AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0699640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0699640 MtrunA17_Chr8g0375701 97.183 355 10 0 1 355 1 355 0.0 712
Msa0699640 MtrunA17_Chr2g0314401 53.333 315 144 2 44 355 40 354 4.50e-121 353
Msa0699640 MtrunA17_Chr8g0375671 47.727 352 178 3 9 355 7 357 7.90e-121 353
Msa0699640 MtrunA17_Chr5g0420941 49.387 326 163 2 31 355 22 346 2.42e-118 346
Msa0699640 MtrunA17_Chr5g0423191 46.802 344 181 2 13 355 6 348 9.15e-118 345
Msa0699640 MtrunA17_Chr5g0421041 47.965 344 175 3 13 355 6 346 1.75e-116 341
Msa0699640 MtrunA17_Chr5g0423251 47.774 337 174 2 20 355 13 348 7.38e-116 340
Msa0699640 MtrunA17_Chr5g0421091 48.012 327 167 3 31 355 22 347 1.51e-115 339
Msa0699640 MtrunA17_Chr5g0420901 48.160 326 167 2 31 355 23 347 1.93e-114 336
Msa0699640 MtrunA17_Chr8g0365241 45.507 345 185 3 13 355 16 359 4.34e-114 335
Msa0699640 MtrunA17_Chr5g0420981 45.858 338 181 2 20 355 18 355 2.76e-113 333
Msa0699640 MtrunA17_Chr5g0423211 48.328 329 164 4 31 355 24 350 1.44e-112 331
Msa0699640 MtrunA17_Chr2g0314381 50.915 328 157 3 31 355 54 380 1.75e-112 332
Msa0699640 MtrunA17_Chr2g0314391 50.305 328 159 3 31 355 47 373 2.41e-112 332
Msa0699640 MtrunA17_Chr5g0420951 43.417 357 198 3 1 355 1 355 3.30e-112 331
Msa0699640 MtrunA17_Chr5g0423221 44.675 338 184 3 20 355 37 373 1.41e-109 325
Msa0699640 MtrunA17_Chr5g0421101 44.669 347 190 2 10 355 3 348 2.17e-109 323
Msa0699640 MtrunA17_Chr5g0421011 45.640 344 185 2 13 355 6 348 3.91e-108 320
Msa0699640 MtrunA17_Chr5g0423201 45.115 348 188 3 10 355 3 349 4.18e-108 320
Msa0699640 MtrunA17_Chr8g0375601 44.160 351 190 3 11 355 2 352 3.32e-107 318
Msa0699640 MtrunA17_Chr8g0375571 45.455 330 174 3 31 355 22 350 2.20e-105 313
Msa0699640 MtrunA17_Chr8g0375681 52.399 271 128 1 86 355 15 285 3.50e-102 303
Msa0699640 MtrunA17_Chr1g0162191 45.031 322 172 4 31 348 23 343 1.26e-95 288
Msa0699640 MtrunA17_Chr5g0420721 52.227 247 117 1 110 355 4 250 1.01e-87 265
Msa0699640 MtrunA17_Chr7g0239821 38.576 337 206 1 20 355 29 365 9.20e-87 266
Msa0699640 MtrunA17_Chr2g0314371 46.179 301 134 5 31 306 29 326 5.00e-85 260
Msa0699640 MtrunA17_Chr7g0239101 38.000 350 215 2 7 355 8 356 1.96e-83 257
Msa0699640 MtrunA17_Chr2g0296371 39.329 328 189 5 31 351 28 352 1.81e-80 249
Msa0699640 MtrunA17_Chr7g0239121 37.278 338 210 2 20 355 16 353 2.34e-80 249
Msa0699640 MtrunA17_Chr3g0087031 39.067 343 202 5 7 345 12 351 2.23e-78 244
Msa0699640 MtrunA17_Chr7g0239111 36.000 350 222 2 7 355 8 356 3.25e-78 244
Msa0699640 MtrunA17_Chr7g0242551 38.806 335 193 4 31 353 26 360 3.63e-77 241
Msa0699640 MtrunA17_Chr4g0006371 37.209 344 195 5 31 353 25 368 4.94e-73 231
Msa0699640 MtrunA17_Chr5g0437181 35.542 332 207 3 30 354 24 355 1.03e-71 227
Msa0699640 MtrunA17_Chr3g0145171 40.193 311 168 6 55 355 52 354 5.40e-71 225
Msa0699640 MtrunA17_Chr3g0113641 35.843 332 204 4 31 354 26 356 1.99e-70 224
Msa0699640 MtrunA17_Chr7g0239091 33.929 336 213 2 20 355 125 451 3.53e-69 223
Msa0699640 MtrunA17_Chr7g0232161 41.026 273 158 3 20 290 25 296 1.11e-68 218
Msa0699640 MtrunA17_Chr8g0370711 38.835 309 175 5 55 355 52 354 5.96e-67 214
Msa0699640 MtrunA17_Chr7g0239071 38.351 279 170 2 78 355 24 301 7.48e-64 205
Msa0699640 MtrunA17_Chr8g0370721 36.570 309 182 5 55 355 52 354 1.96e-61 200
Msa0699640 MtrunA17_Chr3g0128001 34.259 324 205 6 31 351 15 333 1.23e-60 198
Msa0699640 MtrunA17_Chr4g0064781 36.859 312 187 5 48 355 43 348 3.35e-60 197
Msa0699640 MtrunA17_Chr5g0424201 37.097 310 187 5 31 335 20 326 7.88e-60 196
Msa0699640 MtrunA17_Chr3g0109041 33.033 333 210 6 31 353 21 350 2.57e-59 195
Msa0699640 MtrunA17_Chr2g0311921 33.908 348 204 6 23 355 22 358 1.58e-58 193
Msa0699640 MtrunA17_Chr8g0336781 32.967 364 204 11 11 355 58 400 9.37e-56 187
Msa0699640 MtrunA17_Chr5g0424211 35.314 303 184 7 31 325 18 316 1.27e-55 185
Msa0699640 MtrunA17_Chr2g0311831 32.869 359 212 8 11 355 28 371 8.90e-55 184
Msa0699640 MtrunA17_Chr1g0179801 34.844 353 210 10 18 355 26 373 1.97e-54 183
Msa0699640 MtrunA17_Chr4g0045451 36.552 290 148 6 76 342 54 330 2.46e-54 182
Msa0699640 MtrunA17_Chr7g0265221 33.048 351 201 8 31 355 38 380 4.01e-54 182
Msa0699640 MtrunA17_Chr2g0311761 32.312 359 215 6 11 355 28 372 1.92e-53 180
Msa0699640 MtrunA17_Chr6g0472861 33.611 360 208 12 10 350 21 368 3.23e-53 179
Msa0699640 MtrunA17_Chr5g0420881 52.778 144 68 0 212 355 1 144 3.74e-53 172
Msa0699640 MtrunA17_Chr8g0336851 31.129 363 211 10 11 355 23 364 3.97e-53 179
Msa0699640 MtrunA17_Chr8g0336861 33.148 359 211 11 11 355 23 366 4.45e-53 179
Msa0699640 MtrunA17_Chr5g0426891 34.251 327 187 9 43 355 30 342 5.74e-53 178
Msa0699640 MtrunA17_Chr3g0145181 36.940 268 158 3 70 330 68 331 9.00e-53 178
Msa0699640 MtrunA17_Chr1g0162361 32.710 321 192 9 52 355 24 337 1.21e-52 177
Msa0699640 MtrunA17_Chr8g0345831 32.012 328 218 5 31 355 18 343 1.41e-52 177
Msa0699640 MtrunA17_Chr3g0125201 34.694 294 173 5 54 340 2 283 1.91e-52 176
Msa0699640 MtrunA17_Chr8g0348081 31.405 363 210 10 11 355 23 364 2.68e-52 177
Msa0699640 MtrunA17_Chr3g0114861 35.357 280 175 4 68 342 50 328 2.81e-52 176
Msa0699640 MtrunA17_Chr8g0336761 31.373 357 218 9 11 355 23 364 2.98e-52 177
Msa0699640 MtrunA17_Chr4g0045441 35.254 295 168 8 76 355 54 340 1.26e-51 175
Msa0699640 MtrunA17_Chr8g0336751 30.245 367 227 8 3 355 46 397 1.34e-51 176
Msa0699640 MtrunA17_Chr4g0045471 32.622 328 191 10 53 355 24 346 2.21e-51 174
Msa0699640 MtrunA17_Chr1g0187821 31.421 366 227 10 3 355 16 370 3.09e-51 174
Msa0699640 MtrunA17_Chr5g0398291 35.463 313 184 8 31 327 19 329 4.47e-51 174
Msa0699640 MtrunA17_Chr1g0187831 29.586 338 217 8 31 354 43 373 5.81e-51 174
Msa0699640 MtrunA17_Chr1g0162351 30.233 344 206 10 38 355 55 390 9.23e-51 174
Msa0699640 MtrunA17_Chr4g0055591 30.874 366 228 10 1 355 10 361 1.65e-50 172
Msa0699640 MtrunA17_Chr1g0162321 30.233 344 206 10 38 355 55 390 2.19e-50 173
Msa0699640 MtrunA17_Chr1g0187811 30.029 343 215 7 31 355 158 493 9.73e-50 173
Msa0699640 MtrunA17_Chr7g0266651 30.056 356 226 9 11 355 19 362 1.62e-49 170
Msa0699640 MtrunA17_Chr4g0050031 32.927 328 204 8 38 355 45 366 1.85e-49 169
Msa0699640 MtrunA17_Chr8g0354261 32.603 365 208 12 11 355 28 374 2.11e-49 170
Msa0699640 MtrunA17_Chr2g0332191 32.919 322 195 10 31 339 28 341 2.66e-49 169
Msa0699640 MtrunA17_Chr2g0311701 31.507 365 214 9 4 348 21 369 4.60e-49 169
Msa0699640 MtrunA17_Chr3g0145201 36.940 268 158 3 70 330 703 966 6.20e-49 176
Msa0699640 MtrunA17_Chr2g0311691 32.578 353 206 9 4 338 15 353 7.00e-49 168
Msa0699640 MtrunA17_Chr2g0311861 31.339 351 208 9 11 355 24 347 7.22e-49 167
