AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0567250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0567250 MtrunA17_Chr8g0382071 98.361 1037 17 0 1 1037 1 1037 0.0 2084
Msa0567250 MtrunA17_Chr1g0173111 78.468 1031 219 2 5 1035 4 1031 0.0 1677
Msa0567250 MtrunA17_Chr5g0401211 63.690 1019 360 7 1 1014 1 1014 0.0 1293
Msa0567250 MtrunA17_Chr8g0355421 63.006 1038 358 6 5 1034 4 1023 0.0 1283
Msa0567250 MtrunA17_Chr3g0134771 62.414 1019 375 6 1 1014 1 1016 0.0 1266
Msa0567250 MtrunA17_Chr4g0020551 69.630 866 255 5 82 942 15 877 0.0 1229
Msa0567250 MtrunA17_Chr4g0054021 63.248 936 335 4 82 1014 8 937 0.0 1180
Msa0567250 MtrunA17_Chr2g0298871 48.948 1046 467 16 14 1014 46 1069 0.0 894
Msa0567250 MtrunA17_Chr4g0002331 48.795 1037 482 15 12 1016 64 1083 0.0 885
Msa0567250 MtrunA17_Chr6g0456201 47.379 954 458 16 94 1017 70 1009 0.0 824
Msa0567250 MtrunA17_Chr7g0260401 44.177 1039 525 17 15 1019 27 1044 0.0 776
Msa0567250 MtrunA17_Chr8g0340261 46.528 576 257 13 460 1017 2 544 4.02e-154 468
Msa0567250 MtrunA17_Chr2g0334231 46.882 465 219 9 12 462 54 504 7.90e-107 343
Msa0567250 MtrunA17_Chr8g0340271 47.884 378 184 6 94 458 69 446 9.10e-106 340
Msa0567250 MtrunA17_Chr4g0005551 28.234 974 613 25 99 1036 61 984 7.30e-99 335
Msa0567250 MtrunA17_Chr7g0263361 32.062 839 473 20 119 874 31 855 7.76e-99 336
Msa0567250 MtrunA17_Chr8g0346461 28.558 1026 573 30 119 1000 19 1028 1.40e-93 321
Msa0567250 MtrunA17_Chr5g0447521 27.254 976 627 22 93 1031 95 1024 1.12e-90 313
Msa0567250 MtrunA17_Chr3g0134951 29.298 983 583 28 120 1008 3 967 1.26e-84 295
Msa0567250 MtrunA17_Chr2g0334221 44.118 306 151 8 493 783 49 349 4.34e-63 218
Msa0567250 MtrunA17_Chr2g0334201 52.410 166 78 1 852 1016 1 166 6.02e-51 177
Msa0567250 MtrunA17_Chr4g0072131 24.695 737 443 21 119 829 24 674 1.61e-49 190
Msa0567250 MtrunA17_Chr4g0065481 25.405 740 434 25 119 829 22 672 1.33e-48 187
Msa0567250 MtrunA17_Chr8g0335291 25.496 706 434 23 132 822 35 663 7.93e-48 185
Msa0567250 MtrunA17_Chr2g0298031 24.390 738 445 21 119 829 26 677 7.95e-48 185
Msa0567250 MtrunA17_Chr1g0147981 25.543 736 438 27 119 829 38 688 1.05e-47 185
Msa0567250 MtrunA17_Chr4g0059961 24.792 722 447 22 115 822 21 660 4.33e-47 182
Msa0567250 MtrunA17_Chr8g0365021 24.217 702 443 20 132 822 103 726 2.77e-46 181
Msa0567250 MtrunA17_Chr8g0381711 23.639 808 503 23 106 873 4 737 4.90e-46 179
Msa0567250 MtrunA17_Chr2g0333721 23.961 722 445 20 119 822 19 654 1.27e-45 178
Msa0567250 MtrunA17_Chr1g0148031 24.652 718 442 21 132 829 33 671 2.05e-45 177
Msa0567250 MtrunA17_Chr3g0138931 24.966 733 446 23 119 829 21 671 4.04e-45 176
Msa0567250 MtrunA17_Chr2g0304941 25.174 719 437 24 132 829 34 672 1.07e-44 175
Msa0567250 MtrunA17_Chr6g0452721 24.255 705 437 23 133 822 36 658 4.52e-41 164
Msa0567250 MtrunA17_Chr7g0276551 24.654 434 272 12 401 830 46 428 8.14e-33 136
Msa0567250 MtrunA17_Chr4g0020561 64.516 93 33 0 945 1037 1 93 2.99e-32 120
Msa0567250 MtrunA17_Chr2g0297051 24.874 595 349 17 234 825 470 969 1.77e-28 124
Msa0567250 MtrunA17_Chr3g0131151 23.307 768 418 30 135 796 167 869 3.82e-22 103
Msa0567250 MtrunA17_Chr8g0363911 23.548 620 290 20 380 836 340 938 2.34e-19 94.4
Msa0567250 MtrunA17_Chr2g0324791 23.652 575 294 22 441 905 370 909 9.28e-19 92.4
Msa0567250 MtrunA17_Chr8g0374391 31.667 180 94 3 648 827 35 185 3.37e-18 85.1
Msa0567250 MtrunA17_Chr8g0374331 31.667 180 94 3 648 827 42 192 4.33e-18 85.1
Msa0567250 MtrunA17_Chr5g0415271 23.201 556 258 14 429 836 384 918 3.09e-17 87.4
Msa0567250 MtrunA17_Chr4g0052521 32.584 178 91 5 648 825 789 937 5.92e-17 86.7
Msa0567250 MtrunA17_Chr5g0397621 32.768 177 90 4 651 827 696 843 1.12e-16 85.5
Msa0567250 MtrunA17_Chr0c05g0492131 22.991 535 250 16 390 778 362 880 7.96e-16 82.8
Msa0567250 MtrunA17_Chr8g0339181 33.908 174 86 3 654 827 765 909 8.86e-16 82.8
Msa0567250 MtrunA17_Chr3g0078371 22.727 506 257 15 396 778 440 934 9.43e-16 82.8
Msa0567250 MtrunA17_Chr4g0020541 47.761 67 35 0 1 67 1 67 2.76e-14 68.9
Msa0567250 MtrunA17_Chr4g0071991 33.540 161 80 4 644 804 512 645 6.35e-13 73.6
Msa0567250 MtrunA17_Chr2g0329991 28.151 238 121 6 500 697 545 772 1.38e-12 72.4
Msa0567250 MtrunA17_Chr8g0355251 22.704 392 204 13 392 698 388 765 3.68e-12 70.9
Msa0567250 MtrunA17_Chr8g0342811 21.445 443 241 9 488 836 534 963 4.06e-12 70.9
Msa0567250 MtrunA17_Chr2g0297871 26.087 207 115 5 647 853 356 524 7.72e-12 69.7
Msa0567250 MtrunA17_Chr3g0091611 23.496 349 177 10 428 697 401 738 1.83e-11 68.6
Msa0567250 MtrunA17_Chr3g0136331 30.396 227 135 8 251 467 359 572 3.79e-11 67.4
Msa0567250 MtrunA17_Chr7g0244991 23.722 489 250 20 396 779 466 936 4.69e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0567250 AT3G57330.1 72.701 1033 266 7 4 1034 3 1021 0.0 1536
Msa0567250 AT2G41560.1 71.996 1032 278 6 4 1034 3 1024 0.0 1531
Msa0567250 AT3G57330.2 73.265 980 246 7 57 1034 1 966 0.0 1469
Msa0567250 AT2G41560.2 73.283 932 238 6 104 1034 1 922 0.0 1406
Msa0567250 AT2G41560.3 73.283 932 238 6 104 1034 1 922 0.0 1406
Msa0567250 AT2G41560.4 73.283 932 238 6 104 1034 1 922 0.0 1406
Msa0567250 AT4G37640.1 62.377 1018 375 5 1 1014 1 1014 0.0 1273
Msa0567250 AT1G27770.4 62.120 1019 379 5 1 1014 1 1017 0.0 1269
Msa0567250 AT1G27770.1 62.120 1019 379 5 1 1014 1 1017 0.0 1269
Msa0567250 AT2G22950.1 62.316 1019 375 5 1 1014 1 1015 0.0 1266
Msa0567250 AT1G27770.3 63.248 936 339 3 82 1014 21 954 0.0 1198
Msa0567250 AT4G29900.1 50.095 1048 473 16 14 1026 37 1069 0.0 921
Msa0567250 AT4G29900.2 50.095 1048 473 16 14 1026 37 1069 0.0 921
Msa0567250 AT5G57110.1 50.290 1036 465 18 9 1014 32 1047 0.0 912
Msa0567250 AT5G57110.3 50.290 1036 465 18 9 1014 32 1047 0.0 912
Msa0567250 AT5G57110.2 50.290 1036 465 18 9 1014 32 1047 0.0 912
Msa0567250 AT3G21180.1 49.807 1038 464 17 14 1016 51 1066 0.0 909
Msa0567250 AT3G63380.1 45.554 1001 507 17 33 1014 25 1006 0.0 777
Msa0567250 AT3G22910.1 46.097 948 466 14 94 1018 81 1006 0.0 751
Msa0567250 AT1G27770.2 53.994 726 320 8 1 721 1 717 0.0 719
Msa0567250 AT1G27770.2 67.638 309 100 0 706 1014 635 943 3.82e-143 453
Msa0567250 AT5G53010.1 34.262 969 538 24 76 1002 122 1033 2.11e-140 448
Msa0567250 AT1G07670.2 32.139 837 488 19 119 883 31 859 4.48e-97 331
Msa0567250 AT1G07670.1 32.139 837 488 19 119 883 31 859 4.48e-97 331
Msa0567250 AT4G00900.2 30.787 851 476 20 119 874 14 846 3.15e-95 326
Msa0567250 AT4G00900.1 30.787 851 476 20 119 874 14 846 3.15e-95 326
Msa0567250 AT1G07810.1 31.976 835 474 19 128 883 40 859 4.68e-95 326
Msa0567250 AT1G10130.1 29.713 976 558 29 120 992 3 953 8.24e-91 313
Msa0567250 AT5G53010.2 33.283 667 404 16 76 720 122 769 1.28e-89 305
Msa0567250 AT1G80660.4 25.071 702 437 17 132 822 36 659 2.06e-51 196
Msa0567250 AT1G80660.3 25.071 702 437 17 132 822 36 659 2.20e-51 196
Msa0567250 AT1G80660.1 25.071 702 437 17 132 822 36 659 3.19e-51 196
Msa0567250 AT3G60330.4 25.479 730 450 23 116 834 19 665 4.26e-50 192
Msa0567250 AT3G60330.3 25.479 730 450 23 116 834 19 665 4.26e-50 192
Msa0567250 AT3G60330.2 25.342 730 451 23 116 834 19 665 8.90e-50 191
Msa0567250 AT3G60330.1 25.342 730 451 23 116 834 19 665 8.90e-50 191
Msa0567250 AT2G07560.1 25.373 737 437 22 119 829 22 671 3.08e-49 190
Msa0567250 AT1G80660.2 25.714 595 360 16 237 822 9 530 8.53e-49 187
Msa0567250 AT4G30190.1 24.400 750 468 21 119 853 19 684 1.36e-47 185
Msa0567250 AT3G42640.1 25.204 734 443 25 119 829 22 672 1.92e-47 184
Msa0567250 AT1G17260.1 25.000 704 434 17 132 822 39 661 1.01e-46 182
Msa0567250 AT5G57350.4 25.815 736 436 24 119 829 20 670 1.52e-46 181
Msa0567250 AT5G57350.2 25.815 736 436 24 119 829 20 670 1.52e-46 181
Msa0567250 AT5G57350.1 25.815 736 436 24 119 829 20 670 1.52e-46 181
Msa0567250 AT2G24520.3 24.268 717 446 22 132 829 13 651 3.35e-45 177
Msa0567250 AT2G24520.1 24.268 717 446 22 132 829 13 651 3.35e-45 177
Msa0567250 AT2G24520.2 24.268 717 446 22 132 829 76 714 5.03e-45 177
Msa0567250 AT5G62670.1 25.552 724 439 25 115 822 19 658 1.09e-44 176
Msa0567250 AT2G18960.1 23.867 750 472 21 119 853 19 684 2.83e-44 174
Msa0567250 AT4G30190.2 23.694 785 463 22 119 853 19 717 6.46e-44 173
Msa0567250 AT3G47950.1 25.313 719 447 23 115 822 23 662 1.57e-43 172
Msa0567250 AT3G47950.2 25.313 719 447 23 115 822 23 662 1.57e-43 172
