g0354241 30.812 357 225 8 11 355 28 374 6.08e-48 166
Msa0562430 MtrunA17_Chr6g0455481 33.648 318 198 7 31 342 19 329 9.80e-48 164
Msa0562430 MtrunA17_Chr2g0311681 31.429 350 214 8 4 338 15 353 5.55e-47 163
Msa0562430 MtrunA17_Chr1g0184111 31.803 305 186 9 53 345 35 329 5.94e-47 162
Msa0562430 MtrunA17_Chr7g0235951 28.689 366 234 8 4 355 21 373 7.35e-47 163
Msa0562430 MtrunA17_Chr3g0093761 36.039 308 184 9 53 355 54 353 9.18e-47 162
Msa0562430 MtrunA17_Chr2g0289341 30.164 305 194 6 52 347 1 295 2.03e-46 160
Msa0562430 MtrunA17_Chr1g0184161 31.741 293 193 6 54 342 37 326 2.16e-46 161
Msa0562430 MtrunA17_Chr8g0351101 33.654 312 184 7 31 327 33 336 3.27e-46 161
Msa0562430 MtrunA17_Chr2g0311711 31.476 359 211 10 4 344 19 360 3.29e-46 161
Msa0562430 MtrunA17_Chr3g0130391 30.938 320 205 5 13 320 27 342 6.10e-46 160
Msa0562430 MtrunA17_Chr4g0066121 33.237 346 193 14 11 338 23 348 7.58e-46 160
Msa0562430 MtrunA17_Chr3g0126741 32.588 313 189 9 54 354 58 360 1.18e-45 159
Msa0562430 MtrunA17_Chr4g0045431 31.594 345 193 10 30 355 25 345 1.62e-45 159
Msa0562430 MtrunA17_Chr3g0093751 35.873 315 176 11 53 355 54 354 1.72e-45 159
Msa0562430 MtrunA17_Chr7g0250511 27.933 358 242 8 5 355 3 351 1.73e-45 159
Msa0562430 MtrunA17_Chr7g0220011 33.121 314 177 6 53 350 37 333 3.21e-45 157
Msa0562430 MtrunA17_Chr3g0093741 34.076 314 183 10 53 355 54 354 3.27e-45 158
Msa0562430 MtrunA17_Chr2g0311741 32.508 323 192 10 46 355 18 327 4.27e-45 157
Msa0562430 MtrunA17_Chr7g0225881 30.495 364 218 10 11 355 23 370 5.51e-45 158
Msa0562430 MtrunA17_Chr1g0184101 32.831 332 201 10 27 350 15 332 7.63e-45 157
Msa0562430 MtrunA17_Chr3g0125421 33.841 328 190 10 31 339 16 335 3.14e-44 155
Msa0562430 MtrunA17_Chr1g0161041 31.395 344 220 8 11 348 55 388 3.17e-44 156
Msa0562430 MtrunA17_Chr5g0412671 30.921 304 201 4 47 342 30 332 3.26e-44 155
Msa0562430 MtrunA17_Chr8g0371931 31.464 321 206 8 28 337 13 330 3.85e-44 155
Msa0562430 MtrunA17_Chr1g0167911 30.435 345 223 8 11 348 15 349 4.00e-44 155
Msa0562430 MtrunA17_Chr1g0204181 30.267 337 215 7 19 339 26 358 4.46e-44 155
Msa0562430 MtrunA17_Chr5g0405411 32.063 315 196 9 35 336 20 329 9.69e-44 154
Msa0562430 MtrunA17_Chr8g0375641 45.732 164 83 3 9 167 7 169 9.93e-44 149
Msa0562430 MtrunA17_Chr5g0412681 29.568 301 201 5 47 342 25 319 1.03e-43 154
Msa0562430 MtrunA17_Chr3g0102041 31.988 322 205 8 37 354 27 338 1.23e-43 154
Msa0562430 MtrunA17_Chr5g0439011 30.742 283 184 4 71 347 22 298 1.34e-43 153
Msa0562430 MtrunA17_Chr3g0121141 28.239 301 203 6 52 347 1 293 1.38e-43 152
Msa0562430 MtrunA17_Chr1g0184151 30.375 293 197 6 54 342 37 326 2.07e-43 153
Msa0562430 MtrunA17_Chr1g0167951 31.356 354 221 9 11 355 15 355 4.28e-43 152
Msa0562430 MtrunA17_Chr4g0045461 36.299 281 160 6 76 342 54 329 6.15e-43 152
Msa0562430 MtrunA17_Chr2g0319491 31.271 291 180 6 53 337 31 307 1.12e-42 150
Msa0562430 MtrunA17_Chr7g0220001 30.530 321 203 9 31 342 18 327 1.16e-42 151
Msa0562430 MtrunA17_Chr6g0474391 30.564 337 214 8 19 339 31 363 1.90e-42 151
Msa0562430 MtrunA17_Chr2g0311631 30.220 364 220 12 9 355 15 361 1.95e-42 151
Msa0562430 MtrunA17_Chr1g0167961 30.508 354 226 8 11 355 30 372 3.45e-42 150
Msa0562430 MtrunA17_Chr8g0375661 43.312 157 83 3 16 167 14 169 3.71e-42 144
Msa0562430 MtrunA17_Chr8g0371921 32.234 273 177 4 72 337 59 330 3.82e-42 150
Msa0562430 MtrunA17_Chr1g0191201 31.392 309 195 6 26 322 28 331 1.05e-41 149
Msa0562430 MtrunA17_Chr6g0488511 34.520 281 162 7 54 323 2 271 1.20e-41 147
Msa0562430 MtrunA17_Chr8g0364471 27.762 353 232 8 11 351 28 369 3.43e-41 148
Msa0562430 MtrunA17_Chr4g0066991 29.904 311 186 6 54 355 66 353 5.27e-41 147
Msa0562430 MtrunA17_Chr7g0236011 29.041 365 234 10 4 355 21 373 7.41e-41 147
Msa0562430 MtrunA17_Chr1g0161111 30.946 349 225 9 11 352 91 430 3.38e-40 147
Msa0562430 MtrunA17_Chr8g0335411 29.032 372 225 12 4 355 21 373 5.75e-40 145
Msa0562430 MtrunA17_Chr1g0161081 30.029 343 226 8 11 348 32 365 1.35e-39 144
Msa0562430 MtrunA17_Chr7g0247991 30.081 369 225 10 4 355 21 373 3.89e-39 142
Msa0562430 MtrunA17_Chr1g0184241 27.701 361 239 8 3 355 21 367 2.69e-38 140
Msa0562430 MtrunA17_Chr2g0285931 29.545 308 192 8 52 344 25 322 2.40e-37 137
Msa0562430 MtrunA17_Chr1g0148771 31.000 300 191 9 55 350 63 350 2.69e-36 134
Msa0562430 MtrunA17_Chr1g0167931 27.920 351 200 9 11 355 15 318 4.74e-36 133
Msa0562430 MtrunA17_Chr7g0235981 32.246 276 171 7 89 355 59 327 3.39e-35 131
Msa0562430 MtrunA17_Chr3g0114871 32.692 260 167 5 31 285 18 274 3.80e-35 129
Msa0562430 MtrunA17_Chr3g0105281 31.907 257 156 6 55 303 34 279 1.26e-34 129
Msa0562430 MtrunA17_Chr1g0170631 31.771 192 126 3 167 355 3 192 1.46e-34 125
Msa0562430 MtrunA17_Chr8g0384461 26.377 345 236 6 6 338 1 339 3.02e-34 129
Msa0562430 MtrunA17_Chr5g0420891 43.478 138 76 2 31 167 23 159 5.61e-34 123
Msa0562430 MtrunA17_Chr4g0068891 28.614 332 204 13 37 354 7 319 1.05e-33 127
Msa0562430 MtrunA17_Chr1g0194321 28.395 324 198 12 55 355 20 332 1.39e-32 124
Msa0562430 MtrunA17_Chr8g0358941 29.054 296 187 8 77 354 44 334 9.98e-32 122
Msa0562430 MtrunA17_Chr8g0336801 38.621 145 85 2 214 355 13 156 2.60e-31 115
Msa0562430 MtrunA17_Chr4g0064771 37.952 166 98 2 168 330 27 190 8.21e-30 113
Msa0562430 MtrunA17_Chr8g0384481 30.545 275 171 7 77 337 84 352 1.39e-29 117
Msa0562430 MtrunA17_Chr2g0313111 27.052 329 213 9 35 353 14 325 4.76e-29 114
Msa0562430 MtrunA17_Chr4g0011311 29.537 281 179 10 3 276 20 288 1.01e-28 113
Msa0562430 MtrunA17_Chr4g0053251 29.373 303 174 9 52 323 5 298 3.91e-28 112
Msa0562430 MtrunA17_Chr8g0375581 53.488 86 40 0 188 273 1 86 7.38e-28 104
Msa0562430 MtrunA17_Chr4g0052251 26.502 283 193 7 74 344 43 322 8.65e-28 111