Msa0699640 MtrunA17_Chr7g0265351 35.669 314 178 11 53 355 37 337 7.67e-49 167
Msa0699640 MtrunA17_Chr6g0455481 33.333 318 199 7 31 342 19 329 1.66e-48 166
Msa0699640 MtrunA17_Chr5g0412651 32.609 322 200 7 32 342 17 332 2.24e-48 166
Msa0699640 MtrunA17_Chr8g0336631 31.006 358 219 9 11 355 23 365 2.97e-48 166
Msa0699640 MtrunA17_Chr8g0354241 31.198 359 221 10 11 355 28 374 6.41e-48 166
Msa0699640 MtrunA17_Chr4g0045411 29.814 322 202 8 53 355 28 344 8.29e-48 165
Msa0699640 MtrunA17_Chr1g0184121 33.003 303 181 9 53 343 35 327 8.77e-48 164
Msa0699640 MtrunA17_Chr2g0311681 31.143 350 215 8 4 338 15 353 2.80e-47 164
Msa0699640 MtrunA17_Chr3g0093761 35.505 307 187 9 53 355 54 353 6.62e-47 162
Msa0699640 MtrunA17_Chr2g0311711 31.755 359 210 10 4 344 19 360 8.30e-47 162
Msa0699640 MtrunA17_Chr1g0184111 31.803 305 186 9 53 345 35 329 1.18e-46 162
Msa0699640 MtrunA17_Chr2g0289341 30.492 305 193 6 52 347 1 295 2.19e-46 160
Msa0699640 MtrunA17_Chr1g0184161 31.741 293 193 6 54 342 37 326 2.88e-46 160
Msa0699640 MtrunA17_Chr3g0130391 30.938 320 205 5 13 320 27 342 3.39e-46 161
Msa0699640 MtrunA17_Chr8g0351101 33.654 312 184 7 31 327 33 336 4.34e-46 161
Msa0699640 MtrunA17_Chr7g0235951 28.415 366 235 8 4 355 21 373 6.02e-46 160
Msa0699640 MtrunA17_Chr3g0093751 35.350 314 179 11 53 355 54 354 1.27e-45 159
Msa0699640 MtrunA17_Chr4g0045431 32.817 323 184 10 56 355 33 345 1.62e-45 159
Msa0699640 MtrunA17_Chr2g0311741 32.198 323 193 10 46 355 18 327 2.27e-45 158
Msa0699640 MtrunA17_Chr7g0250511 28.212 358 241 8 5 355 3 351 2.75e-45 158
Msa0699640 MtrunA17_Chr3g0093741 34.076 314 183 10 53 355 54 354 2.79e-45 158
Msa0699640 MtrunA17_Chr3g0126741 32.268 313 190 9 54 354 58 360 4.07e-45 158
Msa0699640 MtrunA17_Chr7g0220011 32.803 314 178 6 53 350 37 333 5.85e-45 157
Msa0699640 MtrunA17_Chr4g0066121 32.558 344 198 13 11 338 23 348 7.04e-45 157
Msa0699640 MtrunA17_Chr1g0161041 31.686 344 219 8 11 348 55 388 7.27e-45 158
Msa0699640 MtrunA17_Chr7g0225881 30.220 364 219 10 11 355 23 370 7.32e-45 157
Msa0699640 MtrunA17_Chr8g0375641 46.341 164 82 3 9 167 7 169 1.36e-44 151
Msa0699640 MtrunA17_Chr3g0125421 34.146 328 189 10 31 339 16 335 1.59e-44 156
Msa0699640 MtrunA17_Chr1g0184101 32.831 332 201 10 27 350 15 332 1.77e-44 156
Msa0699640 MtrunA17_Chr8g0371931 32.087 321 204 8 28 337 13 330 3.69e-44 155
Msa0699640 MtrunA17_Chr1g0204181 30.267 337 215 7 19 339 26 358 5.56e-44 155
Msa0699640 MtrunA17_Chr5g0412671 31.373 306 197 5 47 342 30 332 8.14e-44 154
Msa0699640 MtrunA17_Chr1g0167951 31.921 354 219 9 11 355 15 355 8.70e-44 154
Msa0699640 MtrunA17_Chr5g0412681 30.405 296 191 6 54 342 32 319 1.13e-43 154
Msa0699640 MtrunA17_Chr3g0121141 28.571 301 202 6 52 347 1 293 1.15e-43 153
Msa0699640 MtrunA17_Chr1g0167911 31.054 351 213 10 11 348 15 349 1.37e-43 154
Msa0699640 MtrunA17_Chr5g0439011 31.095 283 183 4 71 347 22 298 1.44e-43 153
Msa0699640 MtrunA17_Chr5g0405411 32.381 315 195 9 35 336 20 329 1.64e-43 154
Msa0699640 MtrunA17_Chr1g0184151 30.375 293 197 6 54 342 37 326 4.86e-43 152
Msa0699640 MtrunA17_Chr2g0319491 31.488 289 178 6 53 335 31 305 4.95e-43 152
Msa0699640 MtrunA17_Chr8g0375661 43.949 157 82 3 16 167 14 169 5.27e-43 147
Msa0699640 MtrunA17_Chr7g0220001 31.153 321 201 9 31 342 18 327 5.40e-43 152
Msa0699640 MtrunA17_Chr4g0045461 36.655 281 159 6 76 342 54 329 5.65e-43 152
Msa0699640 MtrunA17_Chr1g0167961 30.791 354 225 8 11 355 30 372 1.02e-42 152
Msa0699640 MtrunA17_Chr3g0102041 30.581 327 212 9 35 354 20 338 1.05e-42 151
Msa0699640 MtrunA17_Chr6g0474391 30.564 337 214 8 19 339 31 363 2.05e-42 151
Msa0699640 MtrunA17_Chr2g0311631 30.278 360 225 12 9 355 15 361 3.70e-42 150
Msa0699640 MtrunA17_Chr1g0191201 31.392 309 195 6 26 322 28 331 3.91e-42 150
Msa0699640 MtrunA17_Chr8g0371921 32.601 273 176 4 72 337 59 330 4.42e-42 150
Msa0699640 MtrunA17_Chr6g0488511 34.520 281 162 7 54 323 2 271 1.34e-41 147
Msa0699640 MtrunA17_Chr8g0364471 27.479 353 233 8 11 351 28 369 4.26e-41 147
Msa0699640 MtrunA17_Chr7g0236011 28.767 365 235 10 4 355 21 373 5.36e-41 147
Msa0699640 MtrunA17_Chr1g0161111 31.232 349 224 9 11 352 91 430 6.98e-41 148
Msa0699640 MtrunA17_Chr8g0335411 29.301 372 224 13 4 355 21 373 1.54e-40 146
Msa0699640 MtrunA17_Chr4g0066991 29.582 311 187 6 54 355 66 353 2.50e-40 145
Msa0699640 MtrunA17_Chr1g0161081 30.321 343 225 8 11 348 32 365 2.96e-40 145
Msa0699640 MtrunA17_Chr7g0247991 30.352 369 224 11 4 355 21 373 9.38e-40 144
Msa0699640 MtrunA17_Chr1g0184241 27.424 361 240 8 3 355 21 367 1.80e-38 140
Msa0699640 MtrunA17_Chr2g0285931 29.904 311 193 8 49 344 22 322 1.40e-37 137
Msa0699640 MtrunA17_Chr1g0167931 28.205 351 199 9 11 355 15 318 1.45e-36 134
Msa0699640 MtrunA17_Chr1g0148771 29.642 307 202 8 47 350 55 350 4.80e-36 134
Msa0699640 MtrunA17_Chr3g0105281 31.365 271 164 7 41 303 23 279 7.84e-36 132
Msa0699640 MtrunA17_Chr3g0114871 33.716 261 163 7 31 285 18 274 4.31e-35 129
Msa0699640 MtrunA17_Chr8g0384461 26.377 345 236 6 6 338 1 339 6.54e-35 131
Msa0699640 MtrunA17_Chr5g0420891 44.203 138 75 2 31 167 23 159 8.68e-35 125
Msa0699640 MtrunA17_Chr7g0235981 31.884 276 172 7 89 355 59 327 8.96e-35 130
Msa0699640 MtrunA17_Chr1g0170631 32.292 192 125 3 167 355 3 192 1.80e-34 125
Msa0699640 MtrunA17_Chr4g0068891 28.963 328 204 13 42 354 6 319 1.85e-32 123
Msa0699640 MtrunA17_Chr1g0194321 28.395 324 198 12 55 355 20 332 1.85e-32 124
Msa0699640 MtrunA17_Chr8g0358941 29.392 296 186 8 77 354 44 334 9.88e-32 122
Msa0699640 MtrunA17_Chr8g0336801 37.931 145 86 2 214 355 13 156 3.95e-31 115
Msa0699640 MtrunA17_Chr8g0384481 28.829 333 213 9 21 337 28 352 9.31e-30 117
Msa0699640 MtrunA17_Chr4g0064771 37.349 166 99 2 168 330 27 190 2.52e-29 112
Msa0699640 MtrunA17_Chr2g0313111 28.621 290 191 7 74 353 42 325 4.57e-29 114
Msa0699640 MtrunA17_Chr4g0011311 29.181 281 180 10 3 276 20 288 1.71e-28 112
Msa0699640 MtrunA17_Chr4g0052251 26.855 283 192 7 74 344 43 322 7.50e-28 111
Msa0699640 MtrunA17_Chr4g0053251 29.043 303 175 9 52 323 5 298 1.19e-27 110
Msa0699640 MtrunA17_Chr3g0126761 40.559 143 83 2 212 354 91 231 1.20e-27 108
Msa0699640 MtrunA17_Chr8g0375581 52.326 86 41 0 188 273 1 86 2.05e-27 103
Msa0699640 MtrunA17_Chr4g0075471 35.461 141 89 1 205 343 22 162 3.64e-27 105
Msa0699640 MtrunA17_Chr4g0055911 29.431 299 187 11 54 335 8 299 1.12e-26 108
Msa0699640 MtrunA17_Chr7g0256741 30.032 313 201 7 53 355 8 312 3.50e-26 106
Msa0699640 MtrunA17_Chr8g0336871 32.961 179 110 3 180 355 3 174 6.18e-26 102
Msa0699640 MtrunA17_Chr3g0092531 27.675 271 184 8 71 337 27 289 7.92e-25 102
Msa0699640 MtrunA17_Chr5g0394071 39.062 128 71 2 210 337 45 165 2.06e-24 98.6
