AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0562950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0562950 MtrunA17_Chr8g0376781 97.938 97 2 0 24 120 16 112 1.86e-66 197
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0562950 AT4G22000.1 68.376 117 36 1 9 125 1 116 4.64e-54 166

Find 61 sgRNAs with CRISPR-Local

Find 806 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTCATCTCCTTCCTTTC+AGG 0.120263 4_1:+63243762 None:intergenic
CCTAAGGATATTATTAGAAT+TGG 0.288851 4_1:-63243215 Msa0562950:three_prime_UTR
ACTCTTGTAAGGGATTATTA+TGG 0.292133 4_1:+63243406 None:intergenic
CTTTCAACTAAACAAAGATT+TGG 0.294446 4_1:+63243556 None:intergenic
CGTAAAGAAGTTCTTCTTGC+TGG 0.300933 4_1:-63243804 Msa0562950:CDS
CACGAGCAAATAAATTTCTT+AGG 0.302753 4_1:+63243514 None:intergenic
GCTGTACAGAGAAGATAAAT+AGG 0.323754 4_1:-63244004 Msa0562950:intron
AATAATCCCTTACAAGAGTT+TGG 0.329795 4_1:-63243402 Msa0562950:three_prime_UTR
CTAATAAACAATAACTTTCA+TGG 0.344686 4_1:+63243347 None:intergenic
TTCTTCTTGCTGGAGAAGAT+TGG 0.378509 4_1:-63243794 Msa0562950:CDS
TTTGGCCTTGCTATTATCTC+GGG 0.405840 4_1:-63243384 Msa0562950:three_prime_UTR
AGCAAGGCCAAACTCTTGTA+AGG 0.413530 4_1:+63243395 None:intergenic
CAAATCTTTGTTTAGTTGAA+AGG 0.418102 4_1:-63243555 Msa0562950:three_prime_UTR
CCAATTCTAATAATATCCTT+AGG 0.427294 4_1:+63243215 None:intergenic
GTTTGGCCTTGCTATTATCT+CGG 0.430086 4_1:-63243385 Msa0562950:three_prime_UTR
AGCTGCTAGTTCAGCGGTAA+AGG 0.432878 4_1:-63243967 Msa0562950:CDS
GAAAAGGACATAAGGTTGAT+AGG 0.434665 4_1:-63243734 Msa0562950:CDS
AGAGAAGATAAATAGGGTTA+TGG 0.435186 4_1:-63243997 Msa0562950:CDS
TTGTTCTTGTGTTTAACCTA+AGG 0.438474 4_1:-63243231 Msa0562950:three_prime_UTR
GGCAAACACTGCTAGGTTGA+TGG 0.439655 4_1:-63243694 Msa0562950:CDS
TTAGTATTAGTGCTCGGCAT+AGG 0.464094 4_1:-63243836 Msa0562950:CDS
ACAAGAACTTGGCCTTGGTA+AGG 0.478107 4_1:+63243250 None:intergenic
CTGTACAGAGAAGATAAATA+GGG 0.499758 4_1:-63244003 Msa0562950:intron
ATGAGTTTGCCAAGGGAGTG+TGG 0.500959 4_1:-63243890 Msa0562950:CDS
TTGTAAGCAAGCAACATATC+CGG 0.503383 4_1:+63243663 None:intergenic
TAGTATTAGTGCTCGGCATA+GGG 0.503438 4_1:-63243835 Msa0562950:CDS
TGAGTTTGCCAAGGGAGTGT+GGG 0.513187 4_1:-63243889 Msa0562950:CDS
GAGATGAAGACGAGGCGAAA+AGG 0.513253 4_1:-63243750 Msa0562950:CDS
TTTGCTAACTTCTCGCGCCA+TGG 0.520110 4_1:+63243921 None:intergenic
AAGATAAATAGGGTTATGGC+AGG 0.525263 4_1:-63243993 Msa0562950:CDS
CAAGAACTTGGCCTTGGTAA+GGG 0.529629 4_1:+63243251 None:intergenic
TGCCGAGCACTAATACTAAG+AGG 0.532897 4_1:+63243840 None:intergenic
AAGATTTGGAGTACAGAGAA+AGG 0.535201 4_1:+63243570 None:intergenic
GGTATTGGGAGCTAGGGGCA+TGG 0.536258 4_1:-63243866 Msa0562950:CDS
GGAAATTGTAATTGCCTGCT+AGG 0.536830 4_1:-63243290 Msa0562950:three_prime_UTR
GAGTTTGCCAAGGGAGTGTG+GGG 0.545739 4_1:-63243888 Msa0562950:CDS
GACGAGGCGAAAAGGACATA+AGG 0.547643 4_1:-63243742 Msa0562950:CDS
TTTAGCACAGAGTACCTAGC+AGG 0.550189 4_1:+63243276 None:intergenic
AGAAGAGGGCAAACACTGCT+AGG 0.550721 4_1:-63243701 Msa0562950:CDS
CTGCTTTGATGAATGCATGT+TGG 0.553986 4_1:-63243311 Msa0562950:three_prime_UTR
AAAGTGGGCGAAGAAGATGA+AGG 0.570139 4_1:-63243634 Msa0562950:CDS
CAAGAACAAGAACTTGGCCT+TGG 0.570493 4_1:+63243245 None:intergenic
AAGATGAAGGAAGAAGAGAA+AGG 0.572789 4_1:-63243621 Msa0562950:CDS
CTACAGAGTATCAATATCCA+TGG 0.573029 4_1:-63243938 Msa0562950:CDS
CGAGAAGTTAGCAAAATACA+AGG 0.575656 4_1:-63243913 Msa0562950:CDS
TAGGATAGCTGCGGAGAAGA+GGG 0.580076 4_1:-63243715 Msa0562950:CDS
AGCCTCTTAGTATTAGTGCT+CGG 0.583490 4_1:-63243842 Msa0562950:CDS
TAGGTTGATGGATAAGATGC+CGG 0.589131 4_1:-63243682 Msa0562950:CDS
ATAGGATAGCTGCGGAGAAG+AGG 0.590998 4_1:-63243716 Msa0562950:CDS
TAAACACAAGAACAAGAACT+TGG 0.593255 4_1:+63243239 None:intergenic
ATACAAGGATGAGTTTGCCA+AGG 0.595001 4_1:-63243898 Msa0562950:CDS
TTGGCCTTGCTATTATCTCG+GGG 0.601249 4_1:-63243383 Msa0562950:three_prime_UTR
TACAGAGAAAGGCATACCAA+AGG 0.612958 4_1:+63243581 None:intergenic
GCAAGGCCAAACTCTTGTAA+GGG 0.627503 4_1:+63243396 None:intergenic
TACAAGGATGAGTTTGCCAA+GGG 0.634320 4_1:-63243897 Msa0562950:CDS
TAAGGTTGATAGGATAGCTG+CGG 0.683219 4_1:-63243724 Msa0562950:CDS
AGGAAAAGCTGCTAGTTCAG+CGG 0.684482 4_1:-63243973 Msa0562950:CDS
TGGCCTTGCTATTATCTCGG+GGG 0.690738 4_1:-63243382 Msa0562950:three_prime_UTR
AAAGGAAGGAGATGAAGACG+AGG 0.696241 4_1:-63243758 Msa0562950:CDS
TGTGCTAAACTCCCTTACCA+AGG 0.713053 4_1:-63243262 Msa0562950:three_prime_UTR
AGTTTGCCAAGGGAGTGTGG+GGG 0.755828 4_1:-63243887 Msa0562950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATATATATTTTATTATT+TGG - chr4_1:63245463-63245482 Msa0562950:intron 0.0%
!!! CTATTATTTTTTTTTTTTTG+TGG - chr4_1:63243790-63243809 Msa0562950:CDS 10.0%
!!! TTATTCAATATTTTTATTTG+AGG - chr4_1:63247549-63247568 Msa0562950:intron 10.0%
!!! AAAATATTTTATCAAAACTT+GGG + chr4_1:63251804-63251823 None:intergenic 10.0%
!! TATATCAAATTATAAACAAA+GGG + chr4_1:63252887-63252906 None:intergenic 10.0%
!! AGATTAAATTATCAAAATTA+AGG - chr4_1:63253530-63253549 Msa0562950:intron 10.0%
!! GATTAAATTATCAAAATTAA+GGG - chr4_1:63253531-63253550 Msa0562950:intron 10.0%
!! TCTAAGTTTAAATAATATTT+AGG + chr4_1:63254240-63254259 None:intergenic 10.0%
!! ATATTATTTAAACTTAGATT+AGG - chr4_1:63254242-63254261 Msa0562950:intron 10.0%
!! CAATAATTAACAATATTATT+AGG + chr4_1:63255260-63255279 None:intergenic 10.0%
!! ATATAAAATATTCAGTGTTA+CGG - chr4_1:63243220-63243239 Msa0562950:three_prime_UTR 15.0%
!! TATATTCATTGTATTTAAGT+GGG + chr4_1:63243710-63243729 None:intergenic 15.0%
!! ATATATTCATTGTATTTAAG+TGG + chr4_1:63243711-63243730 None:intergenic 15.0%
!! ATATATATATATATGACTAG+TGG - chr4_1:63244191-63244210 Msa0562950:intron 15.0%
!! ATGAACAAATACATTATTTA+AGG - chr4_1:63245215-63245234 Msa0562950:intron 15.0%
!!! ATGATGTAACTTTTTAATTA+TGG - chr4_1:63247073-63247092 Msa0562950:intron 15.0%
!! AGGTATTAAAAATTGTAAAT+TGG + chr4_1:63247129-63247148 None:intergenic 15.0%
!! GTAATAATACCATATTAAAT+TGG - chr4_1:63247691-63247710 Msa0562950:intron 15.0%
!! TTTCTTTATCGTAAAATTAT+AGG + chr4_1:63248489-63248508 None:intergenic 15.0%
!! TTTACGATAAAGAAAATAAA+TGG - chr4_1:63248494-63248513 Msa0562950:intron 15.0%
!! AAGTTAGATAATTATTTGTA+TGG - chr4_1:63249943-63249962 Msa0562950:intron 15.0%
!!! AAATATTTTATCAAAACTTG+GGG + chr4_1:63251803-63251822 None:intergenic 15.0%
!!! CAAAATATTTTATCAAAACT+TGG + chr4_1:63251805-63251824 None:intergenic 15.0%
!!! CAAGTTTTGATAAAATATTT+TGG - chr4_1:63251803-63251822 Msa0562950:intron 15.0%
!!! ATATTTTTATTTGAGAGAAA+TGG - chr4_1:63252261-63252280 Msa0562950:intron 15.0%
!! GTAATAATACCATATTAAAT+TGG - chr4_1:63247691-63247710 Msa0562950:intron 15.0%
!! GTATATCAAATTATAAACAA+AGG + chr4_1:63252888-63252907 None:intergenic 15.0%
!! TTTGTCATATTATCTAATAT+AGG - chr4_1:63253025-63253044 Msa0562950:intron 15.0%
!! TTGTCATATTATCTAATATA+GGG - chr4_1:63253026-63253045 Msa0562950:intron 15.0%
!! ATTTGTAGCAAATAAATAAT+TGG - chr4_1:63254161-63254180 Msa0562950:intron 15.0%
!!! GTTTAAATAATATTTAGGTT+AGG + chr4_1:63254235-63254254 None:intergenic 15.0%
!!! ATATTATTATTTTGTGAGTA+GGG + chr4_1:63254582-63254601 None:intergenic 15.0%
!!! AATATTATTATTTTGTGAGT+AGG + chr4_1:63254583-63254602 None:intergenic 15.0%
!! TGAAGACAAAAAAAAAAAAA+AGG - chr4_1:63254869-63254888 Msa0562950:intron 15.0%
!! GAAATAAATATAGTAAAAAG+AGG + chr4_1:63255135-63255154 None:intergenic 15.0%
!! TATAAAATATTCAGTGTTAC+GGG - chr4_1:63243221-63243240 Msa0562950:three_prime_UTR 20.0%
!!! TCAGAAGAATTTAAAACTAT+TGG - chr4_1:63243328-63243347 Msa0562950:three_prime_UTR 20.0%
!! CAATCAATATCTTCAATATT+TGG - chr4_1:63243571-63243590 Msa0562950:three_prime_UTR 20.0%
!!! TTATTTATATTTTGAACCAG+CGG + chr4_1:63243939-63243958 None:intergenic 20.0%
!!! TTTGTTTTTTTTTGCAAATG+GGG + chr4_1:63244439-63244458 None:intergenic 20.0%
!!! CTTTGTTTTTTTTTGCAAAT+GGG + chr4_1:63244440-63244459 None:intergenic 20.0%
!!! ACTTTGTTTTTTTTTGCAAA+TGG + chr4_1:63244441-63244460 None:intergenic 20.0%
!!! ACTTTGTTTTTTTTGCAAAT+GGG + chr4_1:63244574-63244593 None:intergenic 20.0%
!!! TACTTTGTTTTTTTTGCAAA+TGG + chr4_1:63244575-63244594 None:intergenic 20.0%
!!! TGACATTTTCTTAATACATA+TGG + chr4_1:63244934-63244953 None:intergenic 20.0%
!! AATTTAGATAACACAATTGT+TGG - chr4_1:63245253-63245272 Msa0562950:intron 20.0%
!! ATTAGTTGTGTTTATATAGT+GGG - chr4_1:63245390-63245409 Msa0562950:intron 20.0%
!!! AAATATTTTAGCAAAACTTG+AGG + chr4_1:63245542-63245561 None:intergenic 20.0%
!!! CAAGTTTTGCTAAAATATTT+TGG - chr4_1:63245542-63245561 Msa0562950:intron 20.0%
!! ATTACACAGAAAATTGTTTA+AGG - chr4_1:63246189-63246208 Msa0562950:intron 20.0%
!! TTAAAAAGTTACATCATCAT+TGG + chr4_1:63247070-63247089 None:intergenic 20.0%