Msa0567250 AT2G18960.3 23.923 627 392 16 237 853 69 620 3.08e-42 167
Msa0567250 AT2G18960.2 23.923 627 392 16 237 853 69 620 3.08e-42 167
Msa0567250 AT5G57350.3 24.775 444 267 12 401 829 17 408 5.99e-32 134
Msa0567250 AT2G24520.4 24.324 444 269 14 401 829 17 408 1.01e-31 133
Msa0567250 AT5G23630.1 23.004 739 392 30 135 772 167 829 1.35e-20 99.0
Msa0567250 AT1G59820.1 24.044 549 263 14 429 836 390 925 7.50e-20 96.7
Msa0567250 AT1G63440.1 32.222 180 93 3 648 827 787 937 5.97e-18 90.1
Msa0567250 AT5G44790.1 32.663 199 105 5 629 827 779 948 7.42e-18 89.7
Msa0567250 AT1G68710.2 24.074 486 208 15 441 778 419 891 9.87e-16 83.2
Msa0567250 AT1G68710.1 24.074 486 208 15 441 778 419 891 9.87e-16 83.2
Msa0567250 AT1G68710.3 24.074 486 208 15 441 778 419 891 1.03e-15 83.2
Msa0567250 AT4G30110.1 29.302 215 117 5 621 829 481 666 6.15e-15 80.5
Msa0567250 AT4G30110.2 29.302 215 117 5 621 829 481 666 6.15e-15 80.5
Msa0567250 AT1G17500.2 23.183 509 268 18 504 905 533 1025 1.09e-14 79.7
Msa0567250 AT1G17500.1 23.183 509 268 18 504 905 533 1025 1.09e-14 79.7
Msa0567250 AT4G11730.1 22.176 478 299 14 119 590 23 433 8.31e-14 76.6
Msa0567250 AT1G26130.1 21.802 555 276 16 441 850 419 960 2.14e-13 75.5
Msa0567250 AT4G33520.3 27.152 302 196 6 212 511 370 649 2.34e-13 75.1
Msa0567250 AT4G33520.2 27.152 302 196 6 212 511 370 649 2.57e-13 75.1
Msa0567250 AT1G26130.2 23.577 369 184 10 441 721 419 777 5.45e-12 70.9
Msa0567250 AT1G26130.4 23.577 369 184 10 441 721 419 777 5.45e-12 70.9
Msa0567250 AT1G26130.3 23.577 369 184 10 441 721 419 777 5.45e-12 70.9
Msa0567250 AT3G13900.1 25.101 247 136 5 490 697 539 775 7.70e-12 70.5
Msa0567250 AT1G72700.1 25.532 235 124 5 504 697 544 768 8.07e-12 70.5
Msa0567250 AT1G72700.3 25.532 235 124 5 504 697 544 768 8.07e-12 70.5
Msa0567250 AT1G72700.2 25.532 235 124 5 504 697 544 768 8.07e-12 70.5
Msa0567250 AT1G13210.1 23.161 367 186 10 441 721 418 774 1.19e-11 69.7
Msa0567250 AT3G13900.3 25.101 247 136 5 490 697 539 775 1.20e-11 69.7
Msa0567250 AT3G13900.2 25.101 247 136 5 490 697 539 775 1.25e-11 69.7
Msa0567250 AT5G21930.2 26.991 226 152 5 247 467 346 563 1.33e-11 69.3
Msa0567250 AT5G21930.1 26.991 226 152 5 247 467 346 563 1.33e-11 69.3
Msa0567250 AT5G21930.4 26.991 226 152 5 247 467 346 563 1.39e-11 69.3
Msa0567250 AT3G25610.1 21.505 465 263 12 390 765 368 819 2.00e-11 68.9
Msa0567250 AT2G19110.2 24.880 209 119 4 645 853 518 688 3.54e-11 68.2
Msa0567250 AT2G19110.3 24.880 209 119 4 645 853 518 688 3.54e-11 68.2
Msa0567250 AT2G19110.1 24.880 209 119 4 645 853 518 688 3.54e-11 68.2

Find 248 sgRNAs with CRISPR-Local

Find 537 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGAGTTGCTACTATAAT+TGG 0.178098 4_1:+68600907 Msa0567250:CDS
GGTGAGGTTGTTGCTGTTAC+TGG 0.179759 4_1:+68602193 Msa0567250:CDS
GAATCAGCGTTATTAGAATT+TGG 0.207543 4_1:+68601441 Msa0567250:CDS
ACAAATTAAGCAGGGAATTA+AGG 0.211254 4_1:+68597178 Msa0567250:CDS
ATTAGAATTTGGCTTGCTTT+TGG 0.228885 4_1:+68601452 Msa0567250:CDS
TGCCTCTAAGCTGGCAATTA+TGG 0.243081 4_1:+68604241 Msa0567250:CDS
GCTTTGGGTAAACTTGATTA+TGG 0.248942 4_1:+68602888 Msa0567250:CDS
ATATGGTGGTTAACAAAATA+TGG 0.255441 4_1:+68601250 Msa0567250:CDS
ACCAAACATATTTCTCAAAT+TGG 0.261106 4_1:-68602173 None:intergenic
TCTTTCTGCTTGTGAGACTA+TGG 0.268004 4_1:+68601176 Msa0567250:CDS
ATCCCTACAGTTCATGGATT+TGG 0.269593 4_1:+68600528 Msa0567250:CDS
AAACGGAAAGAACACAATAT+TGG 0.283653 4_1:+68601407 Msa0567250:CDS
TTTAAAGACTTTGTGTGTAT+TGG 0.283695 4_1:+68596784 Msa0567250:five_prime_UTR
AGGAACCGCAACAACTATTA+TGG 0.283792 4_1:-68601073 None:intergenic
CTGTAGTTTCCATAGGTATT+GGG 0.284034 4_1:+68600404 Msa0567250:CDS
GCTGATGGAATTTATATATC+TGG 0.287480 4_1:+68600670 Msa0567250:CDS
TCACAGCTGTTCAGTTGCTT+TGG 0.301104 4_1:+68602872 Msa0567250:CDS
GATTGCAGACAACAAATCTT+TGG 0.310859 4_1:+68600286 Msa0567250:CDS
CTTGACTCTAACCATTCTTA+TGG 0.311129 4_1:+68600375 Msa0567250:CDS
GCTGTAGTTTCCATAGGTAT+TGG 0.313206 4_1:+68600403 Msa0567250:CDS
GAGATTGTAACCTGGATTCT+TGG 0.315197 4_1:-68602032 None:intergenic
AGATCTTTGTTCAGGTCAAC+AGG 0.324420 4_1:+68600566 Msa0567250:CDS
TTAAAGACTTTGTGTGTATT+GGG 0.328388 4_1:+68596785 Msa0567250:five_prime_UTR
AAAGCACTTCATGGTGAGTT+TGG 0.333047 4_1:+68600994 Msa0567250:CDS
CACAGCTGTTCAGTTGCTTT+GGG 0.335129 4_1:+68602873 Msa0567250:CDS
GCTTCGACGGAACGATTCTT+TGG 0.336445 4_1:-68597062 None:intergenic
AACTAAAGTGCAGGATGGTC+AGG 0.351533 4_1:+68600780 Msa0567250:CDS
AAGAGGCTACTCGGAATTAA+TGG 0.352949 4_1:+68603078 Msa0567250:CDS
TATACTCTAATAGCTTTAGT+TGG 0.355705 4_1:+68601804 Msa0567250:CDS
AACCATAATTGCCAGCTTAG+AGG 0.356310 4_1:-68604243 None:intergenic
TGCTTCTATTGTTCGTAGTC+AGG 0.361473 4_1:+68600171 Msa0567250:CDS
ATTGCAGACAACAAATCTTT+GGG 0.365539 4_1:+68600287 Msa0567250:CDS
GAACATTCCTGATGTTTGTA+TGG 0.367131 4_1:+68600338 Msa0567250:CDS
GCTACTATAATTGGTAAAAT+CGG 0.367617 4_1:+68600916 Msa0567250:CDS
TTCATGGTGAGTTTGGTAAT+TGG 0.376896 4_1:+68601001 Msa0567250:CDS
GTTTGTATGGGATGCATTGC+AGG 0.378043 4_1:+68600351 Msa0567250:CDS
ACGAAAACTTGGTCCCTCTA+TGG 0.378654 4_1:-68601976 None:intergenic
TATAAGAACTTGAGTAATAA+TGG 0.381534 4_1:+68600196 Msa0567250:CDS
CTGCTTAATTTGTTCAGCTT+CGG 0.381542 4_1:-68597168 None:intergenic
ACGATATTTGCGCGGTCTGC+AGG 0.382326 4_1:-68601675 None:intergenic
ACAATAGAAGCAATCTCATT+TGG 0.383431 4_1:-68600160 None:intergenic
AAAGGCTGATGTGATTATAA+TGG 0.386067 4_1:+68602608 Msa0567250:CDS
AAAGCCTGGAGCCTTCCATT+AGG 0.387957 4_1:-68601576 None:intergenic
AATCATACTCAGTATATTCT+TGG 0.390495 4_1:+68600471 Msa0567250:CDS
GATATTGTTCATTTGTCTAC+TGG 0.390660 4_1:+68600634 Msa0567250:CDS
GTACTTGTCGGCCTCCCTAA+TGG 0.391381 4_1:+68601561 Msa0567250:CDS
AACGGAAAGAACACAATATT+GGG 0.397399 4_1:+68601408 Msa0567250:CDS
TACTTCTGCTGAAGTAGTTA+AGG 0.397447 4_1:+68601380 Msa0567250:CDS
CAGGCAATCCCTACAGTTCA+TGG 0.398032 4_1:+68600522 Msa0567250:CDS
GCAGCATTGCAATTTATTGA+TGG 0.400623 4_1:+68599973 Msa0567250:CDS
ATGTCTGCCTCATGCAATGC+GGG 0.404847 4_1:-68602235 None:intergenic
AAGCTTGCTCCCCTTCCAAC+AGG 0.407685 4_1:-68602973 None:intergenic
TTCGTCTCTGCATGCATCAC+TGG 0.418268 4_1:+68602747 Msa0567250:CDS
GGACTTGCCATGGGCATAGC+TGG 0.420413 4_1:+68602259 Msa0567250:CDS
ATCGTTCCGTCGAAGCTCTC+AGG 0.424020 4_1:+68597069 Msa0567250:CDS
CCATTGCAGGTTAAATTGAA+TGG 0.427258 4_1:+68600889 Msa0567250:CDS
ATCGATGAATCGAGTTTGTC+AGG 0.429638 4_1:+68600706 Msa0567250:CDS
AGCTTTAAGAACTCTGTGTT+TGG 0.430483 4_1:+68601728 Msa0567250:CDS
AAGCCTGGAGCCTTCCATTA+GGG 0.434154 4_1:-68601575 None:intergenic
AAATGATGCAACGAAGCTAC+TGG 0.437064 4_1:+68601029 Msa0567250:CDS
GATATATAAATTCCATCAGC+TGG 0.438036 4_1:-68600667 None:intergenic
TATTGTCAATGTGGTGAAAT+GGG 0.438154 4_1:+68602647 Msa0567250:CDS
CTAATAACGCTGATTCTGTT+GGG 0.440022 4_1:-68601434 None:intergenic
CAAAGATATAAATGAACCTC+AGG 0.442304 4_1:+68601755 Msa0567250:CDS
CTCTTTACCTTTCAGTTGTG+TGG 0.443185 4_1:-68601286 None:intergenic
TCTAATAACGCTGATTCTGT+TGG 0.443261 4_1:-68601435 None:intergenic
ACAAAACCATGATGGTTATG+AGG 0.443676 4_1:+68604350 Msa0567250:CDS
TCCTGTACGCCCTGGGGTAA+AGG 0.444601 4_1:+68601836 Msa0567250:CDS
GGTTATGAGGCACTTCCATC+TGG 0.445259 4_1:+68604363 Msa0567250:CDS
CTATTGTCAATGTGGTGAAA+TGG 0.448007 4_1:+68602646 Msa0567250:CDS
AAACACCCTTTCCTTCTCTC+TGG 0.449080 4_1:+68600757 Msa0567250:CDS
TCCTTTACCCCAGGGCGTAC+AGG 0.451348 4_1:-68601837 None:intergenic
GTTTGTGCTGTAGTTTCCAT+AGG 0.457275 4_1:+68600397 Msa0567250:CDS
ACCAATTTGAGAAATATGTT+TGG 0.459360 4_1:+68602172 Msa0567250:CDS
AATAGCTTTAGTTGGAATCA+AGG 0.459902 4_1:+68601812 Msa0567250:CDS
CTTTCTGCTTGTGAGACTAT+GGG 0.464616 4_1:+68601177 Msa0567250:CDS
AGAGGATGAGACTCCATTGC+AGG 0.464980 4_1:+68600876 Msa0567250:CDS
ACACCATCATATGTTCCCTT+TGG 0.465764 4_1:-68600445 None:intergenic
TATACCACATTCTTTAGCTA+TGG 0.470261 4_1:-68601934 None:intergenic
GACATTAACAACTAACCATA+TGG 0.473790 4_1:+68601233 Msa0567250:CDS
GACTGAATGGGGAAAATTGA+TGG 0.473870 4_1:+68600834 Msa0567250:CDS
AGTATGTTTGTGCCCGCTGA+AGG 0.474529 4_1:-68596858 None:intergenic
CCAGCACTGTGCCTCTAAGC+TGG 0.474835 4_1:+68604232 Msa0567250:CDS
GTTCAAACTTGTATTGCAGC+TGG 0.475660 4_1:+68601864 Msa0567250:CDS
TCAGAGGCATGTTTGACAGC+TGG 0.476043 4_1:+68604139 Msa0567250:CDS
TTTACAGGTTGCCAAAGAAA+AGG 0.479339 4_1:+68602590 Msa0567250:intron
ATGCACCTTTGCAGAAAGCC+TGG 0.482594 4_1:-68601590 None:intergenic
