AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0616300


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0616300 MtrunA17_Chr8g0375701 96.620 355 12 0 1 355 1 355 0.0 710
Msa0616300 MtrunA17_Chr8g0375671 47.727 352 178 3 9 355 7 357 2.44e-121 354
Msa0616300 MtrunA17_Chr2g0314401 52.698 315 146 2 44 355 40 354 6.22e-120 350
Msa0616300 MtrunA17_Chr5g0420941 50.000 326 161 2 31 355 22 346 4.77e-119 348
Msa0616300 MtrunA17_Chr5g0423191 47.384 344 179 2 13 355 6 348 1.19e-118 347
Msa0616300 MtrunA17_Chr5g0421041 47.965 344 175 3 13 355 6 346 7.24e-117 342
Msa0616300 MtrunA17_Chr5g0421091 48.624 327 165 3 31 355 22 347 1.59e-116 342
Msa0616300 MtrunA17_Chr5g0423251 47.774 337 174 2 20 355 13 348 2.77e-116 341
Msa0616300 MtrunA17_Chr5g0420901 48.773 326 165 2 31 355 23 347 6.51e-115 337
Msa0616300 MtrunA17_Chr8g0365241 45.797 345 184 3 13 355 16 359 9.99e-115 337
Msa0616300 MtrunA17_Chr5g0423211 48.936 329 162 4 31 355 24 350 2.32e-113 333
Msa0616300 MtrunA17_Chr5g0420981 45.858 338 181 2 20 355 18 355 2.98e-113 333
Msa0616300 MtrunA17_Chr2g0314381 51.220 328 156 3 31 355 54 380 3.62e-113 334
Msa0616300 MtrunA17_Chr5g0420951 43.417 357 198 3 1 355 1 355 2.93e-112 331
Msa0616300 MtrunA17_Chr2g0314391 49.695 328 161 3 31 355 47 373 2.55e-111 329
Msa0616300 MtrunA17_Chr5g0421101 44.957 347 189 2 10 355 3 348 5.21e-110 325
Msa0616300 MtrunA17_Chr5g0423221 44.675 338 184 3 20 355 37 373 7.76e-110 325
Msa0616300 MtrunA17_Chr5g0421011 45.640 344 185 2 13 355 6 348 3.25e-108 320
Msa0616300 MtrunA17_Chr5g0423201 44.828 348 189 3 10 355 3 349 7.60e-108 319
Msa0616300 MtrunA17_Chr8g0375601 44.160 351 190 3 11 355 2 352 9.31e-108 320
Msa0616300 MtrunA17_Chr8g0375571 46.364 330 171 3 31 355 22 350 1.92e-106 316
Msa0616300 MtrunA17_Chr8g0375681 52.030 271 129 1 86 355 15 285 2.94e-102 303
Msa0616300 MtrunA17_Chr1g0162191 45.342 322 171 4 31 348 23 343 3.63e-96 290
Msa0616300 MtrunA17_Chr5g0420721 51.822 247 118 1 110 355 4 250 8.64e-88 265
Msa0616300 MtrunA17_Chr7g0239821 38.576 337 206 1 20 355 29 365 1.60e-86 265
Msa0616300 MtrunA17_Chr2g0314371 46.179 301 134 5 31 306 29 326 1.02e-84 259
Msa0616300 MtrunA17_Chr7g0239101 38.957 326 198 1 31 355 31 356 1.87e-83 257
Msa0616300 MtrunA17_Chr2g0296371 39.329 328 189 5 31 351 28 352 1.34e-80 250
Msa0616300 MtrunA17_Chr7g0239121 37.278 338 210 2 20 355 16 353 2.07e-80 249
Msa0616300 MtrunA17_Chr7g0239111 36.000 350 222 2 7 355 8 356 3.15e-78 244
Msa0616300 MtrunA17_Chr3g0087031 38.663 344 202 6 7 345 12 351 1.03e-77 243
Msa0616300 MtrunA17_Chr7g0242551 40.000 325 186 4 37 353 37 360 9.29e-77 240
Msa0616300 MtrunA17_Chr4g0006371 37.209 344 195 5 31 353 25 368 1.60e-72 229
Msa0616300 MtrunA17_Chr5g0437181 35.542 332 207 3 30 354 24 355 1.29e-71 227
Msa0616300 MtrunA17_Chr3g0145171 40.514 311 167 6 55 355 52 354 3.83e-71 225
Msa0616300 MtrunA17_Chr3g0113641 35.843 332 204 4 31 354 26 356 2.69e-70 223
Msa0616300 MtrunA17_Chr7g0239091 33.929 336 213 2 20 355 125 451 8.94e-69 223
Msa0616300 MtrunA17_Chr7g0232161 41.026 273 158 3 20 290 25 296 1.33e-68 218
Msa0616300 MtrunA17_Chr8g0370711 39.159 309 174 5 55 355 52 354 4.05e-67 215
Msa0616300 MtrunA17_Chr7g0239071 38.351 279 170 2 78 355 24 301 7.48e-64 205
Msa0616300 MtrunA17_Chr8g0370721 36.893 309 181 5 55 355 52 354 1.55e-61 201
Msa0616300 MtrunA17_Chr3g0128001 34.877 324 203 6 31 351 15 333 4.29e-61 199
Msa0616300 MtrunA17_Chr4g0064781 36.538 312 188 5 48 355 43 348 9.25e-60 196
Msa0616300 MtrunA17_Chr5g0424201 36.774 310 188 5 31 335 20 326 3.76e-59 194
Msa0616300 MtrunA17_Chr3g0109041 33.033 333 210 6 31 353 21 350 6.10e-59 194
Msa0616300 MtrunA17_Chr2g0311921 33.908 348 204 6 23 355 22 358 3.90e-58 192
Msa0616300 MtrunA17_Chr8g0336781 33.242 364 203 11 11 355 58 400 5.69e-56 187
Msa0616300 MtrunA17_Chr7g0265221 33.903 351 198 8 31 355 38 380 3.53e-55 185
Msa0616300 MtrunA17_Chr5g0424211 34.983 303 185 7 31 325 18 316 5.32e-55 183
Msa0616300 MtrunA17_Chr2g0311831 32.869 359 212 8 11 355 28 371 2.04e-54 182
Msa0616300 MtrunA17_Chr4g0045451 36.207 290 149 6 76 342 54 330 2.51e-54 182
Msa0616300 MtrunA17_Chr1g0179801 34.561 353 211 10 18 355 26 373 5.33e-54 182
Msa0616300 MtrunA17_Chr5g0420881 53.472 144 67 0 212 355 1 144 2.19e-53 173
Msa0616300 MtrunA17_Chr8g0336851 31.405 363 210 10 11 355 23 364 2.68e-53 179
Msa0616300 MtrunA17_Chr8g0336861 33.426 359 210 11 11 355 23 366 2.70e-53 179
Msa0616300 MtrunA17_Chr2g0311761 32.312 359 215 6 11 355 28 372 4.35e-53 179
Msa0616300 MtrunA17_Chr6g0472861 33.611 360 208 12 10 350 21 368 6.71e-53 179
Msa0616300 MtrunA17_Chr1g0162361 32.710 321 192 9 52 355 24 337 7.40e-53 178
Msa0616300 MtrunA17_Chr5g0426891 34.557 327 186 9 43 355 30 342 7.73e-53 177
Msa0616300 MtrunA17_Chr3g0145181 37.500 272 151 4 70 330 68 331 8.91e-53 178
Msa0616300 MtrunA17_Chr8g0348081 31.680 363 209 10 11 355 23 364 1.58e-52 177
Msa0616300 MtrunA17_Chr8g0336761 31.653 357 217 9 11 355 23 364 1.59e-52 177
Msa0616300 MtrunA17_Chr8g0345831 31.707 328 219 5 31 355 18 343 1.98e-52 177
Msa0616300 MtrunA17_Chr3g0114861 35.357 280 175 4 68 342 50 328 3.83e-52 176
Msa0616300 MtrunA17_Chr3g0125201 34.354 294 174 5 54 340 2 283 4.89e-52 174
Msa0616300 MtrunA17_Chr8g0336751 30.790 367 225 8 3 355 46 397 1.04e-51 176
Msa0616300 MtrunA17_Chr4g0045471 32.317 328 192 10 53 355 24 346 2.01e-51 174
Msa0616300 MtrunA17_Chr4g0045441 34.915 295 169 8 76 355 54 340 2.70e-51 174
Msa0616300 MtrunA17_Chr5g0398291 35.463 313 184 8 31 327 19 329 4.76e-51 173
Msa0616300 MtrunA17_Chr1g0187821 31.148 366 228 10 3 355 16 370 4.92e-51 174
Msa0616300 MtrunA17_Chr4g0055591 31.148 366 227 10 1 355 10 361 1.15e-50 172
Msa0616300 MtrunA17_Chr1g0162351 30.699 329 197 9 53 355 67 390 1.41e-50 173
Msa0616300 MtrunA17_Chr1g0187831 29.290 338 218 8 31 354 43 373 2.80e-50 172
Msa0616300 MtrunA17_Chr1g0162321 30.699 329 197 9 53 355 67 390 2.88e-50 172
Msa0616300 MtrunA17_Chr2g0332191 35.235 298 172 10 55 339 52 341 6.95e-50 171
Msa0616300 MtrunA17_Chr2g0311701 32.055 365 212 9 4 348 21 369 1.49e-49 170
Msa0616300 MtrunA17_Chr1g0187811 29.738 343 216 7 31 355 158 493 1.52e-49 173
Msa0616300 MtrunA17_Chr8g0354261 32.967 364 208 12 11 355 28 374 1.72e-49 170
Msa0616300 MtrunA17_Chr4g0050031 32.927 328 204 8 38 355 45 366 1.93e-49 169
Msa0616300 MtrunA17_Chr7g0266651 29.775 356 227 9 11 355 19 362 3.40e-49 169
Msa0616300 MtrunA17_Chr2g0311691 32.861 353 205 9 4 338 15 353 5.10e-49 169
Msa0616300 MtrunA17_Chr3g0145201 37.500 272 151 4 70 330 703 966 5.58e-49 176
Msa0616300 MtrunA17_Chr7g0265351 35.669 314 178 11 53 355 37 337 1.35e-48 166