!!! TATTTTTATTTGAGGAGAAA+TGG - chr4_1:63247557-63247576 Msa0562950:intron 20.0%
!! GTATTATTACCATTCTATTA+TGG + chr4_1:63247681-63247700 None:intergenic 20.0%
!! ATACTGAAACCAATTTAATA+TGG + chr4_1:63247703-63247722 None:intergenic 20.0%
!! ATTTATCCTTCTTGTATTTA+GGG + chr4_1:63248055-63248074 None:intergenic 20.0%
!! TGTTAATTGAAATAAGCATA+TGG - chr4_1:63248251-63248270 Msa0562950:intron 20.0%
!!! ATGGTTTTTATTTTTTGATG+CGG - chr4_1:63248270-63248289 Msa0562950:intron 20.0%
!!! AATTTTAAACTAGAGTAACT+TGG - chr4_1:63248731-63248750 Msa0562950:intron 20.0%
!! ATTATCTAATCATATAACGT+TGG + chr4_1:63248765-63248784 None:intergenic 20.0%
!!! TTCTGATTTATATGAACTTT+TGG + chr4_1:63248816-63248835 None:intergenic 20.0%
!! TAAAGTGATCATAGAATTAA+AGG - chr4_1:63249219-63249238 Msa0562950:intron 20.0%
!!! CTAGTTCTTAATTTTTAGAA+GGG + chr4_1:63249348-63249367 None:intergenic 20.0%
!!! ACTAGTTCTTAATTTTTAGA+AGG + chr4_1:63249349-63249368 None:intergenic 20.0%
!!! TTCTAAAAATTAAGAACTAG+TGG - chr4_1:63249348-63249367 Msa0562950:intron 20.0%
!! TCTAAAAATTAAGAACTAGT+GGG - chr4_1:63249349-63249368 Msa0562950:intron 20.0%
!!! AACCATTTTTTAAATTCAAG+TGG - chr4_1:63251504-63251523 Msa0562950:intron 20.0%
!!! ACCATTTTTTAAATTCAAGT+GGG - chr4_1:63251505-63251524 Msa0562950:intron 20.0%
!! ATTAGTAGTGTTTATATAGT+GGG - chr4_1:63251651-63251670 Msa0562950:intron 20.0%
!! GTATTATTACCATTCTATTA+TGG + chr4_1:63247681-63247700 None:intergenic 20.0%
!! ATACTGAAACCAATTTAATA+TGG + chr4_1:63247703-63247722 None:intergenic 20.0%
!!! AAAATAGTTGTTGTTGTTTT+TGG + chr4_1:63252678-63252697 None:intergenic 20.0%
!!! AAACAACAACAACTATTTTA+TGG - chr4_1:63252679-63252698 Msa0562950:intron 20.0%
!!! AACAACAACAACTATTTTAT+GGG - chr4_1:63252680-63252699 Msa0562950:intron 20.0%
!! TATTGTCAAAAAAAGACTAA+AGG - chr4_1:63252927-63252946 Msa0562950:intron 20.0%
!! ATTGTCAAAAAAAGACTAAA+GGG - chr4_1:63252928-63252947 Msa0562950:intron 20.0%
!! CTTTAATCCTTTACAATATT+TGG - chr4_1:63252957-63252976 Msa0562950:intron 20.0%
!! TCATAAACCAAATATTGTAA+AGG + chr4_1:63252967-63252986 None:intergenic 20.0%
!!! TTGATAATTTAATCTCTGAT+TGG + chr4_1:63253525-63253544 None:intergenic 20.0%
!! TGATGTTTATATGAGAAAAA+TGG - chr4_1:63253802-63253821 Msa0562950:intron 20.0%
!! CTTTAGTATTAAATTCACTT+TGG + chr4_1:63253834-63253853 None:intergenic 20.0%
!! CACATAAGTAAATATTGAAT+GGG + chr4_1:63253974-63253993 None:intergenic 20.0%
!!! TTACTAATTTTTACCACAAT+GGG + chr4_1:63254026-63254045 None:intergenic 20.0%
!! AAAGTGAATTATTGAGTATT+AGG + chr4_1:63254133-63254152 None:intergenic 20.0%
!! AAATAAATAATTGGACAAAC+AGG - chr4_1:63254170-63254189 Msa0562950:intron 20.0%
!! GTTATGATTATCATATATAC+TGG - chr4_1:63255363-63255382 Msa0562950:intron 20.0%
!! TACAATAAAACCAAAAAAGT+AGG + chr4_1:63255911-63255930 None:intergenic 20.0%
!!! ACTTTTTTGGTTTTATTGTA+AGG - chr4_1:63255911-63255930 Msa0562950:intron 20.0%
!!! TTTTATTGTAAGGAGTTTTT+AGG - chr4_1:63255921-63255940 Msa0562950:intron 20.0%
!! CTAATAAACAATAACTTTCA+TGG + chr4_1:63256045-63256064 None:intergenic 20.0%
! ATAAAATATTCAGTGTTACG+GGG - chr4_1:63243222-63243241 Msa0562950:three_prime_UTR 25.0%
!!! ATTTTTTTTTTTTTGTGGCC+AGG - chr4_1:63243795-63243814 Msa0562950:CDS 25.0%
! ACAAATGCATAATATATGCA+AGG + chr4_1:63243835-63243854 None:intergenic 25.0%
!! TATCTATACAATCTTTTTCC+CGG - chr4_1:63243989-63244008 Msa0562950:CDS 25.0%
!!! TCGTTTTGATAAAGACATAT+TGG - chr4_1:63244104-63244123 Msa0562950:intron 25.0%
!!! CTTTGTTTTTTTTGCAAATG+GGG + chr4_1:63244573-63244592 None:intergenic 25.0%
!! TTTTTGTGAAAAACAGTACA+TGG - chr4_1:63244644-63244663 Msa0562950:intron 25.0%
! CTTATCATATAAGCATAAGA+AGG + chr4_1:63244735-63244754 None:intergenic 25.0%
! CAAACCTTGATTATGATATT+CGG - chr4_1:63244834-63244853 Msa0562950:intron 25.0%
! AAAATGTCATATACTCTGAT+TGG - chr4_1:63244945-63244964 Msa0562950:intron 25.0%
!! CTACATATATCTTTTACAGT+AGG - chr4_1:63245140-63245159 Msa0562950:intron 25.0%
! TAAACACAAATTCCCATATT+GGG - chr4_1:63245305-63245324 Msa0562950:intron 25.0%
! TGTGTGAATTGAAAAAAAAG+TGG - chr4_1:63245340-63245359 Msa0562950:intron 25.0%
! CATTAGTTGTGTTTATATAG+TGG - chr4_1:63245389-63245408 Msa0562950:intron 25.0%
! TTAGTTGTGTTTATATAGTG+GGG - chr4_1:63245391-63245410 Msa0562950:intron 25.0%
!!! GCTTGATCTGAAATATATTT+TGG - chr4_1:63245588-63245607 Msa0562950:intron 25.0%
! ACTAATAAGTGAGAAACTTT+GGG + chr4_1:63245731-63245750 None:intergenic 25.0%
! AACTAATAAGTGAGAAACTT+TGG + chr4_1:63245732-63245751 None:intergenic 25.0%
!!! CTGTGTAATTTTGTTTAGTT+AGG + chr4_1:63246178-63246197 None:intergenic 25.0%
!! ATTTCCAATTAGTTCTTCAT+AGG + chr4_1:63246520-63246539 None:intergenic 25.0%
!! AAACAACAAAATTTGAAGCT+TGG + chr4_1:63247019-63247038 None:intergenic 25.0%
! TAATATTTGTTCAAGTGTAC+AGG + chr4_1:63247100-63247119 None:intergenic 25.0%
!!! AAAGAGTTTTGATGATAACA+AGG + chr4_1:63247149-63247168 None:intergenic 25.0%
! GTTATCATCAAAACTCTTTA+AGG - chr4_1:63247150-63247169 Msa0562950:intron 25.0%
! GACATTGTTTATTCCAAATA+GGG + chr4_1:63247491-63247510 None:intergenic 25.0%
!! ATAGTACCATATTGATAGTT+TGG - chr4_1:63247604-63247623 Msa0562950:intron 25.0%
!!! CGTCTTAAAATTGTTGTTTT+TGG + chr4_1:63247982-63248001 None:intergenic 25.0%
! GATTTATCCTTCTTGTATTT+AGG + chr4_1:63248056-63248075 None:intergenic 25.0%
! GTAATTATTATAAATGTCCG+TGG - chr4_1:63248175-63248194 Msa0562950:intron 25.0%
! TCACAAGAAAATTATGGAAT+TGG + chr4_1:63248216-63248235 None:intergenic 25.0%
! AAAGAAAATAAATGGAGTTG+TGG - chr4_1:63248502-63248521 Msa0562950:intron 25.0%
!! TCTGAAATTCAGATTCTTTA+TGG + chr4_1:63248543-63248562 None:intergenic 25.0%
! AGTTCAAAAATAAGACAAGT+TGG + chr4_1:63249074-63249093 None:intergenic 25.0%
!!! ACTTGTCTTATTTTTGAACT+TGG - chr4_1:63249074-63249093 Msa0562950:intron 25.0%
!!! CTTGTCTTATTTTTGAACTT+GGG - chr4_1:63249075-63249094 Msa0562950:intron 25.0%
! CTATAAACAACGAAACATAT+AGG - chr4_1:63249180-63249199 Msa0562950:intron 25.0%
! AATATTTACCCCTTTAACTA+AGG - chr4_1:63249259-63249278 Msa0562950:intron 25.0%
! CTAAAAATTAAGAACTAGTG+GGG - chr4_1:63249350-63249369 Msa0562950:intron 25.0%
! TAAAAATTAAGAACTAGTGG+GGG - chr4_1:63249351-63249370 Msa0562950:intron 25.0%
! TATGAACTTGGTTTATACAT+TGG - chr4_1:63249477-63249496 Msa0562950:intron 25.0%
! ATGAGGATATAACTTCTTTA+AGG + chr4_1:63249519-63249538 None:intergenic 25.0%
! TAAAGAAGTTATATCCTCAT+TGG - chr4_1:63249519-63249538 Msa0562950:intron 25.0%
!!! TGTATTTGGATTTTGGAAAA+AGG - chr4_1:63249647-63249666 Msa0562950:intron 25.0%
! GACAAAATTGAAGTAATTCT+TGG - chr4_1:63250169-63250188 Msa0562950:intron 25.0%
! ACTAGGAGTAACATATTAAA+TGG - chr4_1:63250526-63250545 Msa0562950:intron 25.0%
! AATGAGATCTATACTCTATT+TGG - chr4_1:63251157-63251176 Msa0562950:intron 25.0%
! TTAGAATACACCTTATGAAA+AGG - chr4_1:63251329-63251348 Msa0562950:intron 25.0%
!!! TAAGATTTGCTAGTAAACAA+AGG + chr4_1:63251457-63251476 None:intergenic 25.0%
! TTGTTTACTAGCAAATCTTA+TGG - chr4_1:63251457-63251476 Msa0562950:intron 25.0%
! TCCCACTTGAATTTAAAAAA+TGG + chr4_1:63251509-63251528 None:intergenic 25.0%
! TTGTGTGAATTGAAAAAATG+TGG - chr4_1:63251601-63251620 Msa0562950:intron 25.0%
! CATTAGTAGTGTTTATATAG+TGG - chr4_1:63251650-63251669 Msa0562950:intron 25.0%
! TTAGTAGTGTTTATATAGTG+GGG - chr4_1:63251652-63251671 Msa0562950:intron 25.0%
!!! GCTTGATCTGAAATATATTT+TGG - chr4_1:63245588-63245607 Msa0562950:intron 25.0%
!! AAAGTACTCTTTATTCTGAA+GGG + chr4_1:63252161-63252180 None:intergenic 25.0%
!!! AAAAGTACTCTTTATTCTGA+AGG + chr4_1:63252162-63252181 None:intergenic 25.0%
! TTAAGATCATAGTTCCTATT+TGG - chr4_1:63252180-63252199 Msa0562950:intron 25.0%
!!! TTTTTATTTGAGAGAAATGG+TGG - chr4_1:63252264-63252283 Msa0562950:intron 25.0%
!! ATAGTACCATATTGATAGTT+TGG - chr4_1:63247604-63247623 Msa0562950:intron 25.0%
! CTTCAGTAGATAATAGAATT+TGG - chr4_1:63252626-63252645 Msa0562950:intron 25.0%
!! GATTTTCAAACTGTTGTATT+TGG + chr4_1:63252656-63252675 None:intergenic 25.0%
! AATTTGATATACGTGAGTAT+AGG - chr4_1:63252896-63252915 Msa0562950:intron 25.0%
! ATTTGATATACGTGAGTATA+GGG - chr4_1:63252897-63252916 Msa0562950:intron 25.0%
! TGGTTTATGACTTTATGTTT+AGG - chr4_1:63252977-63252996 Msa0562950:intron 25.0%
! TAAAAGAGTGGTTTATAAGA+TGG + chr4_1:63253302-63253321 None:intergenic 25.0%
!! TTTTAAATTAGACTCGACTT+AGG - chr4_1:63253317-63253336 Msa0562950:intron 25.0%
! ATAAAGCAAATGGAGTAATA+GGG + chr4_1:63253424-63253443 None:intergenic 25.0%
! TATAAAGCAAATGGAGTAAT+AGG + chr4_1:63253425-63253444 None:intergenic 25.0%
! TATTACTCCATTTGCTTTAT+AGG - chr4_1:63253424-63253443 Msa0562950:intron 25.0%
! AGTTAAAAAAGAACAGTAAC+TGG - chr4_1:63253581-63253600 Msa0562950:intron 25.0%