TTCTTCCGGACGGAATTAAA+CGG 0.482611 4_1:-68601531 None:intergenic
ATCAAGGATCCTGTACGCCC+TGG 0.487895 4_1:+68601828 Msa0567250:CDS
CCATTCAATTTAACCTGCAA+TGG 0.488549 4_1:-68600889 None:intergenic
CGAAGCTGAACAAATTAAGC+AGG 0.488857 4_1:+68597169 Msa0567250:CDS
TCAATATATGATGTAGTAGT+TGG 0.488873 4_1:+68600610 Msa0567250:CDS
AGTGGCAAGCCCAATACCTA+TGG 0.489958 4_1:-68600413 None:intergenic
ACTTGATTATGGACACTCTA+GGG 0.490964 4_1:+68602899 Msa0567250:CDS
ACAGCCAGTGGTAACCCTTC+AGG 0.491780 4_1:-68601093 None:intergenic
CCTCCCTAATGGAAGGCTCC+AGG 0.493292 4_1:+68601572 Msa0567250:CDS
TTGTTCAGGTCAACAGGGAT+GGG 0.494108 4_1:+68600572 Msa0567250:CDS
GCTATCACAAGAGGCGATAG+AGG 0.499863 4_1:+68600120 Msa0567250:CDS
TGTCCAAATCCATGAACTGT+AGG 0.501001 4_1:-68600531 None:intergenic
TGAACAGCTTCCTTTACCCC+AGG 0.502090 4_1:-68601846 None:intergenic
TGCATTTGCACAGATAAGAC+AGG 0.502873 4_1:+68601210 Msa0567250:CDS
TCACAAGAGGCGATAGAGGC+TGG 0.506883 4_1:+68600124 Msa0567250:CDS
TTTGTTCAGGTCAACAGGGA+TGG 0.507268 4_1:+68600571 Msa0567250:CDS
GGTATTGGGCTTGCCACTGA+AGG 0.508470 4_1:+68600418 Msa0567250:CDS
AAGAAGATGTCTGTACTTGT+CGG 0.509713 4_1:+68601549 Msa0567250:CDS
CAAGTACAGACATCTTCTTC+CGG 0.510599 4_1:-68601545 None:intergenic
CATTTCACGACAACAGCTAA+AGG 0.513407 4_1:-68604297 None:intergenic
TCAAGGATCCTGTACGCCCT+GGG 0.513495 4_1:+68601829 Msa0567250:CDS
ATAGTTGTTGCGGTTCCTGA+AGG 0.514585 4_1:+68601078 Msa0567250:CDS
ATGCATCCCATACAAACATC+AGG 0.515566 4_1:-68600345 None:intergenic
TCAGATAATTCACGAAAACT+TGG 0.515712 4_1:-68601987 None:intergenic
AGGCTCCAGGCTTTCTGCAA+AGG 0.515885 4_1:+68601585 Msa0567250:CDS
CGCCACAGTGGCATTTCAAG+TGG 0.517362 4_1:+68604182 Msa0567250:CDS
TTCGGAGCGTTTGTCAAGAT+CGG 0.519427 4_1:-68597150 None:intergenic
CCGTCGAAGCTCTCAGGAGG+TGG 0.520775 4_1:+68597075 Msa0567250:CDS
TGATTCGTCTTCCTATCGAA+TGG 0.521055 4_1:-68597000 None:intergenic
GCCACTGAAGGGTGGCCAAA+GGG 0.522593 4_1:+68600430 Msa0567250:CDS
ACTATGTGGAGGAATATCAT+TGG 0.523394 4_1:+68603006 Msa0567250:CDS
GTCCAAATCCATGAACTGTA+GGG 0.525336 4_1:-68600530 None:intergenic
GTCTTTCTAAGCCCTTCAGC+GGG 0.527481 4_1:+68596846 Msa0567250:five_prime_UTR
TGCCACTGAAGGGTGGCCAA+AGG 0.528551 4_1:+68600429 Msa0567250:CDS
GGAGATCAAGTTCCAGCTGA+TGG 0.529763 4_1:+68600655 Msa0567250:CDS
CCAGCTTAGAGGCACAGTGC+TGG 0.529888 4_1:-68604232 None:intergenic
CGTTGGGAGGTTCAGTAGCA+AGG 0.530489 4_1:-68602930 None:intergenic
TCGTAGAGTGGGGACTAAAA+CGG 0.532469 4_1:-68596888 None:intergenic
ATAACCGTTCGCATGGTCAC+TGG 0.533941 4_1:+68601888 Msa0567250:CDS
TACAGCACAAACCATAAGAA+TGG 0.535285 4_1:-68600386 None:intergenic
TGGCCAAAGGGAACATATGA+TGG 0.535621 4_1:+68600442 Msa0567250:CDS
TCCCTTTGGCCACCCTTCAG+TGG 0.536825 4_1:-68600431 None:intergenic
GATTCGTCTTCCTATCGAAT+GGG 0.536859 4_1:-68596999 None:intergenic
TGATGATGGTGTAGCCATAG+AGG 0.538802 4_1:+68601962 Msa0567250:CDS
GTTGTTGCTGTTACTGGCGA+TGG 0.539279 4_1:+68602199 Msa0567250:CDS
TTAGTTCCAGAGAGAAGGAA+AGG 0.540089 4_1:-68600763 None:intergenic
CTGTTGGTATGAGGACTGAA+TGG 0.541909 4_1:+68600821 Msa0567250:CDS
ATTAGAGTATAACCACTGTC+AGG 0.542060 4_1:-68601792 None:intergenic
TAGTAACAACTGTTGGTATG+AGG 0.543476 4_1:+68600812 Msa0567250:CDS
GGCAGACATTGGACTTGCCA+TGG 0.543514 4_1:+68602249 Msa0567250:CDS
TGTTGGTATGAGGACTGAAT+GGG 0.544743 4_1:+68600822 Msa0567250:CDS
TTACCGCTGTTAGTGACTAC+AGG 0.545080 4_1:+68600503 Msa0567250:CDS
GTGGTGATAGTTGAATTCCT+TGG 0.545400 4_1:+68604201 Msa0567250:CDS
CCACCTCCTGAGAGCTTCGA+CGG 0.551179 4_1:-68597075 None:intergenic
AGGGCTTAGAAAGACGCAAA+GGG 0.551458 4_1:-68596838 None:intergenic
CAATGTGGTGAAATGGGGAC+GGG 0.553280 4_1:+68602653 Msa0567250:CDS
CCGCCGCAGACGGTTTCGTA+TGG 0.555303 4_1:+68597124 Msa0567250:CDS
GCACTTTAGTTCCAGAGAGA+AGG 0.555400 4_1:-68600768 None:intergenic
GGATATCATACCAAGAATCC+AGG 0.556353 4_1:+68602022 Msa0567250:CDS
CAGAGTTCTTAAAGCTTCAG+AGG 0.557031 4_1:-68601721 None:intergenic
TTTGAAATATAGCTTGCGAA+AGG 0.558309 4_1:-68601356 None:intergenic
ACTAAAGTGCAGGATGGTCA+GGG 0.559828 4_1:+68600781 Msa0567250:CDS
GATAAAATTATTGATTGCAA+TGG 0.561159 4_1:+68601636 Msa0567250:CDS
AACTCTAAACGAGGGAGGAG+AGG 0.562433 4_1:+68600858 Msa0567250:CDS
AGGTTTCTCTGTATAACGAT+TGG 0.563422 4_1:-68600311 None:intergenic
GTATGTTTGTGCCCGCTGAA+GGG 0.564592 4_1:-68596857 None:intergenic
GCATTGCATGAGGCAGACAT+TGG 0.565641 4_1:+68602238 Msa0567250:CDS
TGTAACCATAATAGTTGTTG+CGG 0.568605 4_1:+68601068 Msa0567250:CDS
ATTATCTGATGAGCAAATGA+AGG 0.569630 4_1:+68602001 Msa0567250:CDS
GGTTCCTGAAGGGTTACCAC+TGG 0.570414 4_1:+68601089 Msa0567250:CDS
AGCTTGCTCCCCTTCCAACA+GGG 0.570793 4_1:-68602972 None:intergenic
TAGTTCCAGAGAGAAGGAAA+GGG 0.572115 4_1:-68600762 None:intergenic
AAAGGGAACATATGATGGTG+TGG 0.574621 4_1:+68600447 Msa0567250:CDS
AGTATTAAACAAAACCATGA+TGG 0.575155 4_1:+68604342 Msa0567250:CDS
TCTCTCTGGAACTAAAGTGC+AGG 0.576668 4_1:+68600771 Msa0567250:CDS
TTGAGCCGTTTAATTCCGTC+CGG 0.576729 4_1:+68601526 Msa0567250:CDS
AGCTGTTGCAAGGAAGCTGT+CGG 0.577235 4_1:+68600228 Msa0567250:CDS
TTGGGCTTGCCACTGAAGGG+TGG 0.577783 4_1:+68600422 Msa0567250:CDS
TATGCTAGCTCGGGACCAGA+TGG 0.577795 4_1:-68604378 None:intergenic
GCAGACATTGGACTTGCCAT+GGG 0.577852 4_1:+68602250 Msa0567250:CDS
TTTGATGGGAAGAGGCTACT+CGG 0.578493 4_1:+68603069 Msa0567250:CDS
AATAGCTCTCTATGTTCAGA+AGG 0.585442 4_1:+68599951 Msa0567250:CDS
AAATCTCTCTCCCATTCGAT+AGG 0.585576 4_1:+68596989 Msa0567250:five_prime_UTR
CTGAAAACAAACATATCTGA+AGG 0.586170 4_1:+68601321 Msa0567250:CDS
AGCTGGAATAACCGTTCGCA+TGG 0.588081 4_1:+68601881 Msa0567250:CDS
CGTCTTTCTAAGCCCTTCAG+CGG 0.588484 4_1:+68596845 Msa0567250:five_prime_UTR
AAAATGTTAGTAACAACTGT+TGG 0.590839 4_1:+68600805 Msa0567250:CDS
GATGATGGTGTAGCCATAGA+GGG 0.591517 4_1:+68601963 Msa0567250:CDS
TTGTCGGCCTCCCTAATGGA+AGG 0.591794 4_1:+68601565 Msa0567250:CDS
GAAGTGCCTCATAACCATCA+TGG 0.593099 4_1:-68604356 None:intergenic
GAACAGCTTCCTTTACCCCA+GGG 0.593340 4_1:-68601845 None:intergenic
GTCTGCCTCATGCAATGCGG+GGG 0.594575 4_1:-68602233 None:intergenic
AACATTCCTGATGTTTGTAT+GGG 0.597632 4_1:+68600339 Msa0567250:CDS
TAGTTGTTGCGGTTCCTGAA+GGG 0.599571 4_1:+68601079 Msa0567250:CDS
GAAAATACCACACAACTGAA+AGG 0.600517 4_1:+68601279 Msa0567250:CDS
GGAATGTTAGCTTCTCCCTG+AGG 0.601057 4_1:-68601771 None:intergenic
GTATTGGGCTTGCCACTGAA+GGG 0.601088 4_1:+68600419 Msa0567250:CDS
AACTTGATTATGGACACTCT+AGG 0.601954 4_1:+68602898 Msa0567250:CDS
TTCAAAAGTCCATCGTTGGG+AGG 0.603411 4_1:-68602943 None:intergenic
TCAATGTGGTGAAATGGGGA+CGG 0.605114 4_1:+68602652 Msa0567250:CDS
CATGGGCATAGCTGGAACTG+AGG 0.605713 4_1:+68602267 Msa0567250:CDS
CAGTGCTGGCAAATGCTCCA+AGG 0.606438 4_1:-68604218 None:intergenic
CTTGATTATGGACACTCTAG+GGG 0.607314 4_1:+68602900 Msa0567250:CDS
AAGAACTTGAGTAATAATGG+TGG 0.607367 4_1:+68600199 Msa0567250:CDS
CTCAGTTCCAGCTATGCCCA+TGG 0.609723 4_1:-68602266 None:intergenic
TGTCTGCCTCATGCAATGCG+GGG 0.609938 4_1:-68602234 None:intergenic
TGTGGTATACTTACTGATGA+TGG 0.611651 4_1:+68601948 Msa0567250:CDS
AAGGGAACATATGATGGTGT+GGG 0.615176 4_1:+68600448 Msa0567250:CDS
GCTTTATCACTAAAACTATG+TGG 0.616386 4_1:+68602992 Msa0567250:CDS
GAAAAGATAAACATATTCAG+AGG 0.618386 4_1:+68604123 Msa0567250:CDS
TGAATACAAGCTATCACAAG+AGG 0.619601 4_1:+68600111 Msa0567250:CDS
ATAGGAAGACGAATCAGCAA+TGG 0.624142 4_1:+68597007 Msa0567250:exon
ATCACCAGTGACCATGCGAA+CGG 0.626402 4_1:-68601892 None:intergenic
TACAGACATCTTCTTCCGGA+CGG 0.627058 4_1:-68601541 None:intergenic
AACATCAGGAATGTTCTCGA+AGG 0.627494 4_1:-68600331 None:intergenic
AAGACGAATCAGCAATGGAG+TGG 0.630245 4_1:+68597012 Msa0567250:exon
AATGTCTGCCTCATGCAATG+CGG 0.632627 4_1:-68602236 None:intergenic
AAGGGCTTAGAAAGACGCAA+AGG 0.633956 4_1:-68596839 None:intergenic
AAAGATATAAATGAACCTCA+GGG 0.634481 4_1:+68601756 Msa0567250:CDS
CTTATGTTTGTCGAGCGGCA+AGG 0.635144 4_1:-68602143 None:intergenic
GTTGGGAGGTTCAGTAGCAA+GGG 0.635194 4_1:-68602929 None:intergenic
AATGGAGTGGAATCTGCTCA+AGG 0.637853 4_1:+68597025 Msa0567250:exon
AGACTGAGTGTCACAGCCAG+TGG 0.639256 4_1:-68601105 None:intergenic
ATCGATGTTCAAAATTTGCG+CGG 0.639971 4_1:+68596921 Msa0567250:five_prime_UTR
GATCTTTGTTCAGGTCAACA+GGG 0.639989 4_1:+68600567 Msa0567250:CDS
GCTACTGAACCTCCCAACGA+TGG 0.640336 4_1:+68602934 Msa0567250:CDS
AAAGCCATAGCTAAAGAATG+TGG 0.644216 4_1:+68601930 Msa0567250:CDS
TTTCGTATATTCGTAGAGTG+GGG 0.644573 4_1:-68596898 None:intergenic