Msa0616300 MtrunA17_Chr8g0336631 31.285 358 218 9 11 355 23 365 1.61e-48 167
Msa0616300 MtrunA17_Chr2g0311861 31.339 351 208 9 11 355 24 347 1.91e-48 166
Msa0616300 MtrunA17_Chr5g0412651 32.609 322 200 7 32 342 17 332 3.38e-48 166
Msa0616300 MtrunA17_Chr6g0455481 33.333 318 199 7 31 342 19 329 3.99e-48 165
Msa0616300 MtrunA17_Chr8g0354241 31.564 358 221 10 11 355 28 374 4.67e-48 166
Msa0616300 MtrunA17_Chr1g0184121 33.003 303 181 9 53 343 35 327 6.46e-48 165
Msa0616300 MtrunA17_Chr4g0045411 29.503 322 203 8 53 355 28 344 1.45e-47 164
Msa0616300 MtrunA17_Chr2g0311681 31.714 350 213 8 4 338 15 353 1.65e-47 164
Msa0616300 MtrunA17_Chr2g0311711 31.755 359 210 10 4 344 19 360 5.68e-47 163
Msa0616300 MtrunA17_Chr3g0093761 36.039 308 184 9 53 355 54 353 7.43e-47 162
Msa0616300 MtrunA17_Chr1g0184111 31.803 305 186 9 53 345 35 329 8.24e-47 162
Msa0616300 MtrunA17_Chr8g0351101 33.654 312 184 7 31 327 33 336 2.41e-46 161
Msa0616300 MtrunA17_Chr1g0184161 31.741 293 193 6 54 342 37 326 2.61e-46 160
Msa0616300 MtrunA17_Chr3g0130391 31.250 320 204 5 13 320 27 342 3.61e-46 161
Msa0616300 MtrunA17_Chr2g0289341 30.164 305 194 6 52 347 1 295 3.67e-46 159
Msa0616300 MtrunA17_Chr7g0235951 28.689 366 234 8 4 355 21 373 4.53e-46 161
Msa0616300 MtrunA17_Chr3g0093751 35.873 315 176 11 53 355 54 354 1.18e-45 159
Msa0616300 MtrunA17_Chr2g0311741 32.609 322 191 10 47 355 19 327 2.04e-45 158
Msa0616300 MtrunA17_Chr7g0225881 30.769 364 217 10 11 355 23 370 2.53e-45 159
Msa0616300 MtrunA17_Chr4g0045431 32.508 323 185 10 56 355 33 345 3.93e-45 158
Msa0616300 MtrunA17_Chr3g0093741 34.076 314 183 10 53 355 54 354 4.21e-45 158
Msa0616300 MtrunA17_Chr4g0066121 32.558 344 198 13 11 338 23 348 4.72e-45 158
Msa0616300 MtrunA17_Chr7g0220011 33.121 314 177 6 53 350 37 333 4.84e-45 157
Msa0616300 MtrunA17_Chr7g0250511 27.933 358 242 8 5 355 3 351 5.33e-45 157
Msa0616300 MtrunA17_Chr3g0126741 32.268 313 190 9 54 354 58 360 6.07e-45 157
Msa0616300 MtrunA17_Chr8g0375641 46.951 164 81 3 9 167 7 169 6.26e-45 152
Msa0616300 MtrunA17_Chr3g0125421 34.146 328 189 10 31 339 16 335 8.72e-45 157
Msa0616300 MtrunA17_Chr1g0184101 32.831 332 201 10 27 350 15 332 2.26e-44 155
Msa0616300 MtrunA17_Chr1g0204181 30.267 337 215 7 19 339 26 358 2.75e-44 156
Msa0616300 MtrunA17_Chr1g0161041 31.105 344 221 8 11 348 55 388 4.77e-44 156
Msa0616300 MtrunA17_Chr5g0412671 30.864 324 210 6 29 342 13 332 7.33e-44 154
Msa0616300 MtrunA17_Chr8g0371931 31.776 321 205 8 28 337 13 330 8.27e-44 155
Msa0616300 MtrunA17_Chr1g0167951 31.638 354 220 9 11 355 15 355 1.27e-43 154
Msa0616300 MtrunA17_Chr1g0167911 30.769 351 214 10 11 348 15 349 1.69e-43 154
Msa0616300 MtrunA17_Chr5g0412681 30.405 296 191 6 54 342 32 319 1.80e-43 153
Msa0616300 MtrunA17_Chr8g0375661 44.586 157 81 3 16 167 14 169 2.08e-43 148
Msa0616300 MtrunA17_Chr3g0121141 28.239 301 203 6 52 347 1 293 2.25e-43 152
Msa0616300 MtrunA17_Chr2g0319491 31.615 291 179 6 53 337 31 307 2.83e-43 152
Msa0616300 MtrunA17_Chr5g0439011 30.742 283 184 4 71 347 22 298 3.01e-43 152
Msa0616300 MtrunA17_Chr5g0405411 32.063 315 196 9 35 336 20 329 3.17e-43 153
Msa0616300 MtrunA17_Chr1g0184151 30.375 293 197 6 54 342 37 326 3.33e-43 152
Msa0616300 MtrunA17_Chr3g0102041 31.481 324 204 8 37 354 27 338 5.22e-43 152
Msa0616300 MtrunA17_Chr7g0220001 30.960 323 199 10 31 342 18 327 8.66e-43 151
Msa0616300 MtrunA17_Chr4g0045461 36.299 281 160 6 76 342 54 329 1.02e-42 152
Msa0616300 MtrunA17_Chr6g0474391 30.383 339 212 10 19 339 31 363 1.14e-42 152
Msa0616300 MtrunA17_Chr1g0167961 30.508 354 226 8 11 355 30 372 1.24e-42 152
Msa0616300 MtrunA17_Chr2g0311631 30.556 360 224 12 9 355 15 361 2.76e-42 150
Msa0616300 MtrunA17_Chr8g0371921 32.234 273 177 4 72 337 59 330 7.22e-42 149
Msa0616300 MtrunA17_Chr1g0191201 31.392 309 195 6 26 322 28 331 1.10e-41 149
Msa0616300 MtrunA17_Chr7g0236011 29.315 365 233 10 4 355 21 373 2.35e-41 148
Msa0616300 MtrunA17_Chr8g0364471 27.762 353 232 8 11 351 28 369 2.45e-41 148
Msa0616300 MtrunA17_Chr6g0488511 34.164 281 163 7 54 323 2 271 2.80e-41 146
Msa0616300 MtrunA17_Chr8g0335411 29.839 372 222 13 4 355 21 373 5.09e-41 147
Msa0616300 MtrunA17_Chr4g0066991 29.904 311 186 6 54 355 66 353 1.81e-40 145
Msa0616300 MtrunA17_Chr1g0161111 30.659 349 226 9 11 352 91 430 4.56e-40 146
Msa0616300 MtrunA17_Chr1g0161081 30.347 346 221 9 11 348 32 365 4.58e-40 145
Msa0616300 MtrunA17_Chr7g0247991 30.352 369 224 11 4 355 21 373 2.11e-39 143
Msa0616300 MtrunA17_Chr1g0184241 27.701 361 239 8 3 355 21 367 1.15e-38 141
Msa0616300 MtrunA17_Chr2g0285931 30.225 311 192 8 49 344 22 322 5.83e-38 138
Msa0616300 MtrunA17_Chr1g0148771 30.769 299 193 8 55 350 63 350 9.87e-37 135
Msa0616300 MtrunA17_Chr1g0167931 27.920 351 200 9 11 355 15 318 1.90e-36 134
Msa0616300 MtrunA17_Chr3g0105281 31.365 271 164 7 41 303 23 279 2.10e-35 131
Msa0616300 MtrunA17_Chr3g0114871 33.077 260 166 5 31 285 18 274 2.30e-35 130
Msa0616300 MtrunA17_Chr8g0384461 26.667 345 235 6 6 338 1 339 6.14e-35 131
Msa0616300 MtrunA17_Chr7g0235981 32.246 276 171 7 89 355 59 327 7.21e-35 130
Msa0616300 MtrunA17_Chr1g0170631 32.292 192 125 3 167 355 3 192 9.99e-35 126
Msa0616300 MtrunA17_Chr5g0420891 44.203 138 75 2 31 167 23 159 1.62e-34 124
Msa0616300 MtrunA17_Chr4g0068891 28.963 328 204 13 42 354 6 319 8.62e-33 124
Msa0616300 MtrunA17_Chr1g0194321 28.395 324 198 12 55 355 20 332 1.15e-32 124
Msa0616300 MtrunA17_Chr8g0358941 29.730 296 185 8 77 354 44 334 3.69e-32 123
Msa0616300 MtrunA17_Chr8g0336801 38.621 145 85 2 214 355 13 156 2.54e-31 115
Msa0616300 MtrunA17_Chr8g0384481 28.829 333 213 9 21 337 28 352 3.94e-30 118
Msa0616300 MtrunA17_Chr2g0313111 28.966 290 190 7 74 353 42 325 1.67e-29 115
Msa0616300 MtrunA17_Chr4g0064771 37.952 166 98 2 168 330 27 190 1.87e-29 112
Msa0616300 MtrunA17_Chr4g0011311 29.181 281 180 10 3 276 20 288 1.45e-28 112
Msa0616300 MtrunA17_Chr4g0052251 27.208 283 191 7 74 344 43 322 3.34e-28 112
Msa0616300 MtrunA17_Chr8g0375581 53.488 86 40 0 188 273 1 86 8.90e-28 104
Msa0616300 MtrunA17_Chr4g0053251 29.373 303 174 9 52 323 5 298 1.08e-27 110
Msa0616300 MtrunA17_Chr3g0126761 40.559 143 83 2 212 354 91 231 1.49e-27 108
Msa0616300 MtrunA17_Chr4g0075471 34.752 141 90 1 205 343 22 162 5.68e-27 104
Msa0616300 MtrunA17_Chr4g0055911 29.766 299 186 11 54 335 8 299 7.31e-27 108
Msa0616300 MtrunA17_Chr7g0256741 30.032 313 201 7 53 355 8 312 1.24e-26 107
Msa0616300 MtrunA17_Chr8g0336871 33.520 179 109 3 180 355 3 174 4.77e-26 102
Msa0616300 MtrunA17_Chr3g0092531 27.675 271 184 8 71 337 27 289 1.16e-24 102