Msa0562430 MtrunA17_Chr3g0126761 40.559 143 83 2 212 354 91 231 1.59e-27 108
Msa0562430 MtrunA17_Chr4g0055911 29.766 299 186 11 54 335 8 299 4.41e-27 108
Msa0562430 MtrunA17_Chr7g0256741 30.351 313 200 7 53 355 8 312 4.70e-27 108
Msa0562430 MtrunA17_Chr4g0075471 34.752 141 90 1 205 343 22 162 5.80e-27 104
Msa0562430 MtrunA17_Chr8g0336871 33.520 179 109 3 180 355 3 174 2.09e-26 103
Msa0562430 MtrunA17_Chr3g0092531 27.675 271 184 8 71 337 27 289 4.84e-25 103
Msa0562430 MtrunA17_Chr5g0394071 32.738 168 106 2 170 337 5 165 5.42e-25 100
Msa0562430 MtrunA17_Chr7g0233661 39.844 128 70 2 210 337 19 139 4.16e-24 97.1
Msa0562430 MtrunA17_Chr6g0486831 29.452 292 179 9 68 335 32 320 6.07e-24 100
Msa0562430 MtrunA17_Chr8g0389941 29.180 305 166 14 71 342 48 335 1.00e-23 100
Msa0562430 MtrunA17_Chr5g0407781 23.203 306 221 6 53 355 3 297 5.21e-23 97.4
Msa0562430 MtrunA17_Chr4g0055871 29.964 277 165 11 77 335 29 294 8.63e-23 97.1
Msa0562430 MtrunA17_Chr4g0037611 33.742 163 97 4 174 335 1 153 1.05e-22 94.0
Msa0562430 MtrunA17_Chr8g0362741 29.889 271 160 10 11 276 28 273 1.50e-22 95.9
Msa0562430 MtrunA17_Chr2g0293931 33.155 187 113 6 169 344 9 194 1.61e-22 94.0
Msa0562430 MtrunA17_Chr8g0348951 26.667 315 206 10 51 353 6 307 4.92e-22 95.1
Msa0562430 MtrunA17_Chr8g0375591 37.168 113 67 1 20 128 11 123 7.03e-22 90.1
Msa0562430 MtrunA17_Chr2g0314361 49.367 79 40 0 277 355 1 79 9.48e-22 88.2
Msa0562430 MtrunA17_Chr4g0004071 28.094 299 200 7 53 342 7 299 7.77e-21 91.7
Msa0562430 MtrunA17_Chr3g0138351 28.674 279 181 9 73 341 33 303 8.76e-19 85.9
Msa0562430 MtrunA17_Chr7g0247741 28.428 299 185 11 55 338 11 295 1.30e-18 85.5
Msa0562430 MtrunA17_Chr8g0336831 29.752 242 130 10 11 234 23 242 1.40e-18 84.3
Msa0562430 MtrunA17_Chr1g0158011 30.457 197 130 5 164 355 67 261 2.90e-18 83.6
Msa0562430 MtrunA17_Chr4g0004061 27.090 299 198 9 55 341 9 299 1.25e-17 82.4
Msa0562430 MtrunA17_Chr4g0009541 24.834 302 203 10 55 340 7 300 2.61e-17 81.6
Msa0562430 MtrunA17_Chr2g0319521 36.364 110 69 1 167 276 16 124 5.73e-17 76.6
Msa0562430 MtrunA17_Chr8g0375621 57.407 54 23 0 190 243 3 56 1.34e-15 70.5
Msa0562430 MtrunA17_Chr5g0420731 39.241 79 47 1 13 91 6 83 1.99e-14 68.9
Msa0562430 MtrunA17_Chr4g0009561 26.154 325 195 12 55 353 7 312 2.55e-14 72.8
Msa0562430 MtrunA17_Chr8g0364171 34.211 114 70 3 165 276 16 126 5.24e-14 68.6
Msa0562430 MtrunA17_Chr7g0219991 36.364 99 62 1 173 271 254 351 1.08e-13 71.2
Msa0562430 MtrunA17_Chr3g0092581 27.607 163 114 4 177 337 1 161 1.05e-12 66.2
Msa0562430 MtrunA17_Chr1g0158031 28.571 182 125 3 177 355 1 180 3.31e-12 64.7
Msa0562430 MtrunA17_Chr8g0336841 36.145 83 50 1 276 355 9 91 7.57e-12 61.2
Msa0562430 MtrunA17_Chr2g0311611 38.889 72 36 2 212 276 1 71 8.62e-12 60.1
Msa0562430 MtrunA17_Chr1g0167921 30.469 128 82 2 154 275 30 156 9.94e-12 63.2
Msa0562430 MtrunA17_Chr7g0235991 30.579 121 78 2 77 195 46 162 1.33e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0562430 AT1G78550.1 50.000 340 167 2 19 355 17 356 2.49e-113 334
Msa0562430 AT1G17020.1 47.674 344 173 4 18 355 16 358 5.06e-113 333
Msa0562430 AT4G25310.1 54.514 288 126 3 70 355 69 353 2.57e-106 316
Msa0562430 AT4G25300.1 46.667 330 170 4 31 355 28 356 1.23e-103 309
Msa0562430 AT1G17010.1 45.481 343 182 4 18 355 16 358 9.40e-103 307
Msa0562430 AT1G78550.2 52.920 274 128 1 83 355 5 278 5.13e-99 295
Msa0562430 AT4G25310.2 49.826 287 113 4 70 355 69 325 1.49e-86 264
Msa0562430 AT3G21420.1 40.173 346 197 5 20 355 17 362 2.15e-84 260
Msa0562430 AT3G11180.1 39.535 301 179 2 54 351 94 394 1.08e-75 239
Msa0562430 AT3G11180.2 40.702 285 166 2 54 335 94 378 2.50e-73 233
Msa0562430 AT5G05600.1 35.976 328 203 3 31 351 38 365 2.83e-73 232
Msa0562430 AT2G38240.1 35.366 328 206 4 31 353 23 349 5.59e-72 228
Msa0562430 AT3G55970.1 36.499 337 202 7 30 354 24 360 5.21e-70 223
Msa0562430 AT5G54000.2 37.898 314 188 4 47 355 38 349 9.06e-67 214
Msa0562430 AT1G49390.1 36.336 333 203 6 30 355 18 348 1.23e-66 214
Msa0562430 AT5G20400.1 35.652 345 210 7 19 355 8 348 1.24e-66 214
Msa0562430 AT5G20550.1 36.923 325 182 8 19 328 8 324 1.12e-61 201
Msa0562430 AT5G54000.1 38.376 271 163 3 87 355 1 269 8.86e-60 194
Msa0562430 AT1G49390.2 37.079 267 164 3 87 351 1 265 2.38e-59 192
Msa0562430 AT4G16330.2 35.621 306 182 6 54 353 66 362 2.71e-59 196
Msa0562430 AT4G25300.2 50.000 190 94 1 167 355 73 262 4.52e-59 192
Msa0562430 AT1G06640.1 32.533 375 213 12 3 355 13 369 4.15e-56 187
Msa0562430 AT3G19000.1 35.873 315 179 8 55 351 32 341 3.21e-55 184
Msa0562430 AT5G59540.1 31.768 362 215 10 11 355 20 366 1.01e-54 184
Msa0562430 AT1G06650.2 31.452 372 221 13 3 355 13 369 2.23e-54 183
Msa0562430 AT5G24530.1 32.722 327 209 7 31 351 15 336 3.84e-54 181
Msa0562430 AT3G19010.1 33.542 319 190 7 50 351 23 336 6.78e-54 181
Msa0562430 AT3G19010.4 33.542 319 190 7 50 351 23 336 6.78e-54 181
Msa0562430 AT1G06620.1 31.868 364 209 8 11 355 22 365 4.84e-53 179
Msa0562430 AT5G08640.2 35.463 313 192 6 30 336 18 326 5.98e-53 178
Msa0562430 AT5G08640.1 35.463 313 192 6 30 336 18 326 5.98e-53 178
Msa0562430 AT3G13610.1 32.888 374 215 14 1 355 5 361 9.93e-53 178
Msa0562430 AT5G59530.1 33.058 363 198 12 16 355 24 364 2.55e-52 177
Msa0562430 AT1G04380.1 32.268 313 190 5 54 355 44 345 6.65e-52 176
Msa0562430 AT1G55290.1 37.143 315 173 13 53 355 60 361 1.28e-51 176
Msa0562430 AT1G77330.1 36.823 277 147 7 54 315 2 265 1.79e-51 173
Msa0562430 AT1G04350.1 31.215 362 214 9 11 355 17 360 1.87e-51 175
Msa0562430 AT2G36690.2 32.440 336 212 9 31 355 32 363 1.94e-50 172
Msa0562430 AT2G36690.1 32.440 336 212 9 31 355 32 363 1.94e-50 172
Msa0562430 AT5G43440.1 32.410 361 217 12 10 355 17 365 3.38e-50 172