! GCACATAAGTAAATATTGAA+TGG + chr4_1:63253975-63253994 None:intergenic 25.0%
!! CTTACTAATTTTTACCACAA+TGG + chr4_1:63254027-63254046 None:intergenic 25.0%
! CATTGTGGTAAAAATTAGTA+AGG - chr4_1:63254025-63254044 Msa0562950:intron 25.0%
! TTTCCATACCAATTAAGTTA+AGG + chr4_1:63254064-63254083 None:intergenic 25.0%
! AATGCTAATAAGTCAGAATT+CGG + chr4_1:63254835-63254854 None:intergenic 25.0%
! AGATAAAGAAAACAAACAGA+CGG - chr4_1:63254899-63254918 Msa0562950:intron 25.0%
! AAATTGTGTGCATTTATGTA+AGG - chr4_1:63255280-63255299 Msa0562950:intron 25.0%
! ATCATAACAAAAAGTTAGTC+AGG + chr4_1:63255351-63255370 None:intergenic 25.0%
! CTTTCAACTAAACAAAGATT+TGG + chr4_1:63255836-63255855 None:intergenic 25.0%
!! CAAATCTTTGTTTAGTTGAA+AGG - chr4_1:63255834-63255853 Msa0562950:intron 25.0%
! CCAATTCTAATAATATCCTT+AGG + chr4_1:63256177-63256196 None:intergenic 25.0%
! CCTAAGGATATTATTAGAAT+TGG - chr4_1:63256174-63256193 Msa0562950:intron 25.0%
ACTTAAAACTGTTTCAGCTT+TGG - chr4_1:63243192-63243211 Msa0562950:three_prime_UTR 30.0%
TAAAATATTCAGTGTTACGG+GGG - chr4_1:63243223-63243242 Msa0562950:three_prime_UTR 30.0%
AAATATATTCCTCAAGAGGT+GGG - chr4_1:63243253-63243272 Msa0562950:three_prime_UTR 30.0%
!! TCATTGATTATTGCCTTTTG+AGG - chr4_1:63243293-63243312 Msa0562950:three_prime_UTR 30.0%
!! CATTGATTATTGCCTTTTGA+GGG - chr4_1:63243294-63243313 Msa0562950:three_prime_UTR 30.0%
AGAATATCAATACCCTCAAA+AGG + chr4_1:63243309-63243328 None:intergenic 30.0%
! CTTTCAAGTGTGTATCTTAA+GGG + chr4_1:63243359-63243378 None:intergenic 30.0%
TGTTTCAAAATTGAGTGTGA+AGG - chr4_1:63243389-63243408 Msa0562950:three_prime_UTR 30.0%
ATGCCATGGAGAATAAAATA+AGG - chr4_1:63243644-63243663 Msa0562950:CDS 30.0%
!!! AGACCTTATTTTATTCTCCA+TGG + chr4_1:63243650-63243669 None:intergenic 30.0%
AATAAGGTCTATGCGTATAA+AGG - chr4_1:63243660-63243679 Msa0562950:CDS 30.0%
TTGTATGACATTAACGAATG+TGG - chr4_1:63244014-63244033 Msa0562950:intron 30.0%
TATATATGACTAGTGGTGAA+CGG - chr4_1:63244198-63244217 Msa0562950:intron 30.0%
!!! TCTCATTCCTATTTTGAAAC+CGG + chr4_1:63244229-63244248 None:intergenic 30.0%
AAACATGAAGATCATGAGTT+GGG + chr4_1:63244257-63244276 None:intergenic 30.0%
TAGACCGAATATCATAATCA+AGG + chr4_1:63244841-63244860 None:intergenic 30.0%
CATGTTCTATCTAATTGGTA+AGG + chr4_1:63244877-63244896 None:intergenic 30.0%
TACCAATTAGATAGAACATG+TGG - chr4_1:63244877-63244896 Msa0562950:intron 30.0%
!! AAGATGAATTTCTAGTCACT+AGG + chr4_1:63245038-63245057 None:intergenic 30.0%
AGATATTGCACTACATTTGT+AGG + chr4_1:63245103-63245122 None:intergenic 30.0%
CTAAACACAAATTCCCATAT+TGG - chr4_1:63245304-63245323 Msa0562950:intron 30.0%
TAGTTGTGTTTATATAGTGG+GGG - chr4_1:63245392-63245411 Msa0562950:intron 30.0%
TAATCAGAATCTAAATGCAG+CGG - chr4_1:63245912-63245931 Msa0562950:intron 30.0%
AACACTTGATATACAATCAG+AGG - chr4_1:63246215-63246234 Msa0562950:intron 30.0%
TCTTTCACACCTCTATATAA+AGG + chr4_1:63246411-63246430 None:intergenic 30.0%
TTGTCCTATGAAGAACTAAT+TGG - chr4_1:63246513-63246532 Msa0562950:intron 30.0%
AAAACACAACAAAGGATTAG+TGG + chr4_1:63246731-63246750 None:intergenic 30.0%
AATGAGCAAATAAAGAGCAA+AGG + chr4_1:63247042-63247061 None:intergenic 30.0%
! AAAGAGTTTCATTGAGTTGT+CGG - chr4_1:63247215-63247234 Msa0562950:intron 30.0%
CGTCAACATAAGTCAAAAAA+GGG + chr4_1:63247259-63247278 None:intergenic 30.0%
TCGTCAACATAAGTCAAAAA+AGG + chr4_1:63247260-63247279 None:intergenic 30.0%
AAGGGACATATATTATCGAA+GGG + chr4_1:63247438-63247457 None:intergenic 30.0%
TTCGATAATATATGTCCCTT+CGG - chr4_1:63247438-63247457 Msa0562950:intron 30.0%
! AAAGTACTCTTTATTCCGAA+GGG + chr4_1:63247456-63247475 None:intergenic 30.0%
!! AAAAGTACTCTTTATTCCGA+AGG + chr4_1:63247457-63247476 None:intergenic 30.0%
TTAAGATCATAGTCCCTATT+TGG - chr4_1:63247475-63247494 Msa0562950:intron 30.0%
GGACATTGTTTATTCCAAAT+AGG + chr4_1:63247492-63247511 None:intergenic 30.0%
AAGATCATTCTTAATTCCGA+CGG + chr4_1:63247514-63247533 None:intergenic 30.0%
!! TTTTATTTGAGGAGAAATGG+TGG - chr4_1:63247560-63247579 Msa0562950:intron 30.0%
AGTTCTCCAAACTATCAATA+TGG + chr4_1:63247613-63247632 None:intergenic 30.0%
TGATAGTTTGGAGAACTTAA+AGG - chr4_1:63247616-63247635 Msa0562950:intron 30.0%
GAACTTAAAGGTTAGAATGA+TGG - chr4_1:63247628-63247647 Msa0562950:intron 30.0%
TTGGTTTCAGTATTAAAGAG+TGG - chr4_1:63247710-63247729 Msa0562950:intron 30.0%
! TTGCACAATTGCACAATTTT+GGG - chr4_1:63247850-63247869 Msa0562950:intron 30.0%
CTTCGGTAGATAATAGAATT+TGG - chr4_1:63247930-63247949 Msa0562950:intron 30.0%
GAAATCCAAATACAACAGTT+TGG - chr4_1:63247952-63247971 Msa0562950:intron 30.0%
GATTTCCAAACTGTTGTATT+TGG + chr4_1:63247960-63247979 None:intergenic 30.0%
ACCTCAATAAGTAACTTCTT+CGG + chr4_1:63248024-63248043 None:intergenic 30.0%
AATTGTCCCTAAATACAAGA+AGG - chr4_1:63248046-63248065 Msa0562950:intron 30.0%
ACGGTATCACAAGAAAATTA+TGG + chr4_1:63248222-63248241 None:intergenic 30.0%
TCAATTAACACAAGAAGCAA+CGG + chr4_1:63248241-63248260 None:intergenic 30.0%
!!! TTTATTTTTTGATGCGGTGA+TGG - chr4_1:63248276-63248295 Msa0562950:intron 30.0%
CAACTACTTCACCTAAAAAA+CGG - chr4_1:63248355-63248374 Msa0562950:intron 30.0%
AATGTTATTGCGCTTAACTT+GGG + chr4_1:63248418-63248437 None:intergenic 30.0%
AATCACACGACTAAAATAGA+AGG + chr4_1:63248670-63248689 None:intergenic 30.0%
! TTATTGATGACTGTGAATTC+TGG - chr4_1:63248932-63248951 Msa0562950:intron 30.0%
TCTGAACTATATTTGGATTC+TGG - chr4_1:63249102-63249121 Msa0562950:intron 30.0%
CTATGATCACTTTAGCATTT+AGG + chr4_1:63249213-63249232 None:intergenic 30.0%
CCATTATTCCTTAGTTAAAG+GGG + chr4_1:63249270-63249289 None:intergenic 30.0%
CCCATTATTCCTTAGTTAAA+GGG + chr4_1:63249271-63249290 None:intergenic 30.0%
CCCTTTAACTAAGGAATAAT+GGG - chr4_1:63249268-63249287 Msa0562950:intron 30.0%
CCTTTAACTAAGGAATAATG+GGG - chr4_1:63249269-63249288 Msa0562950:intron 30.0%
CTTTAACTAAGGAATAATGG+GGG - chr4_1:63249270-63249289 Msa0562950:intron 30.0%
! ATTGCTAAAGAGTATGAACT+TGG - chr4_1:63249465-63249484 Msa0562950:intron 30.0%
AAAATCCAAATACAACCGAT+TGG + chr4_1:63249641-63249660 None:intergenic 30.0%
! AATCGGTTGTATTTGGATTT+TGG - chr4_1:63249640-63249659 Msa0562950:intron 30.0%
AAAAAGGAACTAAAACCTGA+TGG - chr4_1:63249663-63249682 Msa0562950:intron 30.0%
AGACAACTTTCACATTCATT+TGG + chr4_1:63249840-63249859 None:intergenic 30.0%
! GTGAAAGTTGTCTCTTTTTA+TGG - chr4_1:63249847-63249866 Msa0562950:intron 30.0%
TAAAATAAACTCCTGAGGAA+TGG - chr4_1:63249968-63249987 Msa0562950:intron 30.0%
! ATCTCAAGTGTTATTACACT+TGG + chr4_1:63250316-63250335 None:intergenic 30.0%
TTAGAGTCATAGTCTTCTTA+AGG + chr4_1:63250497-63250516 None:intergenic 30.0%
ATCTCAGATTCATTTCATAG+TGG + chr4_1:63250656-63250675 None:intergenic 30.0%
! GAAACGATTTTATCCACTAA+GGG + chr4_1:63250738-63250757 None:intergenic 30.0%
!! TCGTTTCCAAAAGTGTTAAA+TGG - chr4_1:63250751-63250770 Msa0562950:intron 30.0%
! TCACAACCATTTAACACTTT+TGG + chr4_1:63250760-63250779 None:intergenic 30.0%
ATTGAGAATCGTTACTACAA+TGG - chr4_1:63250802-63250821 Msa0562950:intron 30.0%
TTAGTAATTCCTTTCGTCAA+AGG + chr4_1:63250936-63250955 None:intergenic 30.0%
TTATGAAAAGGTTTGTGTGT+GGG - chr4_1:63251341-63251360 Msa0562950:intron 30.0%
TAAACACAAATTCCCATGTT+GGG - chr4_1:63251567-63251586 Msa0562950:intron 30.0%
TAGTAGTGTTTATATAGTGG+GGG - chr4_1:63251653-63251672 Msa0562950:intron 30.0%
! AAAGAGTTTCATTGAGTTGT+CGG - chr4_1:63247215-63247234 Msa0562950:intron 30.0%
AAGGTACATTAAACCGAAAA+GGG + chr4_1:63252090-63252109 None:intergenic 30.0%
! TTTTCGGTTTAATGTACCTT+CGG - chr4_1:63252090-63252109 Msa0562950:intron 30.0%
AAGGGACATATATTATCGAA+AGG + chr4_1:63247438-63247457 None:intergenic 30.0%
GGACATTGTTTATTCCAAAT+AGG + chr4_1:63247492-63247511 None:intergenic 30.0%
AAGATCATTCTTAATTCCGA+CGG + chr4_1:63247514-63247533 None:intergenic 30.0%
AGTTCTCCAAACTATCAATA+TGG + chr4_1:63247613-63247632 None:intergenic 30.0%
TGATAGTTTGGAGAACTTAA+AGG - chr4_1:63247616-63247635 Msa0562950:intron 30.0%
TTGGTTTCAGTATTAAAGAG+TGG - chr4_1:63247710-63247729 Msa0562950:intron 30.0%
TATCTACTGAAGTTGTTACT+AGG + chr4_1:63252618-63252637 None:intergenic 30.0%
! AACAACAACTATTTTATGGG+TGG - chr4_1:63252683-63252702 Msa0562950:intron 30.0%
! TTTAGGACTAACAAAAAGTG+TGG - chr4_1:63252994-63253013 Msa0562950:intron 30.0%
! TTAGGACTAACAAAAAGTGT+GGG - chr4_1:63252995-63253014 Msa0562950:intron 30.0%
ACTACTTGTATACCGAATTA+TGG - chr4_1:63253090-63253109 Msa0562950:intron 30.0%
ACTTCGCCAAATACTTATAT+AGG - chr4_1:63253117-63253136 Msa0562950:intron 30.0%
CATCCACCTATATAAGTATT+TGG + chr4_1:63253126-63253145 None:intergenic 30.0%
TGTGAACTTTGACTCTTAAA+AGG - chr4_1:63253202-63253221 Msa0562950:intron 30.0%