Msa0616300 MtrunA17_Chr5g0394071 39.844 128 70 2 210 337 45 165 1.27e-24 99.0
Msa0616300 MtrunA17_Chr7g0233661 39.844 128 70 2 210 337 19 139 4.21e-24 97.1
Msa0616300 MtrunA17_Chr6g0486831 29.452 292 179 9 68 335 32 320 7.93e-24 100
Msa0616300 MtrunA17_Chr8g0389941 29.180 305 166 14 71 342 48 335 1.43e-23 99.8
Msa0616300 MtrunA17_Chr5g0407781 23.529 306 220 6 53 355 3 297 4.22e-23 97.8
Msa0616300 MtrunA17_Chr8g0375591 38.938 113 65 1 20 128 11 123 4.74e-23 93.2
Msa0616300 MtrunA17_Chr4g0055871 30.605 281 158 12 77 335 29 294 1.12e-22 96.7
Msa0616300 MtrunA17_Chr8g0362741 29.520 271 161 10 11 276 28 273 2.23e-22 95.5
Msa0616300 MtrunA17_Chr2g0293931 32.620 187 114 6 169 344 9 194 2.62e-22 93.6
Msa0616300 MtrunA17_Chr8g0348951 26.667 315 206 10 51 353 6 307 4.51e-22 95.1
Msa0616300 MtrunA17_Chr4g0037611 33.742 163 97 4 174 335 1 153 6.55e-22 91.7
Msa0616300 MtrunA17_Chr2g0314361 49.367 79 40 0 277 355 1 79 9.58e-22 88.2
Msa0616300 MtrunA17_Chr4g0004071 28.094 299 200 7 53 342 7 299 5.14e-21 92.0
Msa0616300 MtrunA17_Chr3g0138351 28.674 279 181 9 73 341 33 303 8.26e-19 85.9
Msa0616300 MtrunA17_Chr8g0336831 29.752 242 130 10 11 234 23 242 9.90e-19 84.7
Msa0616300 MtrunA17_Chr5g0407731 26.059 307 199 9 55 351 33 321 1.36e-18 85.5
Msa0616300 MtrunA17_Chr7g0247741 27.946 297 189 10 55 338 11 295 1.42e-18 85.5
Msa0616300 MtrunA17_Chr4g0004061 26.861 309 204 10 45 341 1 299 5.42e-18 83.6
Msa0616300 MtrunA17_Chr1g0158011 29.949 197 131 5 164 355 67 261 7.07e-18 82.4
Msa0616300 MtrunA17_Chr4g0009541 25.166 302 202 10 55 340 7 300 1.83e-17 82.0
Msa0616300 MtrunA17_Chr2g0319521 39.474 114 60 4 167 276 16 124 4.53e-16 74.3
Msa0616300 MtrunA17_Chr5g0420731 41.772 79 45 1 13 91 6 83 1.46e-15 72.0
Msa0616300 MtrunA17_Chr8g0375621 55.556 54 24 0 190 243 3 56 1.62e-15 70.5
Msa0616300 MtrunA17_Chr4g0009561 26.154 325 195 12 55 353 7 312 2.22e-14 73.2
Msa0616300 MtrunA17_Chr8g0364171 34.746 118 64 4 165 276 16 126 5.67e-14 68.6
Msa0616300 MtrunA17_Chr7g0219991 36.364 99 62 1 173 271 254 351 2.35e-13 70.5
Msa0616300 MtrunA17_Chr3g0092581 33.871 124 79 3 215 337 40 161 1.61e-12 65.5
Msa0616300 MtrunA17_Chr8g0336841 36.145 83 50 1 276 355 9 91 7.57e-12 61.2
Msa0616300 MtrunA17_Chr2g0311611 38.889 72 36 2 212 276 1 71 8.62e-12 60.1
Msa0616300 MtrunA17_Chr1g0158031 28.022 182 126 3 177 355 1 180 9.41e-12 63.2
Msa0616300 MtrunA17_Chr7g0235991 30.579 121 78 2 77 195 46 162 1.63e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0616300 AT1G78550.1 50.294 340 166 2 19 355 17 356 5.14e-114 335
Msa0616300 AT1G17020.1 47.965 344 172 4 18 355 16 358 7.09e-113 333
Msa0616300 AT4G25310.1 54.861 288 125 3 70 355 69 353 1.81e-106 316
Msa0616300 AT4G25300.1 44.944 356 190 4 5 355 2 356 1.53e-104 311
Msa0616300 AT1G17010.1 46.064 343 180 4 18 355 16 358 1.92e-103 309
Msa0616300 AT1G78550.2 53.285 274 127 1 83 355 5 278 2.01e-99 295
Msa0616300 AT4G25310.2 50.174 287 112 4 70 355 69 325 1.24e-86 265
Msa0616300 AT3G21420.1 41.040 346 194 6 20 355 17 362 5.44e-84 259
Msa0616300 AT3G11180.1 39.535 301 179 2 54 351 94 394 1.73e-75 238
Msa0616300 AT3G11180.2 40.702 285 166 2 54 335 94 378 5.13e-73 232
Msa0616300 AT5G05600.1 35.671 328 204 3 31 351 38 365 1.29e-72 230
Msa0616300 AT2G38240.1 35.061 328 207 4 31 353 23 349 1.25e-71 227
Msa0616300 AT3G55970.1 36.499 337 202 7 30 354 24 360 4.83e-70 223
Msa0616300 AT5G20400.1 35.652 345 210 7 19 355 8 348 1.85e-66 214
Msa0616300 AT1G49390.1 36.336 333 203 6 30 355 18 348 2.08e-66 213
Msa0616300 AT5G54000.2 38.065 310 185 4 51 355 42 349 4.73e-66 213
Msa0616300 AT5G20550.1 36.765 340 190 9 19 341 8 339 6.53e-63 204
Msa0616300 AT5G54000.1 38.376 271 163 3 87 355 1 269 2.71e-59 192
Msa0616300 AT4G16330.2 34.494 316 192 6 44 353 56 362 3.21e-59 195
Msa0616300 AT4G25300.2 50.526 190 93 1 167 355 73 262 3.31e-59 192
Msa0616300 AT1G49390.2 37.079 267 164 3 87 351 1 265 4.40e-59 192
Msa0616300 AT1G06640.1 32.533 375 213 12 3 355 13 369 2.97e-55 185
Msa0616300 AT3G19000.1 35.873 315 179 8 55 351 32 341 6.14e-55 184
Msa0616300 AT3G13610.1 33.065 372 217 13 1 355 5 361 6.21e-54 181
Msa0616300 AT5G24530.1 33.028 327 208 7 31 351 15 336 7.59e-54 181
Msa0616300 AT3G19010.1 33.542 319 190 7 50 351 23 336 1.17e-53 180
Msa0616300 AT3G19010.4 33.542 319 190 7 50 351 23 336 1.17e-53 180
Msa0616300 AT1G06650.2 31.452 372 221 13 3 355 13 369 1.25e-53 181
Msa0616300 AT5G59540.1 31.768 362 215 10 11 355 20 366 2.06e-53 180
Msa0616300 AT1G55290.1 35.417 336 195 13 31 355 37 361 1.35e-52 178
Msa0616300 AT5G08640.2 34.185 313 196 6 30 336 18 326 2.07e-52 177
Msa0616300 AT5G08640.1 34.185 313 196 6 30 336 18 326 2.07e-52 177
Msa0616300 AT1G06620.1 31.319 364 211 8 11 355 22 365 7.09e-52 176
Msa0616300 AT5G59530.1 33.058 363 198 12 16 355 24 364 9.60e-52 176
Msa0616300 AT1G04380.1 32.268 313 190 5 54 355 44 345 2.23e-51 174
Msa0616300 AT1G77330.1 36.462 277 148 7 54 315 2 265 5.71e-51 172
Msa0616300 AT1G04350.1 30.939 362 215 9 11 355 17 360 4.30e-50 171
Msa0616300 AT2G36690.2 31.845 336 214 8 31 355 32 363 4.76e-50 171
Msa0616300 AT2G36690.1 31.845 336 214 8 31 355 32 363 4.76e-50 171
Msa0616300 AT4G22880.1 33.962 318 187 9 29 327 16 329 5.95e-50 171
Msa0616300 AT4G22880.2 33.962 318 187 9 29 327 16 329 5.95e-50 171
Msa0616300 AT4G22880.3 33.962 318 187 9 29 327 16 329 5.95e-50 171
Msa0616300 AT4G10500.1 31.118 331 220 7 29 354 18 345 1.04e-49 170
Msa0616300 AT5G43440.1 32.320 362 216 12 10 355 17 365 1.67e-49 170
Msa0616300 AT1G06645.1 29.508 366 233 9 3 355 26 379 9.34e-49 168
Msa0616300 AT4G10490.1 29.787 329 224 6 31 354 18 344 3.27e-48 166
Msa0616300 AT1G03410.2 32.055 365 226 10 3 355 7 361 4.51e-48 166
Msa0616300 AT3G55970.2 36.680 259 152 7 30 276 24 282 8.07e-48 164
Msa0616300 AT5G43450.1 31.006 358 210 11 16 355 24 362 9.07e-48 165
Msa0616300 AT1G03410.1 32.055 365 226 10 3 355 44 398 9.93e-48 166
Msa0616300 AT4G16330.1 36.078 255 152 5 105 353 7 256 2.57e-47 161
Msa0616300 AT1G03400.1 31.921 354 214 9 3 346 7 343 3.03e-47 164
Msa0616300 AT2G30830.1 30.919 359 208 11 16 355 21 358 8.15e-47 163
Msa0616300 AT3G61400.1 31.635 373 219 14 4 355 13 370 1.29e-46 162
Msa0616300 AT5G05600.2 32.806 253 163 3 31 276 38 290 2.34e-46 160
Msa0616300 AT5G07200.1 30.861 337 210 8 22 339 28 360 9.41e-46 160
Msa0616300 AT3G19010.3 31.975 319 165 8 50 351 23 306 1.50e-45 158
Msa0616300 AT4G25420.1 32.432 333 205 10 28 345 37 364 2.91e-45 159
Msa0616300 AT1G12010.1 28.716 296 199 5 56 347 8 295 1.05e-44 156
Msa0616300 AT1G05010.1 31.169 308 191 7 52 347 1 299 1.41e-44 156