Msa0699640 MtrunA17_Chr7g0233661 39.844 128 70 2 210 337 19 139 3.29e-24 97.1
Msa0699640 MtrunA17_Chr6g0486831 29.795 292 178 9 68 335 32 320 4.51e-24 101
Msa0699640 MtrunA17_Chr8g0389941 29.508 305 165 14 71 342 48 335 7.89e-24 100
Msa0699640 MtrunA17_Chr5g0407781 23.529 306 220 6 53 355 3 297 8.08e-23 97.1
Msa0699640 MtrunA17_Chr8g0375591 38.053 113 66 1 20 128 11 123 1.06e-22 92.4
Msa0699640 MtrunA17_Chr4g0055871 30.249 281 159 12 77 335 29 294 1.48e-22 96.3
Msa0699640 MtrunA17_Chr4g0037611 34.356 163 96 4 174 335 1 153 2.30e-22 92.8
Msa0699640 MtrunA17_Chr8g0348951 26.667 315 206 10 51 353 6 307 2.37e-22 95.9
Msa0699640 MtrunA17_Chr8g0362741 29.520 271 161 10 11 276 28 273 2.42e-22 95.1
Msa0699640 MtrunA17_Chr2g0314361 50.633 79 39 0 277 355 1 79 5.79e-22 88.6
Msa0699640 MtrunA17_Chr2g0293931 32.086 187 115 6 169 344 9 194 7.82e-22 92.0
Msa0699640 MtrunA17_Chr4g0004071 28.094 299 200 7 53 342 7 299 1.43e-20 90.9
Msa0699640 MtrunA17_Chr7g0247741 27.508 309 195 11 45 338 1 295 6.25e-19 86.3
Msa0699640 MtrunA17_Chr3g0138351 28.674 279 181 9 73 341 33 303 6.36e-19 86.3
Msa0699640 MtrunA17_Chr5g0407731 25.581 301 208 7 55 351 33 321 9.44e-19 85.9
Msa0699640 MtrunA17_Chr8g0336831 29.752 242 130 10 11 234 23 242 1.03e-18 84.7
Msa0699640 MtrunA17_Chr1g0158011 29.442 197 132 5 164 355 67 261 9.68e-18 82.0
Msa0699640 MtrunA17_Chr4g0009541 25.166 302 202 10 55 340 7 300 1.18e-17 82.4
Msa0699640 MtrunA17_Chr4g0004061 26.885 305 203 9 49 341 3 299 1.51e-17 82.4
Msa0699640 MtrunA17_Chr2g0319521 36.364 110 69 1 167 276 16 124 2.25e-16 75.1
Msa0699640 MtrunA17_Chr8g0375621 55.556 54 24 0 190 243 3 56 3.49e-15 69.3
Msa0699640 MtrunA17_Chr5g0420731 40.506 79 46 1 13 91 6 83 3.59e-15 70.9
Msa0699640 MtrunA17_Chr4g0009561 26.154 325 195 12 55 353 7 312 2.41e-14 73.2
Msa0699640 MtrunA17_Chr8g0364171 34.746 118 64 4 165 276 16 126 5.34e-14 68.6
Msa0699640 MtrunA17_Chr7g0219991 36.364 99 62 1 173 271 254 351 2.20e-13 70.5
Msa0699640 MtrunA17_Chr3g0092581 33.871 124 79 3 215 337 40 161 1.11e-12 65.9
Msa0699640 MtrunA17_Chr2g0311611 38.889 72 36 2 212 276 1 71 8.37e-12 60.5
Msa0699640 MtrunA17_Chr8g0336841 34.940 83 51 1 276 355 9 91 1.13e-11 60.5
Msa0699640 MtrunA17_Chr7g0235991 30.579 121 78 2 77 195 46 162 1.26e-11 63.2
Msa0699640 MtrunA17_Chr1g0158031 27.473 182 127 3 177 355 1 180 1.34e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0699640 AT1G78550.1 49.706 340 168 2 19 355 17 356 1.09e-113 335
Msa0699640 AT1G17020.1 47.965 344 172 4 18 355 16 358 1.02e-112 332
Msa0699640 AT4G25310.1 54.167 288 127 3 70 355 69 353 7.06e-106 315
Msa0699640 AT4G25300.1 46.364 330 171 4 31 355 28 356 9.01e-104 309
Msa0699640 AT1G17010.1 46.064 343 180 4 18 355 16 358 1.51e-103 309
Msa0699640 AT1G78550.2 52.555 274 129 1 83 355 5 278 8.75e-99 294
Msa0699640 AT4G25310.2 49.477 287 114 4 70 355 69 325 4.27e-86 263
Msa0699640 AT3G21420.1 41.040 346 194 6 20 355 17 362 2.31e-84 260
Msa0699640 AT3G11180.1 39.535 301 179 2 54 351 94 394 1.29e-75 239
Msa0699640 AT5G05600.1 35.976 328 203 3 31 351 38 365 2.71e-73 232
Msa0699640 AT3G11180.2 40.702 285 166 2 54 335 94 378 3.30e-73 233
Msa0699640 AT2G38240.1 35.366 328 206 4 31 353 23 349 2.31e-72 229
Msa0699640 AT3G55970.1 36.499 337 202 7 30 354 24 360 4.20e-70 223
Msa0699640 AT1G49390.1 36.036 333 204 6 30 355 18 348 2.17e-66 213
Msa0699640 AT5G20400.1 35.362 345 211 7 19 355 8 348 2.42e-66 213
Msa0699640 AT5G54000.2 37.742 310 186 4 51 355 42 349 6.82e-66 212
Msa0699640 AT5G20550.1 36.176 340 192 9 19 341 8 339 4.04e-62 202
Msa0699640 AT5G54000.1 38.007 271 164 3 87 355 1 269 3.74e-59 192
Msa0699640 AT1G49390.2 36.531 271 168 3 87 355 1 269 5.69e-59 192
Msa0699640 AT4G16330.2 34.967 306 184 6 54 353 66 362 7.78e-59 194
Msa0699640 AT4G25300.2 49.474 190 95 1 167 355 73 262 1.34e-58 191
Msa0699640 AT1G06640.1 32.267 375 214 12 3 355 13 369 3.63e-55 185
Msa0699640 AT3G19000.1 35.393 356 194 12 17 351 1 341 3.88e-55 184
Msa0699640 AT3G19010.1 33.856 319 189 7 50 351 23 336 5.25e-54 181
Msa0699640 AT3G19010.4 33.856 319 189 7 50 351 23 336 5.25e-54 181
Msa0699640 AT3G13610.1 32.796 372 218 13 1 355 5 361 9.39e-54 181
Msa0699640 AT5G59540.1 32.320 362 213 11 11 355 20 366 1.01e-53 181
Msa0699640 AT1G06650.2 31.183 372 222 13 3 355 13 369 1.87e-53 181
Msa0699640 AT5G24530.1 32.416 327 210 7 31 351 15 336 2.40e-53 179
Msa0699640 AT5G08640.2 35.463 313 192 6 30 336 18 326 2.96e-53 179
Msa0699640 AT5G08640.1 35.463 313 192 6 30 336 18 326 2.96e-53 179
Msa0699640 AT1G06620.1 31.319 364 211 8 11 355 22 365 3.07e-52 177
Msa0699640 AT1G55290.1 34.226 336 199 11 31 355 37 361 4.07e-52 177
Msa0699640 AT5G59530.1 32.782 363 199 12 16 355 24 364 1.28e-51 176
Msa0699640 AT1G04380.1 32.588 313 189 5 54 355 44 345 1.36e-51 175
Msa0699640 AT1G77330.1 36.823 277 147 7 54 315 2 265 2.39e-51 173
Msa0699640 AT1G04350.1 30.939 362 215 9 11 355 17 360 2.05e-50 172
Msa0699640 AT2G36690.2 32.353 340 207 9 31 355 32 363 3.97e-50 172
Msa0699640 AT2G36690.1 32.353 340 207 9 31 355 32 363 3.97e-50 172
Msa0699640 AT4G22880.1 33.962 318 187 9 29 327 16 329 5.24e-50 171
Msa0699640 AT4G22880.2 33.962 318 187 9 29 327 16 329 5.24e-50 171
Msa0699640 AT4G22880.3 33.962 318 187 9 29 327 16 329 5.24e-50 171
Msa0699640 AT4G10500.1 31.118 331 220 7 29 354 18 345 9.17e-50 170
Msa0699640 AT5G43440.1 32.797 311 194 7 54 355 61 365 2.37e-49 169
Msa0699640 AT4G10490.1 29.787 329 224 6 31 354 18 344 3.41e-48 166
Msa0699640 AT1G06645.1 28.962 366 235 9 3 355 26 379 3.88e-48 167
Msa0699640 AT1G03410.2 32.055 365 226 10 3 355 7 361 4.66e-48 166
Msa0699640 AT1G03410.1 32.055 365 226 10 3 355 44 398 8.85e-48 166
Msa0699640 AT3G55970.2 36.680 259 152 7 30 276 24 282 9.46e-48 164
Msa0699640 AT5G43450.1 30.447 358 212 11 16 355 24 362 3.15e-47 164
Msa0699640 AT4G16330.1 35.686 255 153 5 105 353 7 256 3.28e-47 161
Msa0699640 AT1G03400.1 31.638 354 215 9 3 346 7 343 4.98e-47 163
Msa0699640 AT5G05600.2 33.202 253 162 3 31 276 38 290 6.15e-47 161
Msa0699640 AT2G30830.1 31.680 363 200 12 16 355 21 358 6.26e-47 163
Msa0699640 AT3G61400.1 31.367 373 220 14 4 355 13 370 2.34e-46 162
Msa0699640 AT3G19010.3 32.288 319 164 8 50 351 23 306 7.88e-46 159
Msa0699640 AT4G25420.1 32.432 333 205 10 28 345 37 364 2.54e-45 159
Msa0699640 AT5G07200.1 30.564 337 211 8 22 339 28 360 3.28e-45 159
Msa0699640 AT1G12010.1 29.054 296 198 5 56 347 8 295 5.77e-45 157
Msa0699640 AT1G05010.1 31.494 308 190 7 52 347 1 299 7.58e-45 157
Msa0699640 AT2G30840.1 29.412 374 224 12 3 355 8 362 1.83e-44 157
Msa0699640 AT3G60290.1 29.787 329 207 9 37 354 38 353 3.96e-44 155
Msa0699640 AT2G19590.1 35.897 273 156 7 55 319 11 272 1.63e-43 153