TTTGAGAAATATGTTTGGTG+AGG 0.646587 4_1:+68602177 Msa0567250:CDS
ATTAACAACTAACCATATGG+TGG 0.651424 4_1:+68601236 Msa0567250:CDS
GCTTGCTCCCCTTCCAACAG+GGG 0.653272 4_1:-68602971 None:intergenic
GAAGCTGAACAAATTAAGCA+GGG 0.656666 4_1:+68597170 Msa0567250:CDS
CTTGCTCCCCTTCCAACAGG+GGG 0.657512 4_1:-68602970 None:intergenic
CCATACGAAACCGTCTGCGG+CGG 0.658203 4_1:-68597124 None:intergenic
GTTCCGTCGAAGCTCTCAGG+AGG 0.658689 4_1:+68597072 Msa0567250:CDS
GTGGAGTTGAAGCTGTTGCA+AGG 0.662176 4_1:+68600218 Msa0567250:CDS
GCATTTGCACAGATAAGACA+GGG 0.662575 4_1:+68601211 Msa0567250:CDS
GGCTTAGAAAGACGCAAAGG+GGG 0.664278 4_1:-68596836 None:intergenic
ACTAACTTATGTTTGTCGAG+CGG 0.664606 4_1:-68602148 None:intergenic
CAACCATACGAAACCGTCTG+CGG 0.665343 4_1:-68597127 None:intergenic
CTTCGCGACTATTGTCAATG+TGG 0.665673 4_1:+68602638 Msa0567250:CDS
TTGCAGACAACAAATCTTTG+GGG 0.665708 4_1:+68600288 Msa0567250:CDS
TATTACCTGGCAAAATACAA+AGG 0.666650 4_1:-68603142 None:intergenic
CTGTCGGTTTCTATAGACGA+AGG 0.672081 4_1:+68600244 Msa0567250:CDS
TTGATGGAAACTCTAAACGA+GGG 0.673009 4_1:+68600850 Msa0567250:CDS
CCTGGAGCCTTCCATTAGGG+AGG 0.675174 4_1:-68601572 None:intergenic
TTATCACTAAAACTATGTGG+AGG 0.677920 4_1:+68602995 Msa0567250:CDS
CAAGGATCCTGTACGCCCTG+GGG 0.680616 4_1:+68601830 Msa0567250:CDS
GGGCTTAGAAAGACGCAAAG+GGG 0.680685 4_1:-68596837 None:intergenic
CTAAAGTGCAGGATGGTCAG+GGG 0.681358 4_1:+68600782 Msa0567250:CDS
ATTGATGGAAACTCTAAACG+AGG 0.684504 4_1:+68600849 Msa0567250:CDS
TCTGGAACTAAAGTGCAGGA+TGG 0.684972 4_1:+68600775 Msa0567250:CDS
ATGGAAACTCTAAACGAGGG+AGG 0.685516 4_1:+68600853 Msa0567250:CDS
ATTGTCAATGTGGTGAAATG+GGG 0.686248 4_1:+68602648 Msa0567250:CDS
CACCACTTGAAATGCCACTG+TGG 0.686346 4_1:-68604184 None:intergenic
GTATCTTATAAGCTTTACTG+CGG 0.688450 4_1:-68601497 None:intergenic
GAAGCTAACATTCCTGACAG+TGG 0.689721 4_1:+68601780 Msa0567250:CDS
AGCAACTGAACAGCTGTGAG+TGG 0.693349 4_1:-68602868 None:intergenic
TTGCCTGTAGTCACTAACAG+CGG 0.730012 4_1:-68600506 None:intergenic
CATCTGAGACGATATTTGCG+CGG 0.753777 4_1:-68601683 None:intergenic
GTTGGTATGAGGACTGAATG+GGG 0.754776 4_1:+68600823 Msa0567250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTTTAAAAAAATAT+TGG + chr4_1:68598405-68598424 Msa0567250:intron 0.0%
!!! ATATTAAAAGACTATTATTT+TGG + chr4_1:68597980-68597999 Msa0567250:intron 10.0%
!!! CTTTTTATTTAATTCAAAAA+AGG - chr4_1:68598478-68598497 None:intergenic 10.0%
!!! CTTTTTTGAATTAAATAAAA+AGG + chr4_1:68598476-68598495 Msa0567250:intron 10.0%
!!! GATAACTAATAATTTATTTT+TGG + chr4_1:68602557-68602576 Msa0567250:intron 10.0%
!!! ATAATTTGTCGTAATATTAT+TGG + chr4_1:68597335-68597354 Msa0567250:intron 15.0%
!!! TAATTTGTCGTAATATTATT+GGG + chr4_1:68597336-68597355 Msa0567250:intron 15.0%
!! TTCTTCAAATTCTTAATTAA+TGG + chr4_1:68597645-68597664 Msa0567250:intron 15.0%
!! TATATCATAAATTATAACAG+CGG - chr4_1:68598189-68598208 None:intergenic 15.0%
!!! ATAGTATAACCTTATTTTAT+AGG - chr4_1:68599854-68599873 None:intergenic 15.0%
!! TTTGTAGTATAAGAATAAAA+TGG + chr4_1:68603223-68603242 Msa0567250:intron 15.0%
!! GTCTAATAAAATTAAAAAAC+TGG + chr4_1:68603260-68603279 Msa0567250:intron 15.0%
!! AATAAAATTAAAAAACTGGA+TGG + chr4_1:68603264-68603283 Msa0567250:intron 15.0%
!! AAGGTTAAAATAAACAAAAT+GGG - chr4_1:68603293-68603312 None:intergenic 15.0%
!! AAGTCAAAAATAAATTACAA+TGG - chr4_1:68603429-68603448 None:intergenic 15.0%
!! GAAATGAAATGAAAAAGATA+AGG - chr4_1:68597218-68597237 None:intergenic 20.0%
!!! ACATTCACTTTTTTTTTGAA+GGG - chr4_1:68597788-68597807 None:intergenic 20.0%
!!! AACATTCACTTTTTTTTTGA+AGG - chr4_1:68597789-68597808 None:intergenic 20.0%
!! GTTATATTCATAATCTTTGT+AGG - chr4_1:68597866-68597885 None:intergenic 20.0%
!! TTATGAATATAACAGATTAC+TGG + chr4_1:68597873-68597892 Msa0567250:intron 20.0%
!!! TTTGGTTATATTAGTTTTCA+CGG + chr4_1:68597998-68598017 Msa0567250:intron 20.0%
!! TTGCAATTAACAGAAAATTT+GGG - chr4_1:68598076-68598095 None:intergenic 20.0%
!! ATTGCAATTAACAGAAAATT+TGG - chr4_1:68598077-68598096 None:intergenic 20.0%
!!! AATAAAAAGGCATATAAGAA+AGG + chr4_1:68598489-68598508 Msa0567250:intron 20.0%
!! CTGATATAACAAATAAACTT+AGG + chr4_1:68598994-68599013 Msa0567250:intron 20.0%
!!! ACAAATATAAGTTGATTTTG+AGG + chr4_1:68599164-68599183 Msa0567250:intron 20.0%
!! ATTATTGTAGTAATGTAGTA+TGG + chr4_1:68599578-68599597 Msa0567250:intron 20.0%
!! TATAAGAACTTGAGTAATAA+TGG + chr4_1:68600196-68600215 Msa0567250:CDS 20.0%
!! GAAAAAATTAATGAATGACA+TGG + chr4_1:68601140-68601159 Msa0567250:CDS 20.0%
!!! GATAAAATTATTGATTGCAA+TGG + chr4_1:68601636-68601655 Msa0567250:CDS 20.0%
!!! ATGTAATTTGTGCTTAAATT+TGG + chr4_1:68602101-68602120 Msa0567250:intron 20.0%
!! CAAGGTTAAAATAAACAAAA+TGG - chr4_1:68603294-68603313 None:intergenic 20.0%
!!! AATATAGAATTTTTGGATCT+TGG + chr4_1:68603479-68603498 Msa0567250:intron 20.0%
!!! TACTTTTTGAATCGAAATTA+GGG - chr4_1:68603674-68603693 None:intergenic 20.0%
!!! TTACTTTTTGAATCGAAATT+AGG - chr4_1:68603675-68603694 None:intergenic 20.0%
!!! CTAAAAAGCGAATAAAATTT+TGG - chr4_1:68603817-68603836 None:intergenic 20.0%
!!! TCTGTATTGGTAATTTTATA+GGG - chr4_1:68603840-68603859 None:intergenic 20.0%
!!! TTCTGTATTGGTAATTTTAT+AGG - chr4_1:68603841-68603860 None:intergenic 20.0%
!!! TACTATTTTTTCTTTCAACT+GGG - chr4_1:68604326-68604345 None:intergenic 20.0%
!!! ATACTATTTTTTCTTTCAAC+TGG - chr4_1:68604327-68604346 None:intergenic 20.0%
! TTTAAAGACTTTGTGTGTAT+TGG + chr4_1:68596784-68596803 Msa0567250:five_prime_UTR 25.0%
! TTAAAGACTTTGTGTGTATT+GGG + chr4_1:68596785-68596804 Msa0567250:five_prime_UTR 25.0%
! GTACAAAATTAGCTAGAAAA+AGG + chr4_1:68597307-68597326 Msa0567250:intron 25.0%
! ATGAAAGAGACAAATAGAAA+GGG + chr4_1:68597418-68597437 Msa0567250:intron 25.0%
! AAAGGGAAAACAAATCAAAA+GGG + chr4_1:68597435-68597454 Msa0567250:intron 25.0%
! ATTATGATGCTTATTCATCA+AGG - chr4_1:68597924-68597943 None:intergenic 25.0%
! TGCAATTAACAGAAAATTTG+GGG - chr4_1:68598075-68598094 None:intergenic 25.0%
! GACCATTAATTCTTTAAACA+CGG + chr4_1:68598639-68598658 Msa0567250:intron 25.0%
! ATGTAAAGTGATTTCAACAA+TGG + chr4_1:68598714-68598733 Msa0567250:intron 25.0%
! GCAAATTTAATATTTCCTTG+TGG + chr4_1:68598752-68598771 Msa0567250:intron 25.0%
! ACTTAAAATGCATACAAAGA+AGG + chr4_1:68598907-68598926 Msa0567250:intron 25.0%
!! TGTCAATCATATTTGAGTTT+CGG + chr4_1:68599288-68599307 Msa0567250:intron 25.0%
!! TTCGGGAAATTTTCAAATAT+CGG + chr4_1:68599306-68599325 Msa0567250:intron 25.0%
! TAGTAGAATACTTTGATATG+TGG - chr4_1:68599343-68599362 None:intergenic 25.0%
!! ACTGAAGTCTATTTTATAAC+AGG + chr4_1:68599384-68599403 Msa0567250:intron 25.0%
!!! TCAATATGCCATTTTTTTCT+GGG - chr4_1:68599439-68599458 None:intergenic 25.0%
! TGTGACTTACCTATAAAATA+AGG + chr4_1:68599842-68599861 Msa0567250:intron 25.0%
! TAAAGTTAATATAGCCAAAG+TGG - chr4_1:68599907-68599926 None:intergenic 25.0%
!! TTAACTTTATTTACTCCATC+AGG + chr4_1:68599918-68599937 Msa0567250:intron 25.0%
! AATCATACTCAGTATATTCT+TGG + chr4_1:68600471-68600490 Msa0567250:CDS 25.0%
! GAAAAAAAAGATCTTTGTTC+AGG + chr4_1:68600558-68600577 Msa0567250:CDS 25.0%
! TCAATATATGATGTAGTAGT+TGG + chr4_1:68600610-68600629 Msa0567250:CDS 25.0%
!!! TGTTTTTCGGTTATAAATAC+AGG - chr4_1:68600742-68600761 None:intergenic 25.0%
! AAAATGTTAGTAACAACTGT+TGG + chr4_1:68600805-68600824 Msa0567250:CDS 25.0%
! GCTACTATAATTGGTAAAAT+CGG + chr4_1:68600916-68600935 Msa0567250:CDS 25.0%
!! ATATTTTGTTAACCACCATA+TGG - chr4_1:68601251-68601270 None:intergenic 25.0%
! ATATGGTGGTTAACAAAATA+TGG + chr4_1:68601250-68601269 Msa0567250:CDS 25.0%
! GAAGTAGTTAAGGATAAAAA+CGG + chr4_1:68601390-68601409 Msa0567250:CDS 25.0%
! AAAGATATAAATGAACCTCA+GGG + chr4_1:68601756-68601775 Msa0567250:CDS 25.0%
!!! TATACTCTAATAGCTTTAGT+TGG + chr4_1:68601804-68601823 Msa0567250:CDS 25.0%
! TTAAATTTGGTATCAGGTAA+TGG + chr4_1:68602114-68602133 Msa0567250:intron 25.0%
! ACCAATTTGAGAAATATGTT+TGG + chr4_1:68602172-68602191 Msa0567250:CDS 25.0%
! ACCAAACATATTTCTCAAAT+TGG - chr4_1:68602176-68602195 None:intergenic 25.0%
!! GTTCATTTGAAATGTTTCAA+AGG + chr4_1:68602800-68602819 Msa0567250:intron 25.0%
! ATATATTCTTCCTTACTTTC+AGG + chr4_1:68602838-68602857 Msa0567250:intron 25.0%
! TATATTCTTCCTTACTTTCA+GGG + chr4_1:68602839-68602858 Msa0567250:intron 25.0%
!!! TTGCGATTCTAAATTTTGAT+GGG + chr4_1:68603055-68603074 Msa0567250:CDS 25.0%