Msa0562430 AT4G22880.1 33.962 318 187 9 29 327 16 329 5.35e-50 171
Msa0562430 AT4G22880.2 33.962 318 187 9 29 327 16 329 5.35e-50 171
Msa0562430 AT4G22880.3 33.962 318 187 9 29 327 16 329 5.35e-50 171
Msa0562430 AT4G10500.1 31.118 331 220 7 29 354 18 345 8.08e-50 170
Msa0562430 AT1G06645.1 29.235 366 234 9 3 355 26 379 3.85e-49 169
Msa0562430 AT5G43450.1 31.006 358 210 11 16 355 24 362 9.57e-49 168
Msa0562430 AT1G03410.2 32.055 365 226 10 3 355 7 361 4.06e-48 166
Msa0562430 AT1G03410.1 32.055 365 226 10 3 355 44 398 7.02e-48 167
Msa0562430 AT3G55970.2 36.680 259 152 7 30 276 24 282 8.60e-48 164
Msa0562430 AT4G16330.1 36.471 255 151 5 105 353 7 256 1.14e-47 162
Msa0562430 AT4G10490.1 29.179 329 226 6 31 354 18 344 1.51e-47 164
Msa0562430 AT1G03400.1 31.921 354 214 9 3 346 7 343 1.81e-47 164
Msa0562430 AT5G05600.2 33.202 253 162 3 31 276 38 290 4.87e-47 161
Msa0562430 AT2G30830.1 30.919 359 208 11 16 355 21 358 7.25e-47 163
Msa0562430 AT3G61400.1 31.635 373 219 14 4 355 13 370 8.99e-47 163
Msa0562430 AT4G25420.1 32.432 333 205 10 28 345 37 364 8.62e-46 160
Msa0562430 AT5G07200.1 30.564 337 211 8 22 339 28 360 9.51e-46 160
Msa0562430 AT3G19010.3 31.975 319 165 8 50 351 23 306 1.44e-45 158
Msa0562430 AT1G12010.1 28.716 296 199 5 56 347 8 295 4.43e-45 157
Msa0562430 AT3G60290.1 30.091 329 206 9 37 354 38 353 5.78e-45 158
Msa0562430 AT1G05010.1 31.169 308 191 7 52 347 1 299 8.34e-45 156
Msa0562430 AT2G30840.1 29.787 376 220 12 3 355 8 362 3.03e-44 156
Msa0562430 AT1G15550.1 33.456 272 170 7 72 335 69 337 4.74e-44 155
Msa0562430 AT4G21200.1 32.997 297 184 6 55 344 42 330 7.16e-44 154
Msa0562430 AT2G19590.1 35.897 273 156 7 55 319 11 272 1.89e-43 152
Msa0562430 AT1G62380.1 29.514 288 191 5 56 339 8 287 6.43e-43 151
Msa0562430 AT2G44800.1 28.704 324 219 7 30 344 23 343 2.27e-42 151
Msa0562430 AT1G60980.1 30.028 353 217 9 9 345 23 361 1.23e-41 149
Msa0562430 AT3G51240.1 30.769 312 206 7 39 344 24 331 1.26e-41 149
Msa0562430 AT1G03400.2 29.581 382 214 10 3 346 7 371 1.47e-41 149
Msa0562430 AT2G30840.3 29.521 376 215 13 3 355 8 356 7.85e-41 147
Msa0562430 AT5G51810.1 31.790 324 198 10 31 339 42 357 2.80e-40 146
Msa0562430 AT3G12900.1 31.818 330 212 10 31 354 33 355 4.68e-40 145
Msa0562430 AT5G63590.1 33.904 292 174 9 55 335 14 297 5.77e-40 143
Msa0562430 AT1G80340.1 32.584 267 169 7 77 335 67 330 8.98e-40 144
Msa0562430 AT1G78440.1 31.148 305 186 9 55 345 18 312 2.64e-39 142
Msa0562430 AT5G07480.1 30.312 320 195 11 55 355 44 354 4.35e-39 142
Msa0562430 AT1G50960.1 31.818 264 168 4 55 312 40 297 1.37e-38 140
Msa0562430 AT1G80330.1 30.159 315 192 8 35 335 33 333 6.03e-38 139
Msa0562430 AT4G21690.1 31.636 275 172 6 74 335 61 332 9.64e-38 139
Msa0562430 AT3G19000.2 32.917 240 141 7 55 276 32 269 1.75e-37 136
Msa0562430 AT2G19590.2 35.417 240 143 5 84 319 26 257 2.21e-37 136
Msa0562430 AT5G63600.1 29.329 283 192 5 55 335 33 309 6.61e-37 135
Msa0562430 AT5G63600.2 29.577 284 191 6 55 335 33 310 1.89e-36 134
Msa0562430 AT3G49620.1 34.848 264 140 7 73 314 63 316 2.88e-36 135
Msa0562430 AT1G06640.2 31.959 291 162 10 3 275 13 285 1.03e-35 132
Msa0562430 AT2G25450.1 27.838 370 232 12 3 355 8 359 1.15e-35 133
Msa0562430 AT1G06640.3 31.849 292 163 10 3 276 13 286 1.15e-35 131
Msa0562430 AT3G19010.2 31.837 245 148 6 50 277 23 265 1.98e-35 131
Msa0562430 AT1G44090.1 32.573 307 183 9 31 322 43 340 2.14e-35 133
Msa0562430 AT2G34555.1 28.966 290 188 8 55 335 27 307 4.78e-34 128
Msa0562430 AT1G06650.1 29.592 294 177 11 3 281 13 291 7.96e-34 127
Msa0562430 AT1G47990.1 28.155 309 192 12 53 344 13 308 8.57e-34 127
Msa0562430 AT4G25420.2 32.184 261 160 9 28 276 37 292 1.56e-33 126
Msa0562430 AT1G02400.1 29.260 311 195 12 50 345 19 319 1.95e-33 127
Msa0562430 AT1G30040.1 26.733 303 201 9 53 344 29 321 1.40e-32 124
Msa0562430 AT3G50210.4 31.313 297 164 9 52 314 5 295 3.66e-32 123
Msa0562430 AT3G50210.1 31.313 297 164 9 52 314 5 295 3.66e-32 123
Msa0562430 AT3G50210.3 31.313 297 164 9 52 314 5 295 3.66e-32 123
Msa0562430 AT1G06620.2 30.877 285 153 8 11 275 22 282 7.55e-32 121
Msa0562430 AT3G49630.1 30.717 293 160 9 55 314 9 291 8.58e-32 122
Msa0562430 AT3G51240.2 33.023 215 140 3 105 316 7 220 9.94e-32 120
Msa0562430 AT3G49630.3 31.579 266 150 7 71 314 32 287 1.15e-31 122
Msa0562430 AT5G43440.2 32.384 281 166 11 10 278 17 285 5.87e-31 119
Msa0562430 AT1G04380.2 31.330 233 141 4 54 278 44 265 5.99e-31 119
Msa0562430 AT5G12270.1 28.274 336 221 10 31 355 33 359 3.28e-30 119
Msa0562430 AT5G59540.2 29.286 280 169 9 11 276 20 284 4.64e-30 116
Msa0562430 AT5G51810.2 31.923 260 158 9 31 279 42 293 7.61e-30 116
Msa0562430 AT5G43450.2 30.037 273 157 10 18 275 26 279 1.47e-29 115
Msa0562430 AT3G61400.2 30.345 290 171 11 4 276 13 288 8.39e-29 113
Msa0562430 AT5G63595.1 28.782 271 165 7 43 309 13 259 1.35e-28 112
Msa0562430 AT5G07480.2 30.332 211 137 4 153 355 37 245 1.41e-28 111
Msa0562430 AT5G43935.1 28.956 297 182 8 42 335 12 282 1.16e-27 110
Msa0562430 AT4G23340.1 32.042 284 169 9 77 347 30 302 2.32e-26 107
Msa0562430 AT2G30840.2 27.986 293 170 10 3 275 8 279 7.50e-26 105
Msa0562430 AT3G46500.5 29.236 301 188 11 57 335 11 308 2.48e-25 104
Msa0562430 AT3G47190.1 29.242 277 145 9 55 303 32 285 1.51e-24 102
Msa0562430 AT5G63580.2 29.018 224 151 6 53 272 17 236 2.20e-23 97.4
Msa0562430 AT5G63580.1 29.018 224 151 6 53 272 17 236 2.58e-23 97.4
Msa0562430 AT3G46500.7 30.483 269 162 11 57 303 11 276 2.82e-22 95.9
Msa0562430 AT1G52820.1 29.470 302 193 10 51 341 9 301 6.88e-22 95.1
Msa0562430 AT1G30040.2 27.660 235 149 9 53 276 29 253 2.16e-21 92.8
Msa0562430 AT3G50210.2 33.939 165 103 3 156 314 49 213 2.23e-20 89.4