TCGAGTCTAATTTAAAAGAG+TGG + chr4_1:63253314-63253333 None:intergenic 30.0%
TCATATAAACATCACTACCA+CGG + chr4_1:63253796-63253815 None:intergenic 30.0%
TGACCTTAACTTAATTGGTA+TGG - chr4_1:63254058-63254077 Msa0562950:intron 30.0%
AAATAATTGGACAAACAGGA+AGG - chr4_1:63254174-63254193 Msa0562950:intron 30.0%
CATATATCCATGTCCAAAAT+CGG + chr4_1:63254211-63254230 None:intergenic 30.0%
GTAGAGGAGAAATACTTATT+TGG - chr4_1:63254369-63254388 Msa0562950:intron 30.0%
GTGCTTAAACACTATACATT+TGG - chr4_1:63254503-63254522 Msa0562950:intron 30.0%
! ATGATTTGAGTTCATTCACT+TGG + chr4_1:63254720-63254739 None:intergenic 30.0%
GATAAAGAAAACAAACAGAC+GGG - chr4_1:63254900-63254919 Msa0562950:intron 30.0%
! TGTTTCTGATACTACTACAT+GGG + chr4_1:63254997-63255016 None:intergenic 30.0%
!! TTGTTTCTGATACTACTACA+TGG + chr4_1:63254998-63255017 None:intergenic 30.0%
GTATCAGAAACAAGTTCAAT+CGG - chr4_1:63255005-63255024 Msa0562950:intron 30.0%
ATAGTAAAAAGAGGAAAACC+TGG + chr4_1:63255126-63255145 None:intergenic 30.0%
AAATTGTGTGCATGTATGTA+AGG - chr4_1:63255311-63255330 Msa0562950:intron 30.0%
CTGTACAGAGAAGATAAATA+GGG - chr4_1:63255386-63255405 Msa0562950:intron 30.0%
AGAGAAGATAAATAGGGTTA+TGG - chr4_1:63255392-63255411 Msa0562950:intron 30.0%
TTGCTTACAAGAAGAAAAAG+TGG - chr4_1:63255739-63255758 Msa0562950:intron 30.0%
TGCTTACAAGAAGAAAAAGT+GGG - chr4_1:63255740-63255759 Msa0562950:intron 30.0%
! AAATTCTGATTTTGCTCCTT+TGG - chr4_1:63255792-63255811 Msa0562950:intron 30.0%
CACGAGCAAATAAATTTCTT+AGG + chr4_1:63255878-63255897 None:intergenic 30.0%
!!! CAATGTTACACCTACTTTTT+TGG - chr4_1:63255898-63255917 Msa0562950:intron 30.0%
ACTCTTGTAAGGGATTATTA+TGG + chr4_1:63255986-63256005 None:intergenic 30.0%
AATAATCCCTTACAAGAGTT+TGG - chr4_1:63255987-63256006 Msa0562950:intron 30.0%
TAAACACAAGAACAAGAACT+TGG + chr4_1:63256153-63256172 None:intergenic 30.0%
TTGTTCTTGTGTTTAACCTA+AGG - chr4_1:63256158-63256177 Msa0562950:intron 30.0%
GGACAAATATATTCCTCAAG+AGG - chr4_1:63243249-63243268 Msa0562950:three_prime_UTR 35.0%
CAAATATATTCCTCAAGAGG+TGG - chr4_1:63243252-63243271 Msa0562950:three_prime_UTR 35.0%
! GCTTTCAAGTGTGTATCTTA+AGG + chr4_1:63243360-63243379 None:intergenic 35.0%
TCTAACTCACTAGCTATGTT+TGG + chr4_1:63243456-63243475 None:intergenic 35.0%
!! GTACTTTTTAGATCTAGCTG+TGG - chr4_1:63243619-63243638 Msa0562950:CDS 35.0%
TGCATAATATATGCAAGGTC+CGG + chr4_1:63243830-63243849 None:intergenic 35.0%
! CAATAAAAAGCTATTTCCGC+TGG - chr4_1:63243920-63243939 Msa0562950:CDS 35.0%
TCGTTAATGTCATACAACTC+CGG + chr4_1:63244011-63244030 None:intergenic 35.0%
CAAACATGAAGATCATGAGT+TGG + chr4_1:63244258-63244277 None:intergenic 35.0%
CATAAAATGTACTACCTCTG+CGG - chr4_1:63244408-63244427 Msa0562950:intron 35.0%
CATAAAATGTACTACCTCTG+CGG - chr4_1:63244408-63244427 Msa0562950:intron 35.0%
GTCCACATGTTCTATCTAAT+TGG + chr4_1:63244882-63244901 None:intergenic 35.0%
! TAGATAGAACATGTGGACTA+TGG - chr4_1:63244884-63244903 Msa0562950:intron 35.0%
ATGTCATATACTCTGATTGG+TGG - chr4_1:63244948-63244967 Msa0562950:intron 35.0%
GTGGAGTGTACGATATATTA+AGG - chr4_1:63244970-63244989 Msa0562950:intron 35.0%
ACACAAGTTCTACCCAATAT+GGG + chr4_1:63245320-63245339 None:intergenic 35.0%
AACACAAGTTCTACCCAATA+TGG + chr4_1:63245321-63245340 None:intergenic 35.0%
TATGTACCCCCATTAATTAG+AGG + chr4_1:63245422-63245441 None:intergenic 35.0%
AAGGTGAGAAAAACACAAGA+AGG - chr4_1:63245795-63245814 Msa0562950:intron 35.0%
AGGTGAGAAAAACACAAGAA+GGG - chr4_1:63245796-63245815 Msa0562950:intron 35.0%
! GATCAGTGTGTTCAGTTTTT+AGG + chr4_1:63245862-63245881 None:intergenic 35.0%
ACGACACAAAGCAATTATAC+TGG - chr4_1:63245958-63245977 Msa0562950:intron 35.0%
TACTCTTAGTGAAATCTCCT+TGG + chr4_1:63246026-63246045 None:intergenic 35.0%
TTGATTGTGTTCTTGAGCAA+AGG + chr4_1:63246120-63246139 None:intergenic 35.0%
CAAATCAGATACAGACTCAA+TGG - chr4_1:63246249-63246268 Msa0562950:intron 35.0%
ATGCAGAAAAATTTCAGCAG+AGG - chr4_1:63246321-63246340 Msa0562950:intron 35.0%
GTCTTCACTCCTTTATATAG+AGG - chr4_1:63246399-63246418 Msa0562950:intron 35.0%
CAAATCAGGCAATAGATCAA+AGG + chr4_1:63246489-63246508 None:intergenic 35.0%
CTTTGATCTATTGCCTGATT+TGG - chr4_1:63246487-63246506 Msa0562950:intron 35.0%
AAGAAAACAGCTCCAGAATA+CGG + chr4_1:63246580-63246599 None:intergenic 35.0%
!! GTCATTTCAAAGGTGTTTGA+AGG + chr4_1:63246696-63246715 None:intergenic 35.0%
! TTTTGCAACGGTCATTTCAA+AGG + chr4_1:63246706-63246725 None:intergenic 35.0%
!! GGATTAGTGGAATTTTGCAA+CGG + chr4_1:63246718-63246737 None:intergenic 35.0%
TGGATTCGAAAACACAACAA+AGG + chr4_1:63246739-63246758 None:intergenic 35.0%
ATATTCAGCTTCTGGTGAAA+TGG - chr4_1:63246816-63246835 Msa0562950:intron 35.0%
TGATACAGCTTCTGATGATA+TGG - chr4_1:63246876-63246895 Msa0562950:intron 35.0%
TTCAGAAGCTACTTAACTTC+AGG - chr4_1:63246952-63246971 Msa0562950:intron 35.0%
GACAACTCAATGAAACTCTT+TGG + chr4_1:63247216-63247235 None:intergenic 35.0%
! AAGAGTTTCATTGAGTTGTC+GGG - chr4_1:63247216-63247235 Msa0562950:intron 35.0%
TTGTTAAACAAGTCGAAGGA+GGG + chr4_1:63247299-63247318 None:intergenic 35.0%
AAAGGAGTAGAAAAAGGAGA+AGG + chr4_1:63247324-63247343 None:intergenic 35.0%
AGAACACTCTTAATTCCGAA+GGG + chr4_1:63247351-63247370 None:intergenic 35.0%
AAGAACACTCTTAATTCCGA+AGG + chr4_1:63247352-63247371 None:intergenic 35.0%
CATTAAACCAAAAGGGATTG+TGG + chr4_1:63247379-63247398 None:intergenic 35.0%
GAAGGGACATTAAACCAAAA+GGG + chr4_1:63247386-63247405 None:intergenic 35.0%
!!! CTTTTGGTTTAATGTCCCTT+CGG - chr4_1:63247385-63247404 Msa0562950:intron 35.0%
AGACCATTCTTAATTCCGAA+GGG + chr4_1:63247403-63247422 None:intergenic 35.0%
AAGACCATTCTTAATTCCGA+AGG + chr4_1:63247404-63247423 None:intergenic 35.0%
GAAGGGACATATATTATCGA+AGG + chr4_1:63247439-63247458 None:intergenic 35.0%
AGATCATTCTTAATTCCGAC+GGG + chr4_1:63247513-63247532 None:intergenic 35.0%
GTACTATGACCACTCAAATA+TGG + chr4_1:63247591-63247610 None:intergenic 35.0%
ATGGAAACACCATATTTGAG+TGG - chr4_1:63247647-63247666 Msa0562950:intron 35.0%
! TGGTCTTAGTACCATATTTG+AGG - chr4_1:63247730-63247749 Msa0562950:intron 35.0%
GGTCTTAGTACCATATTTGA+GGG - chr4_1:63247731-63247750 Msa0562950:intron 35.0%
GAGATTTACACCCTCAAATA+TGG + chr4_1:63247744-63247763 None:intergenic 35.0%
!!! TAGTTGGACTTGTTTTATCC+TGG - chr4_1:63247803-63247822 Msa0562950:intron 35.0%
CAAAATTGTGCAATTGTGCA+AGG + chr4_1:63247851-63247870 None:intergenic 35.0%
! CTTGCACAATTGCACAATTT+TGG - chr4_1:63247849-63247868 Msa0562950:intron 35.0%
ACTCAACCTAGTAACAACTT+CGG - chr4_1:63247913-63247932 Msa0562950:intron 35.0%
TATCTACCGAAGTTGTTACT+AGG + chr4_1:63247922-63247941 None:intergenic 35.0%
ACCGAAGAAGTTACTTATTG+AGG - chr4_1:63248020-63248039 Msa0562950:intron 35.0%
!!! TTTCCTTGGTACCGTTTTTT+AGG + chr4_1:63248369-63248388 None:intergenic 35.0%
ATGCTTCTAACGATAGTTCA+AGG - chr4_1:63248391-63248410 Msa0562950:intron 35.0%
! ATGTTATTGCGCTTAACTTG+GGG + chr4_1:63248417-63248436 None:intergenic 35.0%
CAATGTTATTGCGCTTAACT+TGG + chr4_1:63248419-63248438 None:intergenic 35.0%
GTTAAGCGCAATAACATTGT+TGG - chr4_1:63248420-63248439 Msa0562950:intron 35.0%
GGGATTGTCTGAACTATATT+TGG - chr4_1:63249095-63249114 Msa0562950:intron 35.0%
CCTATGAATGTGTGTTCATT+GGG - chr4_1:63249153-63249172 Msa0562950:intron 35.0%
CCCCTTTAACTAAGGAATAA+TGG - chr4_1:63249267-63249286 Msa0562950:intron 35.0%
CCCCATTATTCCTTAGTTAA+AGG + chr4_1:63249272-63249291 None:intergenic 35.0%
!! TTAGTTTTCTTACCTCCTTG+AGG + chr4_1:63249444-63249463 None:intergenic 35.0%
TCATAATTCAGCATCCAATG+AGG + chr4_1:63249536-63249555 None:intergenic 35.0%
GTCTAACAAAACATGACACT+TGG - chr4_1:63249591-63249610 Msa0562950:intron 35.0%
CTCATAGTTGCAAAACCAAT+CGG - chr4_1:63249623-63249642 Msa0562950:intron 35.0%
CAAAACCAATCGGTTGTATT+TGG - chr4_1:63249633-63249652 Msa0562950:intron 35.0%
! GTCTAAAACCTTTGACTACA+AGG + chr4_1:63249713-63249732 None:intergenic 35.0%
! ATGGATATGATTTTCGTGAC+TGG + chr4_1:63249772-63249791 None:intergenic 35.0%
! TAAAGGGACTAGTACTCTTA+TGG + chr4_1:63249791-63249810 None:intergenic 35.0%
GAGTACTATCGAGTTATGAA+CGG + chr4_1:63249818-63249837 None:intergenic 35.0%
GATTCATGGACAAGAAAACA+TGG - chr4_1:63249915-63249934 Msa0562950:intron 35.0%
! TGGTCTAAAATAAACTCCTG+AGG - chr4_1:63249963-63249982 Msa0562950:intron 35.0%
! AATTTTTCATGCCATTCCTC+AGG + chr4_1:63249982-63250001 None:intergenic 35.0%
ATAGAATATGCGAGCATCAT+TGG - chr4_1:63250348-63250367 Msa0562950:intron 35.0%
TACATTTAGTGGCTTACCTA+AGG + chr4_1:63250378-63250397 None:intergenic 35.0%
GTCGGATCTAATACATTTAG+TGG + chr4_1:63250389-63250408 None:intergenic 35.0%
TGTGCAAGTTTACTAGTAGA+CGG - chr4_1:63250431-63250450 Msa0562950:intron 35.0%
TCATGACTCTTTCTATAGCA+TGG + chr4_1:63250470-63250489 None:intergenic 35.0%