!!! TTAGCTAAATCTCTTTTTCA+GGG + chr4_1:68603190-68603209 Msa0567250:intron 25.0%
! AATTCTATATTTGCAAGGAT+GGG - chr4_1:68603470-68603489 None:intergenic 25.0%
! AAATTCTATATTTGCAAGGA+TGG - chr4_1:68603471-68603490 None:intergenic 25.0%
! CCAAAAATTCTATATTTGCA+AGG - chr4_1:68603475-68603494 None:intergenic 25.0%
!! CCTTGCAAATATAGAATTTT+TGG + chr4_1:68603472-68603491 Msa0567250:intron 25.0%
!!! CTTGGTCTCTAAATTTTTTT+AGG + chr4_1:68603497-68603516 Msa0567250:intron 25.0%
!! TTTAGGCTTAATTACACTTT+TGG + chr4_1:68603514-68603533 Msa0567250:intron 25.0%
!!! AAAGAGTTGTTTTTTTTAGG+GGG - chr4_1:68603743-68603762 None:intergenic 25.0%
!!! GAAAGAGTTGTTTTTTTTAG+GGG - chr4_1:68603742-68603761 None:intergenic 25.0%
!!! GGAAAGAGTTGTTTTTTTTA+GGG - chr4_1:68603741-68603760 None:intergenic 25.0%
!!! TGGAAAGAGTTGTTTTTTTT+AGG - chr4_1:68603740-68603759 None:intergenic 25.0%
! TGCAACAAAAAGTAAACTTA+GGG - chr4_1:68603601-68603620 None:intergenic 25.0%
! TTGCAACAAAAAGTAAACTT+AGG - chr4_1:68603602-68603621 None:intergenic 25.0%
!! ACTTTTTGAATCGAAATTAG+GGG - chr4_1:68603673-68603692 None:intergenic 25.0%
! TCGATTCAAAAAGTAAACTT+AGG + chr4_1:68603679-68603698 Msa0567250:intron 25.0%
! CGATTCAAAAAGTAAACTTA+GGG + chr4_1:68603680-68603699 Msa0567250:intron 25.0%
! GATTCAAAAAGTAAACTTAG+GGG + chr4_1:68603681-68603700 Msa0567250:intron 25.0%
! ATTCAAAAAGTAAACTTAGG+GGG + chr4_1:68603682-68603701 Msa0567250:intron 25.0%
!!! TGGAAAGAGTTGTTTTTTTT+AGG + chr4_1:68603740-68603759 Msa0567250:intron 25.0%
!!! GGAAAGAGTTGTTTTTTTTA+GGG + chr4_1:68603741-68603760 Msa0567250:intron 25.0%
!!! GAAAGAGTTGTTTTTTTTAG+GGG + chr4_1:68603742-68603761 Msa0567250:intron 25.0%
!!! AAAGAGTTGTTTTTTTTAGG+GGG + chr4_1:68603743-68603762 Msa0567250:intron 25.0%
!!! TTTTGGCTTAATTACACTTT+TGG - chr4_1:68603800-68603819 None:intergenic 25.0%
!! AATACAGAAATTGTGCTTTT+GGG + chr4_1:68603852-68603871 Msa0567250:intron 25.0%
!! GTATTTCTGTTCAAAATTGA+TGG - chr4_1:68603958-68603977 None:intergenic 25.0%
! GAAAAGATAAACATATTCAG+AGG + chr4_1:68604123-68604142 Msa0567250:CDS 25.0%
! AGTATTAAACAAAACCATGA+TGG + chr4_1:68604342-68604361 Msa0567250:CDS 25.0%
! TTTTCGTATATTCGTAGAGT+GGG - chr4_1:68596902-68596921 None:intergenic 30.0%
! ATTTTCGTATATTCGTAGAG+TGG - chr4_1:68596903-68596922 None:intergenic 30.0%
ACAAATTAAGCAGGGAATTA+AGG + chr4_1:68597178-68597197 Msa0567250:CDS 30.0%
AAAAAGATAAGGAGAAGAGA+AGG - chr4_1:68597207-68597226 None:intergenic 30.0%
! TTTTAAACGCTACAGGAATT+AGG + chr4_1:68597246-68597265 Msa0567250:intron 30.0%
TCTATTTGTCTCTTTCATGT+TGG - chr4_1:68597416-68597435 None:intergenic 30.0%
CATGAAAGAGACAAATAGAA+AGG + chr4_1:68597417-68597436 Msa0567250:intron 30.0%
GAAAGGGAAAACAAATCAAA+AGG + chr4_1:68597434-68597453 Msa0567250:intron 30.0%
AAGGGAAAACAAATCAAAAG+GGG + chr4_1:68597436-68597455 Msa0567250:intron 30.0%
GCAATTAACAGAAAATTTGG+GGG - chr4_1:68598074-68598093 None:intergenic 30.0%
ATCATAAATTATAACAGCGG+AGG - chr4_1:68598186-68598205 None:intergenic 30.0%
TTTGTGTTCAACCTAGTAAT+AGG + chr4_1:68598245-68598264 Msa0567250:intron 30.0%
! AATGTTCGCATATTTTGCTA+GGG - chr4_1:68598300-68598319 None:intergenic 30.0%
!!! AACTTTTTTGACAACACTTG+TGG - chr4_1:68598434-68598453 None:intergenic 30.0%
! AAAAAGGCATATAAGAAAGG+TGG + chr4_1:68598492-68598511 Msa0567250:intron 30.0%
CCATGTTAACTTTCTTGATA+CGG + chr4_1:68598528-68598547 Msa0567250:intron 30.0%
!!! AACAACCATTGACTTCTTTT+TGG + chr4_1:68598607-68598626 Msa0567250:intron 30.0%
AGCCGTGTTTAAAGAATTAA+TGG - chr4_1:68598644-68598663 None:intergenic 30.0%
TAAAGTGATTTCAACAATGG+TGG + chr4_1:68598717-68598736 Msa0567250:intron 30.0%
!! AATTTTCGGGAGAAAAATGT+GGG - chr4_1:68598798-68598817 None:intergenic 30.0%
CTTTCAAAAATATCAGCACT+TGG - chr4_1:68598973-68598992 None:intergenic 30.0%
TGTCTGTTGAACAAAAACAA+TGG - chr4_1:68599205-68599224 None:intergenic 30.0%
! GTCAATCATATTTGAGTTTC+GGG + chr4_1:68599289-68599308 Msa0567250:intron 30.0%
! AATTTTCAAATATCGGTCCA+TGG + chr4_1:68599313-68599332 Msa0567250:intron 30.0%
TAGACTTCAGTAGAAGTTTA+TGG - chr4_1:68599375-68599394 None:intergenic 30.0%
!!! GTCAATATGCCATTTTTTTC+TGG - chr4_1:68599440-68599459 None:intergenic 30.0%
! TGCACTTTGAATTGATTCAA+AGG + chr4_1:68599492-68599511 Msa0567250:intron 30.0%
TGCTTAGAAACTTACTTTAG+AGG + chr4_1:68599548-68599567 Msa0567250:intron 30.0%
ACACATGCATATCAAATCAT+AGG - chr4_1:68599688-68599707 None:intergenic 30.0%
!!! TCAATTTTGGCATCGATTTT+AGG + chr4_1:68599783-68599802 Msa0567250:intron 30.0%
AAATTTACCGTGACAGTATA+AGG + chr4_1:68599809-68599828 Msa0567250:intron 30.0%
AATTTACCGTGACAGTATAA+GGG + chr4_1:68599810-68599829 Msa0567250:intron 30.0%
!! ACTGTTTTTCTTAGTTCATC+TGG + chr4_1:68600062-68600081 Msa0567250:intron 30.0%
ACAATAGAAGCAATCTCATT+TGG - chr4_1:68600163-68600182 None:intergenic 30.0%
AAGAACTTGAGTAATAATGG+TGG + chr4_1:68600199-68600218 Msa0567250:CDS 30.0%
ATTGCAGACAACAAATCTTT+GGG + chr4_1:68600287-68600306 Msa0567250:CDS 30.0%
AACATTCCTGATGTTTGTAT+GGG + chr4_1:68600339-68600358 Msa0567250:CDS 30.0%
GATATTGTTCATTTGTCTAC+TGG + chr4_1:68600634-68600653 Msa0567250:CDS 30.0%
GATATATAAATTCCATCAGC+TGG - chr4_1:68600670-68600689 None:intergenic 30.0%
GCTGATGGAATTTATATATC+TGG + chr4_1:68600670-68600689 Msa0567250:CDS 30.0%
AATGGAGTTGCTACTATAAT+TGG + chr4_1:68600907-68600926 Msa0567250:CDS 30.0%
! TTTTGCCATTGTGACATTTT+TGG + chr4_1:68600945-68600964 Msa0567250:CDS 30.0%
CAATACCAAAAATGTCACAA+TGG - chr4_1:68600953-68600972 None:intergenic 30.0%
TGTAACCATAATAGTTGTTG+CGG + chr4_1:68601068-68601087 Msa0567250:CDS 30.0%
GACATTAACAACTAACCATA+TGG + chr4_1:68601233-68601252 Msa0567250:CDS 30.0%
ATTAACAACTAACCATATGG+TGG + chr4_1:68601236-68601255 Msa0567250:CDS 30.0%
CTGAAAACAAACATATCTGA+AGG + chr4_1:68601321-68601340 Msa0567250:CDS 30.0%
! TTTGAAATATAGCTTGCGAA+AGG - chr4_1:68601359-68601378 None:intergenic 30.0%
AAACGGAAAGAACACAATAT+TGG + chr4_1:68601407-68601426 Msa0567250:CDS 30.0%
AACGGAAAGAACACAATATT+GGG + chr4_1:68601408-68601427 Msa0567250:CDS 30.0%
GAATCAGCGTTATTAGAATT+TGG + chr4_1:68601441-68601460 Msa0567250:CDS 30.0%
!!! ATTAGAATTTGGCTTGCTTT+TGG + chr4_1:68601452-68601471 Msa0567250:CDS 30.0%
!!! TTAGAATTTGGCTTGCTTTT+GGG + chr4_1:68601453-68601472 Msa0567250:CDS 30.0%
GTATCTTATAAGCTTTACTG+CGG - chr4_1:68601500-68601519 None:intergenic 30.0%
CAAAGATATAAATGAACCTC+AGG + chr4_1:68601755-68601774 Msa0567250:CDS 30.0%
!! AATAGCTTTAGTTGGAATCA+AGG + chr4_1:68601812-68601831 Msa0567250:CDS 30.0%
TATACCACATTCTTTAGCTA+TGG - chr4_1:68601937-68601956 None:intergenic 30.0%
TCAGATAATTCACGAAAACT+TGG - chr4_1:68601990-68602009 None:intergenic 30.0%
ATTATCTGATGAGCAAATGA+AGG + chr4_1:68602001-68602020 Msa0567250:CDS 30.0%
TATACAATGAGATTGTAACC+TGG - chr4_1:68602043-68602062 None:intergenic 30.0%
TTGTGCTTAAATTTGGTATC+AGG + chr4_1:68602108-68602127 Msa0567250:intron 30.0%
! TTTGAGAAATATGTTTGGTG+AGG + chr4_1:68602177-68602196 Msa0567250:CDS 30.0%
GTAAAGTACAAACATAATGC+AGG - chr4_1:68602365-68602384 None:intergenic 30.0%
TGTACTTTACAGACATTAGA+TGG + chr4_1:68602375-68602394 Msa0567250:intron 30.0%
ATCTCTTGTGTCAAGAAAAA+TGG - chr4_1:68602443-68602462 None:intergenic 30.0%
TCACTTATCAATAGCATCTA+AGG - chr4_1:68602539-68602558 None:intergenic 30.0%
AAAGGCTGATGTGATTATAA+TGG + chr4_1:68602608-68602627 Msa0567250:CDS 30.0%
TATTGTCAATGTGGTGAAAT+GGG + chr4_1:68602647-68602666 Msa0567250:CDS 30.0%
GAAATGTTTCAAAGGAACAT+AGG + chr4_1:68602808-68602827 Msa0567250:intron 30.0%
GCTTTATCACTAAAACTATG+TGG + chr4_1:68602992-68603011 Msa0567250:CDS 30.0%
TTATCACTAAAACTATGTGG+AGG + chr4_1:68602995-68603014 Msa0567250:CDS 30.0%
! CTTGCGATTCTAAATTTTGA+TGG + chr4_1:68603054-68603073 Msa0567250:CDS 30.0%
!! TTCTAAATTTTGATGGGAAG+AGG + chr4_1:68603061-68603080 Msa0567250:CDS 30.0%
TATTACCTGGCAAAATACAA+AGG - chr4_1:68603145-68603164 None:intergenic 30.0%
CATACTATGACATTATTACC+TGG - chr4_1:68603158-68603177 None:intergenic 30.0%
CTGAAAAAGAGATTTAGCTA+AGG - chr4_1:68603191-68603210 None:intergenic 30.0%
! CTTAGCTAAATCTCTTTTTC+AGG + chr4_1:68603189-68603208 Msa0567250:intron 30.0%
TACGGTTATGTTCAAATTGA+CGG - chr4_1:68603319-68603338 None:intergenic 30.0%
GATGAACTGCAAATACTAAT+TGG - chr4_1:68603386-68603405 None:intergenic 30.0%
! TCACAACTTTGAGAAACTTA+GGG - chr4_1:68603772-68603791 None:intergenic 30.0%
! ATCACAACTTTGAGAAACTT+AGG - chr4_1:68603771-68603790 None:intergenic 30.0%