Msa0616300 AT2G30840.1 29.679 374 223 12 3 355 8 362 1.72e-44 157
Msa0616300 AT1G15550.1 33.088 272 171 7 72 335 69 337 5.78e-44 155
Msa0616300 AT3G60290.1 29.483 329 208 9 37 354 38 353 2.19e-43 154
Msa0616300 AT2G19590.1 35.531 273 157 7 55 319 11 272 2.98e-43 152
Msa0616300 AT4G21200.1 32.997 297 184 6 55 344 42 330 5.22e-43 152
Msa0616300 AT2G44800.1 29.012 324 218 7 30 344 23 343 1.10e-42 152
Msa0616300 AT1G62380.1 29.514 288 191 5 56 339 8 287 1.25e-42 150
Msa0616300 AT1G60980.1 30.312 353 216 9 9 345 23 361 2.18e-42 151
Msa0616300 AT1G03400.2 29.581 382 214 10 3 346 7 371 2.14e-41 149
Msa0616300 AT3G51240.1 30.892 314 203 7 37 344 26 331 3.59e-41 148
Msa0616300 AT2G30840.3 29.412 374 218 13 3 355 8 356 6.24e-41 147
Msa0616300 AT3G12900.1 30.395 329 218 7 31 354 33 355 3.25e-40 145
Msa0616300 AT1G80340.1 31.208 298 184 8 46 335 46 330 4.28e-40 145
Msa0616300 AT5G63590.1 33.904 292 174 9 55 335 14 297 8.69e-40 143
Msa0616300 AT5G51810.1 31.790 324 198 10 31 339 42 357 1.06e-39 144
Msa0616300 AT1G78440.1 31.475 305 185 9 55 345 18 312 1.72e-39 142
Msa0616300 AT5G07480.1 30.312 320 195 11 55 355 44 354 6.66e-39 142
Msa0616300 AT1G50960.1 31.818 264 168 4 55 312 40 297 2.51e-38 140
Msa0616300 AT1G80330.1 29.841 315 193 8 35 335 33 333 2.57e-38 140
Msa0616300 AT4G21690.1 31.636 275 172 6 74 335 61 332 1.11e-37 138
Msa0616300 AT3G19000.2 32.917 240 141 7 55 276 32 269 3.04e-37 135
Msa0616300 AT2G19590.2 35.000 240 144 5 84 319 26 257 3.06e-37 136
Msa0616300 AT5G63600.1 29.329 283 192 5 55 335 33 309 1.09e-36 135
Msa0616300 AT5G63600.2 29.577 284 191 6 55 335 33 310 3.21e-36 134
Msa0616300 AT3G49620.1 34.848 264 140 7 73 314 63 316 9.06e-36 133
Msa0616300 AT2G25450.1 27.838 370 232 12 3 355 8 359 3.71e-35 132
Msa0616300 AT3G19010.2 31.837 245 148 6 50 277 23 265 4.46e-35 130
Msa0616300 AT1G06640.2 31.959 291 162 10 3 275 13 285 5.80e-35 130
Msa0616300 AT1G44090.1 32.573 307 183 9 31 322 43 340 6.30e-35 132
Msa0616300 AT1G06640.3 31.849 292 163 10 3 276 13 286 6.84e-35 129
Msa0616300 AT2G34555.1 29.310 290 187 8 55 335 27 307 2.11e-34 129
Msa0616300 AT1G47990.1 28.155 309 192 12 53 344 13 308 1.02e-33 127
Msa0616300 AT1G02400.1 29.487 312 195 12 49 345 18 319 4.36e-33 125
Msa0616300 AT1G06650.1 29.592 294 177 11 3 281 13 291 5.62e-33 125
Msa0616300 AT4G25420.2 32.184 261 160 9 28 276 37 292 6.06e-33 124
Msa0616300 AT1G30040.1 27.393 303 199 10 53 344 29 321 1.11e-32 125
Msa0616300 AT3G50210.4 31.313 297 164 9 52 314 5 295 1.09e-31 122
Msa0616300 AT3G50210.1 31.313 297 164 9 52 314 5 295 1.09e-31 122
Msa0616300 AT3G50210.3 31.313 297 164 9 52 314 5 295 1.09e-31 122
Msa0616300 AT3G49630.1 30.769 299 164 9 49 314 3 291 1.35e-31 122
Msa0616300 AT3G51240.2 33.023 215 140 3 105 316 7 220 1.81e-31 120
Msa0616300 AT3G49630.3 31.579 266 150 7 71 314 32 287 3.78e-31 120
Msa0616300 AT1G06620.2 30.175 285 155 8 11 275 22 282 9.89e-31 118
Msa0616300 AT5G43440.2 32.270 282 165 11 10 278 17 285 2.26e-30 117
Msa0616300 AT1G04380.2 31.330 233 141 4 54 278 44 265 2.47e-30 117
Msa0616300 AT5G12270.1 29.932 294 189 8 73 355 72 359 7.47e-30 117
Msa0616300 AT5G51810.2 31.923 260 158 9 31 279 42 293 2.74e-29 115
Msa0616300 AT5G59540.2 29.286 280 169 9 11 276 20 284 8.94e-29 113
Msa0616300 AT3G61400.2 30.345 290 171 11 4 276 13 288 1.23e-28 113
Msa0616300 AT5G43450.2 30.037 273 157 10 18 275 26 279 1.32e-28 112
Msa0616300 AT5G63595.1 29.151 271 164 7 43 309 13 259 2.01e-28 112
Msa0616300 AT5G07480.2 30.332 211 137 4 153 355 37 245 2.38e-28 111
Msa0616300 AT5G43935.1 28.720 289 177 8 53 335 17 282 1.66e-27 110
Msa0616300 AT2G30840.2 28.522 291 171 10 3 275 8 279 2.96e-26 107
Msa0616300 AT4G23340.1 33.103 290 158 11 77 347 30 302 3.23e-26 107
Msa0616300 AT3G46500.5 28.710 310 196 11 48 335 2 308 1.63e-25 105
Msa0616300 AT3G47190.1 29.242 277 145 9 55 303 32 285 5.72e-25 103
Msa0616300 AT5G63580.2 28.571 224 152 6 53 272 17 236 9.92e-23 95.9
Msa0616300 AT5G63580.1 28.571 224 152 6 53 272 17 236 1.24e-22 95.9
Msa0616300 AT3G46500.7 29.856 278 170 11 48 303 2 276 1.52e-22 96.7
Msa0616300 AT1G52820.1 29.139 302 194 10 51 341 9 301 1.17e-21 94.4
Msa0616300 AT1G30040.2 28.085 235 148 9 53 276 29 253 1.77e-21 92.8
Msa0616300 AT1G14130.1 25.753 299 200 9 55 345 9 293 5.29e-20 89.7
Msa0616300 AT3G50210.2 33.939 165 103 3 156 314 49 213 6.59e-20 88.2
Msa0616300 AT3G46490.1 27.673 318 200 8 45 335 1 315 8.53e-20 89.4
Msa0616300 AT3G49630.2 33.544 158 102 3 159 314 62 218 1.09e-19 87.8
Msa0616300 AT1G02400.2 27.344 256 166 10 49 292 18 265 3.81e-19 86.3
Msa0616300 AT3G46490.2 28.621 290 177 8 45 307 1 287 5.97e-19 86.7
Msa0616300 AT4G16765.6 32.178 202 122 7 151 340 42 240 3.52e-18 83.2
Msa0616300 AT4G16765.1 32.178 202 122 7 151 340 42 240 3.52e-18 83.2
Msa0616300 AT4G16765.2 32.178 202 122 7 151 340 42 240 3.52e-18 83.2
Msa0616300 AT5G58660.1 26.502 283 162 9 54 303 33 302 3.58e-18 85.1
Msa0616300 AT1G14120.2 26.537 309 205 9 55 355 8 302 6.89e-18 83.6
Msa0616300 AT1G14120.1 26.537 309 205 9 55 355 8 302 6.89e-18 83.6
Msa0616300 AT1G14120.3 26.537 309 205 9 55 355 8 302 6.89e-18 83.6
Msa0616300 AT4G23340.2 35.838 173 98 5 180 347 20 184 1.18e-17 80.9
Msa0616300 AT1G35190.2 30.651 261 128 12 68 303 23 255 4.46e-17 81.3
Msa0616300 AT4G16765.3 31.884 207 114 9 151 345 42 233 2.25e-16 77.8
Msa0616300 AT1G35190.1 29.278 263 152 11 68 303 23 278 4.10e-16 78.6
Msa0616300 AT1G52800.1 25.869 259 174 9 77 328 38 285 7.66e-16 77.8
Msa0616300 AT1G28030.1 28.378 296 195 11 45 328 3 293 2.10e-15 76.6
Msa0616300 AT4G03070.1 26.797 306 188 12 55 339 14 304 1.36e-13 71.2
Msa0616300 AT4G16770.1 29.858 211 127 9 77 269 42 249 1.93e-13 70.1
Msa0616300 AT4G22870.1 42.857 84 47 1 245 327 2 85 2.82e-13 66.2
Msa0616300 AT5G58660.2 25.287 261 148 9 54 282 33 278 6.16e-13 68.9
Msa0616300 AT4G16765.5 35.833 120 70 3 226 340 77 194 6.64e-13 67.4
Msa0616300 AT3G46500.4 26.984 189 125 6 170 350 1 184 1.32e-12 66.2
Msa0616300 AT4G22870.2 40.230 87 48 2 245 327 40 126 1.07e-11 62.8

Find 71 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTTCATATCTATCTTTA+TGG 0.119474 4_2:+66094003 None:intergenic
TCCAATTTCTGCTTCAAATT+TGG 0.136100 4_2:+66093186 None:intergenic
ACCAAATTTGAAGCAGAAAT+TGG 0.176209 4_2:-66093187 Msa0616300:CDS
GAGAGCACTCATTCAATTCT+TGG 0.207479 4_2:-66094964 Msa0616300:CDS
AGGATTGAGGGTTCTTTATC+TGG 0.219371 4_2:+66094883 None:intergenic
ACCATCCTTAATCAGCTTAA+TGG 0.230605 4_2:-66093866 Msa0616300:CDS
CAACTCCATTAAGCTGATTA+AGG 0.246921 4_2:+66093861 None:intergenic
TCATTCAATTCTTGGTGTTA+TGG 0.254788 4_2:-66094956 Msa0616300:CDS