ATGCTATAGAAAGAGTCATG+AGG - chr4_1:63250469-63250488 Msa0562950:intron 35.0%
!! GACTCTAAGATTACTTCACT+AGG - chr4_1:63250509-63250528 Msa0562950:intron 35.0%
AGAACACTAGAGAAAACTAG+TGG - chr4_1:63250677-63250696 Msa0562950:intron 35.0%
! GGAAACGATTTTATCCACTA+AGG + chr4_1:63250739-63250758 None:intergenic 35.0%
ATGGCAAGAGACGATTATTA+AGG - chr4_1:63250821-63250840 Msa0562950:intron 35.0%
TTAGTCAATCCTTTGACGAA+AGG - chr4_1:63250924-63250943 Msa0562950:intron 35.0%
AAGTCCTAAACACATCCAAT+AGG - chr4_1:63250961-63250980 Msa0562950:intron 35.0%
CTAAACACATCCAATAGGAT+GGG - chr4_1:63250966-63250985 Msa0562950:intron 35.0%
TACCATCACTTATGACCTTT+GGG + chr4_1:63250999-63251018 None:intergenic 35.0%
TTACCATCACTTATGACCTT+TGG + chr4_1:63251000-63251019 None:intergenic 35.0%
ATCCCAAGAAATAGGTTCAA+TGG - chr4_1:63251040-63251059 Msa0562950:intron 35.0%
TCCCAAGAAATAGGTTCAAT+GGG - chr4_1:63251041-63251060 Msa0562950:intron 35.0%
! ACCCATTGAACCTATTTCTT+GGG + chr4_1:63251045-63251064 None:intergenic 35.0%
! TACCCATTGAACCTATTTCT+TGG + chr4_1:63251046-63251065 None:intergenic 35.0%
GATCTATACTCTATTTGGAG+TGG - chr4_1:63251162-63251181 Msa0562950:intron 35.0%
CTATACGAATGTGGAACTAA+GGG - chr4_1:63251221-63251240 Msa0562950:intron 35.0%
! CACACACAAACCTTTTCATA+AGG + chr4_1:63251342-63251361 None:intergenic 35.0%
CTTATGAAAAGGTTTGTGTG+TGG - chr4_1:63251340-63251359 Msa0562950:intron 35.0%
! GAATTTTACTCGCTATGCAA+AGG - chr4_1:63251413-63251432 Msa0562950:intron 35.0%
!! TATGCAAAGGTTCAAGTTGT+AGG - chr4_1:63251426-63251445 Msa0562950:intron 35.0%
AAATTCAAGTGGGAGATTGT+TGG - chr4_1:63251515-63251534 Msa0562950:intron 35.0%
CTAAACACAAATTCCCATGT+TGG - chr4_1:63251566-63251585 Msa0562950:intron 35.0%
TATGTACCCCCATTAATTAG+AGG + chr4_1:63245422-63245441 None:intergenic 35.0%
GACAACTCAATGAAACTCTT+TGG + chr4_1:63247216-63247235 None:intergenic 35.0%
! AAGAGTTTCATTGAGTTGTC+GGG - chr4_1:63247216-63247235 Msa0562950:intron 35.0%
TTGTTAAACAAGTCGAAGGA+GGG + chr4_1:63247299-63247318 None:intergenic 35.0%
AAAGGAGTAGAAAAAGGAGA+AGG + chr4_1:63247324-63247343 None:intergenic 35.0%
AGAACACTCTTTATTCCGAA+GGG + chr4_1:63252055-63252074 None:intergenic 35.0%
AAGAACACTCTTTATTCCGA+AGG + chr4_1:63252056-63252075 None:intergenic 35.0%
! GAAGGTACATTAAACCGAAA+AGG + chr4_1:63252091-63252110 None:intergenic 35.0%
TGTACCTTCGGAATTAAGAA+TGG - chr4_1:63252102-63252121 Msa0562950:intron 35.0%
AAGACCATTCTTAATTCCGA+AGG + chr4_1:63247404-63247423 None:intergenic 35.0%
AGATCATTCTTAATTCCGAC+GGG + chr4_1:63247513-63247532 None:intergenic 35.0%
GTACTATGACCACTCAAATA+TGG + chr4_1:63247591-63247610 None:intergenic 35.0%
GGAGAACTTAAAGGTTAGAA+TGG - chr4_1:63247625-63247644 Msa0562950:intron 35.0%
GAACTTAAAGGTTAGAATGG+TGG - chr4_1:63252332-63252351 Msa0562950:intron 35.0%
GTGGAAACACTATATTTGAG+TGG - chr4_1:63252351-63252370 Msa0562950:intron 35.0%
! TGGTCTTAGTACCATATTTG+AGG - chr4_1:63247730-63247749 Msa0562950:intron 35.0%
GGTCTTAGTACCATATTTGA+GGG - chr4_1:63247731-63247750 Msa0562950:intron 35.0%
GAGATTTACACCCTCAAATA+TGG + chr4_1:63247744-63247763 None:intergenic 35.0%
! TTTTGACCCTCTGAATTATC+AGG - chr4_1:63252740-63252759 Msa0562950:intron 35.0%
TTTGACCCTCTGAATTATCA+GGG - chr4_1:63252741-63252760 Msa0562950:intron 35.0%
! TGTTTAACCCTCTGACTTTT+AGG + chr4_1:63252776-63252795 None:intergenic 35.0%
TCGCCAAATACTTATATAGG+TGG - chr4_1:63253120-63253139 Msa0562950:intron 35.0%
ACGGAAAAGATTCTTGGATT+AGG + chr4_1:63253279-63253298 None:intergenic 35.0%
AGAGTGGTTTATAAGATGGA+CGG + chr4_1:63253298-63253317 None:intergenic 35.0%
TAAATTAGACTCGACTTAGG+TGG - chr4_1:63253320-63253339 Msa0562950:intron 35.0%
CAAATGGAGTAATAGGGATT+TGG + chr4_1:63253418-63253437 None:intergenic 35.0%
ACTCCATTTGCTTTATAGGT+TGG - chr4_1:63253428-63253447 Msa0562950:intron 35.0%
CTCCATTTGCTTTATAGGTT+GGG - chr4_1:63253429-63253448 Msa0562950:intron 35.0%
CATGAGAAAGTTGAATGATG+AGG - chr4_1:63253455-63253474 Msa0562950:intron 35.0%
! TCTGATTGGCTAACAAAATC+AGG + chr4_1:63253511-63253530 None:intergenic 35.0%
CATATAAACATCACTACCAC+GGG + chr4_1:63253795-63253814 None:intergenic 35.0%
CGTGCTTAGTTTAGATTATC+TGG + chr4_1:63253904-63253923 None:intergenic 35.0%
GAGTTAATTCAATCCCATTG+TGG - chr4_1:63254010-63254029 Msa0562950:intron 35.0%
TTAAGTTAAGGTCACATGGA+CGG + chr4_1:63254052-63254071 None:intergenic 35.0%
CCAATTAAGTTAAGGTCACA+TGG + chr4_1:63254056-63254075 None:intergenic 35.0%
CCATGTGACCTTAACTTAAT+TGG - chr4_1:63254053-63254072 Msa0562950:intron 35.0%
TGGAAAAGTGATAATCTCGT+TGG - chr4_1:63254078-63254097 Msa0562950:intron 35.0%
! GGAGTATTATGTAGATGTTG+AGG - chr4_1:63254099-63254118 Msa0562950:intron 35.0%
!! GGAAAAAAAACAGCCGATTT+TGG - chr4_1:63254195-63254214 Msa0562950:intron 35.0%
! CGATTTTGGACATGGATATA+TGG - chr4_1:63254209-63254228 Msa0562950:intron 35.0%
! GGAATTCAAGTGTTTTCACT+TGG - chr4_1:63254263-63254282 Msa0562950:intron 35.0%
AGACCAAATACATGGTGTTT+AGG - chr4_1:63254397-63254416 Msa0562950:intron 35.0%
GTACCTAAACACCATGTATT+TGG + chr4_1:63254403-63254422 None:intergenic 35.0%
!! TACGAAGAGTTAGTCTTCTA+TGG + chr4_1:63254540-63254559 None:intergenic 35.0%
GTTTCTGATACTACTACATG+GGG + chr4_1:63254996-63255015 None:intergenic 35.0%
!! CGGTGATATTTTGCTTTTCA+CGG + chr4_1:63255053-63255072 None:intergenic 35.0%
CGTGAAAAGCAAAATATCAC+CGG - chr4_1:63255051-63255070 Msa0562950:intron 35.0%
ATGAATTTCTCAGTTTGTGG+CGG + chr4_1:63255103-63255122 None:intergenic 35.0%
TGGATGAATTTCTCAGTTTG+TGG + chr4_1:63255106-63255125 None:intergenic 35.0%
ACAAACTGAGAAATTCATCC+AGG - chr4_1:63255105-63255124 Msa0562950:intron 35.0%
ATGAAAACAGTATCACCACA+GGG + chr4_1:63255186-63255205 None:intergenic 35.0%
TTACTCCTCAATATGTGCAT+AGG - chr4_1:63255216-63255235 Msa0562950:intron 35.0%
GCTGTACAGAGAAGATAAAT+AGG - chr4_1:63255385-63255404 Msa0562950:intron 35.0%
AAGATAAATAGGGTTATGGC+AGG - chr4_1:63255396-63255415 Msa0562950:intron 35.0%
! CTACAGAGTATCAATATCCA+TGG - chr4_1:63255451-63255470 Msa0562950:intron 35.0%
CGAGAAGTTAGCAAAATACA+AGG - chr4_1:63255476-63255495 Msa0562950:intron 35.0%
! ATTGGACTTTTGATCCTGAA+AGG - chr4_1:63255613-63255632 Msa0562950:intron 35.0%
! GAAAAGGACATAAGGTTGAT+AGG - chr4_1:63255655-63255674 Msa0562950:intron 35.0%
TTGTAAGCAAGCAACATATC+CGG + chr4_1:63255729-63255748 None:intergenic 35.0%
AAGATGAAGGAAGAAGAGAA+AGG - chr4_1:63255768-63255787 Msa0562950:intron 35.0%
! AAGATTTGGAGTACAGAGAA+AGG + chr4_1:63255822-63255841 None:intergenic 35.0%
!! TAAGGAGTTTTTAGGCTTCA+TGG - chr4_1:63255929-63255948 Msa0562950:intron 35.0%
AGGCATGGATTCCTATACAT+AGG + chr4_1:63243415-63243434 None:intergenic 40.0%
AGGAATCCATGCCTTAGTAA+TGG - chr4_1:63243421-63243440 Msa0562950:three_prime_UTR 40.0%
GGAATCCATGCCTTAGTAAT+GGG - chr4_1:63243422-63243441 Msa0562950:three_prime_UTR 40.0%
! CACTAGCTATGTTTGGAATG+TGG + chr4_1:63243449-63243468 None:intergenic 40.0%
GCGTATAAAGGAACAAACCT+AGG - chr4_1:63243672-63243691 Msa0562950:CDS 40.0%
GTGGGATCTAATCAAATCCT+AGG + chr4_1:63243692-63243711 None:intergenic 40.0%
CATAATATATGCAAGGTCCG+GGG + chr4_1:63243828-63243847 None:intergenic 40.0%
GCATAATATATGCAAGGTCC+GGG + chr4_1:63243829-63243848 None:intergenic 40.0%
! TGAGTTTAGCTCAGTTGGTA+AGG + chr4_1:63243858-63243877 None:intergenic 40.0%
CGTTAATGTCATACAACTCC+GGG + chr4_1:63244010-63244029 None:intergenic 40.0%
ACACACGTTAGTGAAAGAGT+TGG - chr4_1:63244808-63244827 Msa0562950:intron 40.0%
TCATATACTCTGATTGGTGG+TGG - chr4_1:63244951-63244970 Msa0562950:intron 40.0%
CACAATTGTTGGAACATGTG+TGG - chr4_1:63245264-63245283 Msa0562950:intron 40.0%
AAAAAGTGGAAGTCCCACAT+CGG - chr4_1:63245354-63245373 Msa0562950:intron 40.0%
GGGGTGTACCTCTAATTAAT+GGG - chr4_1:63245411-63245430 Msa0562950:intron 40.0%
GGGTGTACCTCTAATTAATG+GGG - chr4_1:63245412-63245431 Msa0562950:intron 40.0%
GGTGTACCTCTAATTAATGG+GGG - chr4_1:63245413-63245432 Msa0562950:intron 40.0%
GGTGAGAAAAACACAAGAAG+GGG - chr4_1:63245797-63245816 Msa0562950:intron 40.0%
GTGAGAAAAACACAAGAAGG+GGG - chr4_1:63245798-63245817 Msa0562950:intron 40.0%
TGAGAAAAACACAAGAAGGG+GGG - chr4_1:63245799-63245818 Msa0562950:intron 40.0%
AAACTGAACACACTGATCAG+AGG - chr4_1:63245864-63245883 Msa0562950:intron 40.0%
! AAATCTCCTTGGAAGTGCAA+GGG + chr4_1:63246015-63246034 None:intergenic 40.0%
TTCAGCATTGCCAAATCTCT+AGG - chr4_1:63246377-63246396 Msa0562950:intron 40.0%
AAGCTTCAACAACGACTCTT+TGG + chr4_1:63246457-63246476 None:intergenic 40.0%
CATAGGACAACAACCAAATC+AGG + chr4_1:63246503-63246522 None:intergenic 40.0%
GAAATCCATTCCTTGTCCAA+AGG - chr4_1:63246535-63246554 Msa0562950:intron 40.0%
ATGTTCCTTTGGACAAGGAA+TGG + chr4_1:63246543-63246562 None:intergenic 40.0%