Msa0562430 AT3G49630.2 33.544 158 102 3 159 314 62 218 3.86e-20 89.0
Msa0562430 AT1G14130.1 25.168 298 203 8 55 345 9 293 7.17e-20 89.4
Msa0562430 AT3G46490.1 26.923 312 196 9 53 335 7 315 1.44e-19 88.6
Msa0562430 AT1G02400.2 27.059 255 166 10 50 292 19 265 1.87e-19 87.4
Msa0562430 AT3G46490.2 27.817 284 173 9 53 307 7 287 9.34e-19 86.3
Msa0562430 AT4G16765.6 32.178 202 122 7 151 340 42 240 1.87e-18 84.0
Msa0562430 AT4G16765.1 32.178 202 122 7 151 340 42 240 1.87e-18 84.0
Msa0562430 AT4G16765.2 32.178 202 122 7 151 340 42 240 1.87e-18 84.0
Msa0562430 AT5G58660.1 26.502 283 162 9 54 303 33 302 8.69e-18 84.0
Msa0562430 AT4G23340.2 35.838 173 98 5 180 347 20 184 1.07e-17 80.9
Msa0562430 AT1G14120.2 26.019 319 194 9 55 355 8 302 1.14e-17 83.2
Msa0562430 AT1G14120.1 26.019 319 194 9 55 355 8 302 1.14e-17 83.2
Msa0562430 AT1G14120.3 26.019 319 194 9 55 355 8 302 1.14e-17 83.2
Msa0562430 AT1G35190.2 30.651 261 128 12 68 303 23 255 4.29e-17 81.3
Msa0562430 AT4G16765.3 31.746 189 114 7 151 327 42 227 9.41e-17 79.0
Msa0562430 AT1G35190.1 30.418 263 149 11 68 303 23 278 3.95e-16 79.0
Msa0562430 AT1G52800.1 27.376 263 165 11 77 328 38 285 1.12e-15 77.4
Msa0562430 AT4G03070.1 27.451 306 186 12 55 339 14 304 2.11e-14 73.6
Msa0562430 AT4G16770.1 29.858 211 127 9 77 269 42 249 1.06e-13 70.9
Msa0562430 AT4G22870.1 42.857 84 47 1 245 327 2 85 2.87e-13 66.2
Msa0562430 AT4G16765.5 35.833 120 70 3 226 340 77 194 6.58e-13 67.4
Msa0562430 AT5G58660.2 25.287 261 148 9 54 282 33 278 1.82e-12 67.4
Msa0562430 AT3G46500.4 26.984 189 125 6 170 350 1 184 1.84e-12 65.9
Msa0562430 AT4G22870.2 40.230 87 48 2 245 327 40 126 1.02e-11 62.8
Msa0562430 AT4G16765.4 31.126 151 90 6 144 282 35 183 7.53e-11 61.2

Find 69 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATTTCTGCTTCAAATT+TGG 0.136100 4_1:+62331637 None:intergenic
TTCCTTCGTATCCATCTTTA+TGG 0.148808 4_1:+62332451 None:intergenic
ACCAAATTTGAAGCAGAAAT+TGG 0.176209 4_1:-62331638 Msa0562430:CDS
AGGATTGAGGGTTCTTTATC+TGG 0.179313 4_1:+62333331 None:intergenic
GAGAGCACTCATTCAATTCT+TGG 0.207479 4_1:-62333412 Msa0562430:CDS
ACCATCCTTAATCAGCTTAA+TGG 0.230605 4_1:-62332314 Msa0562430:CDS
CAACTCCATTAAGCTGATTA+AGG 0.246921 4_1:+62332309 None:intergenic
TCATTCAATTCTTGGTGTTA+TGG 0.254788 4_1:-62333404 Msa0562430:CDS
AGATGATGCCATGTTGATTT+TGG 0.256096 4_1:+62333453 None:intergenic
AGATTAAGAAAGATGGAGTT+TGG 0.278559 4_1:-62332277 Msa0562430:CDS
CAAAGATTGGGGTTTCTTCC+AGG 0.305283 4_1:-62333209 Msa0562430:intron
TGTGGCTTTCTTCTTGCAAT+TGG 0.325601 4_1:+62332752 None:intergenic
TTTGTTCAAAAGCATGTTGA+TGG 0.327425 4_1:-62331579 Msa0562430:CDS
GAACTTATCAAACTCTTTGC+TGG 0.345699 4_1:+62331614 None:intergenic
AGGGATTGATTTCATTTGTT+AGG 0.349307 4_1:+62333311 None:intergenic
AGTGATTAATAAACCCGAAA+TGG 0.356205 4_1:-62333377 Msa0562430:CDS
ATGATGGAAATCAATCAATA+AGG 0.373969 4_1:-62332412 Msa0562430:CDS
TATTCTCAGCATGCAAAGAT+TGG 0.378321 4_1:-62333222 Msa0562430:CDS
ATTCTCAGCATGCAAAGATT+GGG 0.402514 4_1:-62333221 Msa0562430:CDS
ATTTCATTTGTTAGGATTGA+GGG 0.407447 4_1:+62333319 None:intergenic
GGACTAGAGATTAAGAAAGA+TGG 0.432535 4_1:-62332284 Msa0562430:CDS
ACGAGCTCCGGTTGCGGACA+TGG 0.437698 4_1:+62332374 None:intergenic
GATTTCATTTGTTAGGATTG+AGG 0.447457 4_1:+62333318 None:intergenic
AGTATTGTCACCACATATCA+AGG 0.455503 4_1:+62333258 None:intergenic
AATCAGCTTAATGGAGTTGA+AGG 0.457519 4_1:-62332305 Msa0562430:CDS
GATAAGCACCTTAGTGATGA+TGG 0.459040 4_1:+62332713 None:intergenic
GTGATTAATAAACCCGAAAT+GGG 0.460139 4_1:-62333376 Msa0562430:CDS
ATATTAACTACAAAAGCATC+TGG 0.461880 4_1:+62332236 None:intergenic
ATCTTAGAATTGAAGAAACT+TGG 0.471265 4_1:-62332503 Msa0562430:CDS
ATAGAGAATATGTTTGATGA+TGG 0.481624 4_1:-62332428 Msa0562430:CDS
TACAAAAGCATCTGGAAGAA+AGG 0.481736 4_1:+62332244 None:intergenic
CTATCCGCCATGTCCGCAAC+CGG 0.490733 4_1:-62332381 Msa0562430:CDS
GGATTGAGGGTTCTTTATCT+GGG 0.495260 4_1:+62333332 None:intergenic
TCTAAATGGGAAGACAAACT+TGG 0.498065 4_1:-62331525 Msa0562430:CDS
AATCAACATGGCATCATCTC+AGG 0.499386 4_1:-62333449 Msa0562430:exon
TTGATGCCGTCCACGAGCTC+CGG 0.504056 4_1:+62332362 None:intergenic
CCGTCCACGAGCTCCGGTTG+CGG 0.508054 4_1:+62332368 None:intergenic
AGTTAATATTGGAGACATCA+TGG 0.510828 4_1:-62332222 Msa0562430:CDS
AACCCTCACTCAGACGGTTC+CGG 0.521148 4_1:-62332341 Msa0562430:CDS
GACTTTCAAACCTTGATATG+TGG 0.523264 4_1:-62333268 Msa0562430:CDS
CTGATTAAGGATGGTTATGC+CGG 0.526310 4_1:+62332322 None:intergenic
ATGTCCGCAACCGGAGCTCG+TGG 0.526627 4_1:-62332372 Msa0562430:CDS
GGTTTCAGTAAACAAAGAAA+AGG 0.544690 4_1:-62331690 Msa0562430:CDS
ATTGGGAAAAGCCATAAAGA+TGG 0.547819 4_1:-62332462 Msa0562430:CDS
AGACAAACTTGGAGAGAATG+AGG 0.547939 4_1:-62331514 Msa0562430:CDS
TCCATTAAGCTGATTAAGGA+TGG 0.551241 4_1:+62332313 None:intergenic
CTCAACTCCCATCATCACTA+AGG 0.551331 4_1:-62332721 Msa0562430:intron
TCTACTCTAGCATAGAGCAC+AGG 0.552312 4_1:-62331712 Msa0562430:CDS
TGCCGGAACCGTCTGAGTGA+GGG 0.565095 4_1:+62332339 None:intergenic
TTCTCAGCATGCAAAGATTG+GGG 0.568244 4_1:-62333220 Msa0562430:CDS
CTTAGTGATGATGGGAGTTG+AGG 0.569423 4_1:+62332722 None:intergenic
ATGCCGGAACCGTCTGAGTG+AGG 0.573602 4_1:+62332338 None:intergenic
CCGCAACCGGAGCTCGTGGA+CGG 0.576978 4_1:-62332368 Msa0562430:CDS
AGCCATAAAGATGGATACGA+AGG 0.580877 4_1:-62332453 Msa0562430:CDS
GGAGCTGTCATTAGATGTGA+AGG 0.581827 4_1:-62332818 Msa0562430:CDS
TTCTAAGATATATGACTCCA+AGG 0.586022 4_1:+62332517 None:intergenic
ATAAGCACCTTAGTGATGAT+GGG 0.587837 4_1:+62332714 None:intergenic
GCGTATGTGAAGGGATACCT+TGG 0.606896 4_1:-62332534 Msa0562430:intron
TATATGCAGGTGGTGAATCA+CGG 0.608081 4_1:-62332953 Msa0562430:intron