AGATGATGCCATGTTGATTT+TGG 0.256096 4_2:+66095005 None:intergenic
AGATTAAGAAAGATGGAGTT+TGG 0.278559 4_2:-66093829 Msa0616300:CDS
CAAAGATTGGGGTTTCTTCC+AGG 0.305283 4_2:-66094761 Msa0616300:intron
TTTGTTCAAAAGCATGTTGA+TGG 0.327425 4_2:-66093128 Msa0616300:CDS
TGTGGCTTTCTTCTTGCAAT+AGG 0.330734 4_2:+66094304 None:intergenic
GAACTTATCAAACTCTTTGC+TGG 0.345699 4_2:+66093163 None:intergenic
CATCGACAAGCTCCGGTTGC+GGG 0.347018 4_2:+66093921 None:intergenic
AGTGATTAATAAACCCGAAA+TGG 0.356205 4_2:-66094929 Msa0616300:CDS
TATTCTCAGCATGCAAAGAT+TGG 0.378321 4_2:-66094774 Msa0616300:CDS
ATGATGGCAATCAATCAATA+AGG 0.380789 4_2:-66093964 Msa0616300:CDS
AGGGATTGGTTTCATTTGAT+AGG 0.395413 4_2:+66094863 None:intergenic
ATTCTCAGCATGCAAAGATT+GGG 0.402514 4_2:-66094773 Msa0616300:CDS
ACAAGCTCCGGTTGCGGGCA+TGG 0.426562 4_2:+66093926 None:intergenic
GGACTAGAGATTAAGAAAGA+TGG 0.432535 4_2:-66093836 Msa0616300:CDS
GGGAATTGATTGCAAGGGAT+TGG 0.443437 4_2:+66094849 None:intergenic
CTATCCGCCATGCCCGCAAC+CGG 0.448538 4_2:-66093933 Msa0616300:CDS
GTTTCATTTGATAGGATTGA+GGG 0.453458 4_2:+66094871 None:intergenic
AGTATTGTCACCACATATCA+AGG 0.455503 4_2:+66094810 None:intergenic
AATCAGCTTAATGGAGTTGA+AGG 0.457519 4_2:-66093857 Msa0616300:CDS
GATAAGCACCTTAGTGATGA+TGG 0.459040 4_2:+66094265 None:intergenic
GTGATTAATAAACCCGAAAT+GGG 0.460139 4_2:-66094928 Msa0616300:CDS
ATATTAACTACAAAAGCATC+TGG 0.461880 4_2:+66093788 None:intergenic
GGTTTCATTTGATAGGATTG+AGG 0.471046 4_2:+66094870 None:intergenic
ATCTTAGAATTGAAGAAACT+TGG 0.471265 4_2:-66094055 Msa0616300:CDS
TACAAAAGCATCTGGAAGAA+AGG 0.481736 4_2:+66093796 None:intergenic
ATGCCGGAGCCGTCGGAGTG+AGG 0.487266 4_2:+66093890 None:intergenic
TCTAAATGGGAAGACAAACT+TGG 0.498065 4_2:-66093074 Msa0616300:CDS
AATCAACATGGCATCATCTC+AGG 0.499386 4_2:-66095001 Msa0616300:exon
AGCCATAAAGATAGATATGA+AGG 0.506134 4_2:-66094005 Msa0616300:CDS
AACCCTCACTCCGACGGCTC+CGG 0.507522 4_2:-66093893 Msa0616300:CDS
AGTTAATATTGGAGACATCA+TGG 0.510828 4_2:-66093774 Msa0616300:CDS
GGATTGAGGGTTCTTTATCT+GGG 0.512187 4_2:+66094884 None:intergenic
TGCCGGAGCCGTCGGAGTGA+GGG 0.514870 4_2:+66093891 None:intergenic
GACTTTCAAACCTTGATATG+TGG 0.523264 4_2:-66094820 Msa0616300:CDS
CCATCGACAAGCTCCGGTTG+CGG 0.523575 4_2:+66093920 None:intergenic
CTGATTAAGGATGGTTATGC+CGG 0.526310 4_2:+66093874 None:intergenic
GTAGAGAATATGTTTGATGA+TGG 0.535170 4_2:-66093980 Msa0616300:CDS
AGACAAACTTGGAGAGGATG+AGG 0.539827 4_2:-66093063 Msa0616300:CDS
GGTTTCAGTAAACAAAGAAA+AGG 0.544690 4_2:-66093239 Msa0616300:CDS
GATGGTTATGCCGGAGCCGT+CGG 0.550223 4_2:+66093883 None:intergenic
TTGATGCCATCGACAAGCTC+CGG 0.550885 4_2:+66093914 None:intergenic
TCCATTAAGCTGATTAAGGA+TGG 0.551241 4_2:+66093865 None:intergenic
CTCAACTCCCATCATCACTA+AGG 0.551331 4_2:-66094273 Msa0616300:intron
TCTACTCTAGCATAGAGCAC+AGG 0.552312 4_2:-66093261 Msa0616300:CDS
GCATATGTGAAGGGATACCT+TGG 0.558232 4_2:-66094086 Msa0616300:intron
TTCTCAGCATGCAAAGATTG+GGG 0.568244 4_2:-66094772 Msa0616300:CDS
CTTAGTGATGATGGGAGTTG+AGG 0.569423 4_2:+66094274 None:intergenic
CCGCAACCGGAGCTTGTCGA+TGG 0.579043 4_2:-66093920 Msa0616300:CDS
GGAGCTGTCATTAGATGTGA+AGG 0.581827 4_2:-66094370 Msa0616300:CDS
TTCTAAGATATATGACTCCA+AGG 0.586022 4_2:+66094069 None:intergenic
ATAAGCACCTTAGTGATGAT+GGG 0.587837 4_2:+66094266 None:intergenic
TATATGCAGGTGGTGAATCA+CGG 0.608081 4_2:-66094505 Msa0616300:intron
GCATCTGGAAGAAAGGTCAC+AGG 0.608787 4_2:+66093803 None:intergenic
CTACTCTAGCATAGAGCACA+GGG 0.608995 4_2:-66093260 Msa0616300:CDS
ATGGGAAGACAAACTTGGAG+AGG 0.618024 4_2:-66093069 Msa0616300:CDS
AAAACGGGAATTGATTGCAA+GGG 0.620044 4_2:+66094844 None:intergenic
GGCATCAACCCTCACTCCGA+CGG 0.622191 4_2:-66093899 Msa0616300:CDS
AGCTCCGGTTGCGGGCATGG+CGG 0.640748 4_2:+66093929 None:intergenic
CAACATGGCATCATCTCAGG+TGG 0.641861 4_2:-66094998 Msa0616300:exon
TTTACAGATTCTAAGCAATG+GGG 0.672405 4_2:-66093284 Msa0616300:intron
ACAAAATACAAAATAAGACA+AGG 0.680547 4_2:-66094409 Msa0616300:CDS
ATAACAAACCAAAATCAACA+TGG 0.724818 4_2:-66095013 Msa0616300:exon
TAATATTGGAGACATCATGG+AGG 0.754731 4_2:-66093771 Msa0616300:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAATATATATCTTAAAAAT+TGG - chr4_2:66093418-66093437 Msa0616300:intron 10.0%
!!! TTGCATTTTTTTTTTTTTTA+TGG - chr4_2:66093511-66093530 Msa0616300:intron 10.0%
!! ATAATATATAGTATCTAATT+AGG + chr4_2:66093941-66093960 None:intergenic 10.0%
!! TGAATATATATCTTAAAAAT+TGG - chr4_2:66093418-66093437 Msa0616300:intron 10.0%
!!! TTGCATTTTTTTTTTTTTTA+TGG - chr4_2:66093511-66093530 Msa0616300:intron 10.0%
!! ATAATATATAGTATCTAATT+AGG + chr4_2:66093941-66093960 None:intergenic 10.0%
!! AGTTGAATAAAAATTACATA+TGG + chr4_2:66093890-66093909 None:intergenic 15.0%
!! ATTTATATAATAGGTATAGT+AGG + chr4_2:66094413-66094432 None:intergenic 15.0%
!!! TTATCTTTTTGATACAATAA+TGG + chr4_2:66094509-66094528 None:intergenic 15.0%
!!! ATTTCTTGAAAAAAAGTATT+TGG + chr4_2:66094977-66094996 None:intergenic 15.0%
!!! TTTTTTTCAAGAAATCTAAA+TGG - chr4_2:66094982-66095001 Msa0616300:CDS 15.0%
!!! TTTTTTCAAGAAATCTAAAT+GGG - chr4_2:66094983-66095002 Msa0616300:CDS 15.0%
!! AGTTGAATAAAAATTACATA+TGG + chr4_2:66093890-66093909 None:intergenic 15.0%
!! ATTTATATAATAGGTATAGT+AGG + chr4_2:66094413-66094432 None:intergenic 15.0%
!!! TTATCTTTTTGATACAATAA+TGG + chr4_2:66094509-66094528 None:intergenic 15.0%
!!! ATTTCTTGAAAAAAAGTATT+TGG + chr4_2:66094977-66094996 None:intergenic 15.0%
!!! TTTTTTTCAAGAAATCTAAA+TGG - chr4_2:66094982-66095001 Msa0616300:CDS 15.0%
!!! TTTTTTCAAGAAATCTAAAT+GGG - chr4_2:66094983-66095002 Msa0616300:CDS 15.0%
!! ACAAAATACAAAATAAGACA+AGG - chr4_2:66093661-66093680 Msa0616300:intron 20.0%
!!! ATGACACTTTTTGAATTATT+GGG - chr4_2:66094039-66094058 Msa0616300:CDS 20.0%
!!! CAATAAAAAATGTGCTATTT+AGG + chr4_2:66094594-66094613 None:intergenic 20.0%
!!! CTAAATAGCACATTTTTTAT+TGG - chr4_2:66094592-66094611 Msa0616300:intron 20.0%
!!! TTTTAATAACTCTCTTCTTA+GGG - chr4_2:66094658-66094677 Msa0616300:intron 20.0%
!!! ATATCTTTAACTCATGTTTT+GGG - chr4_2:66094759-66094778 Msa0616300:intron 20.0%
!! ACAAAATACAAAATAAGACA+AGG - chr4_2:66093661-66093680 Msa0616300:intron 20.0%
!!! ATGACACTTTTTGAATTATT+GGG - chr4_2:66094039-66094058 Msa0616300:CDS 20.0%
!!! CAATAAAAAATGTGCTATTT+AGG + chr4_2:66094594-66094613 None:intergenic 20.0%
!!! CTAAATAGCACATTTTTTAT+TGG - chr4_2:66094592-66094611 Msa0616300:intron 20.0%
!!! TTTTAATAACTCTCTTCTTA+GGG - chr4_2:66094658-66094677 Msa0616300:intron 20.0%
!!! ATATCTTTAACTCATGTTTT+GGG - chr4_2:66094759-66094778 Msa0616300:intron 20.0%
! ATAACAAACCAAAATCAACA+TGG - chr4_2:66093057-66093076 Msa0616300:CDS 25.0%