Msa0699640 AT1G15550.1 32.721 272 172 7 72 335 69 337 1.72e-43 154
Msa0699640 AT4G21200.1 32.997 297 184 6 55 344 42 330 3.50e-43 152
Msa0699640 AT2G44800.1 28.704 324 219 7 30 344 23 343 1.64e-42 151
Msa0699640 AT1G62380.1 29.167 288 192 5 56 339 8 287 1.77e-42 150
Msa0699640 AT1G60980.1 30.028 353 217 9 9 345 23 361 4.48e-42 150
Msa0699640 AT3G51240.1 32.364 275 181 4 73 344 59 331 1.82e-41 149
Msa0699640 AT1G03400.2 29.319 382 215 10 3 346 7 371 4.00e-41 148
Msa0699640 AT2G30840.3 29.144 374 219 13 3 355 8 356 4.90e-41 147
Msa0699640 AT3G12900.1 30.395 329 218 7 31 354 33 355 3.38e-40 145
Msa0699640 AT5G63590.1 33.904 292 174 9 55 335 14 297 5.83e-40 143
Msa0699640 AT5G51810.1 31.790 324 198 10 31 339 42 357 9.45e-40 144
Msa0699640 AT1G80340.1 32.210 267 170 7 77 335 67 330 1.68e-39 143
Msa0699640 AT1G78440.1 31.148 305 186 9 55 345 18 312 4.18e-39 142
Msa0699640 AT5G07480.1 30.312 320 195 11 55 355 44 354 4.58e-39 142
Msa0699640 AT1G50960.1 32.197 264 167 4 55 312 40 297 2.84e-38 140
Msa0699640 AT1G80330.1 30.159 315 192 8 35 335 33 333 3.55e-38 140
Msa0699640 AT4G21690.1 31.636 275 172 6 74 335 61 332 1.72e-37 138
Msa0699640 AT3G19000.2 32.384 281 157 11 17 276 1 269 1.96e-37 136
Msa0699640 AT2G19590.2 35.417 240 143 5 84 319 26 257 2.26e-37 136
Msa0699640 AT5G63600.1 29.329 283 192 5 55 335 33 309 8.57e-37 135
Msa0699640 AT5G63600.2 29.577 284 191 6 55 335 33 310 2.48e-36 134
Msa0699640 AT3G49620.1 34.470 264 141 7 73 314 63 316 9.54e-36 133
Msa0699640 AT2G25450.1 27.568 370 233 12 3 355 8 359 2.24e-35 132
Msa0699640 AT3G19010.2 31.837 245 148 6 50 277 23 265 3.30e-35 130
Msa0699640 AT1G44090.1 32.573 307 183 9 31 322 43 340 4.87e-35 132
Msa0699640 AT1G06640.2 31.959 291 162 10 3 275 13 285 5.63e-35 130
Msa0699640 AT1G06640.3 31.849 292 163 10 3 276 13 286 6.16e-35 129
Msa0699640 AT2G34555.1 28.966 290 188 8 55 335 27 307 5.03e-34 128
Msa0699640 AT1G47990.1 28.155 309 192 12 53 344 13 308 2.29e-33 126
Msa0699640 AT1G02400.1 29.487 312 195 12 49 345 18 319 2.40e-33 126
Msa0699640 AT1G06650.1 29.592 294 177 11 3 281 13 291 4.86e-33 125
Msa0699640 AT4G25420.2 32.184 261 160 9 28 276 37 292 5.19e-33 125
Msa0699640 AT1G30040.1 26.733 303 201 9 53 344 29 321 2.57e-32 124
Msa0699640 AT3G51240.2 33.488 215 139 3 105 316 7 220 9.24e-32 120
Msa0699640 AT3G50210.4 30.976 297 165 9 52 314 5 295 1.19e-31 122
Msa0699640 AT3G50210.1 30.976 297 165 9 52 314 5 295 1.19e-31 122
Msa0699640 AT3G50210.3 30.976 297 165 9 52 314 5 295 1.19e-31 122
Msa0699640 AT3G49630.1 30.435 299 165 9 49 314 3 291 1.29e-31 122
Msa0699640 AT1G06620.2 30.526 285 154 8 11 275 22 282 3.28e-31 119
Msa0699640 AT3G49630.3 31.203 266 151 7 71 314 32 287 4.73e-31 120
Msa0699640 AT1G04380.2 31.330 233 141 4 54 278 44 265 1.97e-30 117
Msa0699640 AT5G43440.2 33.333 231 142 6 54 278 61 285 2.26e-30 117
Msa0699640 AT5G12270.1 30.272 294 188 8 73 355 72 359 3.32e-30 119
Msa0699640 AT5G51810.2 31.923 260 158 9 31 279 42 293 3.04e-29 114
Msa0699640 AT5G59540.2 30.357 280 166 10 11 276 20 284 3.05e-29 114
Msa0699640 AT5G07480.2 30.332 211 137 4 153 355 37 245 1.58e-28 111
Msa0699640 AT3G61400.2 30.345 290 171 11 4 276 13 288 1.72e-28 112
Msa0699640 AT5G63595.1 29.151 271 164 7 43 309 13 259 2.65e-28 112
Msa0699640 AT5G43450.2 29.670 273 158 10 18 275 26 279 2.70e-28 112
Msa0699640 AT5G43935.1 28.667 300 179 9 42 335 12 282 1.32e-27 110
Msa0699640 AT4G23340.1 33.103 290 158 11 77 347 30 302 2.18e-26 107
Msa0699640 AT2G30840.2 27.835 291 173 10 3 275 8 279 2.87e-26 107
Msa0699640 AT3G46500.5 29.032 310 195 11 48 335 2 308 2.15e-25 105
Msa0699640 AT3G47190.1 29.603 277 144 9 55 303 32 285 3.20e-25 104
Msa0699640 AT5G63580.2 28.571 224 152 6 53 272 17 236 8.79e-23 95.9
Msa0699640 AT5G63580.1 28.571 224 152 6 53 272 17 236 1.08e-22 95.9
Msa0699640 AT3G46500.7 29.496 278 171 11 48 303 2 276 5.27e-22 95.1
Msa0699640 AT1G52820.1 29.139 302 194 10 51 341 9 301 8.22e-22 94.7
Msa0699640 AT1G30040.2 27.660 235 149 9 53 276 29 253 4.57e-21 91.7
Msa0699640 AT1G14130.1 26.087 299 199 9 55 345 9 293 3.24e-20 90.1
Msa0699640 AT3G46490.1 27.987 318 199 8 45 335 1 315 5.89e-20 89.7
Msa0699640 AT3G50210.2 33.333 165 104 3 156 314 49 213 7.36e-20 88.2
Msa0699640 AT3G49630.2 32.911 158 103 3 159 314 62 218 1.09e-19 87.8
Msa0699640 AT1G02400.2 27.344 256 166 10 49 292 18 265 1.43e-19 87.4
Msa0699640 AT3G46490.2 28.276 290 178 8 45 307 1 287 9.34e-19 86.3
Msa0699640 AT5G58660.1 25.828 302 168 10 45 303 14 302 2.90e-18 85.1
Msa0699640 AT1G14120.2 26.646 319 192 9 55 355 8 302 3.71e-18 84.3
Msa0699640 AT1G14120.1 26.646 319 192 9 55 355 8 302 3.71e-18 84.3
Msa0699640 AT1G14120.3 26.646 319 192 9 55 355 8 302 3.71e-18 84.3
Msa0699640 AT4G16765.6 31.683 202 123 7 151 340 42 240 4.46e-18 83.2
Msa0699640 AT4G16765.1 31.683 202 123 7 151 340 42 240 4.46e-18 83.2
Msa0699640 AT4G16765.2 31.683 202 123 7 151 340 42 240 4.46e-18 83.2
Msa0699640 AT4G23340.2 35.838 173 98 5 180 347 20 184 8.43e-18 81.3
Msa0699640 AT1G35190.2 31.034 261 127 12 68 303 23 255 2.81e-17 81.6
Msa0699640 AT1G35190.1 30.798 263 148 11 68 303 23 278 2.36e-16 79.3
Msa0699640 AT4G16765.3 31.217 189 115 7 151 327 42 227 2.58e-16 77.8
Msa0699640 AT1G52800.1 27.376 263 165 11 77 328 38 285 8.50e-16 77.8
Msa0699640 AT4G03070.1 27.124 306 187 12 55 339 14 304 1.06e-13 71.6
Msa0699640 AT4G16770.1 29.858 211 127 9 77 269 42 249 2.03e-13 70.1
Msa0699640 AT4G22870.1 42.857 84 47 1 245 327 2 85 2.53e-13 66.2
Msa0699640 AT5G58660.2 25.000 280 153 10 45 282 14 278 4.10e-13 69.3
Msa0699640 AT4G16765.5 35.000 120 71 3 226 340 77 194 1.05e-12 66.6
Msa0699640 AT3G46500.4 27.513 189 124 6 170 350 1 184 1.75e-12 65.9
Msa0699640 AT4G22870.2 40.230 87 48 2 245 327 40 126 9.53e-12 62.8

Find 71 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATTTCTGCTTCAAATT+TGG 0.136100 4_4:+70405030 None:intergenic
TTCCTTCATATCCATCTTTA+TGG 0.137991 4_4:+70405852 None:intergenic
ACCAAATTTGAAGCAGAAAT+TGG 0.176209 4_4:-70405031 Msa0699640:CDS
AGGATTGAGGGTTCTTTATC+TGG 0.179313 4_4:+70406730 None:intergenic
GAGAGCACTCATTCAATTCT+TGG 0.207479 4_4:-70406811 Msa0699640:CDS
ACCATCCTTAATCAGCTTAA+TGG 0.230605 4_4:-70405715 Msa0699640:CDS
CAACTCCATTAAGCTGATTA+AGG 0.246921 4_4:+70405710 None:intergenic
TCATTCAATTCTTGGTGTTA+TGG 0.254788 4_4:-70406803 Msa0699640:CDS
AGATGATGCCATGTTGATTT+TGG 0.256096 4_4:+70406852 None:intergenic
AGATTAAGAAAGATGGAGTT+TGG 0.278559 4_4:-70405678 Msa0699640:CDS
CAAAGATTGGGGTTTCTTCC+AGG 0.305283 4_4:-70406608 Msa0699640:intron
TTTGTTCAAAAGCATGTTGA+TGG 0.327425 4_4:-70404972 Msa0699640:CDS