GCATCTGGAAGAAAGGTCAC+AGG 0.608787 4_1:+62332251 None:intergenic
CTACTCTAGCATAGAGCACA+GGG 0.608995 4_1:-62331711 Msa0562430:CDS
GGCATCAACCCTCACTCAGA+CGG 0.618880 4_1:-62332347 Msa0562430:CDS
AAAACGGGAATTGATTGCAA+GGG 0.620044 4_1:+62333292 None:intergenic
CAACATGGCATCATCTCAGG+TGG 0.641861 4_1:-62333446 Msa0562430:exon
TTTACAGATTCTAAGCAATG+GGG 0.672405 4_1:-62331735 Msa0562430:intron
ACAAAATACAAAATAAGACA+AGG 0.680547 4_1:-62332857 Msa0562430:CDS
AGCTCCGGTTGCGGACATGG+CGG 0.693794 4_1:+62332377 None:intergenic
ATAACAAACCAAAATCAACA+TGG 0.724818 4_1:-62333461 Msa0562430:exon
TAATATTGGAGACATCATGG+AGG 0.754731 4_1:-62332219 Msa0562430:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAATATATATCTTAAAAAT+TGG - chr4_1:62331869-62331888 Msa0562430:intron 10.0%
!!! TTGCATTTTTTTTTTTTTTA+TGG - chr4_1:62331962-62331981 Msa0562430:intron 10.0%
!! ATAATATATAGTATCTAATT+AGG + chr4_1:62332392-62332411 None:intergenic 10.0%
!! TGAATATATATCTTAAAAAT+TGG - chr4_1:62331869-62331888 Msa0562430:intron 10.0%
!!! TTGCATTTTTTTTTTTTTTA+TGG - chr4_1:62331962-62331981 Msa0562430:intron 10.0%
!! ATAATATATAGTATCTAATT+AGG + chr4_1:62332392-62332411 None:intergenic 10.0%
!! TGTTGAATAAAAATTACATA+TGG + chr4_1:62332341-62332360 None:intergenic 15.0%
!! ATTTATATAATAGGTATAGT+AGG + chr4_1:62332864-62332883 None:intergenic 15.0%
!!! TTATCTTTTTGATACAATAA+TGG + chr4_1:62332957-62332976 None:intergenic 15.0%
!!! ATTTCTTGAAAAAAAGTATT+TGG + chr4_1:62333425-62333444 None:intergenic 15.0%
!!! TTTTTTTCAAGAAATCTAAA+TGG - chr4_1:62333430-62333449 Msa0562430:CDS 15.0%
!!! TTTTTTCAAGAAATCTAAAT+GGG - chr4_1:62333431-62333450 Msa0562430:CDS 15.0%
!! TGTTGAATAAAAATTACATA+TGG + chr4_1:62332341-62332360 None:intergenic 15.0%
!! ATTTATATAATAGGTATAGT+AGG + chr4_1:62332864-62332883 None:intergenic 15.0%
!!! TTATCTTTTTGATACAATAA+TGG + chr4_1:62332957-62332976 None:intergenic 15.0%
!!! ATTTCTTGAAAAAAAGTATT+TGG + chr4_1:62333425-62333444 None:intergenic 15.0%
!!! TTTTTTTCAAGAAATCTAAA+TGG - chr4_1:62333430-62333449 Msa0562430:CDS 15.0%
!!! TTTTTTCAAGAAATCTAAAT+GGG - chr4_1:62333431-62333450 Msa0562430:CDS 15.0%
!! ACAAAATACAAAATAAGACA+AGG - chr4_1:62332112-62332131 Msa0562430:intron 20.0%
!!! ATGACACTTTTTGAATTATT+GGG - chr4_1:62332490-62332509 Msa0562430:CDS 20.0%
!!! CAATAAAAAATGTGCTATTT+AGG + chr4_1:62333042-62333061 None:intergenic 20.0%
!!! CTAAATAGCACATTTTTTAT+TGG - chr4_1:62333040-62333059 Msa0562430:intron 20.0%
!!! TTTTAATAACTCTCTTCTTA+GGG - chr4_1:62333106-62333125 Msa0562430:intron 20.0%
!!! ATATCTTTAACTCATGTTTT+GGG - chr4_1:62333207-62333226 Msa0562430:intron 20.0%
!! ACAAAATACAAAATAAGACA+AGG - chr4_1:62332112-62332131 Msa0562430:intron 20.0%
!!! ATGACACTTTTTGAATTATT+GGG - chr4_1:62332490-62332509 Msa0562430:CDS 20.0%
!!! CAATAAAAAATGTGCTATTT+AGG + chr4_1:62333042-62333061 None:intergenic 20.0%
!!! CTAAATAGCACATTTTTTAT+TGG - chr4_1:62333040-62333059 Msa0562430:intron 20.0%
!!! TTTTAATAACTCTCTTCTTA+GGG - chr4_1:62333106-62333125 Msa0562430:intron 20.0%
!!! ATATCTTTAACTCATGTTTT+GGG - chr4_1:62333207-62333226 Msa0562430:intron 20.0%
! ATAACAAACCAAAATCAACA+TGG - chr4_1:62331508-62331527 Msa0562430:CDS 25.0%
!! ATTTCATTTGTTAGGATTGA+GGG + chr4_1:62331653-62331672 None:intergenic 25.0%
! TGAACTCTAATTTATAAACC+TGG + chr4_1:62331781-62331800 None:intergenic 25.0%
! AAATTGATGCAATTATATGC+AGG - chr4_1:62332003-62332022 Msa0562430:intron 25.0%
!!! TATTTTGTTTTCTCTTCAAC+AGG + chr4_1:62332100-62332119 None:intergenic 25.0%
! ATCTTAGAATTGAAGAAACT+TGG - chr4_1:62332466-62332485 Msa0562430:CDS 25.0%
!!! CATGACACTTTTTGAATTAT+TGG - chr4_1:62332489-62332508 Msa0562430:CDS 25.0%
! ATAGAGAATATGTTTGATGA+TGG - chr4_1:62332541-62332560 Msa0562430:intron 25.0%
!! ATGATGGAAATCAATCAATA+AGG - chr4_1:62332557-62332576 Msa0562430:intron 25.0%
!!! ATATTAACTACAAAAGCATC+TGG + chr4_1:62332736-62332755 None:intergenic 25.0%
!! GATGCTTTTGTAGTTAATAT+TGG - chr4_1:62332736-62332755 Msa0562430:CDS 25.0%
! TGTAATAATGGCATTATTTG+TGG - chr4_1:62333000-62333019 Msa0562430:intron 25.0%
! CTAAGAAGAGAGTTATTAAA+AGG + chr4_1:62333107-62333126 None:intergenic 25.0%
!! CTTTTAATAACTCTCTTCTT+AGG - chr4_1:62333105-62333124 Msa0562430:intron 25.0%
! CTTAGGGTTTCATTAAAAAA+TGG - chr4_1:62333122-62333141 Msa0562430:intron 25.0%
!! CATATCTTTAACTCATGTTT+TGG - chr4_1:62333206-62333225 Msa0562430:intron 25.0%
!! ATTTTACAGATTCTAAGCAA+TGG - chr4_1:62333232-62333251 Msa0562430:CDS 25.0%
!! TTTTACAGATTCTAAGCAAT+GGG - chr4_1:62333233-62333252 Msa0562430:CDS 25.0%
! ATAACAAACCAAAATCAACA+TGG - chr4_1:62331508-62331527 Msa0562430:CDS 25.0%
!! ATTTCATTTGTTAGGATTGA+GGG + chr4_1:62331653-62331672 None:intergenic 25.0%
! TGAACTCTAATTTATAAACC+TGG + chr4_1:62331781-62331800 None:intergenic 25.0%
! AAATTGATGCAATTATATGC+AGG - chr4_1:62332003-62332022 Msa0562430:intron 25.0%
!!! TATTTTGTTTTCTCTTCAAC+AGG + chr4_1:62332100-62332119 None:intergenic 25.0%
! ATCTTAGAATTGAAGAAACT+TGG - chr4_1:62332466-62332485 Msa0562430:CDS 25.0%
!!! CATGACACTTTTTGAATTAT+TGG - chr4_1:62332489-62332508 Msa0562430:CDS 25.0%
! ATAGAGAATATGTTTGATGA+TGG - chr4_1:62332541-62332560 Msa0562430:intron 25.0%
!! ATGATGGAAATCAATCAATA+AGG - chr4_1:62332557-62332576 Msa0562430:intron 25.0%
!!! ATATTAACTACAAAAGCATC+TGG + chr4_1:62332736-62332755 None:intergenic 25.0%
!! GATGCTTTTGTAGTTAATAT+TGG - chr4_1:62332736-62332755 Msa0562430:CDS 25.0%
! TGTAATAATGGCATTATTTG+TGG - chr4_1:62333000-62333019 Msa0562430:intron 25.0%
! CTAAGAAGAGAGTTATTAAA+AGG + chr4_1:62333107-62333126 None:intergenic 25.0%
!! CTTTTAATAACTCTCTTCTT+AGG - chr4_1:62333105-62333124 Msa0562430:intron 25.0%
! CTTAGGGTTTCATTAAAAAA+TGG - chr4_1:62333122-62333141 Msa0562430:intron 25.0%