! TGAACTCTAATTTATAAACC+TGG + chr4_2:66093330-66093349 None:intergenic 25.0%
! AAATTGATGCAATTATATGC+AGG - chr4_2:66093552-66093571 Msa0616300:intron 25.0%
!!! TATTTTGTTTTCTCTTCAAC+AGG + chr4_2:66093649-66093668 None:intergenic 25.0%
!! ATTTTTGTATGCATATGTGA+AGG - chr4_2:66093974-66093993 Msa0616300:CDS 25.0%
!! TTTTTGTATGCATATGTGAA+GGG - chr4_2:66093975-66093994 Msa0616300:CDS 25.0%
! ATCTTAGAATTGAAGAAACT+TGG - chr4_2:66094015-66094034 Msa0616300:CDS 25.0%
!!! CATGACACTTTTTGAATTAT+TGG - chr4_2:66094038-66094057 Msa0616300:CDS 25.0%
! TTCCTTCATATCTATCTTTA+TGG + chr4_2:66094070-66094089 None:intergenic 25.0%
!!! ATATTAACTACAAAAGCATC+TGG + chr4_2:66094285-66094304 None:intergenic 25.0%
!! GATGCTTTTGTAGTTAATAT+TGG - chr4_2:66094285-66094304 Msa0616300:CDS 25.0%
! TGTAATAATGGCATTATTTG+TGG - chr4_2:66094552-66094571 Msa0616300:intron 25.0%
! CTAAGAAGAGAGTTATTAAA+AGG + chr4_2:66094659-66094678 None:intergenic 25.0%
!! CTTTTAATAACTCTCTTCTT+AGG - chr4_2:66094657-66094676 Msa0616300:intron 25.0%
! CTTAGGGTTTCATTAAAAAA+TGG - chr4_2:66094674-66094693 Msa0616300:intron 25.0%
!! CATATCTTTAACTCATGTTT+TGG - chr4_2:66094758-66094777 Msa0616300:intron 25.0%
!! ATTTTACAGATTCTAAGCAA+TGG - chr4_2:66094784-66094803 Msa0616300:CDS 25.0%
!! TTTTACAGATTCTAAGCAAT+GGG - chr4_2:66094785-66094804 Msa0616300:CDS 25.0%
! ATAACAAACCAAAATCAACA+TGG - chr4_2:66093057-66093076 Msa0616300:CDS 25.0%
! TGAACTCTAATTTATAAACC+TGG + chr4_2:66093330-66093349 None:intergenic 25.0%
! AAATTGATGCAATTATATGC+AGG - chr4_2:66093552-66093571 Msa0616300:intron 25.0%
!!! TATTTTGTTTTCTCTTCAAC+AGG + chr4_2:66093649-66093668 None:intergenic 25.0%
!! ATTTTTGTATGCATATGTGA+AGG - chr4_2:66093974-66093993 Msa0616300:CDS 25.0%
!! TTTTTGTATGCATATGTGAA+GGG - chr4_2:66093975-66093994 Msa0616300:CDS 25.0%
! ATCTTAGAATTGAAGAAACT+TGG - chr4_2:66094015-66094034 Msa0616300:CDS 25.0%
!!! CATGACACTTTTTGAATTAT+TGG - chr4_2:66094038-66094057 Msa0616300:CDS 25.0%
! TTCCTTCATATCTATCTTTA+TGG + chr4_2:66094070-66094089 None:intergenic 25.0%
!!! ATATTAACTACAAAAGCATC+TGG + chr4_2:66094285-66094304 None:intergenic 25.0%
!! GATGCTTTTGTAGTTAATAT+TGG - chr4_2:66094285-66094304 Msa0616300:CDS 25.0%
! TGTAATAATGGCATTATTTG+TGG - chr4_2:66094552-66094571 Msa0616300:intron 25.0%
! CTAAGAAGAGAGTTATTAAA+AGG + chr4_2:66094659-66094678 None:intergenic 25.0%
!! CTTTTAATAACTCTCTTCTT+AGG - chr4_2:66094657-66094676 Msa0616300:intron 25.0%
! CTTAGGGTTTCATTAAAAAA+TGG - chr4_2:66094674-66094693 Msa0616300:intron 25.0%
!! CATATCTTTAACTCATGTTT+TGG - chr4_2:66094758-66094777 Msa0616300:intron 25.0%
!! ATTTTACAGATTCTAAGCAA+TGG - chr4_2:66094784-66094803 Msa0616300:CDS 25.0%
!! TTTTACAGATTCTAAGCAAT+GGG - chr4_2:66094785-66094804 Msa0616300:CDS 25.0%
!! TCATTCAATTCTTGGTGTTA+TGG - chr4_2:66093114-66093133 Msa0616300:CDS 30.0%
AGTGATTAATAAACCCGAAA+TGG - chr4_2:66093141-66093160 Msa0616300:CDS 30.0%
GTGATTAATAAACCCGAAAT+GGG - chr4_2:66093142-66093161 Msa0616300:CDS 30.0%
!!! ATTTTTGGTATTCCCATTTC+GGG + chr4_2:66093157-66093176 None:intergenic 30.0%
!!! CATTTTTGGTATTCCCATTT+CGG + chr4_2:66093158-66093177 None:intergenic 30.0%
GTTTCATTTGATAGGATTGA+GGG + chr4_2:66093202-66093221 None:intergenic 30.0%
AAGGTTTGAAAGTCAAAAAC+GGG + chr4_2:66093244-66093263 None:intergenic 30.0%
CAAGGTTTGAAAGTCAAAAA+CGG + chr4_2:66093245-66093264 None:intergenic 30.0%
ACAGGAAGCTTGAAAAAATT+TGG + chr4_2:66093631-66093650 None:intergenic 30.0%
! ATAAGACAAGGAGATTTTCA+AGG - chr4_2:66093673-66093692 Msa0616300:intron 30.0%
TGAAGGTCAAAAACTTGATT+GGG - chr4_2:66093717-66093736 Msa0616300:intron 30.0%
!! TTCTAAGATATATGACTCCA+AGG + chr4_2:66094004-66094023 None:intergenic 30.0%
AGCCATAAAGATAGATATGA+AGG - chr4_2:66094065-66094084 Msa0616300:CDS 30.0%
GTAGAGAATATGTTTGATGA+TGG - chr4_2:66094090-66094109 Msa0616300:intron 30.0%
ATGATGGCAATCAATCAATA+AGG - chr4_2:66094106-66094125 Msa0616300:intron 30.0%
AGATTAAGAAAGATGGAGTT+TGG - chr4_2:66094241-66094260 Msa0616300:intron 30.0%
AGTTAATATTGGAGACATCA+TGG - chr4_2:66094296-66094315 Msa0616300:CDS 30.0%
! TAGTATTTTCAATGAGTCGT+GGG - chr4_2:66094470-66094489 Msa0616300:CDS 30.0%
TTATTACACCATAACACATG+TGG + chr4_2:66094540-66094559 None:intergenic 30.0%
CATGTGTTATGGTGTAATAA+TGG - chr4_2:66094540-66094559 Msa0616300:intron 30.0%
! CTATTTAGGAGCATATTGAA+TGG + chr4_2:66094580-66094599 None:intergenic 30.0%
GAGTTATTAAAAGGAAGATG+AGG + chr4_2:66094650-66094669 None:intergenic 30.0%
TTTACAGATTCTAAGCAATG+GGG - chr4_2:66094786-66094805 Msa0616300:CDS 30.0%
GGTTTCAGTAAACAAAGAAA+AGG - chr4_2:66094831-66094850 Msa0616300:CDS 30.0%
! ACCAAATTTGAAGCAGAAAT+TGG - chr4_2:66094883-66094902 Msa0616300:CDS 30.0%
TCCAATTTCTGCTTCAAATT+TGG + chr4_2:66094887-66094906 None:intergenic 30.0%
! ATCAACATGCTTTTGAACAA+AGG + chr4_2:66094943-66094962 None:intergenic 30.0%
! TTTGTTCAAAAGCATGTTGA+TGG - chr4_2:66094942-66094961 Msa0616300:CDS 30.0%
!! TCATTCAATTCTTGGTGTTA+TGG - chr4_2:66093114-66093133 Msa0616300:CDS 30.0%
AGTGATTAATAAACCCGAAA+TGG - chr4_2:66093141-66093160 Msa0616300:CDS 30.0%
GTGATTAATAAACCCGAAAT+GGG - chr4_2:66093142-66093161 Msa0616300:CDS 30.0%
!!! ATTTTTGGTATTCCCATTTC+GGG + chr4_2:66093157-66093176 None:intergenic 30.0%
!!! CATTTTTGGTATTCCCATTT+CGG + chr4_2:66093158-66093177 None:intergenic 30.0%
GTTTCATTTGATAGGATTGA+GGG + chr4_2:66093202-66093221 None:intergenic 30.0%
AAGGTTTGAAAGTCAAAAAC+GGG + chr4_2:66093244-66093263 None:intergenic 30.0%
CAAGGTTTGAAAGTCAAAAA+CGG + chr4_2:66093245-66093264 None:intergenic 30.0%
ACAGGAAGCTTGAAAAAATT+TGG + chr4_2:66093631-66093650 None:intergenic 30.0%
! ATAAGACAAGGAGATTTTCA+AGG - chr4_2:66093673-66093692 Msa0616300:intron 30.0%
TGAAGGTCAAAAACTTGATT+GGG - chr4_2:66093717-66093736 Msa0616300:intron 30.0%
!! TTCTAAGATATATGACTCCA+AGG + chr4_2:66094004-66094023 None:intergenic 30.0%
AGCCATAAAGATAGATATGA+AGG - chr4_2:66094065-66094084 Msa0616300:CDS 30.0%
GTAGAGAATATGTTTGATGA+TGG - chr4_2:66094090-66094109 Msa0616300:intron 30.0%
ATGATGGCAATCAATCAATA+AGG - chr4_2:66094106-66094125 Msa0616300:intron 30.0%
AGATTAAGAAAGATGGAGTT+TGG - chr4_2:66094241-66094260 Msa0616300:intron 30.0%
AGTTAATATTGGAGACATCA+TGG - chr4_2:66094296-66094315 Msa0616300:CDS 30.0%
! TAGTATTTTCAATGAGTCGT+GGG - chr4_2:66094470-66094489 Msa0616300:CDS 30.0%
TTATTACACCATAACACATG+TGG + chr4_2:66094540-66094559 None:intergenic 30.0%
CATGTGTTATGGTGTAATAA+TGG - chr4_2:66094540-66094559 Msa0616300:intron 30.0%
! CTATTTAGGAGCATATTGAA+TGG + chr4_2:66094580-66094599 None:intergenic 30.0%
GAGTTATTAAAAGGAAGATG+AGG + chr4_2:66094650-66094669 None:intergenic 30.0%
TTTACAGATTCTAAGCAATG+GGG - chr4_2:66094786-66094805 Msa0616300:CDS 30.0%