TGTGGCTTTCTTCTTGCAAT+AGG 0.330734 4_4:+70406153 None:intergenic
GAACTTATCAAACTCTTTGC+TGG 0.345699 4_4:+70405007 None:intergenic
CGTCGACGAGCTCCGGTTGC+GGG 0.349345 4_4:+70405770 None:intergenic
AGGGATTGGTTTCATTTGTT+AGG 0.354880 4_4:+70406710 None:intergenic
AGTGATTAATAAACCCGAAA+TGG 0.356205 4_4:-70406776 Msa0699640:CDS
GTTTCATTTGTTAGGATTGA+GGG 0.372259 4_4:+70406718 None:intergenic
ATGATGGAAATCAATCAATA+AGG 0.373969 4_4:-70405813 Msa0699640:CDS
TATTCTCAGCATGCAAAGAT+TGG 0.378321 4_4:-70406621 Msa0699640:CDS
ATTCTCAGCATGCAAAGATT+GGG 0.402514 4_4:-70406620 Msa0699640:CDS
ACGAGCTCCGGTTGCGGGCA+TGG 0.404443 4_4:+70405775 None:intergenic
GGTTTCATTTGTTAGGATTG+AGG 0.421433 4_4:+70406717 None:intergenic
GGACTAGAGATTAAGAAAGA+TGG 0.432535 4_4:-70405685 Msa0699640:CDS
GGGAATTGATTGCAAGGGAT+TGG 0.443437 4_4:+70406696 None:intergenic
CCGTCGACGAGCTCCGGTTG+CGG 0.448496 4_4:+70405769 None:intergenic
CTATCCGCCATGCCCGCAAC+CGG 0.448538 4_4:-70405782 Msa0699640:CDS
AGTATTGTCACCACATATCA+AGG 0.455503 4_4:+70406657 None:intergenic
AATCAGCTTAATGGAGTTGA+AGG 0.457519 4_4:-70405706 Msa0699640:CDS
GATAAGCACCTTAGTGATGA+TGG 0.459040 4_4:+70406114 None:intergenic
GTGATTAATAAACCCGAAAT+GGG 0.460139 4_4:-70406775 Msa0699640:CDS
ATATTAACTACAAAAGCATC+TGG 0.461880 4_4:+70405637 None:intergenic
ATCTTAGAATTGAAGAAACT+TGG 0.471265 4_4:-70405904 Msa0699640:CDS
AGCCATAAAGATGGATATGA+AGG 0.476955 4_4:-70405854 Msa0699640:CDS
TACAAAAGCATCTGGAAGAA+AGG 0.481736 4_4:+70405645 None:intergenic
TTGATGCCGTCGACGAGCTC+CGG 0.485676 4_4:+70405763 None:intergenic
ATGCCGGAGCCGTCGGAGTG+AGG 0.487266 4_4:+70405739 None:intergenic
GTAGAGAATATGTTTGATGA+TGG 0.488444 4_4:-70405829 Msa0699640:CDS
GGATTGAGGGTTCTTTATCT+GGG 0.495260 4_4:+70406731 None:intergenic
TCTAAATGGGAAGACAAACT+TGG 0.498065 4_4:-70404918 Msa0699640:CDS
AATCAACATGGCATCATCTC+AGG 0.499386 4_4:-70406848 Msa0699640:exon
AACCCTCACTCCGACGGCTC+CGG 0.507522 4_4:-70405742 Msa0699640:CDS
AGTTAATATTGGAGACATCA+TGG 0.510828 4_4:-70405623 Msa0699640:CDS
TGCCGGAGCCGTCGGAGTGA+GGG 0.514870 4_4:+70405740 None:intergenic
GACTTTCAAACCTTGATATG+TGG 0.523264 4_4:-70406667 Msa0699640:CDS
CTGATTAAGGATGGTTATGC+CGG 0.526310 4_4:+70405723 None:intergenic
GGTTTCAGTAAACAAAGAAA+AGG 0.544690 4_4:-70405083 Msa0699640:CDS
ATTGGGAAAAGCCATAAAGA+TGG 0.547819 4_4:-70405863 Msa0699640:CDS
AGACAAACTTGGAGAGAATG+AGG 0.547939 4_4:-70404907 Msa0699640:CDS
GATGGTTATGCCGGAGCCGT+CGG 0.550223 4_4:+70405732 None:intergenic
TCCATTAAGCTGATTAAGGA+TGG 0.551241 4_4:+70405714 None:intergenic
CTCAACTCCCATCATCACTA+AGG 0.551331 4_4:-70406122 Msa0699640:intron
GCATATGTGAAGGGATACCT+TGG 0.558232 4_4:-70405935 Msa0699640:intron
TGTACTCTAGCATAGAGCAC+AGG 0.566887 4_4:-70405105 Msa0699640:CDS
TTCTCAGCATGCAAAGATTG+GGG 0.568244 4_4:-70406619 Msa0699640:CDS
CTTAGTGATGATGGGAGTTG+AGG 0.569423 4_4:+70406123 None:intergenic
CCGCAACCGGAGCTCGTCGA+CGG 0.573036 4_4:-70405769 Msa0699640:CDS
GGAGCTGTCATTAGATGTGA+AGG 0.581827 4_4:-70406219 Msa0699640:CDS
TTCTAAGATATATGACTCCA+AGG 0.586022 4_4:+70405918 None:intergenic
ATAAGCACCTTAGTGATGAT+GGG 0.587837 4_4:+70406115 None:intergenic
TATATGCAGGTGGTGAATCA+CGG 0.608081 4_4:-70406354 Msa0699640:intron
GCATCTGGAAGAAAGGTCAC+AGG 0.608787 4_4:+70405652 None:intergenic
AAAACGGGAATTGATTGCAA+GGG 0.620044 4_4:+70406691 None:intergenic
GGCATCAACCCTCACTCCGA+CGG 0.624424 4_4:-70405748 Msa0699640:CDS
AGCTCCGGTTGCGGGCATGG+CGG 0.627520 4_4:+70405778 None:intergenic
CAACATGGCATCATCTCAGG+TGG 0.641861 4_4:-70406845 Msa0699640:exon
GTACTCTAGCATAGAGCACA+GGG 0.652956 4_4:-70405104 Msa0699640:CDS
ACAAAATACAAAATAAGACA+AGG 0.680547 4_4:-70406258 Msa0699640:CDS
TTTACAGATTCTAAGCAATG+GGG 0.682032 4_4:-70405128 Msa0699640:intron
ATAACAAACCAAAATCAACA+TGG 0.724818 4_4:-70406860 Msa0699640:exon
TAATATTGGAGACATCATGG+AGG 0.754731 4_4:-70405620 Msa0699640:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAATATATATCTTAAAAAT+TGG - chr4_4:70405262-70405281 Msa0699640:intron 10.0%
!!! TTTTGCATTTTTTTTTTTTA+TGG - chr4_4:70405353-70405372 Msa0699640:intron 10.0%
!! ATAATATATAGTATCTAATT+AGG + chr4_4:70405783-70405802 None:intergenic 10.0%
!! TGAATATATATCTTAAAAAT+TGG - chr4_4:70405262-70405281 Msa0699640:intron 10.0%
!!! TTTTGCATTTTTTTTTTTTA+TGG - chr4_4:70405353-70405372 Msa0699640:intron 10.0%
!! ATAATATATAGTATCTAATT+AGG + chr4_4:70405783-70405802 None:intergenic 10.0%
!! AGTTGAATAAAAATTACATA+TGG + chr4_4:70405732-70405751 None:intergenic 15.0%
!! ATTTATATAATAGGTATAGT+AGG + chr4_4:70406255-70406274 None:intergenic 15.0%
!!! TTATCTTTTTGATACAATAA+TGG + chr4_4:70406351-70406370 None:intergenic 15.0%
!!! ATTTCTTGAAAAAAAGTATT+TGG + chr4_4:70406824-70406843 None:intergenic 15.0%
!!! TTTTTTTCAAGAAATCTAAA+TGG - chr4_4:70406829-70406848 Msa0699640:CDS 15.0%
!!! TTTTTTCAAGAAATCTAAAT+GGG - chr4_4:70406830-70406849 Msa0699640:CDS 15.0%
!! AGTTGAATAAAAATTACATA+TGG + chr4_4:70405732-70405751 None:intergenic 15.0%
!! ATTTATATAATAGGTATAGT+AGG + chr4_4:70406255-70406274 None:intergenic 15.0%
!!! TTATCTTTTTGATACAATAA+TGG + chr4_4:70406351-70406370 None:intergenic 15.0%
!!! ATTTCTTGAAAAAAAGTATT+TGG + chr4_4:70406824-70406843 None:intergenic 15.0%
!!! TTTTTTTCAAGAAATCTAAA+TGG - chr4_4:70406829-70406848 Msa0699640:CDS 15.0%
!!! TTTTTTCAAGAAATCTAAAT+GGG - chr4_4:70406830-70406849 Msa0699640:CDS 15.0%
!! ACAAAATACAAAATAAGACA+AGG - chr4_4:70405503-70405522 Msa0699640:intron 20.0%
!!! ATGACACTTTTTGAATTATT+GGG - chr4_4:70405881-70405900 Msa0699640:CDS 20.0%
!!! CAATAAAAAATGTGCTATTT+AGG + chr4_4:70406436-70406455 None:intergenic 20.0%
!!! CTAAATAGCACATTTTTTAT+TGG - chr4_4:70406434-70406453 Msa0699640:intron 20.0%
!! TTAGGGTTTCATTAAAAAAA+TGG - chr4_4:70406517-70406536 Msa0699640:intron 20.0%
!! ACAAAATACAAAATAAGACA+AGG - chr4_4:70405503-70405522 Msa0699640:intron 20.0%
!!! ATGACACTTTTTGAATTATT+GGG - chr4_4:70405881-70405900 Msa0699640:CDS 20.0%
!!! CAATAAAAAATGTGCTATTT+AGG + chr4_4:70406436-70406455 None:intergenic 20.0%
!!! CTAAATAGCACATTTTTTAT+TGG - chr4_4:70406434-70406453 Msa0699640:intron 20.0%
!! TTAGGGTTTCATTAAAAAAA+TGG - chr4_4:70406517-70406536 Msa0699640:intron 20.0%
! ATAACAAACCAAAATCAACA+TGG - chr4_4:70404901-70404920 Msa0699640:CDS 25.0%
! TGAACTCTAATTTATAAACC+TGG + chr4_4:70405174-70405193 None:intergenic 25.0%
! AAATTGATGCAATTATATGC+AGG - chr4_4:70405394-70405413 Msa0699640:intron 25.0%
!!! TATTTTGTTTTCTCTTCAAC+AGG + chr4_4:70405491-70405510 None:intergenic 25.0%
!! ATTTTTGTATGCATATGTGA+AGG - chr4_4:70405816-70405835 Msa0699640:CDS 25.0%
!! TTTTTGTATGCATATGTGAA+GGG - chr4_4:70405817-70405836 Msa0699640:CDS 25.0%
! ATCTTAGAATTGAAGAAACT+TGG - chr4_4:70405857-70405876 Msa0699640:CDS 25.0%