! GTTTCTCAAAGTTGTGATTT+TGG + chr4_1:68603545-68603564 Msa0567250:intron 30.0%
! CTTTTTGAATCGAAATTAGG+GGG - chr4_1:68603672-68603691 None:intergenic 30.0%
! GTTTCTCAAAGTTGTGATTT+TGG - chr4_1:68603545-68603564 None:intergenic 30.0%
! ATCACAACTTTGAGAAACTT+AGG + chr4_1:68603771-68603790 Msa0567250:intron 30.0%
! TCACAACTTTGAGAAACTTA+GGG + chr4_1:68603772-68603791 Msa0567250:intron 30.0%
! CAAAAGCACAATTTCTGTAT+TGG - chr4_1:68603853-68603872 None:intergenic 30.0%
! CAATACAGAAATTGTGCTTT+TGG + chr4_1:68603851-68603870 Msa0567250:intron 30.0%
! TGTTCAAAATTGATGGACAT+AGG - chr4_1:68603951-68603970 None:intergenic 30.0%
TTTCGTATATTCGTAGAGTG+GGG - chr4_1:68596901-68596920 None:intergenic 35.0%
ATCGATGTTCAAAATTTGCG+CGG + chr4_1:68596921-68596940 Msa0567250:five_prime_UTR 35.0%
!! CTGCTTAATTTGTTCAGCTT+CGG - chr4_1:68597171-68597190 None:intergenic 35.0%
GAAGCTGAACAAATTAAGCA+GGG + chr4_1:68597170-68597189 Msa0567250:CDS 35.0%
! TCCATCATTTTAAACGCTAC+AGG + chr4_1:68597239-68597258 Msa0567250:intron 35.0%
! TCCTGTAGCGTTTAAAATGA+TGG - chr4_1:68597243-68597262 None:intergenic 35.0%
AGGGAAAACAAATCAAAAGG+GGG + chr4_1:68597437-68597456 Msa0567250:intron 35.0%
!!! TATCCGTTAGTTTTCTTCCA+TGG + chr4_1:68597554-68597573 Msa0567250:intron 35.0%
TGTCCATGGAAGAAAACTAA+CGG - chr4_1:68597560-68597579 None:intergenic 35.0%
CATTGTAGCAGTGTAAAATC+AGG - chr4_1:68597603-68597622 None:intergenic 35.0%
GGTATGGATGTAAATTCGAT+TGG - chr4_1:68597816-68597835 None:intergenic 35.0%
TTACATCCATACCCCAAAAT+TGG + chr4_1:68597823-68597842 Msa0567250:intron 35.0%
TACATCCATACCCCAAAATT+GGG + chr4_1:68597824-68597843 Msa0567250:intron 35.0%
ATAATCTTTGTAGGCCATCA+CGG - chr4_1:68597857-68597876 None:intergenic 35.0%
TCAACCTAGTAATAGGAGAA+AGG + chr4_1:68598252-68598271 Msa0567250:intron 35.0%
! ATTTTGCTAGGGAAATTTCG+AGG - chr4_1:68598289-68598308 None:intergenic 35.0%
! CAATGTTCGCATATTTTGCT+AGG - chr4_1:68598301-68598320 None:intergenic 35.0%
TATGCGAACATTGTTTGACA+AGG + chr4_1:68598308-68598327 Msa0567250:intron 35.0%
ATAGACAATGTGACAACTAG+TGG + chr4_1:68598345-68598364 Msa0567250:intron 35.0%
TAGACAATGTGACAACTAGT+GGG + chr4_1:68598346-68598365 Msa0567250:intron 35.0%
GGGATATAAACAAGAGAAAG+TGG + chr4_1:68598366-68598385 Msa0567250:intron 35.0%
CCGTATCAAGAAAGTTAACA+TGG - chr4_1:68598531-68598550 None:intergenic 35.0%
GTTAACTTTCTTGATACGGA+AGG + chr4_1:68598532-68598551 Msa0567250:intron 35.0%
TCGTAAGAGACTGCAATAAT+AGG - chr4_1:68598568-68598587 None:intergenic 35.0%
CAAGACCAAAAAGAAGTCAA+TGG - chr4_1:68598615-68598634 None:intergenic 35.0%
! TCCTTGTGGATGATTTTACT+TGG + chr4_1:68598766-68598785 Msa0567250:intron 35.0%
ACCAAGTAAAATCATCCACA+AGG - chr4_1:68598770-68598789 None:intergenic 35.0%
!! CAATTTTCGGGAGAAAAATG+TGG - chr4_1:68598799-68598818 None:intergenic 35.0%
! TTTTCTCCCGAAAATTGACT+AGG + chr4_1:68598802-68598821 Msa0567250:intron 35.0%
TCGAATACTACCTATTAAGG+CGG - chr4_1:68599036-68599055 None:intergenic 35.0%
CCATCGAATACTACCTATTA+AGG - chr4_1:68599039-68599058 None:intergenic 35.0%
CCTTAATAGGTAGTATTCGA+TGG + chr4_1:68599036-68599055 Msa0567250:intron 35.0%
TTCAACTCATCCTTACAACT+GGG + chr4_1:68599100-68599119 Msa0567250:intron 35.0%
!! TCTCCTTGTTTCTGTCAAAT+TGG - chr4_1:68599144-68599163 None:intergenic 35.0%
TTTGTTCAACAGACACAATC+AGG + chr4_1:68599210-68599229 Msa0567250:intron 35.0%
!!! ATATGCCATTTTTTTCTGGG+CGG - chr4_1:68599436-68599455 None:intergenic 35.0%
TATTGACCTTTAGACGTTTG+TGG + chr4_1:68599453-68599472 Msa0567250:intron 35.0%
ATTGACCTTTAGACGTTTGT+GGG + chr4_1:68599454-68599473 Msa0567250:intron 35.0%
TATAACCCACAAACGTCTAA+AGG - chr4_1:68599462-68599481 None:intergenic 35.0%
TAGTATGGCTCTTGAATAAG+CGG + chr4_1:68599593-68599612 Msa0567250:intron 35.0%
! ACGCTCTCAAAGTTCAATTT+TGG + chr4_1:68599770-68599789 Msa0567250:intron 35.0%
ATTTACCGTGACAGTATAAG+GGG + chr4_1:68599811-68599830 Msa0567250:intron 35.0%
! CTATTCGAATCTTTTCCTGA+TGG - chr4_1:68599936-68599955 None:intergenic 35.0%
AATAGCTCTCTATGTTCAGA+AGG + chr4_1:68599951-68599970 Msa0567250:CDS 35.0%
GCAGCATTGCAATTTATTGA+TGG + chr4_1:68599973-68599992 Msa0567250:CDS 35.0%
!! AGTGATTAGTTCTAAAGCGA+TGG - chr4_1:68600033-68600052 None:intergenic 35.0%
TGAATACAAGCTATCACAAG+AGG + chr4_1:68600111-68600130 Msa0567250:CDS 35.0%
GATTGCAGACAACAAATCTT+TGG + chr4_1:68600286-68600305 Msa0567250:CDS 35.0%
TTGCAGACAACAAATCTTTG+GGG + chr4_1:68600288-68600307 Msa0567250:CDS 35.0%
AGGTTTCTCTGTATAACGAT+TGG - chr4_1:68600314-68600333 None:intergenic 35.0%
GAACATTCCTGATGTTTGTA+TGG + chr4_1:68600338-68600357 Msa0567250:CDS 35.0%
CTTGACTCTAACCATTCTTA+TGG + chr4_1:68600375-68600394 Msa0567250:CDS 35.0%
TACAGCACAAACCATAAGAA+TGG - chr4_1:68600389-68600408 None:intergenic 35.0%
CTGTAGTTTCCATAGGTATT+GGG + chr4_1:68600404-68600423 Msa0567250:CDS 35.0%
TAGTAACAACTGTTGGTATG+AGG + chr4_1:68600812-68600831 Msa0567250:CDS 35.0%
ATTGATGGAAACTCTAAACG+AGG + chr4_1:68600849-68600868 Msa0567250:CDS 35.0%
TTGATGGAAACTCTAAACGA+GGG + chr4_1:68600850-68600869 Msa0567250:CDS 35.0%
CCATTCAATTTAACCTGCAA+TGG - chr4_1:68600892-68600911 None:intergenic 35.0%
CCATTGCAGGTTAAATTGAA+TGG + chr4_1:68600889-68600908 Msa0567250:CDS 35.0%
!!! CATTTTTGGTATTGACAGTG+AGG + chr4_1:68600959-68600978 Msa0567250:CDS 35.0%
!! CTTGTTGAAAAAGCACTTCA+TGG + chr4_1:68600985-68601004 Msa0567250:CDS 35.0%
! TTCATGGTGAGTTTGGTAAT+TGG + chr4_1:68601001-68601020 Msa0567250:CDS 35.0%
GAAAATACCACACAACTGAA+AGG + chr4_1:68601279-68601298 Msa0567250:CDS 35.0%
TACTTCTGCTGAAGTAGTTA+AGG + chr4_1:68601380-68601399 Msa0567250:CDS 35.0%
!! CTAATAACGCTGATTCTGTT+GGG - chr4_1:68601437-68601456 None:intergenic 35.0%
!! TCTAATAACGCTGATTCTGT+TGG - chr4_1:68601438-68601457 None:intergenic 35.0%
AAGAAGATGTCTGTACTTGT+CGG + chr4_1:68601549-68601568 Msa0567250:CDS 35.0%
!! AGCTTTAAGAACTCTGTGTT+TGG + chr4_1:68601728-68601747 Msa0567250:CDS 35.0%
ATTAGAGTATAACCACTGTC+AGG - chr4_1:68601795-68601814 None:intergenic 35.0%
AAAGCCATAGCTAAAGAATG+TGG + chr4_1:68601930-68601949 Msa0567250:CDS 35.0%
TGTGGTATACTTACTGATGA+TGG + chr4_1:68601948-68601967 Msa0567250:CDS 35.0%
ACTAACTTATGTTTGTCGAG+CGG - chr4_1:68602151-68602170 None:intergenic 35.0%
! GATCTTTATACTACTTGCTG+CGG + chr4_1:68602496-68602515 Msa0567250:intron 35.0%
! TTTGGGACATAACTGTTTAC+AGG + chr4_1:68602575-68602594 Msa0567250:intron 35.0%
TTTACAGGTTGCCAAAGAAA+AGG + chr4_1:68602590-68602609 Msa0567250:intron 35.0%
! AATCACATCAGCCTTTTCTT+TGG - chr4_1:68602604-68602623 None:intergenic 35.0%
CTATTGTCAATGTGGTGAAA+TGG + chr4_1:68602646-68602665 Msa0567250:CDS 35.0%
ATTGTCAATGTGGTGAAATG+GGG + chr4_1:68602648-68602667 Msa0567250:CDS 35.0%
! GCTTTGGGTAAACTTGATTA+TGG + chr4_1:68602888-68602907 Msa0567250:CDS 35.0%
AACTTGATTATGGACACTCT+AGG + chr4_1:68602898-68602917 Msa0567250:CDS 35.0%
ACTTGATTATGGACACTCTA+GGG + chr4_1:68602899-68602918 Msa0567250:CDS 35.0%
! CTTTTCAAAAGTCCATCGTT+GGG - chr4_1:68602949-68602968 None:intergenic 35.0%
! TCTTTTCAAAAGTCCATCGT+TGG - chr4_1:68602950-68602969 None:intergenic 35.0%
ACTATGTGGAGGAATATCAT+TGG + chr4_1:68603006-68603025 Msa0567250:CDS 35.0%
ATGTTCAAATTGACGGTACA+AGG - chr4_1:68603312-68603331 None:intergenic 35.0%
AGAAAGATCTTCGTCACTTA+CGG - chr4_1:68603337-68603356 None:intergenic 35.0%
! ACAACTTTGAGAAACTTAGG+GGG - chr4_1:68603774-68603793 None:intergenic 35.0%
! CACAACTTTGAGAAACTTAG+GGG - chr4_1:68603773-68603792 None:intergenic 35.0%
AAAAGTAAACTTAGGGAGCT+TGG - chr4_1:68603594-68603613 None:intergenic 35.0%
TAAACTTAGGGGGCTAAAAT+TGG - chr4_1:68603692-68603711 None:intergenic 35.0%
TAAACTTAGGGGGCTAAAAT+TGG + chr4_1:68603692-68603711 Msa0567250:intron 35.0%
! CACAACTTTGAGAAACTTAG+GGG + chr4_1:68603773-68603792 Msa0567250:intron 35.0%
! ACAACTTTGAGAAACTTAGG+GGG + chr4_1:68603774-68603793 Msa0567250:intron 35.0%
CACTATCATGAGTCATGATA+TGG - chr4_1:68603980-68603999 None:intergenic 35.0%
!!! CTCTGTCTCTATTTTTTTGC+AGG + chr4_1:68604071-68604090 Msa0567250:intron 35.0%
!!! TGGTTACTCAGTGTTTTGAT+TGG + chr4_1:68604261-68604280 Msa0567250:CDS 35.0%
ACAAAACCATGATGGTTATG+AGG + chr4_1:68604350-68604369 Msa0567250:CDS 35.0%
AAATCTCTCTCCCATTCGAT+AGG + chr4_1:68596989-68597008 Msa0567250:five_prime_UTR 40.0%
GATTCGTCTTCCTATCGAAT+GGG - chr4_1:68597002-68597021 None:intergenic 40.0%
TGATTCGTCTTCCTATCGAA+TGG - chr4_1:68597003-68597022 None:intergenic 40.0%