GGTTTCAGTAAACAAAGAAA+AGG - chr4_2:66094831-66094850 Msa0616300:CDS 30.0%
! ACCAAATTTGAAGCAGAAAT+TGG - chr4_2:66094883-66094902 Msa0616300:CDS 30.0%
TCCAATTTCTGCTTCAAATT+TGG + chr4_2:66094887-66094906 None:intergenic 30.0%
! ATCAACATGCTTTTGAACAA+AGG + chr4_2:66094943-66094962 None:intergenic 30.0%
! TTTGTTCAAAAGCATGTTGA+TGG - chr4_2:66094942-66094961 Msa0616300:CDS 30.0%
!!! AGATGATGCCATGTTGATTT+TGG + chr4_2:66093068-66093087 None:intergenic 35.0%
GGTTTCATTTGATAGGATTG+AGG + chr4_2:66093203-66093222 None:intergenic 35.0%
!! AGGGATTGGTTTCATTTGAT+AGG + chr4_2:66093210-66093229 None:intergenic 35.0%
AAAACGGGAATTGATTGCAA+GGG + chr4_2:66093229-66093248 None:intergenic 35.0%
AAAAACGGGAATTGATTGCA+AGG + chr4_2:66093230-66093249 None:intergenic 35.0%
GACTTTCAAACCTTGATATG+TGG - chr4_2:66093250-66093269 Msa0616300:CDS 35.0%
AGTATTGTCACCACATATCA+AGG + chr4_2:66093263-66093282 None:intergenic 35.0%
TATTCTCAGCATGCAAAGAT+TGG - chr4_2:66093296-66093315 Msa0616300:intron 35.0%
ATTCTCAGCATGCAAAGATT+GGG - chr4_2:66093297-66093316 Msa0616300:intron 35.0%
TTGATGCAATTATATGCAGG+TGG - chr4_2:66093555-66093574 Msa0616300:intron 35.0%
!! CAAGGAGATTTTCAAGGTTA+TGG - chr4_2:66093679-66093698 Msa0616300:intron 35.0%
GTGAAGGTCAAAAACTTGAT+TGG - chr4_2:66093716-66093735 Msa0616300:intron 35.0%
GAAGGTCAAAAACTTGATTG+GGG - chr4_2:66093718-66093737 Msa0616300:intron 35.0%
ATAAGCACCTTAGTGATGAT+GGG + chr4_2:66093807-66093826 None:intergenic 35.0%
ACCATCCTTAATCAGCTTAA+TGG - chr4_2:66094204-66094223 Msa0616300:intron 35.0%
TCCATTAAGCTGATTAAGGA+TGG + chr4_2:66094208-66094227 None:intergenic 35.0%
CAACTCCATTAAGCTGATTA+AGG + chr4_2:66094212-66094231 None:intergenic 35.0%
AATCAGCTTAATGGAGTTGA+AGG - chr4_2:66094213-66094232 Msa0616300:intron 35.0%
GGACTAGAGATTAAGAAAGA+TGG - chr4_2:66094234-66094253 Msa0616300:intron 35.0%
!! TACAAAAGCATCTGGAAGAA+AGG + chr4_2:66094277-66094296 None:intergenic 35.0%
TAATATTGGAGACATCATGG+AGG - chr4_2:66094299-66094318 Msa0616300:CDS 35.0%
TGACAATGAAATAAAGCACG+TGG - chr4_2:66094372-66094391 Msa0616300:CDS 35.0%
ATAATAGGTATAGTAGGACC+TGG + chr4_2:66094407-66094426 None:intergenic 35.0%
! GTAGTATTTTCAATGAGTCG+TGG - chr4_2:66094469-66094488 Msa0616300:CDS 35.0%
TGCTAAATCCACATGTGTTA+TGG - chr4_2:66094529-66094548 Msa0616300:intron 35.0%
TTAAAAGGAAGATGAGGCAT+GGG + chr4_2:66094644-66094663 None:intergenic 35.0%
ATTAAAAGGAAGATGAGGCA+TGG + chr4_2:66094645-66094664 None:intergenic 35.0%
GAACTTATCAAACTCTTTGC+TGG + chr4_2:66094910-66094929 None:intergenic 35.0%
! AACATGCTTTTGAACAAAGG+TGG + chr4_2:66094940-66094959 None:intergenic 35.0%
TCTAAATGGGAAGACAAACT+TGG - chr4_2:66094996-66095015 Msa0616300:CDS 35.0%
!!! AGATGATGCCATGTTGATTT+TGG + chr4_2:66093068-66093087 None:intergenic 35.0%
GGTTTCATTTGATAGGATTG+AGG + chr4_2:66093203-66093222 None:intergenic 35.0%
!! AGGGATTGGTTTCATTTGAT+AGG + chr4_2:66093210-66093229 None:intergenic 35.0%
AAAACGGGAATTGATTGCAA+GGG + chr4_2:66093229-66093248 None:intergenic 35.0%
AAAAACGGGAATTGATTGCA+AGG + chr4_2:66093230-66093249 None:intergenic 35.0%
GACTTTCAAACCTTGATATG+TGG - chr4_2:66093250-66093269 Msa0616300:CDS 35.0%
AGTATTGTCACCACATATCA+AGG + chr4_2:66093263-66093282 None:intergenic 35.0%
TATTCTCAGCATGCAAAGAT+TGG - chr4_2:66093296-66093315 Msa0616300:intron 35.0%
ATTCTCAGCATGCAAAGATT+GGG - chr4_2:66093297-66093316 Msa0616300:intron 35.0%
TTGATGCAATTATATGCAGG+TGG - chr4_2:66093555-66093574 Msa0616300:intron 35.0%
!! CAAGGAGATTTTCAAGGTTA+TGG - chr4_2:66093679-66093698 Msa0616300:intron 35.0%
GTGAAGGTCAAAAACTTGAT+TGG - chr4_2:66093716-66093735 Msa0616300:intron 35.0%
GAAGGTCAAAAACTTGATTG+GGG - chr4_2:66093718-66093737 Msa0616300:intron 35.0%
ATAAGCACCTTAGTGATGAT+GGG + chr4_2:66093807-66093826 None:intergenic 35.0%
ACCATCCTTAATCAGCTTAA+TGG - chr4_2:66094204-66094223 Msa0616300:intron 35.0%
TCCATTAAGCTGATTAAGGA+TGG + chr4_2:66094208-66094227 None:intergenic 35.0%
CAACTCCATTAAGCTGATTA+AGG + chr4_2:66094212-66094231 None:intergenic 35.0%
AATCAGCTTAATGGAGTTGA+AGG - chr4_2:66094213-66094232 Msa0616300:intron 35.0%
GGACTAGAGATTAAGAAAGA+TGG - chr4_2:66094234-66094253 Msa0616300:intron 35.0%
!! TACAAAAGCATCTGGAAGAA+AGG + chr4_2:66094277-66094296 None:intergenic 35.0%
TAATATTGGAGACATCATGG+AGG - chr4_2:66094299-66094318 Msa0616300:CDS 35.0%
TGACAATGAAATAAAGCACG+TGG - chr4_2:66094372-66094391 Msa0616300:CDS 35.0%
ATAATAGGTATAGTAGGACC+TGG + chr4_2:66094407-66094426 None:intergenic 35.0%
! GTAGTATTTTCAATGAGTCG+TGG - chr4_2:66094469-66094488 Msa0616300:CDS 35.0%
TGCTAAATCCACATGTGTTA+TGG - chr4_2:66094529-66094548 Msa0616300:intron 35.0%
TTAAAAGGAAGATGAGGCAT+GGG + chr4_2:66094644-66094663 None:intergenic 35.0%
ATTAAAAGGAAGATGAGGCA+TGG + chr4_2:66094645-66094664 None:intergenic 35.0%
GAACTTATCAAACTCTTTGC+TGG + chr4_2:66094910-66094929 None:intergenic 35.0%
! AACATGCTTTTGAACAAAGG+TGG + chr4_2:66094940-66094959 None:intergenic 35.0%
TCTAAATGGGAAGACAAACT+TGG - chr4_2:66094996-66095015 Msa0616300:CDS 35.0%
AATCAACATGGCATCATCTC+AGG - chr4_2:66093069-66093088 Msa0616300:CDS 40.0%
!! GAGAGCACTCATTCAATTCT+TGG - chr4_2:66093106-66093125 Msa0616300:CDS 40.0%
! TCTGGGCGAAGAAACATTTT+TGG + chr4_2:66093172-66093191 None:intergenic 40.0%
GGATTGAGGGTTCTTTATCT+GGG + chr4_2:66093189-66093208 None:intergenic 40.0%
AGGATTGAGGGTTCTTTATC+TGG + chr4_2:66093190-66093209 None:intergenic 40.0%
TTCTCAGCATGCAAAGATTG+GGG - chr4_2:66093298-66093317 Msa0616300:intron 40.0%
TATATGCAGGTGGTGAATCA+CGG - chr4_2:66093565-66093584 Msa0616300:intron 40.0%
TGTGGCTTTCTTCTTGCAAT+AGG + chr4_2:66093769-66093788 None:intergenic 40.0%
GATAAGCACCTTAGTGATGA+TGG + chr4_2:66093808-66093827 None:intergenic 40.0%
CTGATTAAGGATGGTTATGC+CGG + chr4_2:66094199-66094218 None:intergenic 40.0%
AATCAACATGGCATCATCTC+AGG - chr4_2:66093069-66093088 Msa0616300:CDS 40.0%
!! GAGAGCACTCATTCAATTCT+TGG - chr4_2:66093106-66093125 Msa0616300:CDS 40.0%
! TCTGGGCGAAGAAACATTTT+TGG + chr4_2:66093172-66093191 None:intergenic 40.0%
GGATTGAGGGTTCTTTATCT+GGG + chr4_2:66093189-66093208 None:intergenic 40.0%
AGGATTGAGGGTTCTTTATC+TGG + chr4_2:66093190-66093209 None:intergenic 40.0%
TTCTCAGCATGCAAAGATTG+GGG - chr4_2:66093298-66093317 Msa0616300:intron 40.0%
TATATGCAGGTGGTGAATCA+CGG - chr4_2:66093565-66093584 Msa0616300:intron 40.0%
TGTGGCTTTCTTCTTGCAAT+AGG + chr4_2:66093769-66093788 None:intergenic 40.0%
GATAAGCACCTTAGTGATGA+TGG + chr4_2:66093808-66093827 None:intergenic 40.0%
CTGATTAAGGATGGTTATGC+CGG + chr4_2:66094199-66094218 None:intergenic 40.0%
GGGAATTGATTGCAAGGGAT+TGG + chr4_2:66093224-66093243 None:intergenic 45.0%