!!! CATGACACTTTTTGAATTAT+TGG - chr4_4:70405880-70405899 Msa0699640:CDS 25.0%
!! ATGATGGAAATCAATCAATA+AGG - chr4_4:70405948-70405967 Msa0699640:intron 25.0%
!!! ATATTAACTACAAAAGCATC+TGG + chr4_4:70406127-70406146 None:intergenic 25.0%
!! GATGCTTTTGTAGTTAATAT+TGG - chr4_4:70406127-70406146 Msa0699640:CDS 25.0%
! TGTAATAATGGCATTATTTG+TGG - chr4_4:70406394-70406413 Msa0699640:intron 25.0%
! CTAAGAAGAGAGTTATTAAA+GGG + chr4_4:70406501-70406520 None:intergenic 25.0%
! CTTTAATAACTCTCTTCTTA+GGG - chr4_4:70406500-70406519 Msa0699640:intron 25.0%
!! ATACCTTTAACTCATGTTTT+GGG - chr4_4:70406606-70406625 Msa0699640:intron 25.0%
!! ATTTTACAGATTCTAAGCAA+TGG - chr4_4:70406631-70406650 Msa0699640:CDS 25.0%
!! TTTTACAGATTCTAAGCAAT+GGG - chr4_4:70406632-70406651 Msa0699640:CDS 25.0%
! ATAACAAACCAAAATCAACA+TGG - chr4_4:70404901-70404920 Msa0699640:CDS 25.0%
! TGAACTCTAATTTATAAACC+TGG + chr4_4:70405174-70405193 None:intergenic 25.0%
! AAATTGATGCAATTATATGC+AGG - chr4_4:70405394-70405413 Msa0699640:intron 25.0%
!!! TATTTTGTTTTCTCTTCAAC+AGG + chr4_4:70405491-70405510 None:intergenic 25.0%
!! ATTTTTGTATGCATATGTGA+AGG - chr4_4:70405816-70405835 Msa0699640:CDS 25.0%
!! TTTTTGTATGCATATGTGAA+GGG - chr4_4:70405817-70405836 Msa0699640:CDS 25.0%
! ATCTTAGAATTGAAGAAACT+TGG - chr4_4:70405857-70405876 Msa0699640:CDS 25.0%
!!! CATGACACTTTTTGAATTAT+TGG - chr4_4:70405880-70405899 Msa0699640:CDS 25.0%
!! ATGATGGAAATCAATCAATA+AGG - chr4_4:70405948-70405967 Msa0699640:intron 25.0%
!!! ATATTAACTACAAAAGCATC+TGG + chr4_4:70406127-70406146 None:intergenic 25.0%
!! GATGCTTTTGTAGTTAATAT+TGG - chr4_4:70406127-70406146 Msa0699640:CDS 25.0%
! TGTAATAATGGCATTATTTG+TGG - chr4_4:70406394-70406413 Msa0699640:intron 25.0%
! CTAAGAAGAGAGTTATTAAA+GGG + chr4_4:70406501-70406520 None:intergenic 25.0%
! CTTTAATAACTCTCTTCTTA+GGG - chr4_4:70406500-70406519 Msa0699640:intron 25.0%
!! ATACCTTTAACTCATGTTTT+GGG - chr4_4:70406606-70406625 Msa0699640:intron 25.0%
!! ATTTTACAGATTCTAAGCAA+TGG - chr4_4:70406631-70406650 Msa0699640:CDS 25.0%
!! TTTTACAGATTCTAAGCAAT+GGG - chr4_4:70406632-70406651 Msa0699640:CDS 25.0%
!! TCATTCAATTCTTGGTGTTA+TGG - chr4_4:70404958-70404977 Msa0699640:CDS 30.0%
AGTGATTAATAAACCCGAAA+TGG - chr4_4:70404985-70405004 Msa0699640:CDS 30.0%
GTGATTAATAAACCCGAAAT+GGG - chr4_4:70404986-70405005 Msa0699640:CDS 30.0%
!!! ATTTTTGGTATTCCCATTTC+GGG + chr4_4:70405001-70405020 None:intergenic 30.0%
!!! CATTTTTGGTATTCCCATTT+CGG + chr4_4:70405002-70405021 None:intergenic 30.0%
! GTTTCATTTGTTAGGATTGA+GGG + chr4_4:70405046-70405065 None:intergenic 30.0%
AAGGTTTGAAAGTCAAAAAC+GGG + chr4_4:70405088-70405107 None:intergenic 30.0%
CAAGGTTTGAAAGTCAAAAA+CGG + chr4_4:70405089-70405108 None:intergenic 30.0%
ACAGGAAGCTTGAAAAAATT+TGG + chr4_4:70405473-70405492 None:intergenic 30.0%
! ATAAGACAAGGAGATTTTCA+AGG - chr4_4:70405515-70405534 Msa0699640:intron 30.0%
TGAAGGTCAAAAACTTGATT+GGG - chr4_4:70405559-70405578 Msa0699640:intron 30.0%
!! TTCTAAGATATATGACTCCA+AGG + chr4_4:70405846-70405865 None:intergenic 30.0%
TTCCTTCATATCCATCTTTA+TGG + chr4_4:70405912-70405931 None:intergenic 30.0%
GTAGAGAATATGTTTGATGA+TGG - chr4_4:70405932-70405951 Msa0699640:intron 30.0%
AGATTAAGAAAGATGGAGTT+TGG - chr4_4:70406083-70406102 Msa0699640:intron 30.0%
AGTTAATATTGGAGACATCA+TGG - chr4_4:70406138-70406157 Msa0699640:CDS 30.0%
! TAGTATTTTCAATGAGTCGT+GGG - chr4_4:70406312-70406331 Msa0699640:CDS 30.0%
TTATTACACCATAACACATG+TGG + chr4_4:70406382-70406401 None:intergenic 30.0%
CATGTGTTATGGTGTAATAA+TGG - chr4_4:70406382-70406401 Msa0699640:intron 30.0%
! CTATTTAGGAGCATATTGAA+TGG + chr4_4:70406422-70406441 None:intergenic 30.0%
CCTAAGAAGAGAGTTATTAA+AGG + chr4_4:70406502-70406521 None:intergenic 30.0%
CCTTTAATAACTCTCTTCTT+AGG - chr4_4:70406499-70406518 Msa0699640:intron 30.0%
! CATACCTTTAACTCATGTTT+TGG - chr4_4:70406605-70406624 Msa0699640:intron 30.0%
TTTACAGATTCTAAGCAATG+GGG - chr4_4:70406633-70406652 Msa0699640:CDS 30.0%
GGTTTCAGTAAACAAAGAAA+AGG - chr4_4:70406678-70406697 Msa0699640:CDS 30.0%
! ACCAAATTTGAAGCAGAAAT+TGG - chr4_4:70406730-70406749 Msa0699640:CDS 30.0%
TCCAATTTCTGCTTCAAATT+TGG + chr4_4:70406734-70406753 None:intergenic 30.0%
! ATCAACATGCTTTTGAACAA+AGG + chr4_4:70406790-70406809 None:intergenic 30.0%
! TTTGTTCAAAAGCATGTTGA+TGG - chr4_4:70406789-70406808 Msa0699640:CDS 30.0%
!! TCATTCAATTCTTGGTGTTA+TGG - chr4_4:70404958-70404977 Msa0699640:CDS 30.0%
AGTGATTAATAAACCCGAAA+TGG - chr4_4:70404985-70405004 Msa0699640:CDS 30.0%
GTGATTAATAAACCCGAAAT+GGG - chr4_4:70404986-70405005 Msa0699640:CDS 30.0%
!!! ATTTTTGGTATTCCCATTTC+GGG + chr4_4:70405001-70405020 None:intergenic 30.0%
!!! CATTTTTGGTATTCCCATTT+CGG + chr4_4:70405002-70405021 None:intergenic 30.0%
! GTTTCATTTGTTAGGATTGA+GGG + chr4_4:70405046-70405065 None:intergenic 30.0%
AAGGTTTGAAAGTCAAAAAC+GGG + chr4_4:70405088-70405107 None:intergenic 30.0%
CAAGGTTTGAAAGTCAAAAA+CGG + chr4_4:70405089-70405108 None:intergenic 30.0%
ACAGGAAGCTTGAAAAAATT+TGG + chr4_4:70405473-70405492 None:intergenic 30.0%
! ATAAGACAAGGAGATTTTCA+AGG - chr4_4:70405515-70405534 Msa0699640:intron 30.0%
TGAAGGTCAAAAACTTGATT+GGG - chr4_4:70405559-70405578 Msa0699640:intron 30.0%
!! TTCTAAGATATATGACTCCA+AGG + chr4_4:70405846-70405865 None:intergenic 30.0%
TTCCTTCATATCCATCTTTA+TGG + chr4_4:70405912-70405931 None:intergenic 30.0%
GTAGAGAATATGTTTGATGA+TGG - chr4_4:70405932-70405951 Msa0699640:intron 30.0%
AGATTAAGAAAGATGGAGTT+TGG - chr4_4:70406083-70406102 Msa0699640:intron 30.0%
AGTTAATATTGGAGACATCA+TGG - chr4_4:70406138-70406157 Msa0699640:CDS 30.0%
! TAGTATTTTCAATGAGTCGT+GGG - chr4_4:70406312-70406331 Msa0699640:CDS 30.0%
TTATTACACCATAACACATG+TGG + chr4_4:70406382-70406401 None:intergenic 30.0%
CATGTGTTATGGTGTAATAA+TGG - chr4_4:70406382-70406401 Msa0699640:intron 30.0%
! CTATTTAGGAGCATATTGAA+TGG + chr4_4:70406422-70406441 None:intergenic 30.0%
CCTAAGAAGAGAGTTATTAA+AGG + chr4_4:70406502-70406521 None:intergenic 30.0%
CCTTTAATAACTCTCTTCTT+AGG - chr4_4:70406499-70406518 Msa0699640:intron 30.0%
! CATACCTTTAACTCATGTTT+TGG - chr4_4:70406605-70406624 Msa0699640:intron 30.0%
TTTACAGATTCTAAGCAATG+GGG - chr4_4:70406633-70406652 Msa0699640:CDS 30.0%
GGTTTCAGTAAACAAAGAAA+AGG - chr4_4:70406678-70406697 Msa0699640:CDS 30.0%
! ACCAAATTTGAAGCAGAAAT+TGG - chr4_4:70406730-70406749 Msa0699640:CDS 30.0%
TCCAATTTCTGCTTCAAATT+TGG + chr4_4:70406734-70406753 None:intergenic 30.0%
! ATCAACATGCTTTTGAACAA+AGG + chr4_4:70406790-70406809 None:intergenic 30.0%
! TTTGTTCAAAAGCATGTTGA+TGG - chr4_4:70406789-70406808 Msa0699640:CDS 30.0%
!!! AGATGATGCCATGTTGATTT+TGG + chr4_4:70404912-70404931 None:intergenic 35.0%
! GGTTTCATTTGTTAGGATTG+AGG + chr4_4:70405047-70405066 None:intergenic 35.0%