ATAGGAAGACGAATCAGCAA+TGG + chr4_1:68597007-68597026 Msa0567250:exon 40.0%
CGAAGCTGAACAAATTAAGC+AGG + chr4_1:68597169-68597188 Msa0567250:CDS 40.0%
! GTTTTCTTCCATGGACAAGT+TGG + chr4_1:68597563-68597582 Msa0567250:intron 40.0%
GTGAATTTCCAACTTGTCCA+TGG - chr4_1:68597574-68597593 None:intergenic 40.0%
ACATCCATACCCCAAAATTG+GGG + chr4_1:68597825-68597844 Msa0567250:intron 40.0%
TTGCCGTCATCAGAAACAAA+AGG + chr4_1:68598149-68598168 Msa0567250:intron 40.0%
!!! GCTCCTTTTGTTTCTGATGA+CGG - chr4_1:68598155-68598174 None:intergenic 40.0%
CATGCCTTTCTCCTATTACT+AGG - chr4_1:68598259-68598278 None:intergenic 40.0%
CTAGTAATAGGAGAAAGGCA+TGG + chr4_1:68598257-68598276 Msa0567250:intron 40.0%
!! CAACAATGGTGGATGTTAGT+TGG + chr4_1:68598728-68598747 Msa0567250:intron 40.0%
! CAGGTTCCTAGTCAATTTTC+GGG - chr4_1:68598811-68598830 None:intergenic 40.0%
! CCAGGTTCCTAGTCAATTTT+CGG - chr4_1:68598812-68598831 None:intergenic 40.0%
! ACTAGTGTTACTGTTGAACC+AGG - chr4_1:68598830-68598849 None:intergenic 40.0%
CAAGTCCATCACACTATTTG+CGG - chr4_1:68598933-68598952 None:intergenic 40.0%
!! TGTGATGGACTTGCTAACAT+AGG + chr4_1:68598940-68598959 Msa0567250:intron 40.0%
AACTTAGGCGAATTTGACAG+TGG + chr4_1:68599009-68599028 Msa0567250:intron 40.0%
GTTCAACTCATCCTTACAAC+TGG + chr4_1:68599099-68599118 Msa0567250:intron 40.0%
!! CTGTCAAATTGGCACTGATT+AGG - chr4_1:68599133-68599152 None:intergenic 40.0%
GTGCCAATTTGACAGAAACA+AGG + chr4_1:68599138-68599157 Msa0567250:intron 40.0%
TTTCAAATATCGGTCCATGG+TGG + chr4_1:68599316-68599335 Msa0567250:intron 40.0%
CTAAGCAAACTGAGCAAGTA+AGG - chr4_1:68599535-68599554 None:intergenic 40.0%
CATTACCCCTTATACTGTCA+CGG - chr4_1:68599819-68599838 None:intergenic 40.0%
TCAATTCCTGAGTACCACTT+TGG + chr4_1:68599890-68599909 Msa0567250:intron 40.0%
ATATAGCCAAAGTGGTACTC+AGG - chr4_1:68599899-68599918 None:intergenic 40.0%
!!! ATCTGGTTTTCATATGCAGC+TGG + chr4_1:68600079-68600098 Msa0567250:intron 40.0%
TGCTTCTATTGTTCGTAGTC+AGG + chr4_1:68600171-68600190 Msa0567250:CDS 40.0%
AACATCAGGAATGTTCTCGA+AGG - chr4_1:68600334-68600353 None:intergenic 40.0%
ATGCATCCCATACAAACATC+AGG - chr4_1:68600348-68600367 None:intergenic 40.0%
GTTTGTGCTGTAGTTTCCAT+AGG + chr4_1:68600397-68600416 Msa0567250:CDS 40.0%
GCTGTAGTTTCCATAGGTAT+TGG + chr4_1:68600403-68600422 Msa0567250:CDS 40.0%
ACACCATCATATGTTCCCTT+TGG - chr4_1:68600448-68600467 None:intergenic 40.0%
! AAAGGGAACATATGATGGTG+TGG + chr4_1:68600447-68600466 Msa0567250:CDS 40.0%
! AAGGGAACATATGATGGTGT+GGG + chr4_1:68600448-68600467 Msa0567250:CDS 40.0%
ATCCCTACAGTTCATGGATT+TGG + chr4_1:68600528-68600547 Msa0567250:CDS 40.0%
GTCCAAATCCATGAACTGTA+GGG - chr4_1:68600533-68600552 None:intergenic 40.0%
TGTCCAAATCCATGAACTGT+AGG - chr4_1:68600534-68600553 None:intergenic 40.0%
AGATCTTTGTTCAGGTCAAC+AGG + chr4_1:68600566-68600585 Msa0567250:CDS 40.0%
GATCTTTGTTCAGGTCAACA+GGG + chr4_1:68600567-68600586 Msa0567250:CDS 40.0%
ATCGATGAATCGAGTTTGTC+AGG + chr4_1:68600706-68600725 Msa0567250:CDS 40.0%
!!! GAGAAGGAAAGGGTGTTTTT+CGG - chr4_1:68600755-68600774 None:intergenic 40.0%
TAGTTCCAGAGAGAAGGAAA+GGG - chr4_1:68600765-68600784 None:intergenic 40.0%
TTAGTTCCAGAGAGAAGGAA+AGG - chr4_1:68600766-68600785 None:intergenic 40.0%
TGTTGGTATGAGGACTGAAT+GGG + chr4_1:68600822-68600841 Msa0567250:CDS 40.0%
GACTGAATGGGGAAAATTGA+TGG + chr4_1:68600834-68600853 Msa0567250:CDS 40.0%
! AAAGCACTTCATGGTGAGTT+TGG + chr4_1:68600994-68601013 Msa0567250:CDS 40.0%
AAATGATGCAACGAAGCTAC+TGG + chr4_1:68601029-68601048 Msa0567250:CDS 40.0%
AGGAACCGCAACAACTATTA+TGG - chr4_1:68601076-68601095 None:intergenic 40.0%
TCTTTCTGCTTGTGAGACTA+TGG + chr4_1:68601176-68601195 Msa0567250:CDS 40.0%
CTTTCTGCTTGTGAGACTAT+GGG + chr4_1:68601177-68601196 Msa0567250:CDS 40.0%
TGCATTTGCACAGATAAGAC+AGG + chr4_1:68601210-68601229 Msa0567250:CDS 40.0%
GCATTTGCACAGATAAGACA+GGG + chr4_1:68601211-68601230 Msa0567250:CDS 40.0%
CTCTTTACCTTTCAGTTGTG+TGG - chr4_1:68601289-68601308 None:intergenic 40.0%
TTCTTCCGGACGGAATTAAA+CGG - chr4_1:68601534-68601553 None:intergenic 40.0%
CAAGTACAGACATCTTCTTC+CGG - chr4_1:68601548-68601567 None:intergenic 40.0%
CAGAGTTCTTAAAGCTTCAG+AGG - chr4_1:68601724-68601743 None:intergenic 40.0%
GTTCAAACTTGTATTGCAGC+TGG + chr4_1:68601864-68601883 Msa0567250:CDS 40.0%
GGATATCATACCAAGAATCC+AGG + chr4_1:68602022-68602041 Msa0567250:CDS 40.0%
GAGATTGTAACCTGGATTCT+TGG - chr4_1:68602035-68602054 None:intergenic 40.0%
CTTGATTATGGACACTCTAG+GGG + chr4_1:68602900-68602919 Msa0567250:CDS 40.0%
AAGAGGCTACTCGGAATTAA+TGG + chr4_1:68603078-68603097 Msa0567250:CDS 40.0%
! CAACTCCTTTGTATTTTGCC+AGG + chr4_1:68603137-68603156 Msa0567250:CDS 40.0%
GCCTAGAAAGTAAACTTAGG+GGG - chr4_1:68603650-68603669 None:intergenic 40.0%
GGCCTAGAAAGTAAACTTAG+GGG - chr4_1:68603651-68603670 None:intergenic 40.0%
GGGCCTAGAAAGTAAACTTA+GGG - chr4_1:68603652-68603671 None:intergenic 40.0%
TGGCATGAGTGGCTAAAATT+AGG + chr4_1:68603712-68603731 Msa0567250:intron 40.0%
GGCATGAGTGGCTAAAATTA+GGG + chr4_1:68603713-68603732 Msa0567250:intron 40.0%
GCATGAGTGGCTAAAATTAG+GGG + chr4_1:68603714-68603733 Msa0567250:intron 40.0%
CATGAGTGGCTAAAATTAGG+GGG + chr4_1:68603715-68603734 Msa0567250:intron 40.0%
AATAGTCACACTGCTTTGGT+TGG - chr4_1:68603879-68603898 None:intergenic 40.0%
AGTCAATAGTCACACTGCTT+TGG - chr4_1:68603883-68603902 None:intergenic 40.0%
GAGCAACAGCAAACATTAAG+TGG - chr4_1:68604052-68604071 None:intergenic 40.0%
!!! GTTGATAATTTTCGCCACAG+TGG + chr4_1:68604170-68604189 Msa0567250:CDS 40.0%
GTGGTGATAGTTGAATTCCT+TGG + chr4_1:68604201-68604220 Msa0567250:CDS 40.0%
AACCATAATTGCCAGCTTAG+AGG - chr4_1:68604246-68604265 None:intergenic 40.0%
CATTTCACGACAACAGCTAA+AGG - chr4_1:68604300-68604319 None:intergenic 40.0%
AAGGGGGAAATATTTGGCAG+TGG - chr4_1:68596823-68596842 None:intergenic 45.0%
GACGCAAAGGGGGAAATATT+TGG - chr4_1:68596829-68596848 None:intergenic 45.0%
AGGGCTTAGAAAGACGCAAA+GGG - chr4_1:68596841-68596860 None:intergenic 45.0%
AAGGGCTTAGAAAGACGCAA+AGG - chr4_1:68596842-68596861 None:intergenic 45.0%
TCGTAGAGTGGGGACTAAAA+CGG - chr4_1:68596891-68596910 None:intergenic 45.0%
AAGACGAATCAGCAATGGAG+TGG + chr4_1:68597012-68597031 Msa0567250:exon 45.0%
AATGGAGTGGAATCTGCTCA+AGG + chr4_1:68597025-68597044 Msa0567250:exon 45.0%
!!! GTTTTTTACGAGAGTGACGG+CGG - chr4_1:68597105-68597124 None:intergenic 45.0%
!!! GCGGTTTTTTACGAGAGTGA+CGG - chr4_1:68597108-68597127 None:intergenic 45.0%
! TTCGGAGCGTTTGTCAAGAT+CGG - chr4_1:68597153-68597172 None:intergenic 45.0%
CATCCATACCCCAAAATTGG+GGG + chr4_1:68597826-68597845 Msa0567250:intron 45.0%
ATCCATACCCCAAAATTGGG+GGG + chr4_1:68597827-68597846 Msa0567250:intron 45.0%
!! TTACTGGTCTTTGAGCCATG+AGG + chr4_1:68597889-68597908 Msa0567250:intron 45.0%
TCAAGGTCAAGAAGACCTCA+TGG - chr4_1:68597907-68597926 None:intergenic 45.0%
CCGAAAATTGACTAGGAACC+TGG + chr4_1:68598809-68598828 Msa0567250:intron 45.0%
ACTCATCCTTACAACTGGGA+AGG + chr4_1:68599104-68599123 Msa0567250:intron 45.0%
CAAGTTCCTCTTTGTCCTCA+TGG - chr4_1:68599246-68599265 None:intergenic 45.0%
CTTTGATATGTGGTCCACCA+TGG - chr4_1:68599333-68599352 None:intergenic 45.0%
CATGTCCGCCCAGAAAAAAA+TGG + chr4_1:68599428-68599447 Msa0567250:intron 45.0%
TTGATTCAAAGGTCGTGTCG+TGG + chr4_1:68599503-68599522 Msa0567250:intron 45.0%
!! CTGTCGGTTTCTATAGACGA+AGG + chr4_1:68600244-68600263 Msa0567250:CDS 45.0%
GTTTGTATGGGATGCATTGC+AGG + chr4_1:68600351-68600370 Msa0567250:CDS 45.0%
TGGCCAAAGGGAACATATGA+TGG + chr4_1:68600442-68600461 Msa0567250:CDS 45.0%
TTACCGCTGTTAGTGACTAC+AGG + chr4_1:68600503-68600522 Msa0567250:CDS 45.0%
TTGCCTGTAGTCACTAACAG+CGG - chr4_1:68600509-68600528 None:intergenic 45.0%
TTTGTTCAGGTCAACAGGGA+TGG + chr4_1:68600571-68600590 Msa0567250:CDS 45.0%
TTGTTCAGGTCAACAGGGAT+GGG + chr4_1:68600572-68600591 Msa0567250:CDS 45.0%
AAACACCCTTTCCTTCTCTC+TGG + chr4_1:68600757-68600776 Msa0567250:CDS 45.0%
! GCACTTTAGTTCCAGAGAGA+AGG - chr4_1:68600771-68600790 None:intergenic 45.0%
!! TCTCTCTGGAACTAAAGTGC+AGG + chr4_1:68600771-68600790 Msa0567250:CDS 45.0%
! TCTGGAACTAAAGTGCAGGA+TGG + chr4_1:68600775-68600794 Msa0567250:CDS 45.0%
AACTAAAGTGCAGGATGGTC+AGG + chr4_1:68600780-68600799 Msa0567250:CDS 45.0%
ACTAAAGTGCAGGATGGTCA+GGG + chr4_1:68600781-68600800 Msa0567250:CDS 45.0%
CTGTTGGTATGAGGACTGAA+TGG + chr4_1:68600821-68600840 Msa0567250:CDS 45.0%