CAAAGATTGGGGTTTCTTCC+AGG - chr4_2:66093309-66093328 Msa0616300:intron 45.0%
GGAGCTGTCATTAGATGTGA+AGG - chr4_2:66093700-66093719 Msa0616300:intron 45.0%
GGGAGTTGAGGAAAAAGATG+TGG + chr4_2:66093787-66093806 None:intergenic 45.0%
!! CTTAGTGATGATGGGAGTTG+AGG + chr4_2:66093799-66093818 None:intergenic 45.0%
CTCAACTCCCATCATCACTA+AGG - chr4_2:66093797-66093816 Msa0616300:CDS 45.0%
GCATATGTGAAGGGATACCT+TGG - chr4_2:66093984-66094003 Msa0616300:CDS 45.0%
TCTACTCTAGCATAGAGCAC+AGG - chr4_2:66094809-66094828 Msa0616300:CDS 45.0%
CTACTCTAGCATAGAGCACA+GGG - chr4_2:66094810-66094829 Msa0616300:CDS 45.0%
ATGGGAAGACAAACTTGGAG+AGG - chr4_2:66095001-66095020 Msa0616300:exon 45.0%
AGACAAACTTGGAGAGGATG+AGG - chr4_2:66095007-66095026 Msa0616300:exon 45.0%
GGGAATTGATTGCAAGGGAT+TGG + chr4_2:66093224-66093243 None:intergenic 45.0%
CAAAGATTGGGGTTTCTTCC+AGG - chr4_2:66093309-66093328 Msa0616300:intron 45.0%
GGAGCTGTCATTAGATGTGA+AGG - chr4_2:66093700-66093719 Msa0616300:intron 45.0%
GGGAGTTGAGGAAAAAGATG+TGG + chr4_2:66093787-66093806 None:intergenic 45.0%
!! CTTAGTGATGATGGGAGTTG+AGG + chr4_2:66093799-66093818 None:intergenic 45.0%
CTCAACTCCCATCATCACTA+AGG - chr4_2:66093797-66093816 Msa0616300:CDS 45.0%
GCATATGTGAAGGGATACCT+TGG - chr4_2:66093984-66094003 Msa0616300:CDS 45.0%
TCTACTCTAGCATAGAGCAC+AGG - chr4_2:66094809-66094828 Msa0616300:CDS 45.0%
CTACTCTAGCATAGAGCACA+GGG - chr4_2:66094810-66094829 Msa0616300:CDS 45.0%
ATGGGAAGACAAACTTGGAG+AGG - chr4_2:66095001-66095020 Msa0616300:exon 45.0%
AGACAAACTTGGAGAGGATG+AGG - chr4_2:66095007-66095026 Msa0616300:exon 45.0%
!! ATCAAATTAATTTATATAAT+AGG + chr4_2:66094422-66094441 None:intergenic 5.0%
!! ATCAAATTAATTTATATAAT+AGG + chr4_2:66094422-66094441 None:intergenic 5.0%
CAACATGGCATCATCTCAGG+TGG - chr4_2:66093072-66093091 Msa0616300:CDS 50.0%
TTGATGCCATCGACAAGCTC+CGG + chr4_2:66094159-66094178 None:intergenic 50.0%
GCATCTGGAAGAAAGGTCAC+AGG + chr4_2:66094270-66094289 None:intergenic 50.0%
AGCACGTGGTGTATTGAACC+AGG - chr4_2:66094386-66094405 Msa0616300:CDS 50.0%
CAACATGGCATCATCTCAGG+TGG - chr4_2:66093072-66093091 Msa0616300:CDS 50.0%
TTGATGCCATCGACAAGCTC+CGG + chr4_2:66094159-66094178 None:intergenic 50.0%
GCATCTGGAAGAAAGGTCAC+AGG + chr4_2:66094270-66094289 None:intergenic 50.0%
AGCACGTGGTGTATTGAACC+AGG - chr4_2:66094386-66094405 Msa0616300:CDS 50.0%
CATCGACAAGCTCCGGTTGC+GGG + chr4_2:66094152-66094171 None:intergenic 60.0%
CCATCGACAAGCTCCGGTTG+CGG + chr4_2:66094153-66094172 None:intergenic 60.0%
GGCATCAACCCTCACTCCGA+CGG - chr4_2:66094171-66094190 Msa0616300:intron 60.0%
GATGGTTATGCCGGAGCCGT+CGG + chr4_2:66094190-66094209 None:intergenic 60.0%
CATCGACAAGCTCCGGTTGC+GGG + chr4_2:66094152-66094171 None:intergenic 60.0%
CCATCGACAAGCTCCGGTTG+CGG + chr4_2:66094153-66094172 None:intergenic 60.0%
GGCATCAACCCTCACTCCGA+CGG - chr4_2:66094171-66094190 Msa0616300:intron 60.0%
GATGGTTATGCCGGAGCCGT+CGG + chr4_2:66094190-66094209 None:intergenic 60.0%
CTATCCGCCATGCCCGCAAC+CGG - chr4_2:66094137-66094156 Msa0616300:intron 65.0%
ACAAGCTCCGGTTGCGGGCA+TGG + chr4_2:66094147-66094166 None:intergenic 65.0%
CCGCAACCGGAGCTTGTCGA+TGG - chr4_2:66094150-66094169 Msa0616300:intron 65.0%
AACCCTCACTCCGACGGCTC+CGG - chr4_2:66094177-66094196 Msa0616300:intron 65.0%
CTATCCGCCATGCCCGCAAC+CGG - chr4_2:66094137-66094156 Msa0616300:intron 65.0%
ACAAGCTCCGGTTGCGGGCA+TGG + chr4_2:66094147-66094166 None:intergenic 65.0%
CCGCAACCGGAGCTTGTCGA+TGG - chr4_2:66094150-66094169 Msa0616300:intron 65.0%
AACCCTCACTCCGACGGCTC+CGG - chr4_2:66094177-66094196 Msa0616300:intron 65.0%
AGCTCCGGTTGCGGGCATGG+CGG + chr4_2:66094144-66094163 None:intergenic 70.0%
TGCCGGAGCCGTCGGAGTGA+GGG + chr4_2:66094182-66094201 None:intergenic 70.0%
ATGCCGGAGCCGTCGGAGTG+AGG + chr4_2:66094183-66094202 None:intergenic 70.0%
AGCTCCGGTTGCGGGCATGG+CGG + chr4_2:66094144-66094163 None:intergenic 70.0%
TGCCGGAGCCGTCGGAGTGA+GGG + chr4_2:66094182-66094201 None:intergenic 70.0%
ATGCCGGAGCCGTCGGAGTG+AGG + chr4_2:66094183-66094202 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 66093057 66095035 66093057 ID=Msa0616300;Name=Msa0616300
chr4_2 mRNA 66093057 66095035 66093057 ID=Msa0616300-mRNA-1;Parent=Msa0616300;Name=Msa0616300-mRNA-1;_AED=0.09;_eAED=0.09;_QI=19|1|0.5|1|1|1|4|0|355
chr4_2 exon 66093057 66093299 66093057 ID=Msa0616300-mRNA-1:exon:18819;Parent=Msa0616300-mRNA-1
chr4_2 exon 66093772 66094096 66093772 ID=Msa0616300-mRNA-1:exon:18818;Parent=Msa0616300-mRNA-1
chr4_2 exon 66094274 66094518 66094274 ID=Msa0616300-mRNA-1:exon:18817;Parent=Msa0616300-mRNA-1
chr4_2 exon 66094762 66095035 66094762 ID=Msa0616300-mRNA-1:exon:18816;Parent=Msa0616300-mRNA-1
chr4_2 five_prime_UTR 66095017 66095035 66095017 ID=Msa0616300-mRNA-1:five_prime_utr;Parent=Msa0616300-mRNA-1
chr4_2 CDS 66094762 66095016 66094762 ID=Msa0616300-mRNA-1:cds;Parent=Msa0616300-mRNA-1
chr4_2 CDS 66094274 66094518 66094274 ID=Msa0616300-mRNA-1:cds;Parent=Msa0616300-mRNA-1
chr4_2 CDS 66093772 66094096 66093772 ID=Msa0616300-mRNA-1:cds;Parent=Msa0616300-mRNA-1
chr4_2 CDS 66093057 66093299 66093057 ID=Msa0616300-mRNA-1:cds;Parent=Msa0616300-mRNA-1
Gene Sequence

>Msa0616300

ATGGCATCATCTCAGGTGGCTAATATCTTTGAGAGCACTCATTCAATTCTTGGTGTTATGGATGAAGTGATTAATAAACCCGAAATGGGAATACCAAAAATGTTTCTTCGCCCAGATAAAGAACCCTCAATCCTATCAAATGAAACCAATCCCTTGCAATCAATTCCCGTTTTTGACTTTCAAACCTTGATATGTGGTGACAATACTGAACTTGACAAGTTATTCTCAGCATGCAAAGATTGGGGTTTCTTCCAGGTGGTGAATCACGGTATTAGCTCTGAATTGCTTGAGAAGCTGAAATTTGAGATTCCAAATTTTTTCAAGCTTCCTGTTGAAGAGAAAACAAAATACAAAATAAGACAAGGAGATTTTCAAGGTTATGGAGCTGTCATTAGATGTGAAGGTCAAAAACTTGATTGGGGTGACAGATTCTTCATGATTACAAATCCTATTGCAAGAAGAAAGCCACATCTTTTTCCTCAACTCCCATCATCACTAAGGGATACCTTGGAGTCATATATCTTAGAATTGAAGAAACTTGGCATGACACTTTTTGAATTATTGGGAAAAGCCATAAAGATAGATATGAAGGAAGTAGAGAATATGTTTGATGATGGCAATCAATCAATAAGGATGACATACTATCCGCCATGCCCGCAACCGGAGCTTGTCGATGGCATCAACCCTCACTCCGACGGCTCCGGCATAACCATCCTTAATCAGCTTAATGGAGTTGAAGGACTAGAGATTAAGAAAGATGGAGTTTGGATTCCTGTGACCTTTCTTCCAGATGCTTTTGTAGTTAATATTGGAGACATCATGGAGATTCTAAGCAATGGGGTCTACTCTAGCATAGAGCACAGGGTTTCAGTAAACAAAGAAAAGGAGAGAGTTTCTGTTGCTATGTTCTTCAACACCAAATTTGAAGCAGAAATTGGACCAGCAAAGAGTTTGATAAGTTCTGAAAATCCACCTTTGTTCAAAAGCATGTTGATGGAAGAATACTCCAAATACTTTTTTTCAAGAAATCTAAATGGGAAGACAAACTTGGAGAGGATGAGGATTTAA

Protein sequence

>Msa0616300

MASSQVANIFESTHSILGVMDEVINKPEMGIPKMFLRPDKEPSILSNETNPLQSIPVFDFQTLICGDNTELDKLFSACKDWGFFQVVNHGISSELLEKLKFEIPNFFKLPVEEKTKYKIRQGDFQGYGAVIRCEGQKLDWGDRFFMITNPIARRKPHLFPQLPSSLRDTLESYILELKKLGMTLFELLGKAIKIDMKEVENMFDDGNQSIRMTYYPPCPQPELVDGINPHSDGSGITILNQLNGVEGLEIKKDGVWIPVTFLPDAFVVNIGDIMEILSNGVYSSIEHRVSVNKEKERVSVAMFFNTKFEAEIGPAKSLISSENPPLFKSMLMEEYSKYFFSRNLNGKTNLERMRI*