!! AGGGATTGGTTTCATTTGTT+AGG + chr4_4:70405054-70405073 None:intergenic 35.0%
AAAACGGGAATTGATTGCAA+GGG + chr4_4:70405073-70405092 None:intergenic 35.0%
AAAAACGGGAATTGATTGCA+AGG + chr4_4:70405074-70405093 None:intergenic 35.0%
GACTTTCAAACCTTGATATG+TGG - chr4_4:70405094-70405113 Msa0699640:CDS 35.0%
AGTATTGTCACCACATATCA+AGG + chr4_4:70405107-70405126 None:intergenic 35.0%
TATTCTCAGCATGCAAAGAT+TGG - chr4_4:70405140-70405159 Msa0699640:intron 35.0%
ATTCTCAGCATGCAAAGATT+GGG - chr4_4:70405141-70405160 Msa0699640:intron 35.0%
TTGATGCAATTATATGCAGG+TGG - chr4_4:70405397-70405416 Msa0699640:intron 35.0%
!! CAAGGAGATTTTCAAGGTTA+TGG - chr4_4:70405521-70405540 Msa0699640:intron 35.0%
GTGAAGGTCAAAAACTTGAT+TGG - chr4_4:70405558-70405577 Msa0699640:intron 35.0%
GAAGGTCAAAAACTTGATTG+GGG - chr4_4:70405560-70405579 Msa0699640:intron 35.0%
ATAAGCACCTTAGTGATGAT+GGG + chr4_4:70405649-70405668 None:intergenic 35.0%
ATTGGGAAAAGCCATAAAGA+TGG - chr4_4:70405898-70405917 Msa0699640:CDS 35.0%
AGCCATAAAGATGGATATGA+AGG - chr4_4:70405907-70405926 Msa0699640:CDS 35.0%
ACCATCCTTAATCAGCTTAA+TGG - chr4_4:70406046-70406065 Msa0699640:intron 35.0%
TCCATTAAGCTGATTAAGGA+TGG + chr4_4:70406050-70406069 None:intergenic 35.0%
CAACTCCATTAAGCTGATTA+AGG + chr4_4:70406054-70406073 None:intergenic 35.0%
AATCAGCTTAATGGAGTTGA+AGG - chr4_4:70406055-70406074 Msa0699640:intron 35.0%
GGACTAGAGATTAAGAAAGA+TGG - chr4_4:70406076-70406095 Msa0699640:intron 35.0%
!! TACAAAAGCATCTGGAAGAA+AGG + chr4_4:70406119-70406138 None:intergenic 35.0%
TAATATTGGAGACATCATGG+AGG - chr4_4:70406141-70406160 Msa0699640:CDS 35.0%
TGACAATGAAATAAAGCACG+TGG - chr4_4:70406214-70406233 Msa0699640:CDS 35.0%
ATAATAGGTATAGTAGGACC+TGG + chr4_4:70406249-70406268 None:intergenic 35.0%
! GTAGTATTTTCAATGAGTCG+TGG - chr4_4:70406311-70406330 Msa0699640:CDS 35.0%
TGCTAAATCCACATGTGTTA+TGG - chr4_4:70406371-70406390 Msa0699640:intron 35.0%
AGAGAGTTATTAAAGGGAAG+AGG + chr4_4:70406495-70406514 None:intergenic 35.0%
TCACCCAAAACATGAGTTAA+AGG + chr4_4:70406612-70406631 None:intergenic 35.0%
GAACTTATCAAACTCTTTGC+TGG + chr4_4:70406757-70406776 None:intergenic 35.0%
! AACATGCTTTTGAACAAAGG+TGG + chr4_4:70406787-70406806 None:intergenic 35.0%
TCTAAATGGGAAGACAAACT+TGG - chr4_4:70406843-70406862 Msa0699640:CDS 35.0%
!!! AGATGATGCCATGTTGATTT+TGG + chr4_4:70404912-70404931 None:intergenic 35.0%
! GGTTTCATTTGTTAGGATTG+AGG + chr4_4:70405047-70405066 None:intergenic 35.0%
!! AGGGATTGGTTTCATTTGTT+AGG + chr4_4:70405054-70405073 None:intergenic 35.0%
AAAACGGGAATTGATTGCAA+GGG + chr4_4:70405073-70405092 None:intergenic 35.0%
AAAAACGGGAATTGATTGCA+AGG + chr4_4:70405074-70405093 None:intergenic 35.0%
GACTTTCAAACCTTGATATG+TGG - chr4_4:70405094-70405113 Msa0699640:CDS 35.0%
AGTATTGTCACCACATATCA+AGG + chr4_4:70405107-70405126 None:intergenic 35.0%
TATTCTCAGCATGCAAAGAT+TGG - chr4_4:70405140-70405159 Msa0699640:intron 35.0%
ATTCTCAGCATGCAAAGATT+GGG - chr4_4:70405141-70405160 Msa0699640:intron 35.0%
TTGATGCAATTATATGCAGG+TGG - chr4_4:70405397-70405416 Msa0699640:intron 35.0%
!! CAAGGAGATTTTCAAGGTTA+TGG - chr4_4:70405521-70405540 Msa0699640:intron 35.0%
GTGAAGGTCAAAAACTTGAT+TGG - chr4_4:70405558-70405577 Msa0699640:intron 35.0%
GAAGGTCAAAAACTTGATTG+GGG - chr4_4:70405560-70405579 Msa0699640:intron 35.0%
ATAAGCACCTTAGTGATGAT+GGG + chr4_4:70405649-70405668 None:intergenic 35.0%
ATTGGGAAAAGCCATAAAGA+TGG - chr4_4:70405898-70405917 Msa0699640:CDS 35.0%
AGCCATAAAGATGGATATGA+AGG - chr4_4:70405907-70405926 Msa0699640:CDS 35.0%
ACCATCCTTAATCAGCTTAA+TGG - chr4_4:70406046-70406065 Msa0699640:intron 35.0%
TCCATTAAGCTGATTAAGGA+TGG + chr4_4:70406050-70406069 None:intergenic 35.0%
CAACTCCATTAAGCTGATTA+AGG + chr4_4:70406054-70406073 None:intergenic 35.0%
AATCAGCTTAATGGAGTTGA+AGG - chr4_4:70406055-70406074 Msa0699640:intron 35.0%
GGACTAGAGATTAAGAAAGA+TGG - chr4_4:70406076-70406095 Msa0699640:intron 35.0%
!! TACAAAAGCATCTGGAAGAA+AGG + chr4_4:70406119-70406138 None:intergenic 35.0%
TAATATTGGAGACATCATGG+AGG - chr4_4:70406141-70406160 Msa0699640:CDS 35.0%
TGACAATGAAATAAAGCACG+TGG - chr4_4:70406214-70406233 Msa0699640:CDS 35.0%
ATAATAGGTATAGTAGGACC+TGG + chr4_4:70406249-70406268 None:intergenic 35.0%
! GTAGTATTTTCAATGAGTCG+TGG - chr4_4:70406311-70406330 Msa0699640:CDS 35.0%
TGCTAAATCCACATGTGTTA+TGG - chr4_4:70406371-70406390 Msa0699640:intron 35.0%
AGAGAGTTATTAAAGGGAAG+AGG + chr4_4:70406495-70406514 None:intergenic 35.0%
TCACCCAAAACATGAGTTAA+AGG + chr4_4:70406612-70406631 None:intergenic 35.0%
GAACTTATCAAACTCTTTGC+TGG + chr4_4:70406757-70406776 None:intergenic 35.0%
! AACATGCTTTTGAACAAAGG+TGG + chr4_4:70406787-70406806 None:intergenic 35.0%
TCTAAATGGGAAGACAAACT+TGG - chr4_4:70406843-70406862 Msa0699640:CDS 35.0%
AATCAACATGGCATCATCTC+AGG - chr4_4:70404913-70404932 Msa0699640:CDS 40.0%
!! GAGAGCACTCATTCAATTCT+TGG - chr4_4:70404950-70404969 Msa0699640:CDS 40.0%
! TCTGGGCGAAGAAACATTTT+TGG + chr4_4:70405016-70405035 None:intergenic 40.0%
GGATTGAGGGTTCTTTATCT+GGG + chr4_4:70405033-70405052 None:intergenic 40.0%
AGGATTGAGGGTTCTTTATC+TGG + chr4_4:70405034-70405053 None:intergenic 40.0%
TTCTCAGCATGCAAAGATTG+GGG - chr4_4:70405142-70405161 Msa0699640:intron 40.0%
TATATGCAGGTGGTGAATCA+CGG - chr4_4:70405407-70405426 Msa0699640:intron 40.0%
TGTGGCTTTCTTCTTGCAAT+AGG + chr4_4:70405611-70405630 None:intergenic 40.0%
GATAAGCACCTTAGTGATGA+TGG + chr4_4:70405650-70405669 None:intergenic 40.0%
CTGATTAAGGATGGTTATGC+CGG + chr4_4:70406041-70406060 None:intergenic 40.0%
GAGTTATTAAAGGGAAGAGG+AGG + chr4_4:70406492-70406511 None:intergenic 40.0%
AGACAAACTTGGAGAGAATG+AGG - chr4_4:70406854-70406873 Msa0699640:exon 40.0%
AATCAACATGGCATCATCTC+AGG - chr4_4:70404913-70404932 Msa0699640:CDS 40.0%
!! GAGAGCACTCATTCAATTCT+TGG - chr4_4:70404950-70404969 Msa0699640:CDS 40.0%
! TCTGGGCGAAGAAACATTTT+TGG + chr4_4:70405016-70405035 None:intergenic 40.0%
GGATTGAGGGTTCTTTATCT+GGG + chr4_4:70405033-70405052 None:intergenic 40.0%
AGGATTGAGGGTTCTTTATC+TGG + chr4_4:70405034-70405053 None:intergenic 40.0%
TTCTCAGCATGCAAAGATTG+GGG - chr4_4:70405142-70405161 Msa0699640:intron 40.0%
TATATGCAGGTGGTGAATCA+CGG - chr4_4:70405407-70405426 Msa0699640:intron 40.0%
TGTGGCTTTCTTCTTGCAAT+AGG + chr4_4:70405611-70405630 None:intergenic 40.0%
GATAAGCACCTTAGTGATGA+TGG + chr4_4:70405650-70405669 None:intergenic 40.0%
CTGATTAAGGATGGTTATGC+CGG + chr4_4:70406041-70406060 None:intergenic 40.0%
GAGTTATTAAAGGGAAGAGG+AGG + chr4_4:70406492-70406511 None:intergenic 40.0%
AGACAAACTTGGAGAGAATG+AGG - chr4_4:70406854-70406873 Msa0699640:exon 40.0%
GGGAATTGATTGCAAGGGAT+TGG + chr4_4:70405068-70405087 None:intergenic 45.0%