!! CATATCTTTAACTCATGTTT+TGG - chr4_1:62333206-62333225 Msa0562430:intron 25.0%
!! ATTTTACAGATTCTAAGCAA+TGG - chr4_1:62333232-62333251 Msa0562430:CDS 25.0%
!! TTTTACAGATTCTAAGCAAT+GGG - chr4_1:62333233-62333252 Msa0562430:CDS 25.0%
!! TCATTCAATTCTTGGTGTTA+TGG - chr4_1:62331565-62331584 Msa0562430:CDS 30.0%
AGTGATTAATAAACCCGAAA+TGG - chr4_1:62331592-62331611 Msa0562430:CDS 30.0%
GTGATTAATAAACCCGAAAT+GGG - chr4_1:62331593-62331612 Msa0562430:CDS 30.0%
!!! ATTTTTGGTATTCCCATTTC+GGG + chr4_1:62331608-62331627 None:intergenic 30.0%
!!! CATTTTTGGTATTCCCATTT+CGG + chr4_1:62331609-62331628 None:intergenic 30.0%
! GATTTCATTTGTTAGGATTG+AGG + chr4_1:62331654-62331673 None:intergenic 30.0%
! AGGGATTGATTTCATTTGTT+AGG + chr4_1:62331661-62331680 None:intergenic 30.0%
AAGGTTTGAAAGTCAAAAAC+GGG + chr4_1:62331695-62331714 None:intergenic 30.0%
CAAGGTTTGAAAGTCAAAAA+CGG + chr4_1:62331696-62331715 None:intergenic 30.0%
ACAGGAAGCTTGAAAAAATT+TGG + chr4_1:62332082-62332101 None:intergenic 30.0%
! ATAAGACAAGGAGATTTTCA+AGG - chr4_1:62332124-62332143 Msa0562430:intron 30.0%
TGAAGGTCAAAAACTTGATT+GGG - chr4_1:62332168-62332187 Msa0562430:intron 30.0%
! ATTTTTGTATGCGTATGTGA+AGG - chr4_1:62332425-62332444 Msa0562430:CDS 30.0%
! TTTTTGTATGCGTATGTGAA+GGG - chr4_1:62332426-62332445 Msa0562430:CDS 30.0%
!! TTCTAAGATATATGACTCCA+AGG + chr4_1:62332455-62332474 None:intergenic 30.0%
AGATTAAGAAAGATGGAGTT+TGG - chr4_1:62332692-62332711 Msa0562430:intron 30.0%
AGTTAATATTGGAGACATCA+TGG - chr4_1:62332747-62332766 Msa0562430:CDS 30.0%
!! AAAGTATTTTCAATGAGTCG+TGG - chr4_1:62332917-62332936 Msa0562430:CDS 30.0%
! AAGTATTTTCAATGAGTCGT+GGG - chr4_1:62332918-62332937 Msa0562430:CDS 30.0%
TTATTACACCATAACACATG+TGG + chr4_1:62332988-62333007 None:intergenic 30.0%
CATGTGTTATGGTGTAATAA+TGG - chr4_1:62332988-62333007 Msa0562430:intron 30.0%
! CTATTTAGGAGCATATTGAA+TGG + chr4_1:62333028-62333047 None:intergenic 30.0%
GAGTTATTAAAAGGAAGATG+AGG + chr4_1:62333098-62333117 None:intergenic 30.0%
TTTACAGATTCTAAGCAATG+GGG - chr4_1:62333234-62333253 Msa0562430:CDS 30.0%
GGTTTCAGTAAACAAAGAAA+AGG - chr4_1:62333279-62333298 Msa0562430:CDS 30.0%
! ACCAAATTTGAAGCAGAAAT+TGG - chr4_1:62333331-62333350 Msa0562430:CDS 30.0%
TCCAATTTCTGCTTCAAATT+TGG + chr4_1:62333335-62333354 None:intergenic 30.0%
! ATCAACATGCTTTTGAACAA+AGG + chr4_1:62333391-62333410 None:intergenic 30.0%
! TTTGTTCAAAAGCATGTTGA+TGG - chr4_1:62333390-62333409 Msa0562430:CDS 30.0%
!! TCATTCAATTCTTGGTGTTA+TGG - chr4_1:62331565-62331584 Msa0562430:CDS 30.0%
AGTGATTAATAAACCCGAAA+TGG - chr4_1:62331592-62331611 Msa0562430:CDS 30.0%
GTGATTAATAAACCCGAAAT+GGG - chr4_1:62331593-62331612 Msa0562430:CDS 30.0%
!!! ATTTTTGGTATTCCCATTTC+GGG + chr4_1:62331608-62331627 None:intergenic 30.0%
!!! CATTTTTGGTATTCCCATTT+CGG + chr4_1:62331609-62331628 None:intergenic 30.0%
! GATTTCATTTGTTAGGATTG+AGG + chr4_1:62331654-62331673 None:intergenic 30.0%
! AGGGATTGATTTCATTTGTT+AGG + chr4_1:62331661-62331680 None:intergenic 30.0%
AAGGTTTGAAAGTCAAAAAC+GGG + chr4_1:62331695-62331714 None:intergenic 30.0%
CAAGGTTTGAAAGTCAAAAA+CGG + chr4_1:62331696-62331715 None:intergenic 30.0%
ACAGGAAGCTTGAAAAAATT+TGG + chr4_1:62332082-62332101 None:intergenic 30.0%
! ATAAGACAAGGAGATTTTCA+AGG - chr4_1:62332124-62332143 Msa0562430:intron 30.0%
TGAAGGTCAAAAACTTGATT+GGG - chr4_1:62332168-62332187 Msa0562430:intron 30.0%
! ATTTTTGTATGCGTATGTGA+AGG - chr4_1:62332425-62332444 Msa0562430:CDS 30.0%
! TTTTTGTATGCGTATGTGAA+GGG - chr4_1:62332426-62332445 Msa0562430:CDS 30.0%
!! TTCTAAGATATATGACTCCA+AGG + chr4_1:62332455-62332474 None:intergenic 30.0%
AGATTAAGAAAGATGGAGTT+TGG - chr4_1:62332692-62332711 Msa0562430:intron 30.0%
AGTTAATATTGGAGACATCA+TGG - chr4_1:62332747-62332766 Msa0562430:CDS 30.0%
!! AAAGTATTTTCAATGAGTCG+TGG - chr4_1:62332917-62332936 Msa0562430:CDS 30.0%
! AAGTATTTTCAATGAGTCGT+GGG - chr4_1:62332918-62332937 Msa0562430:CDS 30.0%
TTATTACACCATAACACATG+TGG + chr4_1:62332988-62333007 None:intergenic 30.0%
CATGTGTTATGGTGTAATAA+TGG - chr4_1:62332988-62333007 Msa0562430:intron 30.0%
! CTATTTAGGAGCATATTGAA+TGG + chr4_1:62333028-62333047 None:intergenic 30.0%
GAGTTATTAAAAGGAAGATG+AGG + chr4_1:62333098-62333117 None:intergenic 30.0%
TTTACAGATTCTAAGCAATG+GGG - chr4_1:62333234-62333253 Msa0562430:CDS 30.0%
GGTTTCAGTAAACAAAGAAA+AGG - chr4_1:62333279-62333298 Msa0562430:CDS 30.0%
! ACCAAATTTGAAGCAGAAAT+TGG - chr4_1:62333331-62333350 Msa0562430:CDS 30.0%
TCCAATTTCTGCTTCAAATT+TGG + chr4_1:62333335-62333354 None:intergenic 30.0%
! ATCAACATGCTTTTGAACAA+AGG + chr4_1:62333391-62333410 None:intergenic 30.0%
! TTTGTTCAAAAGCATGTTGA+TGG - chr4_1:62333390-62333409 Msa0562430:CDS 30.0%
!!! AGATGATGCCATGTTGATTT+TGG + chr4_1:62331519-62331538 None:intergenic 35.0%
AAAACGGGAATTGATTGCAA+GGG + chr4_1:62331680-62331699 None:intergenic 35.0%
AAAAACGGGAATTGATTGCA+AGG + chr4_1:62331681-62331700 None:intergenic 35.0%
GACTTTCAAACCTTGATATG+TGG - chr4_1:62331701-62331720 Msa0562430:CDS 35.0%
AGTATTGTCACCACATATCA+AGG + chr4_1:62331714-62331733 None:intergenic 35.0%
TATTCTCAGCATGCAAAGAT+TGG - chr4_1:62331747-62331766 Msa0562430:intron 35.0%
ATTCTCAGCATGCAAAGATT+GGG - chr4_1:62331748-62331767 Msa0562430:intron 35.0%
TTGATGCAATTATATGCAGG+TGG - chr4_1:62332006-62332025 Msa0562430:intron 35.0%
!! CAAGGAGATTTTCAAGGTTA+TGG - chr4_1:62332130-62332149 Msa0562430:intron 35.0%
GTGAAGGTCAAAAACTTGAT+TGG - chr4_1:62332167-62332186 Msa0562430:intron 35.0%
GAAGGTCAAAAACTTGATTG+GGG - chr4_1:62332169-62332188 Msa0562430:intron 35.0%
ATAAGCACCTTAGTGATGAT+GGG + chr4_1:62332258-62332277 None:intergenic 35.0%
ATTGGGAAAAGCCATAAAGA+TGG - chr4_1:62332507-62332526 Msa0562430:CDS 35.0%