CATAGATGTTCCTTTGGACA+AGG + chr4_1:63246548-63246567 None:intergenic 40.0%
! TGTTTTCTTGTCTTGTAGCG+TGG - chr4_1:63246591-63246610 Msa0562950:intron 40.0%
TCACTGCAAAAGCTGTCTAT+TGG + chr4_1:63246759-63246778 None:intergenic 40.0%
! TCCAGTTGATATTCAGCTTC+TGG - chr4_1:63246808-63246827 Msa0562950:intron 40.0%
ACCAGAAGCTGAATATCAAC+TGG + chr4_1:63246812-63246831 None:intergenic 40.0%
! CAATGAAACTCTTTGGTGTG+TGG + chr4_1:63247209-63247228 None:intergenic 40.0%
CTTGTTAAACAAGTCGAAGG+AGG + chr4_1:63247300-63247319 None:intergenic 40.0%
!! GGACTTGTTAAACAAGTCGA+AGG + chr4_1:63247303-63247322 None:intergenic 40.0%
GGACAGAAAGGAGTAGAAAA+AGG + chr4_1:63247330-63247349 None:intergenic 40.0%
TTAATTCCGAAGGGACAGAA+AGG + chr4_1:63247342-63247361 None:intergenic 40.0%
! CTTAAGACCACAATCCCTTT+TGG - chr4_1:63247369-63247388 Msa0562950:intron 40.0%
CGAAGGGACATTAAACCAAA+AGG + chr4_1:63247387-63247406 None:intergenic 40.0%
TGTCCCTTCGGAATTAAGAA+TGG - chr4_1:63247397-63247416 Msa0562950:intron 40.0%
TGGAATAAACAATGTCCCGT+CGG - chr4_1:63247495-63247514 Msa0562950:intron 40.0%
GTGGTAACACCATATTTGAG+TGG - chr4_1:63247579-63247598 Msa0562950:intron 40.0%
! TTGAGGGTGTAAATCTCGAA+CGG - chr4_1:63247747-63247766 Msa0562950:intron 40.0%
!!! TTGGACTTGTTTTATCCTGG+AGG - chr4_1:63247806-63247825 Msa0562950:intron 40.0%
TGTGGATTTCACAGTGTTTG+TGG + chr4_1:63248132-63248151 None:intergenic 40.0%
TCACCTAAAAAACGGTACCA+AGG - chr4_1:63248363-63248382 Msa0562950:intron 40.0%
! CGTTAGAAGCATACTTTCCT+TGG + chr4_1:63248383-63248402 None:intergenic 40.0%
ATAGGTTCAGAGCTCTTGAT+GGG + chr4_1:63248471-63248490 None:intergenic 40.0%
TATAGGTTCAGAGCTCTTGA+TGG + chr4_1:63248472-63248491 None:intergenic 40.0%
! CTTTTCCTGACAAGAGTGAA+TGG + chr4_1:63248616-63248635 None:intergenic 40.0%
TACTAGTGAGTTCAACTCTC+GGG + chr4_1:63249130-63249149 None:intergenic 40.0%
CTACTAGTGAGTTCAACTCT+CGG + chr4_1:63249131-63249150 None:intergenic 40.0%
GCCTATGAATGTGTGTTCAT+TGG - chr4_1:63249152-63249171 Msa0562950:intron 40.0%
CCCAATGAACACACATTCAT+AGG + chr4_1:63249156-63249175 None:intergenic 40.0%
! TAATGGGAGCACAACATTAG+TGG - chr4_1:63249308-63249327 Msa0562950:intron 40.0%
! AATGGGAGCACAACATTAGT+GGG - chr4_1:63249309-63249328 Msa0562950:intron 40.0%
CGAGATGTTATAGAACCTCA+AGG - chr4_1:63249426-63249445 Msa0562950:intron 40.0%
GATGTTATAGAACCTCAAGG+AGG - chr4_1:63249429-63249448 Msa0562950:intron 40.0%
GGAACTAAAACCTGATGGTA+CGG - chr4_1:63249668-63249687 Msa0562950:intron 40.0%
TATTCATCAACCGTACCATC+AGG + chr4_1:63249681-63249700 None:intergenic 40.0%
!! TGGTACGGTTGATGAATACA+AGG - chr4_1:63249683-63249702 Msa0562950:intron 40.0%
TACTATCGAGTTATGAACGG+CGG + chr4_1:63249815-63249834 None:intergenic 40.0%
CCATGAATCGCAAAACTTTC+AGG + chr4_1:63249904-63249923 None:intergenic 40.0%
! CCTGAAAGTTTTGCGATTCA+TGG - chr4_1:63249901-63249920 Msa0562950:intron 40.0%
AAAACTAGTGGAGAAGCAAG+TGG - chr4_1:63250689-63250708 Msa0562950:intron 40.0%
CTAGCTACTCTCAAAAGGAA+CGG - chr4_1:63250869-63250888 Msa0562950:intron 40.0%
CCATCCTATTGGATGTGTTT+AGG + chr4_1:63250968-63250987 None:intergenic 40.0%
CCTAAACACATCCAATAGGA+TGG - chr4_1:63250965-63250984 Msa0562950:intron 40.0%
ATGATTCCTGTAGTGACAGA+AGG - chr4_1:63251114-63251133 Msa0562950:intron 40.0%
TAGACTCACCTATACGAATG+TGG - chr4_1:63251212-63251231 Msa0562950:intron 40.0%
CCTTAGTTCCACATTCGTAT+AGG + chr4_1:63251223-63251242 None:intergenic 40.0%
CCTATACGAATGTGGAACTA+AGG - chr4_1:63251220-63251239 Msa0562950:intron 40.0%
!! ACACTAGTTCTACCCAACAT+GGG + chr4_1:63251582-63251601 None:intergenic 40.0%
!! AACACTAGTTCTACCCAACA+TGG + chr4_1:63251583-63251602 None:intergenic 40.0%
GGGGTGTACCTCTAATTAAT+GGG - chr4_1:63245411-63245430 Msa0562950:intron 40.0%
GGGTGTACCTCTAATTAATG+GGG - chr4_1:63245412-63245431 Msa0562950:intron 40.0%
GGTGTACCTCTAATTAATGG+GGG - chr4_1:63245413-63245432 Msa0562950:intron 40.0%
! CAATGAAACTCTTTGGTGTG+TGG + chr4_1:63247209-63247228 None:intergenic 40.0%
CGTCAACACAAGTCAAGAAA+GGG + chr4_1:63251963-63251982 None:intergenic 40.0%
TCGTCAACACAAGTCAAGAA+AGG + chr4_1:63251964-63251983 None:intergenic 40.0%
CTTGTTAAACAAGTCGAAGG+AGG + chr4_1:63247300-63247319 None:intergenic 40.0%
!! GGACTTGTTAAACAAGTCGA+AGG + chr4_1:63247303-63247322 None:intergenic 40.0%
GGACAGAAAGGAGTAGAAAA+AGG + chr4_1:63247330-63247349 None:intergenic 40.0%
TTTATTCCGAAGGGACAGAA+AGG + chr4_1:63252046-63252065 None:intergenic 40.0%
! TTAAGACCACAGTCCCTTTT+CGG - chr4_1:63252074-63252093 Msa0562950:intron 40.0%
ATTAAACCGAAAAGGGACTG+TGG + chr4_1:63252083-63252102 None:intergenic 40.0%
TGGAATAAACAATGTCCCGT+CGG - chr4_1:63247495-63247514 Msa0562950:intron 40.0%
GTGGTAACACCATATTTGAG+TGG - chr4_1:63247579-63247598 Msa0562950:intron 40.0%
GTCTCAGCACCATAATAGAA+TGG - chr4_1:63252373-63252392 Msa0562950:intron 40.0%
! TTGAGGGTGTAAATCTCGAA+CGG - chr4_1:63247747-63247766 Msa0562950:intron 40.0%
! TAGTCTGCCTTGCACAATTT+TGG - chr4_1:63252545-63252564 Msa0562950:intron 40.0%
! AGTCTGCCTTGCACAATTTT+GGG - chr4_1:63252546-63252565 Msa0562950:intron 40.0%
GAGAACCCTGATAATTCAGA+GGG + chr4_1:63252749-63252768 None:intergenic 40.0%
AGAGAACCCTGATAATTCAG+AGG + chr4_1:63252750-63252769 None:intergenic 40.0%
TCTCTTCTCCTAAAAGTCAG+AGG - chr4_1:63252765-63252784 Msa0562950:intron 40.0%
CTCTTCTCCTAAAAGTCAGA+GGG - chr4_1:63252766-63252785 Msa0562950:intron 40.0%
GGCGAAGTAGTACCATAATT+CGG + chr4_1:63253105-63253124 None:intergenic 40.0%
AGATGGACGGAAAAGATTCT+TGG + chr4_1:63253285-63253304 None:intergenic 40.0%
ACTTAGGTGGAATGGTTTCA+GGG - chr4_1:63253333-63253352 Msa0562950:intron 40.0%
CATGAGAGAAAAGATACGAG+AGG - chr4_1:63253390-63253409 Msa0562950:intron 40.0%
TGCCCAACCTATAAAGCAAA+TGG + chr4_1:63253434-63253453 None:intergenic 40.0%
TGCAAAACAAGAGTGGTAGT+GGG - chr4_1:63253607-63253626 Msa0562950:intron 40.0%
CAAACCTATACACCCTAGAA+TGG - chr4_1:63253856-63253875 Msa0562950:intron 40.0%
!! GTGACTTGCTAGAAAGACAA+GGG + chr4_1:63253882-63253901 None:intergenic 40.0%
!! AAAACAGCCGATTTTGGACA+TGG - chr4_1:63254201-63254220 Msa0562950:intron 40.0%
!! CAAGTACGTTGATTTCGTAG+AGG - chr4_1:63254353-63254372 Msa0562950:intron 40.0%
TGGTCACAAGACCAAATACA+TGG - chr4_1:63254389-63254408 Msa0562950:intron 40.0%
! TCTCCAAGACAAAGTGGATT+GGG + chr4_1:63254944-63254963 None:intergenic 40.0%
TACTACTACATGGGGAAAAG+TGG + chr4_1:63254988-63255007 None:intergenic 40.0%
! ATTTTCCTTACATTCCCCTG+TGG - chr4_1:63255168-63255187 Msa0562950:intron 40.0%
TGAAAACAGTATCACCACAG+GGG + chr4_1:63255185-63255204 None:intergenic 40.0%
CATGAAAACAGTATCACCAC+AGG + chr4_1:63255187-63255206 None:intergenic 40.0%
TTGAGCCTATGCACATATTG+AGG + chr4_1:63255224-63255243 None:intergenic 40.0%
ATACAAGGATGAGTTTGCCA+AGG - chr4_1:63255491-63255510 Msa0562950:intron 40.0%
TACAAGGATGAGTTTGCCAA+GGG - chr4_1:63255492-63255511 Msa0562950:intron 40.0%
AGCCTCTTAGTATTAGTGCT+CGG - chr4_1:63255547-63255566 Msa0562950:intron 40.0%
TTAGTATTAGTGCTCGGCAT+AGG - chr4_1:63255553-63255572 Msa0562950:intron 40.0%
TAGTATTAGTGCTCGGCATA+GGG - chr4_1:63255554-63255573 Msa0562950:intron 40.0%
CGTAAAGAAGTTCTTCTTGC+TGG - chr4_1:63255585-63255604 Msa0562950:intron 40.0%
TTCTTCTTGCTGGAGAAGAT+TGG - chr4_1:63255595-63255614 Msa0562950:intron 40.0%
! GACTTTTGATCCTGAAAGGA+AGG - chr4_1:63255617-63255636 Msa0562950:intron 40.0%
!! TAAGGTTGATAGGATAGCTG+CGG - chr4_1:63255665-63255684 Msa0562950:intron 40.0%
!! TAGGTTGATGGATAAGATGC+CGG - chr4_1:63255707-63255726 Msa0562950:intron 40.0%
! TACAGAGAAAGGCATACCAA+AGG + chr4_1:63255811-63255830 None:intergenic 40.0%
!! GTTTGGCCTTGCTATTATCT+CGG - chr4_1:63256004-63256023 Msa0562950:intron 40.0%
!! TTTGGCCTTGCTATTATCTC+GGG - chr4_1:63256005-63256024 Msa0562950:intron 40.0%
CTGCTTTGATGAATGCATGT+TGG - chr4_1:63256078-63256097 Msa0562950:intron 40.0%
GGAAATTGTAATTGCCTGCT+AGG - chr4_1:63256099-63256118 Msa0562950:intron 40.0%
ATATTCCTCAAGAGGTGGGA+TGG - chr4_1:63243257-63243276 Msa0562950:three_prime_UTR 45.0%
GAGTGTGAAGGCCTATGTAT+AGG - chr4_1:63243401-63243420 Msa0562950:three_prime_UTR 45.0%
GGAATGTGGTCCCATTACTA+AGG + chr4_1:63243435-63243454 None:intergenic 45.0%
!! GGTGATGCCGGTTTCAAAAT+AGG - chr4_1:63244219-63244238 Msa0562950:intron 45.0%
! GGGGGTGTACCTCTAATTAA+TGG - chr4_1:63245410-63245429 Msa0562950:intron 45.0%
GCTCACACAGTACAATCTGA+AGG - chr4_1:63245776-63245795 Msa0562950:intron 45.0%
GAGAAAAACACAAGAAGGGG+GGG - chr4_1:63245800-63245819 Msa0562950:intron 45.0%
AGAAAAACACAAGAAGGGGG+GGG - chr4_1:63245801-63245820 Msa0562950:intron 45.0%
!! TACTGGTTCCTTCCACAATC+CGG - chr4_1:63245975-63245994 Msa0562950:intron 45.0%
TACTACTTCCGGATTGTGGA+AGG + chr4_1:63245986-63246005 None:intergenic 45.0%