CAAAGATTGGGGTTTCTTCC+AGG - chr4_4:70405153-70405172 Msa0699640:intron 45.0%
GGAGCTGTCATTAGATGTGA+AGG - chr4_4:70405542-70405561 Msa0699640:intron 45.0%
GGGAGTTGAGGAAAAAGATG+TGG + chr4_4:70405629-70405648 None:intergenic 45.0%
!! CTTAGTGATGATGGGAGTTG+AGG + chr4_4:70405641-70405660 None:intergenic 45.0%
CTCAACTCCCATCATCACTA+AGG - chr4_4:70405639-70405658 Msa0699640:CDS 45.0%
GCATATGTGAAGGGATACCT+TGG - chr4_4:70405826-70405845 Msa0699640:CDS 45.0%
! TTAAAGGGAAGAGGAGGCAT+GGG + chr4_4:70406486-70406505 None:intergenic 45.0%
ATTAAAGGGAAGAGGAGGCA+TGG + chr4_4:70406487-70406506 None:intergenic 45.0%
TGTACTCTAGCATAGAGCAC+AGG - chr4_4:70406656-70406675 Msa0699640:CDS 45.0%
GTACTCTAGCATAGAGCACA+GGG - chr4_4:70406657-70406676 Msa0699640:CDS 45.0%
GGGAATTGATTGCAAGGGAT+TGG + chr4_4:70405068-70405087 None:intergenic 45.0%
CAAAGATTGGGGTTTCTTCC+AGG - chr4_4:70405153-70405172 Msa0699640:intron 45.0%
GGAGCTGTCATTAGATGTGA+AGG - chr4_4:70405542-70405561 Msa0699640:intron 45.0%
GGGAGTTGAGGAAAAAGATG+TGG + chr4_4:70405629-70405648 None:intergenic 45.0%
!! CTTAGTGATGATGGGAGTTG+AGG + chr4_4:70405641-70405660 None:intergenic 45.0%
CTCAACTCCCATCATCACTA+AGG - chr4_4:70405639-70405658 Msa0699640:CDS 45.0%
GCATATGTGAAGGGATACCT+TGG - chr4_4:70405826-70405845 Msa0699640:CDS 45.0%
! TTAAAGGGAAGAGGAGGCAT+GGG + chr4_4:70406486-70406505 None:intergenic 45.0%
ATTAAAGGGAAGAGGAGGCA+TGG + chr4_4:70406487-70406506 None:intergenic 45.0%
TGTACTCTAGCATAGAGCAC+AGG - chr4_4:70406656-70406675 Msa0699640:CDS 45.0%
GTACTCTAGCATAGAGCACA+GGG - chr4_4:70406657-70406676 Msa0699640:CDS 45.0%
!! ATCAAATTAATTTATATAAT+AGG + chr4_4:70406264-70406283 None:intergenic 5.0%
!! ATCAAATTAATTTATATAAT+AGG + chr4_4:70406264-70406283 None:intergenic 5.0%
CAACATGGCATCATCTCAGG+TGG - chr4_4:70404916-70404935 Msa0699640:CDS 50.0%
GCATCTGGAAGAAAGGTCAC+AGG + chr4_4:70406112-70406131 None:intergenic 50.0%
AGCACGTGGTGTATTGAACC+AGG - chr4_4:70406228-70406247 Msa0699640:CDS 50.0%
CAACATGGCATCATCTCAGG+TGG - chr4_4:70404916-70404935 Msa0699640:CDS 50.0%
GCATCTGGAAGAAAGGTCAC+AGG + chr4_4:70406112-70406131 None:intergenic 50.0%
AGCACGTGGTGTATTGAACC+AGG - chr4_4:70406228-70406247 Msa0699640:CDS 50.0%
TTGATGCCGTCGACGAGCTC+CGG + chr4_4:70406001-70406020 None:intergenic 60.0%
GGCATCAACCCTCACTCCGA+CGG - chr4_4:70406013-70406032 Msa0699640:intron 60.0%
GATGGTTATGCCGGAGCCGT+CGG + chr4_4:70406032-70406051 None:intergenic 60.0%
TTGATGCCGTCGACGAGCTC+CGG + chr4_4:70406001-70406020 None:intergenic 60.0%
GGCATCAACCCTCACTCCGA+CGG - chr4_4:70406013-70406032 Msa0699640:intron 60.0%
GATGGTTATGCCGGAGCCGT+CGG + chr4_4:70406032-70406051 None:intergenic 60.0%
CTATCCGCCATGCCCGCAAC+CGG - chr4_4:70405979-70405998 Msa0699640:intron 65.0%
AACCCTCACTCCGACGGCTC+CGG - chr4_4:70406019-70406038 Msa0699640:intron 65.0%
CTATCCGCCATGCCCGCAAC+CGG - chr4_4:70405979-70405998 Msa0699640:intron 65.0%
AACCCTCACTCCGACGGCTC+CGG - chr4_4:70406019-70406038 Msa0699640:intron 65.0%
AGCTCCGGTTGCGGGCATGG+CGG + chr4_4:70405986-70406005 None:intergenic 70.0%
ACGAGCTCCGGTTGCGGGCA+TGG + chr4_4:70405989-70406008 None:intergenic 70.0%
CGTCGACGAGCTCCGGTTGC+GGG + chr4_4:70405994-70406013 None:intergenic 70.0%
CCGTCGACGAGCTCCGGTTG+CGG + chr4_4:70405995-70406014 None:intergenic 70.0%
CCGCAACCGGAGCTCGTCGA+CGG - chr4_4:70405992-70406011 Msa0699640:intron 70.0%
TGCCGGAGCCGTCGGAGTGA+GGG + chr4_4:70406024-70406043 None:intergenic 70.0%
ATGCCGGAGCCGTCGGAGTG+AGG + chr4_4:70406025-70406044 None:intergenic 70.0%
AGCTCCGGTTGCGGGCATGG+CGG + chr4_4:70405986-70406005 None:intergenic 70.0%
ACGAGCTCCGGTTGCGGGCA+TGG + chr4_4:70405989-70406008 None:intergenic 70.0%
CGTCGACGAGCTCCGGTTGC+GGG + chr4_4:70405994-70406013 None:intergenic 70.0%
CCGTCGACGAGCTCCGGTTG+CGG + chr4_4:70405995-70406014 None:intergenic 70.0%
CCGCAACCGGAGCTCGTCGA+CGG - chr4_4:70405992-70406011 Msa0699640:intron 70.0%
TGCCGGAGCCGTCGGAGTGA+GGG + chr4_4:70406024-70406043 None:intergenic 70.0%
ATGCCGGAGCCGTCGGAGTG+AGG + chr4_4:70406025-70406044 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 70404901 70406882 70404901 ID=Msa0699640;Name=Msa0699640
chr4_4 mRNA 70404901 70406882 70404901 ID=Msa0699640-mRNA-1;Parent=Msa0699640;Name=Msa0699640-mRNA-1;_AED=0.41;_eAED=0.41;_QI=19|1|0.5|1|1|1|4|0|355
chr4_4 exon 70404901 70405143 70404901 ID=Msa0699640-mRNA-1:exon:21314;Parent=Msa0699640-mRNA-1
chr4_4 exon 70405621 70405945 70405621 ID=Msa0699640-mRNA-1:exon:21313;Parent=Msa0699640-mRNA-1
chr4_4 exon 70406123 70406367 70406123 ID=Msa0699640-mRNA-1:exon:21312;Parent=Msa0699640-mRNA-1
chr4_4 exon 70406609 70406882 70406609 ID=Msa0699640-mRNA-1:exon:21311;Parent=Msa0699640-mRNA-1
chr4_4 five_prime_UTR 70406864 70406882 70406864 ID=Msa0699640-mRNA-1:five_prime_utr;Parent=Msa0699640-mRNA-1
chr4_4 CDS 70406609 70406863 70406609 ID=Msa0699640-mRNA-1:cds;Parent=Msa0699640-mRNA-1
chr4_4 CDS 70406123 70406367 70406123 ID=Msa0699640-mRNA-1:cds;Parent=Msa0699640-mRNA-1
chr4_4 CDS 70405621 70405945 70405621 ID=Msa0699640-mRNA-1:cds;Parent=Msa0699640-mRNA-1
chr4_4 CDS 70404901 70405143 70404901 ID=Msa0699640-mRNA-1:cds;Parent=Msa0699640-mRNA-1
Gene Sequence

>Msa0699640

ATGGCATCATCTCAGGTGGCTAATATCTTTGAGAGCACTCATTCAATTCTTGGTGTTATGGATGAAGTGATTAATAAACCCGAAATGGGAATACCAAAAATGTTTCTTCGCCCAGATAAAGAACCCTCAATCCTAACAAATGAAACCAATCCCTTGCAATCAATTCCCGTTTTTGACTTTCAAACCTTGATATGTGGTGACAATACTGAACTTGACAAGTTATTCTCAGCATGCAAAGATTGGGGTTTCTTCCAGGTGGTGAATCACGGTATTAGCTCTGAATTGCTTGAGAAGCTGAAATTTGAGATTCCAAATTTTTTCAAGCTTCCTGTTGAAGAGAAAACAAAATACAAAATAAGACAAGGAGATTTTCAAGGTTATGGAGCTGTCATTAGATGTGAAGGTCAAAAACTTGATTGGGGTGACAGATTCTTCATGATTACAAATCCTATTGCAAGAAGAAAGCCACATCTTTTTCCTCAACTCCCATCATCACTAAGGGATACCTTGGAGTCATATATCTTAGAATTGAAGAAACTTGGCATGACACTTTTTGAATTATTGGGAAAAGCCATAAAGATGGATATGAAGGAAGTAGAGAATATGTTTGATGATGGAAATCAATCAATAAGGATGACATACTATCCGCCATGCCCGCAACCGGAGCTCGTCGACGGCATCAACCCTCACTCCGACGGCTCCGGCATAACCATCCTTAATCAGCTTAATGGAGTTGAAGGACTAGAGATTAAGAAAGATGGAGTTTGGATTCCTGTGACCTTTCTTCCAGATGCTTTTGTAGTTAATATTGGAGACATCATGGAGATTCTAAGCAATGGGGTGTACTCTAGCATAGAGCACAGGGTTTCAGTAAACAAAGAAAAGGAGAGAGTTTCTATTGCTATGTTCTTCAACACCAAATTTGAAGCAGAAATTGGACCAGCAAAGAGTTTGATAAGTTCTGAAAATCCACCTTTGTTCAAAAGCATGTTGATGGAAGAATACTCCAAATACTTTTTTTCAAGAAATCTAAATGGGAAGACAAACTTGGAGAGAATGAGGATTTAA
Protein sequence

>Msa0699640

MASSQVANIFESTHSILGVMDEVINKPEMGIPKMFLRPDKEPSILTNETNPLQSIPVFDFQTLICGDNTELDKLFSACKDWGFFQVVNHGISSELLEKLKFEIPNFFKLPVEEKTKYKIRQGDFQGYGAVIRCEGQKLDWGDRFFMITNPIARRKPHLFPQLPSSLRDTLESYILELKKLGMTLFELLGKAIKMDMKEVENMFDDGNQSIRMTYYPPCPQPELVDGINPHSDGSGITILNQLNGVEGLEIKKDGVWIPVTFLPDAFVVNIGDIMEILSNGVYSSIEHRVSVNKEKERVSIAMFFNTKFEAEIGPAKSLISSENPPLFKSMLMEEYSKYFFSRNLNGKTNLERMRI*