TTCCTTCGTATCCATCTTTA+TGG + chr4_1:62332521-62332540 None:intergenic 35.0%
ACCATCCTTAATCAGCTTAA+TGG - chr4_1:62332655-62332674 Msa0562430:intron 35.0%
TCCATTAAGCTGATTAAGGA+TGG + chr4_1:62332659-62332678 None:intergenic 35.0%
CAACTCCATTAAGCTGATTA+AGG + chr4_1:62332663-62332682 None:intergenic 35.0%
AATCAGCTTAATGGAGTTGA+AGG - chr4_1:62332664-62332683 Msa0562430:intron 35.0%
GGACTAGAGATTAAGAAAGA+TGG - chr4_1:62332685-62332704 Msa0562430:intron 35.0%
!! TACAAAAGCATCTGGAAGAA+AGG + chr4_1:62332728-62332747 None:intergenic 35.0%
TAATATTGGAGACATCATGG+AGG - chr4_1:62332750-62332769 Msa0562430:CDS 35.0%
TGACAATGAAATAAAGCACG+TGG - chr4_1:62332823-62332842 Msa0562430:CDS 35.0%
ATAATAGGTATAGTAGGACC+TGG + chr4_1:62332858-62332877 None:intergenic 35.0%
TGCTAAATCCACATGTGTTA+TGG - chr4_1:62332977-62332996 Msa0562430:intron 35.0%
TTAAAAGGAAGATGAGGCAT+GGG + chr4_1:62333092-62333111 None:intergenic 35.0%
ATTAAAAGGAAGATGAGGCA+TGG + chr4_1:62333093-62333112 None:intergenic 35.0%
GAACTTATCAAACTCTTTGC+TGG + chr4_1:62333358-62333377 None:intergenic 35.0%
! AACATGCTTTTGAACAAAGG+TGG + chr4_1:62333388-62333407 None:intergenic 35.0%
TCTAAATGGGAAGACAAACT+TGG - chr4_1:62333444-62333463 Msa0562430:CDS 35.0%
!!! AGATGATGCCATGTTGATTT+TGG + chr4_1:62331519-62331538 None:intergenic 35.0%
AAAACGGGAATTGATTGCAA+GGG + chr4_1:62331680-62331699 None:intergenic 35.0%
AAAAACGGGAATTGATTGCA+AGG + chr4_1:62331681-62331700 None:intergenic 35.0%
GACTTTCAAACCTTGATATG+TGG - chr4_1:62331701-62331720 Msa0562430:CDS 35.0%
AGTATTGTCACCACATATCA+AGG + chr4_1:62331714-62331733 None:intergenic 35.0%
TATTCTCAGCATGCAAAGAT+TGG - chr4_1:62331747-62331766 Msa0562430:intron 35.0%
ATTCTCAGCATGCAAAGATT+GGG - chr4_1:62331748-62331767 Msa0562430:intron 35.0%
TTGATGCAATTATATGCAGG+TGG - chr4_1:62332006-62332025 Msa0562430:intron 35.0%
!! CAAGGAGATTTTCAAGGTTA+TGG - chr4_1:62332130-62332149 Msa0562430:intron 35.0%
GTGAAGGTCAAAAACTTGAT+TGG - chr4_1:62332167-62332186 Msa0562430:intron 35.0%
GAAGGTCAAAAACTTGATTG+GGG - chr4_1:62332169-62332188 Msa0562430:intron 35.0%
ATAAGCACCTTAGTGATGAT+GGG + chr4_1:62332258-62332277 None:intergenic 35.0%
ATTGGGAAAAGCCATAAAGA+TGG - chr4_1:62332507-62332526 Msa0562430:CDS 35.0%
TTCCTTCGTATCCATCTTTA+TGG + chr4_1:62332521-62332540 None:intergenic 35.0%
ACCATCCTTAATCAGCTTAA+TGG - chr4_1:62332655-62332674 Msa0562430:intron 35.0%
TCCATTAAGCTGATTAAGGA+TGG + chr4_1:62332659-62332678 None:intergenic 35.0%
CAACTCCATTAAGCTGATTA+AGG + chr4_1:62332663-62332682 None:intergenic 35.0%
AATCAGCTTAATGGAGTTGA+AGG - chr4_1:62332664-62332683 Msa0562430:intron 35.0%
GGACTAGAGATTAAGAAAGA+TGG - chr4_1:62332685-62332704 Msa0562430:intron 35.0%
!! TACAAAAGCATCTGGAAGAA+AGG + chr4_1:62332728-62332747 None:intergenic 35.0%
TAATATTGGAGACATCATGG+AGG - chr4_1:62332750-62332769 Msa0562430:CDS 35.0%
TGACAATGAAATAAAGCACG+TGG - chr4_1:62332823-62332842 Msa0562430:CDS 35.0%
ATAATAGGTATAGTAGGACC+TGG + chr4_1:62332858-62332877 None:intergenic 35.0%
TGCTAAATCCACATGTGTTA+TGG - chr4_1:62332977-62332996 Msa0562430:intron 35.0%
TTAAAAGGAAGATGAGGCAT+GGG + chr4_1:62333092-62333111 None:intergenic 35.0%
ATTAAAAGGAAGATGAGGCA+TGG + chr4_1:62333093-62333112 None:intergenic 35.0%
GAACTTATCAAACTCTTTGC+TGG + chr4_1:62333358-62333377 None:intergenic 35.0%
! AACATGCTTTTGAACAAAGG+TGG + chr4_1:62333388-62333407 None:intergenic 35.0%
TCTAAATGGGAAGACAAACT+TGG - chr4_1:62333444-62333463 Msa0562430:CDS 35.0%
AATCAACATGGCATCATCTC+AGG - chr4_1:62331520-62331539 Msa0562430:CDS 40.0%
!! GAGAGCACTCATTCAATTCT+TGG - chr4_1:62331557-62331576 Msa0562430:CDS 40.0%
! TCTGGGCGAAGAAACATTTT+TGG + chr4_1:62331623-62331642 None:intergenic 40.0%
GGATTGAGGGTTCTTTATCT+GGG + chr4_1:62331640-62331659 None:intergenic 40.0%
AGGATTGAGGGTTCTTTATC+TGG + chr4_1:62331641-62331660 None:intergenic 40.0%
TTCTCAGCATGCAAAGATTG+GGG - chr4_1:62331749-62331768 Msa0562430:intron 40.0%
TATATGCAGGTGGTGAATCA+CGG - chr4_1:62332016-62332035 Msa0562430:intron 40.0%
TGTGGCTTTCTTCTTGCAAT+TGG + chr4_1:62332220-62332239 None:intergenic 40.0%
GATAAGCACCTTAGTGATGA+TGG + chr4_1:62332259-62332278 None:intergenic 40.0%
AGCCATAAAGATGGATACGA+AGG - chr4_1:62332516-62332535 Msa0562430:CDS 40.0%
CTGATTAAGGATGGTTATGC+CGG + chr4_1:62332650-62332669 None:intergenic 40.0%
AGACAAACTTGGAGAGAATG+AGG - chr4_1:62333455-62333474 Msa0562430:exon 40.0%
AATCAACATGGCATCATCTC+AGG - chr4_1:62331520-62331539 Msa0562430:CDS 40.0%
!! GAGAGCACTCATTCAATTCT+TGG - chr4_1:62331557-62331576 Msa0562430:CDS 40.0%
! TCTGGGCGAAGAAACATTTT+TGG + chr4_1:62331623-62331642 None:intergenic 40.0%
GGATTGAGGGTTCTTTATCT+GGG + chr4_1:62331640-62331659 None:intergenic 40.0%
AGGATTGAGGGTTCTTTATC+TGG + chr4_1:62331641-62331660 None:intergenic 40.0%
TTCTCAGCATGCAAAGATTG+GGG - chr4_1:62331749-62331768 Msa0562430:intron 40.0%
TATATGCAGGTGGTGAATCA+CGG - chr4_1:62332016-62332035 Msa0562430:intron 40.0%
TGTGGCTTTCTTCTTGCAAT+TGG + chr4_1:62332220-62332239 None:intergenic 40.0%
GATAAGCACCTTAGTGATGA+TGG + chr4_1:62332259-62332278 None:intergenic 40.0%
AGCCATAAAGATGGATACGA+AGG - chr4_1:62332516-62332535 Msa0562430:CDS 40.0%
CTGATTAAGGATGGTTATGC+CGG + chr4_1:62332650-62332669 None:intergenic 40.0%
AGACAAACTTGGAGAGAATG+AGG - chr4_1:62333455-62333474 Msa0562430:exon 40.0%
CAAAGATTGGGGTTTCTTCC+AGG - chr4_1:62331760-62331779 Msa0562430:intron 45.0%
GGAGCTGTCATTAGATGTGA+AGG - chr4_1:62332151-62332170 Msa0562430:intron 45.0%
GGGAGTTGAGGAAAAAGATG+TGG + chr4_1:62332238-62332257 None:intergenic 45.0%
!! CTTAGTGATGATGGGAGTTG+AGG + chr4_1:62332250-62332269 None:intergenic 45.0%
CTCAACTCCCATCATCACTA+AGG - chr4_1:62332248-62332267 Msa0562430:CDS 45.0%
TCTACTCTAGCATAGAGCAC+AGG - chr4_1:62333257-62333276 Msa0562430:CDS 45.0%