ACTGTACTACTTCCGGATTG+TGG + chr4_1:63245990-63246009 None:intergenic 45.0%
! AATCTCCTTGGAAGTGCAAG+GGG + chr4_1:63246014-63246033 None:intergenic 45.0%
! GAAATCTCCTTGGAAGTGCA+AGG + chr4_1:63246016-63246035 None:intergenic 45.0%
! TAGCTTGTGTGCTTGAGCAA+AGG + chr4_1:63246090-63246109 None:intergenic 45.0%
GGAGTGAAGACCTAGAGATT+TGG + chr4_1:63246390-63246409 None:intergenic 45.0%
GTCCAAAGGAACATCTATGC+AGG - chr4_1:63246549-63246568 Msa0562950:intron 45.0%
GTGGACACAAAACAGAGTAG+TGG - chr4_1:63246610-63246629 Msa0562950:intron 45.0%
! AAACAGAGTAGTGGAGAACG+TGG - chr4_1:63246619-63246638 Msa0562950:intron 45.0%
! GAAGGCATGTGCTTGCAATT+TGG + chr4_1:63246678-63246697 None:intergenic 45.0%
TGGTGAAATGGCTTCTGATG+AGG - chr4_1:63246828-63246847 Msa0562950:intron 45.0%
GCTTCTGATGATATGGCTTC+TGG - chr4_1:63246883-63246902 Msa0562950:intron 45.0%
TTCAGTAGCAAGTTGCCTTC+AGG - chr4_1:63246988-63247007 Msa0562950:intron 45.0%
! CTTTGGTGTGTGGATTGTGT+TGG + chr4_1:63247199-63247218 None:intergenic 45.0%
TCTACTCCTTTCTGTCCCTT+CGG - chr4_1:63247333-63247352 Msa0562950:intron 45.0%
GTCTCAGCGCCATAATAGAA+TGG - chr4_1:63247669-63247688 Msa0562950:intron 45.0%
GTTAACCGCACAGTTGTAGT+TGG - chr4_1:63247787-63247806 Msa0562950:intron 45.0%
CAAGTCCAACTACAACTGTG+CGG + chr4_1:63247795-63247814 None:intergenic 45.0%
!!! GACTTGTTTTATCCTGGAGG+CGG - chr4_1:63247809-63247828 Msa0562950:intron 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG + chr4_1:63247881-63247900 None:intergenic 45.0%
GGAGATTTGATGTACGTCCA+CGG + chr4_1:63248195-63248214 None:intergenic 45.0%
GTGTACCATTCACTCTTGTC+AGG - chr4_1:63248608-63248627 Msa0562950:intron 45.0%
ACTAGTGAGTTCAACTCTCG+GGG + chr4_1:63249129-63249148 None:intergenic 45.0%
! AGGAATAATGGGGGAACTAG+TGG - chr4_1:63249279-63249298 Msa0562950:intron 45.0%
! GGAATAATGGGGGAACTAGT+GGG - chr4_1:63249280-63249299 Msa0562950:intron 45.0%
! GAATAATGGGGGAACTAGTG+GGG - chr4_1:63249281-63249300 Msa0562950:intron 45.0%
! AATAATGGGGGAACTAGTGG+GGG - chr4_1:63249282-63249301 Msa0562950:intron 45.0%
! ATGGGAGCACAACATTAGTG+GGG - chr4_1:63249310-63249329 Msa0562950:intron 45.0%
AAGGCTCTCCTTGTAGTCAA+AGG - chr4_1:63249702-63249721 Msa0562950:intron 45.0%
AGTTATGAACGGCGGCTAAA+GGG + chr4_1:63249807-63249826 None:intergenic 45.0%
TTTCACGACATCGGCAATGT+CGG + chr4_1:63250407-63250426 None:intergenic 45.0%
GCACAAGAGTTTCACGACAT+CGG + chr4_1:63250416-63250435 None:intergenic 45.0%
TGCACATTGAGCATCACTAG+AGG - chr4_1:63250596-63250615 Msa0562950:intron 45.0%
TGCTAGTTGAGATCCCTTAG+TGG - chr4_1:63250722-63250741 Msa0562950:intron 45.0%
GAGAGCTAGCTACTCTCAAA+AGG - chr4_1:63250864-63250883 Msa0562950:intron 45.0%
TGCCCAAAGGTCATAAGTGA+TGG - chr4_1:63250994-63251013 Msa0562950:intron 45.0%
GACTGGAGATCCCAAGAAAT+AGG - chr4_1:63251032-63251051 Msa0562950:intron 45.0%
TCTCATCCTTCTGTCACTAC+AGG + chr4_1:63251123-63251142 None:intergenic 45.0%
ACGAATGTGGAACTAAGGGT+CGG - chr4_1:63251225-63251244 Msa0562950:intron 45.0%
! AACTAAGGGTCGGTTCCTAT+GGG - chr4_1:63251235-63251254 Msa0562950:intron 45.0%
TATTCTGCCTCGAATCCCAT+AGG + chr4_1:63251253-63251272 None:intergenic 45.0%
! CCTAGAGCGTTCGTTAAAAC+CGG - chr4_1:63251273-63251292 Msa0562950:intron 45.0%
! CTAGAGCGTTCGTTAAAACC+GGG - chr4_1:63251274-63251293 Msa0562950:intron 45.0%
TCTAAAAGCCCGTGCGTTTA+TGG + chr4_1:63251314-63251333 None:intergenic 45.0%
GGAGATTGTTGGAACATGTG+TGG - chr4_1:63251526-63251545 Msa0562950:intron 45.0%
GTGTGTGTTCCATCTGATGT+GGG + chr4_1:63251631-63251650 None:intergenic 45.0%
TGTGTGTGTTCCATCTGATG+TGG + chr4_1:63251632-63251651 None:intergenic 45.0%
! GGGGGTGTACCTCTAATTAA+TGG - chr4_1:63245410-63245429 Msa0562950:intron 45.0%
TCTACTCCTTTCTGTCCCTT+CGG - chr4_1:63247333-63247352 Msa0562950:intron 45.0%
AGTAGTTAACCGCACAGTTG+TGG - chr4_1:63247783-63247802 Msa0562950:intron 45.0%
TTAACCGCACAGTTGTGGTT+GGG - chr4_1:63252492-63252511 Msa0562950:intron 45.0%
!!! TGGTTGGGCTTGTTTTATCC+TGG - chr4_1:63252507-63252526 Msa0562950:intron 45.0%
!!! TTGGGCTTGTTTTATCCTGG+AGG - chr4_1:63252510-63252529 Msa0562950:intron 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG + chr4_1:63247881-63247900 None:intergenic 45.0%
TCAGAGGGTCAAAACTCGAA+AGG + chr4_1:63252734-63252753 None:intergenic 45.0%
TAGACTCGACTTAGGTGGAA+TGG - chr4_1:63253325-63253344 Msa0562950:intron 45.0%
GACTTAGGTGGAATGGTTTC+AGG - chr4_1:63253332-63253351 Msa0562950:intron 45.0%
TCAACAAATGCTACCTTGCC+TGG - chr4_1:63253367-63253386 Msa0562950:intron 45.0%
! CGTATCTTTTCTCTCATGCC+AGG + chr4_1:63253388-63253407 None:intergenic 45.0%
CTGGATCTGCAAAACAAGAG+TGG - chr4_1:63253600-63253619 Msa0562950:intron 45.0%
CTGCAAAACAAGAGTGGTAG+TGG - chr4_1:63253606-63253625 Msa0562950:intron 45.0%
TGTGTGATGTGTGTATGTGG+TGG + chr4_1:63253685-63253704 None:intergenic 45.0%
GTGTGTGTGATGTGTGTATG+TGG + chr4_1:63253688-63253707 None:intergenic 45.0%
GATGTGTGTGGATGTGTGTA+GGG + chr4_1:63253713-63253732 None:intergenic 45.0%
TGATGTGTGTGGATGTGTGT+AGG + chr4_1:63253714-63253733 None:intergenic 45.0%
CACACATCCACACACATCAA+TGG - chr4_1:63253715-63253734 Msa0562950:intron 45.0%
ATCCACACACATCAATGGTC+AGG - chr4_1:63253720-63253739 Msa0562950:intron 45.0%
ATCCTGACCATTGATGTGTG+TGG + chr4_1:63253725-63253744 None:intergenic 45.0%
! TGACATAGCTTGTGTGCCAT+TGG + chr4_1:63253761-63253780 None:intergenic 45.0%
ATGGCACACAAGCTATGTCA+TGG - chr4_1:63253761-63253780 Msa0562950:intron 45.0%
!! TGTCATGGAAGTATTTCCCG+TGG - chr4_1:63253776-63253795 Msa0562950:intron 45.0%
GAAAGACAAGGGCCATTCTA+GGG + chr4_1:63253871-63253890 None:intergenic 45.0%
AGAAAGACAAGGGCCATTCT+AGG + chr4_1:63253872-63253891 None:intergenic 45.0%
!! GGTGACTTGCTAGAAAGACA+AGG + chr4_1:63253883-63253902 None:intergenic 45.0%
! GTGTTTTCACTTGGACGTTG+CGG - chr4_1:63254272-63254291 Msa0562950:intron 45.0%
! TGTTTTCACTTGGACGTTGC+GGG - chr4_1:63254273-63254292 Msa0562950:intron 45.0%
! AAACAGACGGGCTTCTAAAC+AGG - chr4_1:63254912-63254931 Msa0562950:intron 45.0%
!! AGACAAAGTGGATTGGGCTT+GGG + chr4_1:63254938-63254957 None:intergenic 45.0%
!! AAGACAAAGTGGATTGGGCT+TGG + chr4_1:63254939-63254958 None:intergenic 45.0%
AAGCCCAATCCACTTTGTCT+TGG - chr4_1:63254938-63254957 Msa0562950:intron 45.0%
CTCTCCAAGACAAAGTGGAT+TGG + chr4_1:63254945-63254964 None:intergenic 45.0%
CAATCCACTTTGTCTTGGAG+AGG - chr4_1:63254943-63254962 Msa0562950:intron 45.0%
GTGGCAGCGATGAATATGAT+GGG + chr4_1:63254969-63254988 None:intergenic 45.0%
AGTGGCAGCGATGAATATGA+TGG + chr4_1:63254970-63254989 None:intergenic 45.0%
TGGCGGTTGAAGATCAACTT+CGG + chr4_1:63255086-63255105 None:intergenic 45.0%
TATCACCACAGGGGAATGTA+AGG + chr4_1:63255176-63255195 None:intergenic 45.0%
AGGAAAAGCTGCTAGTTCAG+CGG - chr4_1:63255416-63255435 Msa0562950:intron 45.0%
TGCCGAGCACTAATACTAAG+AGG + chr4_1:63255552-63255571 None:intergenic 45.0%
GTCTTCATCTCCTTCCTTTC+AGG + chr4_1:63255630-63255649 None:intergenic 45.0%
AAAGGAAGGAGATGAAGACG+AGG - chr4_1:63255631-63255650 Msa0562950:intron 45.0%
AAAGTGGGCGAAGAAGATGA+AGG - chr4_1:63255755-63255774 Msa0562950:intron 45.0%
GCAAGGCCAAACTCTTGTAA+GGG + chr4_1:63255996-63256015 None:intergenic 45.0%
AGCAAGGCCAAACTCTTGTA+AGG + chr4_1:63255997-63256016 None:intergenic 45.0%
!! TTGGCCTTGCTATTATCTCG+GGG - chr4_1:63256006-63256025 Msa0562950:intron 45.0%
TTTCCCCCGAGATAATAGCA+AGG + chr4_1:63256013-63256032 None:intergenic 45.0%
! TTTAGCACAGAGTACCTAGC+AGG + chr4_1:63256116-63256135 None:intergenic 45.0%
TGTGCTAAACTCCCTTACCA+AGG - chr4_1:63256127-63256146 Msa0562950:intron 45.0%
!! CAAGAACTTGGCCTTGGTAA+GGG + chr4_1:63256141-63256160 None:intergenic 45.0%
!! ACAAGAACTTGGCCTTGGTA+AGG + chr4_1:63256142-63256161 None:intergenic 45.0%
CAAGAACAAGAACTTGGCCT+TGG + chr4_1:63256147-63256166 None:intergenic 45.0%
!!! TTGATATATATTTTATTATT+TGG - chr4_1:63251724-63251743 Msa0562950:intron 5.0%
!!! TAAAGTAAAATAAATATTTT+GGG + chr4_1:63254447-63254466 None:intergenic 5.0%
!!! ATAAAGTAAAATAAATATTT+TGG + chr4_1:63254448-63254467 None:intergenic 5.0%
TATTCAGTGTTACGGGGGAG+AGG - chr4_1:63243228-63243247 Msa0562950:three_prime_UTR 50.0%
GTGGTCCCATTACTAAGGCA+TGG + chr4_1:63243430-63243449 None:intergenic 50.0%
ATCTAGCTGTGGAGATGCCA+TGG - chr4_1:63243630-63243649 Msa0562950:CDS 50.0%
TATATGCAAGGTCCGGGGTT+CGG + chr4_1:63243823-63243842 None:intergenic 50.0%
! CCTCGTGAGTTTAGCTCAGT+TGG + chr4_1:63243863-63243882 None:intergenic 50.0%
CCAACTGAGCTAAACTCACG+AGG - chr4_1:63243860-63243879 Msa0562950:CDS 50.0%
GTGTGTGTTCCATCCGATGT+GGG + chr4_1:63245370-63245389 None:intergenic 50.0%
TGTGTGTGTTCCATCCGATG+TGG + chr4_1:63245371-63245390 None:intergenic 50.0%