CTACTCTAGCATAGAGCACA+GGG - chr4_1:62333258-62333277 Msa0562430:CDS 45.0%
CAAAGATTGGGGTTTCTTCC+AGG - chr4_1:62331760-62331779 Msa0562430:intron 45.0%
GGAGCTGTCATTAGATGTGA+AGG - chr4_1:62332151-62332170 Msa0562430:intron 45.0%
GGGAGTTGAGGAAAAAGATG+TGG + chr4_1:62332238-62332257 None:intergenic 45.0%
!! CTTAGTGATGATGGGAGTTG+AGG + chr4_1:62332250-62332269 None:intergenic 45.0%
CTCAACTCCCATCATCACTA+AGG - chr4_1:62332248-62332267 Msa0562430:CDS 45.0%
TCTACTCTAGCATAGAGCAC+AGG - chr4_1:62333257-62333276 Msa0562430:CDS 45.0%
CTACTCTAGCATAGAGCACA+GGG - chr4_1:62333258-62333277 Msa0562430:CDS 45.0%
!! ATCAAATTAATTTATATAAT+AGG + chr4_1:62332873-62332892 None:intergenic 5.0%
!! ATCAAATTAATTTATATAAT+AGG + chr4_1:62332873-62332892 None:intergenic 5.0%
CAACATGGCATCATCTCAGG+TGG - chr4_1:62331523-62331542 Msa0562430:CDS 50.0%
GCGTATGTGAAGGGATACCT+TGG - chr4_1:62332435-62332454 Msa0562430:CDS 50.0%
GCATCTGGAAGAAAGGTCAC+AGG + chr4_1:62332721-62332740 None:intergenic 50.0%
AGCACGTGGTGTATTGAACC+AGG - chr4_1:62332837-62332856 Msa0562430:CDS 50.0%
CAACATGGCATCATCTCAGG+TGG - chr4_1:62331523-62331542 Msa0562430:CDS 50.0%
GCGTATGTGAAGGGATACCT+TGG - chr4_1:62332435-62332454 Msa0562430:CDS 50.0%
GCATCTGGAAGAAAGGTCAC+AGG + chr4_1:62332721-62332740 None:intergenic 50.0%
AGCACGTGGTGTATTGAACC+AGG - chr4_1:62332837-62332856 Msa0562430:CDS 50.0%
GGCATCAACCCTCACTCAGA+CGG - chr4_1:62332622-62332641 Msa0562430:intron 55.0%
AACCCTCACTCAGACGGTTC+CGG - chr4_1:62332628-62332647 Msa0562430:intron 55.0%
GGCATCAACCCTCACTCAGA+CGG - chr4_1:62332622-62332641 Msa0562430:intron 55.0%
AACCCTCACTCAGACGGTTC+CGG - chr4_1:62332628-62332647 Msa0562430:intron 55.0%
CTATCCGCCATGTCCGCAAC+CGG - chr4_1:62332588-62332607 Msa0562430:intron 60.0%
TTGATGCCGTCCACGAGCTC+CGG + chr4_1:62332610-62332629 None:intergenic 60.0%
TGCCGGAACCGTCTGAGTGA+GGG + chr4_1:62332633-62332652 None:intergenic 60.0%
ATGCCGGAACCGTCTGAGTG+AGG + chr4_1:62332634-62332653 None:intergenic 60.0%
CTATCCGCCATGTCCGCAAC+CGG - chr4_1:62332588-62332607 Msa0562430:intron 60.0%
TTGATGCCGTCCACGAGCTC+CGG + chr4_1:62332610-62332629 None:intergenic 60.0%
TGCCGGAACCGTCTGAGTGA+GGG + chr4_1:62332633-62332652 None:intergenic 60.0%
ATGCCGGAACCGTCTGAGTG+AGG + chr4_1:62332634-62332653 None:intergenic 60.0%
AGCTCCGGTTGCGGACATGG+CGG + chr4_1:62332595-62332614 None:intergenic 65.0%
ACGAGCTCCGGTTGCGGACA+TGG + chr4_1:62332598-62332617 None:intergenic 65.0%
ATGTCCGCAACCGGAGCTCG+TGG - chr4_1:62332597-62332616 Msa0562430:intron 65.0%
AGCTCCGGTTGCGGACATGG+CGG + chr4_1:62332595-62332614 None:intergenic 65.0%
ACGAGCTCCGGTTGCGGACA+TGG + chr4_1:62332598-62332617 None:intergenic 65.0%
ATGTCCGCAACCGGAGCTCG+TGG - chr4_1:62332597-62332616 Msa0562430:intron 65.0%
CCGTCCACGAGCTCCGGTTG+CGG + chr4_1:62332604-62332623 None:intergenic 70.0%
CCGCAACCGGAGCTCGTGGA+CGG - chr4_1:62332601-62332620 Msa0562430:intron 70.0%
CCGTCCACGAGCTCCGGTTG+CGG + chr4_1:62332604-62332623 None:intergenic 70.0%
CCGCAACCGGAGCTCGTGGA+CGG - chr4_1:62332601-62332620 Msa0562430:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 62331508 62333483 62331508 ID=Msa0562430;Name=Msa0562430
chr4_1 mRNA 62331508 62333483 62331508 ID=Msa0562430-mRNA-1;Parent=Msa0562430;Name=Msa0562430-mRNA-1;_AED=0.30;_eAED=0.30;_QI=19|1|0.5|1|1|1|4|0|355
chr4_1 exon 62331508 62331750 62331508 ID=Msa0562430-mRNA-1:exon:19702;Parent=Msa0562430-mRNA-1
chr4_1 exon 62332220 62332544 62332220 ID=Msa0562430-mRNA-1:exon:19701;Parent=Msa0562430-mRNA-1
chr4_1 exon 62332722 62332966 62332722 ID=Msa0562430-mRNA-1:exon:19700;Parent=Msa0562430-mRNA-1
chr4_1 exon 62333210 62333483 62333210 ID=Msa0562430-mRNA-1:exon:19699;Parent=Msa0562430-mRNA-1
chr4_1 five_prime_UTR 62333465 62333483 62333465 ID=Msa0562430-mRNA-1:five_prime_utr;Parent=Msa0562430-mRNA-1
chr4_1 CDS 62333210 62333464 62333210 ID=Msa0562430-mRNA-1:cds;Parent=Msa0562430-mRNA-1
chr4_1 CDS 62332722 62332966 62332722 ID=Msa0562430-mRNA-1:cds;Parent=Msa0562430-mRNA-1
chr4_1 CDS 62332220 62332544 62332220 ID=Msa0562430-mRNA-1:cds;Parent=Msa0562430-mRNA-1
chr4_1 CDS 62331508 62331750 62331508 ID=Msa0562430-mRNA-1:cds;Parent=Msa0562430-mRNA-1
Gene Sequence

>Msa0562430

ATGGCATCATCTCAGGTGGCTAATATCTTTGAGAGCACTCATTCAATTCTTGGTGTTATGGATGAAGTGATTAATAAACCCGAAATGGGAATACCAAAAATGTTTCTTCGCCCAGATAAAGAACCCTCAATCCTAACAAATGAAATCAATCCCTTGCAATCAATTCCCGTTTTTGACTTTCAAACCTTGATATGTGGTGACAATACTGAACTTGACAAGTTATTCTCAGCATGCAAAGATTGGGGTTTCTTCCAGGTGGTGAATCACGGTATTAGCTCTGAATTGCTTGAGAAGCTGAAATTTGAGATTCCAAATTTTTTCAAGCTTCCTGTTGAAGAGAAAACAAAATACAAAATAAGACAAGGAGATTTTCAAGGTTATGGAGCTGTCATTAGATGTGAAGGTCAAAAACTTGATTGGGGTGACAGATTCTTCATGATTACAAATCCAATTGCAAGAAGAAAGCCACATCTTTTTCCTCAACTCCCATCATCACTAAGGGATACCTTGGAGTCATATATCTTAGAATTGAAGAAACTTGGCATGACACTTTTTGAATTATTGGGAAAAGCCATAAAGATGGATACGAAGGAAATAGAGAATATGTTTGATGATGGAAATCAATCAATAAGGATGACATACTATCCGCCATGTCCGCAACCGGAGCTCGTGGACGGCATCAACCCTCACTCAGACGGTTCCGGCATAACCATCCTTAATCAGCTTAATGGAGTTGAAGGACTAGAGATTAAGAAAGATGGAGTTTGGATTCCTGTGACCTTTCTTCCAGATGCTTTTGTAGTTAATATTGGAGACATCATGGAGATTCTAAGCAATGGGGTCTACTCTAGCATAGAGCACAGGGTTTCAGTAAACAAAGAAAAGGAGAGAGTTTCTGTTGCTATGTTCTTCAACACCAAATTTGAAGCAGAAATTGGACCAGCAAAGAGTTTGATAAGTTCTGAAAATCCACCTTTGTTCAAAAGCATGTTGATGGAAGAATACTCCAAATACTTTTTTTCAAGAAATCTAAATGGGAAGACAAACTTGGAGAGAATGAGGATTTAA
Protein sequence

>Msa0562430

MASSQVANIFESTHSILGVMDEVINKPEMGIPKMFLRPDKEPSILTNEINPLQSIPVFDFQTLICGDNTELDKLFSACKDWGFFQVVNHGISSELLEKLKFEIPNFFKLPVEEKTKYKIRQGDFQGYGAVIRCEGQKLDWGDRFFMITNPIARRKPHLFPQLPSSLRDTLESYILELKKLGMTLFELLGKAIKMDTKEIENMFDDGNQSIRMTYYPPCPQPELVDGINPHSDGSGITILNQLNGVEGLEIKKDGVWIPVTFLPDAFVVNIGDIMEILSNGVYSSIEHRVSVNKEKERVSVAMFFNTKFEAEIGPAKSLISSENPPLFKSMLMEEYSKYFFSRNLNGKTNLERMRI*