GAAAAACACAAGAAGGGGGG+GGG - chr4_1:63245802-63245821 Msa0562950:intron 50.0%
AAAAACACAAGAAGGGGGGG+GGG - chr4_1:63245803-63245822 Msa0562950:intron 50.0%
AAGGGGGACTGTACTACTTC+CGG + chr4_1:63245997-63246016 None:intergenic 50.0%
! ATCTCCTTGGAAGTGCAAGG+GGG + chr4_1:63246013-63246032 None:intergenic 50.0%
TCTTGCAGTTGTGCTTGAGC+AGG + chr4_1:63246150-63246169 None:intergenic 50.0%
! ACAACGACTCTTTGGTGTGC+TGG + chr4_1:63246449-63246468 None:intergenic 50.0%
CGCCTGCATAGATGTTCCTT+TGG + chr4_1:63246554-63246573 None:intergenic 50.0%
CTTCTGGACCTCTTGTCTTC+AGG - chr4_1:63246899-63246918 Msa0562950:intron 50.0%
GTAGTGCTCCTGAAGACAAG+AGG + chr4_1:63246910-63246929 None:intergenic 50.0%
!! CTTCAGGAGCACTACTCTTC+AGG - chr4_1:63246915-63246934 Msa0562950:intron 50.0%
GCGCTGAGACCACTCAAATA+TGG + chr4_1:63247659-63247678 None:intergenic 50.0%
ACGTCTTAAAGAGAGCGACC+TGG - chr4_1:63247885-63247904 Msa0562950:intron 50.0%
! TACTAGGTTGAGTCACGACC+AGG + chr4_1:63247906-63247925 None:intergenic 50.0%
! CAGAGCTCTTGATGGGTCTA+TGG + chr4_1:63248464-63248483 None:intergenic 50.0%
! GAACTAGTGGGGGCTCTAAT+GGG - chr4_1:63249292-63249311 Msa0562950:intron 50.0%
! TGGGAGCACAACATTAGTGG+GGG - chr4_1:63249311-63249330 Msa0562950:intron 50.0%
GAGTTATGAACGGCGGCTAA+AGG + chr4_1:63249808-63249827 None:intergenic 50.0%
GAGCATCATTGGCAGTCCTT+AGG - chr4_1:63250359-63250378 Msa0562950:intron 50.0%
GGGCATTAGTCCCATCCTAT+TGG + chr4_1:63250979-63250998 None:intergenic 50.0%
AGGATGGGACTAATGCCCAA+AGG - chr4_1:63250981-63251000 Msa0562950:intron 50.0%
GATCTCCAGTCATGTAGGTC+GGG + chr4_1:63251023-63251042 None:intergenic 50.0%
GGATCTCCAGTCATGTAGGT+CGG + chr4_1:63251024-63251043 None:intergenic 50.0%
CTTGGGATCTCCAGTCATGT+AGG + chr4_1:63251028-63251047 None:intergenic 50.0%
GGAGTGGAGTACATAGCTAC+AGG - chr4_1:63251178-63251197 Msa0562950:intron 50.0%
! GAACTAAGGGTCGGTTCCTA+TGG - chr4_1:63251234-63251253 Msa0562950:intron 50.0%
!! CCGGTTTTAACGAACGCTCT+AGG + chr4_1:63251276-63251295 None:intergenic 50.0%
TGTGGAAGTCCCACATCAGA+TGG - chr4_1:63251619-63251638 Msa0562950:intron 50.0%
GTTAACCGCACAGTTGTGGT+TGG - chr4_1:63252491-63252510 Msa0562950:intron 50.0%
!!! GGCTTGTTTTATCCTGGAGG+CGG - chr4_1:63252513-63252532 Msa0562950:intron 50.0%
GCACTGCCCAAAATTGTGCA+AGG + chr4_1:63247859-63247878 None:intergenic 50.0%
ACGTCTTAAAGAGAGCGACC+TGG - chr4_1:63247885-63247904 Msa0562950:intron 50.0%
! TACTAGGTTGAGTCACGACC+AGG + chr4_1:63247906-63247925 None:intergenic 50.0%
! CTTTTCTCTCATGCCAGGCA+AGG + chr4_1:63253383-63253402 None:intergenic 50.0%
CACAAGCTATGGCACCAAAG+TGG + chr4_1:63253636-63253655 None:intergenic 50.0%
! TGCCATAGCTTGTGTGCCAT+TGG - chr4_1:63253642-63253661 Msa0562950:intron 50.0%
CACCAATGGCACACAAGCTA+TGG + chr4_1:63253756-63253775 None:intergenic 50.0%
GATGCAAGCTATGGCACCAA+TGG + chr4_1:63253661-63253680 None:intergenic 50.0%
! TGTGGTGGAGATGCAAGCTA+TGG + chr4_1:63253670-63253689 None:intergenic 50.0%
AATGGTCAGGATTTCCCCAC+TGG - chr4_1:63253733-63253752 Msa0562950:intron 50.0%
!! AGGGCCATTCTAGGGTGTAT+AGG + chr4_1:63253863-63253882 None:intergenic 50.0%
!! GAGAAGCACTAAGCTCAACG+TGG - chr4_1:63255027-63255046 Msa0562950:intron 50.0%
! TCAACTTCGGCAGCGTTTTC+CGG + chr4_1:63255073-63255092 None:intergenic 50.0%
AGCTGCTAGTTCAGCGGTAA+AGG - chr4_1:63255422-63255441 Msa0562950:intron 50.0%
TTTGCTAACTTCTCGCGCCA+TGG + chr4_1:63255471-63255490 None:intergenic 50.0%
ATGAGTTTGCCAAGGGAGTG+TGG - chr4_1:63255499-63255518 Msa0562950:intron 50.0%
! TGAGTTTGCCAAGGGAGTGT+GGG - chr4_1:63255500-63255519 Msa0562950:intron 50.0%
GAGATGAAGACGAGGCGAAA+AGG - chr4_1:63255639-63255658 Msa0562950:intron 50.0%
GACGAGGCGAAAAGGACATA+AGG - chr4_1:63255647-63255666 Msa0562950:intron 50.0%
ATAGGATAGCTGCGGAGAAG+AGG - chr4_1:63255673-63255692 Msa0562950:intron 50.0%
TAGGATAGCTGCGGAGAAGA+GGG - chr4_1:63255674-63255693 Msa0562950:intron 50.0%
AGAAGAGGGCAAACACTGCT+AGG - chr4_1:63255688-63255707 Msa0562950:intron 50.0%
! GGCAAACACTGCTAGGTTGA+TGG - chr4_1:63255695-63255714 Msa0562950:intron 50.0%
!! TGGCCTTGCTATTATCTCGG+GGG - chr4_1:63256007-63256026 Msa0562950:intron 50.0%
GTTGACCATCCCACCTCTTG+AGG + chr4_1:63243265-63243284 None:intergenic 55.0%
CTAGTGGTGAACGGTGATGC+CGG - chr4_1:63244207-63244226 Msa0562950:intron 55.0%
AGTGGAAGTCCCACATCGGA+TGG - chr4_1:63245358-63245377 Msa0562950:intron 55.0%
AAAACACAAGAAGGGGGGGG+GGG - chr4_1:63245804-63245823 Msa0562950:intron 55.0%
ATGCAGGCGAAGCCGTATTC+TGG - chr4_1:63246565-63246584 Msa0562950:intron 55.0%
TGAAGCTTGGACGCTCCTGA+AGG + chr4_1:63247006-63247025 None:intergenic 55.0%
AGTCGAAGGAGGGAGAAGAG+AGG + chr4_1:63247289-63247308 None:intergenic 55.0%
! GGAACTAGTGGGGGCTCTAA+TGG - chr4_1:63249291-63249310 Msa0562950:intron 55.0%
GGTAACCCGACCTACATGAC+TGG - chr4_1:63251015-63251034 Msa0562950:intron 55.0%
! GTCGGTTCCTATGGGATTCG+AGG - chr4_1:63251243-63251262 Msa0562950:intron 55.0%
AAAACCGGGACACACGTGCA+AGG - chr4_1:63251288-63251307 Msa0562950:intron 55.0%
CGTGCAAGGCCATAAACGCA+CGG - chr4_1:63251302-63251321 Msa0562950:intron 55.0%
GTGCAAGGCCATAAACGCAC+GGG - chr4_1:63251303-63251322 Msa0562950:intron 55.0%
AGTCGAAGGAGGGAGAAGAG+AGG + chr4_1:63247289-63247308 None:intergenic 55.0%
CAAGCCCAACCACAACTGTG+CGG + chr4_1:63252499-63252518 None:intergenic 55.0%
!! GTGGTAGTGGGACTCCACTT+TGG - chr4_1:63253619-63253638 Msa0562950:intron 55.0%
GATTTCCCCACTGGCACCAA+TGG - chr4_1:63253742-63253761 Msa0562950:intron 55.0%
!! TGTGTGCCATTGGTGCCAGT+GGG + chr4_1:63253751-63253770 None:intergenic 55.0%
!! TTGTGTGCCATTGGTGCCAG+TGG + chr4_1:63253752-63253771 None:intergenic 55.0%
TGGGCCTCTCCAAGACAAAG+TGG + chr4_1:63254950-63254969 None:intergenic 55.0%
! GAGTTTGCCAAGGGAGTGTG+GGG - chr4_1:63255501-63255520 Msa0562950:intron 55.0%
! AGTTTGCCAAGGGAGTGTGG+GGG - chr4_1:63255502-63255521 Msa0562950:intron 55.0%
!! CAAGGGAGTGTGGGGGTATT+GGG - chr4_1:63255509-63255528 Msa0562950:intron 55.0%
!! TGTGGGGGTATTGGGAGCTA+GGG - chr4_1:63255517-63255536 Msa0562950:intron 55.0%
CAGTCCCCCTTGCACTTCCA+AGG - chr4_1:63246006-63246025 Msa0562950:intron 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG - chr4_1:63247814-63247833 Msa0562950:intron 60.0%
! ATGGCCTTGCACGTGTGTCC+CGG + chr4_1:63251295-63251314 None:intergenic 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG - chr4_1:63247814-63247833 Msa0562950:intron 60.0%
!! GTGTGCCATTGGTGCCAGTG+GGG + chr4_1:63253750-63253769 None:intergenic 60.0%
CCAATACCCCCACACTCCCT+TGG + chr4_1:63255511-63255530 None:intergenic 60.0%
! CCAAGGGAGTGTGGGGGTAT+TGG - chr4_1:63255508-63255527 Msa0562950:intron 60.0%
!! GTGTGGGGGTATTGGGAGCT+AGG - chr4_1:63255516-63255535 Msa0562950:intron 60.0%
!! GTGGGGGTATTGGGAGCTAG+GGG - chr4_1:63255518-63255537 Msa0562950:intron 60.0%
! GGTATTGGGAGCTAGGGGCA+TGG - chr4_1:63255523-63255542 Msa0562950:intron 60.0%
TGTGGCCAGGTTCCGAACCC+CGG - chr4_1:63243808-63243827 Msa0562950:CDS 65.0%
AAGGTCCGGGGTTCGGAACC+TGG + chr4_1:63243816-63243835 None:intergenic 65.0%
CAAATGGGGCAGAGCCGCAG+AGG + chr4_1:63244425-63244444 None:intergenic 65.0%
CAAATGGGGCAGAGCCGCAG+AGG + chr4_1:63244425-63244444 None:intergenic 65.0%
CTATCAACCACGCCGCCTCC+AGG + chr4_1:63247824-63247843 None:intergenic 65.0%
CTATCAACCACGCCGCCTCC+AGG + chr4_1:63247824-63247843 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 63243168 63256243 63243168 ID=Msa0562950;Name=Msa0562950
chr4_1 mRNA 63243168 63256243 63243168 ID=Msa0562950-mRNA-1;Parent=Msa0562950;Name=Msa0562950-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0.5|0.5|1|1|2|443|137
chr4_1 exon 63243168 63244017 63243168 ID=Msa0562950-mRNA-1:exon:20032;Parent=Msa0562950-mRNA-1
chr4_1 exon 63256237 63256243 63256237 ID=Msa0562950-mRNA-1:exon:20031;Parent=Msa0562950-mRNA-1
chr4_1 CDS 63256237 63256243 63256237 ID=Msa0562950-mRNA-1:cds;Parent=Msa0562950-mRNA-1
chr4_1 CDS 63243611 63244017 63243611 ID=Msa0562950-mRNA-1:cds;Parent=Msa0562950-mRNA-1
chr4_1 three_prime_UTR 63243168 63243610 63243168 ID=Msa0562950-mRNA-1:three_prime_utr;Parent=Msa0562950-mRNA-1
Gene Sequence

>Msa0562950

ATGGAAAAGAAGATAAATAGGGTTATGGCAGGAAAAGCTGCTAGTTCAGCGGTAAAGGCGATAGCTACAGAGTATCAATATCCATGGCGCGAGAAGTTAGCAAAATACAAGGATGAGTTTGCCAAGGGAGTGTGGGGGTATTGGGAGCTAGGGGCATGGAAGCCTCTTAGTATTAGTGCTCGGCATAGGGCAAGAATTCGTAAAGAAGTTCTTCTTGCTGGAGAAGATTGGACTTTTGATCCTGAAAGGAAGGAGATGAAGACGAGGCGAAAAGGACATAAGGTTGATAGGATAGCTGCGGAGAAGAGGGCAAACACTGCTAGGTTGATGGATAAGATGCCGGATATGTTGCTTGCTTACAAGAAGAAAAAGTGGGCGAAGAAGATGAAGGAAGAAGAGAAAGGCAAATTCTGA
Protein sequence

>Msa0562950

MEKKINRVMAGKAASSAVKAIATEYQYPWREKLAKYKDEFAKGVWGYWELGAWKPLSISARHRARIRKEVLLAGEDWTFDPERKEMKTRRKGHKVDRIAAEKRANTARLMDKMPDMLLAYKKKKWAKKMKEEEKGKF*