GTTGGTATGAGGACTGAATG+GGG + chr4_1:68600823-68600842 Msa0567250:CDS 45.0%
ATGGAAACTCTAAACGAGGG+AGG + chr4_1:68600853-68600872 Msa0567250:CDS 45.0%
ATAGTTGTTGCGGTTCCTGA+AGG + chr4_1:68601078-68601097 Msa0567250:CDS 45.0%
TAGTTGTTGCGGTTCCTGAA+GGG + chr4_1:68601079-68601098 Msa0567250:CDS 45.0%
TTGAGCCGTTTAATTCCGTC+CGG + chr4_1:68601526-68601545 Msa0567250:CDS 45.0%
TACAGACATCTTCTTCCGGA+CGG - chr4_1:68601544-68601563 None:intergenic 45.0%
! CATCTGAGACGATATTTGCG+CGG - chr4_1:68601686-68601705 None:intergenic 45.0%
!! TGATGATGGTGTAGCCATAG+AGG + chr4_1:68601962-68601981 Msa0567250:CDS 45.0%
! GATGATGGTGTAGCCATAGA+GGG + chr4_1:68601963-68601982 Msa0567250:CDS 45.0%
ACGAAAACTTGGTCCCTCTA+TGG - chr4_1:68601979-68601998 None:intergenic 45.0%
AATGTCTGCCTCATGCAATG+CGG - chr4_1:68602239-68602258 None:intergenic 45.0%
CTTCGCGACTATTGTCAATG+TGG + chr4_1:68602638-68602657 Msa0567250:CDS 45.0%
TCAATGTGGTGAAATGGGGA+CGG + chr4_1:68602652-68602671 Msa0567250:CDS 45.0%
TCACAGCTGTTCAGTTGCTT+TGG + chr4_1:68602872-68602891 Msa0567250:CDS 45.0%
! CACAGCTGTTCAGTTGCTTT+GGG + chr4_1:68602873-68602892 Msa0567250:CDS 45.0%
TTCAAAAGTCCATCGTTGGG+AGG - chr4_1:68602946-68602965 None:intergenic 45.0%
!! CTTTTGAAAAGACCCCCTGT+TGG + chr4_1:68602958-68602977 Msa0567250:CDS 45.0%
TTTGATGGGAAGAGGCTACT+CGG + chr4_1:68603069-68603088 Msa0567250:CDS 45.0%
GCCCCCTAAGTTTACTTTCT+AGG + chr4_1:68603646-68603665 Msa0567250:intron 45.0%
GGGGCCTAGAAAGTAAACTT+AGG - chr4_1:68603653-68603672 None:intergenic 45.0%
! AGCACATGATTTGTAGCACC+TGG + chr4_1:68603906-68603925 Msa0567250:intron 45.0%
ACTGCATGATGAGAACATCC+AGG - chr4_1:68603927-68603946 None:intergenic 45.0%
GTGTGTGTGTGTGTGTGATA+TGG + chr4_1:68604009-68604028 Msa0567250:intron 45.0%
TGCCTCTAAGCTGGCAATTA+TGG + chr4_1:68604241-68604260 Msa0567250:CDS 45.0%
! GAAGTGCCTCATAACCATCA+TGG - chr4_1:68604359-68604378 None:intergenic 45.0%
!!! TATTTTTTTCTTTTTTTTAA+TGG + chr4_1:68597671-68597690 Msa0567250:intron 5.0%
!! AAAAAAAAAAAAACAAAAAA+TGG - chr4_1:68597713-68597732 None:intergenic 5.0%
!!! AATTAACTAATTATATTTTA+AGG + chr4_1:68599660-68599679 Msa0567250:intron 5.0%
!!! ATAACTAATAATTTATTTTT+GGG + chr4_1:68602558-68602577 Msa0567250:intron 5.0%
GGCTTAGAAAGACGCAAAGG+GGG - chr4_1:68596839-68596858 None:intergenic 50.0%
GGGCTTAGAAAGACGCAAAG+GGG - chr4_1:68596840-68596859 None:intergenic 50.0%
CGTCTTTCTAAGCCCTTCAG+CGG + chr4_1:68596845-68596864 Msa0567250:five_prime_UTR 50.0%
GTCTTTCTAAGCCCTTCAGC+GGG + chr4_1:68596846-68596865 Msa0567250:five_prime_UTR 50.0%
GTATGTTTGTGCCCGCTGAA+GGG - chr4_1:68596860-68596879 None:intergenic 50.0%
AGTATGTTTGTGCCCGCTGA+AGG - chr4_1:68596861-68596880 None:intergenic 50.0%
GCTTCGACGGAACGATTCTT+TGG - chr4_1:68597065-68597084 None:intergenic 50.0%
TCGTAAAAAACCGCCGCAGA+CGG + chr4_1:68597114-68597133 Msa0567250:CDS 50.0%
CAACCATACGAAACCGTCTG+CGG - chr4_1:68597130-68597149 None:intergenic 50.0%
TCCATACCCCAAAATTGGGG+GGG + chr4_1:68597828-68597847 Msa0567250:intron 50.0%
! ACGGTTTCCCCCCCAATTTT+GGG - chr4_1:68597838-68597857 None:intergenic 50.0%
CTTAGACGCGTCTGGTTGAA+TGG + chr4_1:68598662-68598681 Msa0567250:intron 50.0%
GAAGGCCGCAAATAGTGTGA+TGG + chr4_1:68598925-68598944 Msa0567250:intron 50.0%
TGACAGTGGACCGCCTTAAT+AGG + chr4_1:68599023-68599042 Msa0567250:intron 50.0%
AGGTCACCTTCCCAGTTGTA+AGG - chr4_1:68599113-68599132 None:intergenic 50.0%
TCAGGTCATGTCTAGCCATG+AGG + chr4_1:68599228-68599247 Msa0567250:intron 50.0%
GTCTAGCCATGAGGACAAAG+AGG + chr4_1:68599237-68599256 Msa0567250:intron 50.0%
GCTATCACAAGAGGCGATAG+AGG + chr4_1:68600120-68600139 Msa0567250:CDS 50.0%
GTGGAGTTGAAGCTGTTGCA+AGG + chr4_1:68600218-68600237 Msa0567250:CDS 50.0%
AGCTGTTGCAAGGAAGCTGT+CGG + chr4_1:68600228-68600247 Msa0567250:CDS 50.0%
AGTGGCAAGCCCAATACCTA+TGG - chr4_1:68600416-68600435 None:intergenic 50.0%
GTATTGGGCTTGCCACTGAA+GGG + chr4_1:68600419-68600438 Msa0567250:CDS 50.0%
CAGGCAATCCCTACAGTTCA+TGG + chr4_1:68600522-68600541 Msa0567250:CDS 50.0%
GGAGATCAAGTTCCAGCTGA+TGG + chr4_1:68600655-68600674 Msa0567250:CDS 50.0%
CTAAAGTGCAGGATGGTCAG+GGG + chr4_1:68600782-68600801 Msa0567250:CDS 50.0%
AACTCTAAACGAGGGAGGAG+AGG + chr4_1:68600858-68600877 Msa0567250:CDS 50.0%
AGAGGATGAGACTCCATTGC+AGG + chr4_1:68600876-68600895 Msa0567250:CDS 50.0%
AAGCCTGGAGCCTTCCATTA+GGG - chr4_1:68601578-68601597 None:intergenic 50.0%
AAAGCCTGGAGCCTTCCATT+AGG - chr4_1:68601579-68601598 None:intergenic 50.0%
ATGCACCTTTGCAGAAAGCC+TGG - chr4_1:68601593-68601612 None:intergenic 50.0%
GAACAGCTTCCTTTACCCCA+GGG - chr4_1:68601848-68601867 None:intergenic 50.0%
TGAACAGCTTCCTTTACCCC+AGG - chr4_1:68601849-68601868 None:intergenic 50.0%
AGCTGGAATAACCGTTCGCA+TGG + chr4_1:68601881-68601900 Msa0567250:CDS 50.0%
ATAACCGTTCGCATGGTCAC+TGG + chr4_1:68601888-68601907 Msa0567250:CDS 50.0%
ATCACCAGTGACCATGCGAA+CGG - chr4_1:68601895-68601914 None:intergenic 50.0%
CTTATGTTTGTCGAGCGGCA+AGG - chr4_1:68602146-68602165 None:intergenic 50.0%
! GGTGAGGTTGTTGCTGTTAC+TGG + chr4_1:68602193-68602212 Msa0567250:CDS 50.0%
! GTTGTTGCTGTTACTGGCGA+TGG + chr4_1:68602199-68602218 Msa0567250:CDS 50.0%
ATGTCTGCCTCATGCAATGC+GGG - chr4_1:68602238-68602257 None:intergenic 50.0%
GCATTGCATGAGGCAGACAT+TGG + chr4_1:68602238-68602257 Msa0567250:CDS 50.0%
GCAGACATTGGACTTGCCAT+GGG + chr4_1:68602250-68602269 Msa0567250:CDS 50.0%
CAATGTGGTGAAATGGGGAC+GGG + chr4_1:68602653-68602672 Msa0567250:CDS 50.0%
TTCGTCTCTGCATGCATCAC+TGG + chr4_1:68602747-68602766 Msa0567250:CDS 50.0%
TGGTGCAGACCCTGAAAGTA+AGG - chr4_1:68602851-68602870 None:intergenic 50.0%
AGCAACTGAACAGCTGTGAG+TGG - chr4_1:68602871-68602890 None:intergenic 50.0%
GTTGGGAGGTTCAGTAGCAA+GGG - chr4_1:68602932-68602951 None:intergenic 50.0%
TGAAAAGACCCCCTGTTGGA+AGG + chr4_1:68602962-68602981 Msa0567250:CDS 50.0%
GAAAAGACCCCCTGTTGGAA+GGG + chr4_1:68602963-68602982 Msa0567250:CDS 50.0%
AAAAGACCCCCTGTTGGAAG+GGG + chr4_1:68602964-68602983 Msa0567250:CDS 50.0%
GGGGCTAAAATTGGCATGAG+GGG - chr4_1:68603701-68603720 None:intergenic 50.0%
GGGGGCTAAAATTGGCATGA+GGG - chr4_1:68603700-68603719 None:intergenic 50.0%
AGGGGGCTAAAATTGGCATG+AGG - chr4_1:68603699-68603718 None:intergenic 50.0%
GGGGCTAAAATTGGCATGAG+TGG + chr4_1:68603701-68603720 Msa0567250:intron 50.0%
GTGGCTAAAATTAGGGGGCT+TGG + chr4_1:68603720-68603739 Msa0567250:intron 50.0%
! TCAGAGGCATGTTTGACAGC+TGG + chr4_1:68604139-68604158 Msa0567250:CDS 50.0%
CACCACTTGAAATGCCACTG+TGG - chr4_1:68604187-68604206 None:intergenic 50.0%
! GGTTATGAGGCACTTCCATC+TGG + chr4_1:68604363-68604382 Msa0567250:CDS 50.0%
ATCGTTCCGTCGAAGCTCTC+AGG + chr4_1:68597069-68597088 Msa0567250:CDS 55.0%
!!! TCCCCCCCAATTTTGGGGTA+TGG - chr4_1:68597832-68597851 None:intergenic 55.0%
! CGGTTTCCCCCCCAATTTTG+GGG - chr4_1:68597837-68597856 None:intergenic 55.0%
! CACGGTTTCCCCCCCAATTT+TGG - chr4_1:68597839-68597858 None:intergenic 55.0%
AATTGGGGGGGAAACCGTGA+TGG + chr4_1:68597840-68597859 Msa0567250:intron 55.0%
AAACACGGCTTAGACGCGTC+TGG + chr4_1:68598654-68598673 Msa0567250:intron 55.0%
TCACAAGAGGCGATAGAGGC+TGG + chr4_1:68600124-68600143 Msa0567250:CDS 55.0%
! GGTATTGGGCTTGCCACTGA+AGG + chr4_1:68600418-68600437 Msa0567250:CDS 55.0%
GGTTCCTGAAGGGTTACCAC+TGG + chr4_1:68601089-68601108 Msa0567250:CDS 55.0%
ACAGCCAGTGGTAACCCTTC+AGG - chr4_1:68601096-68601115 None:intergenic 55.0%
AGACTGAGTGTCACAGCCAG+TGG - chr4_1:68601108-68601127 None:intergenic 55.0%
GTACTTGTCGGCCTCCCTAA+TGG + chr4_1:68601561-68601580 Msa0567250:CDS 55.0%
TTGTCGGCCTCCCTAATGGA+AGG + chr4_1:68601565-68601584 Msa0567250:CDS 55.0%
AGGCTCCAGGCTTTCTGCAA+AGG + chr4_1:68601585-68601604 Msa0567250:CDS 55.0%
ACGATATTTGCGCGGTCTGC+AGG - chr4_1:68601678-68601697 None:intergenic 55.0%
ATCAAGGATCCTGTACGCCC+TGG + chr4_1:68601828-68601847 Msa0567250:CDS 55.0%
TCAAGGATCCTGTACGCCCT+GGG + chr4_1:68601829-68601848 Msa0567250:CDS 55.0%
TGTCTGCCTCATGCAATGCG+GGG - chr4_1:68602237-68602256 None:intergenic 55.0%
GGCAGACATTGGACTTGCCA+TGG + chr4_1:68602249-68602268 Msa0567250:CDS 55.0%
CTCAGTTCCAGCTATGCCCA+TGG - chr4_1:68602269-68602288 None:intergenic 55.0%
CATGGGCATAGCTGGAACTG+AGG + chr4_1:68602267-68602286 Msa0567250:CDS 55.0%
CGTTGGGAGGTTCAGTAGCA+AGG - chr4_1:68602933-68602952 None:intergenic 55.0%
GCTACTGAACCTCCCAACGA+TGG + chr4_1:68602934-68602953 Msa0567250:CDS 55.0%
! AGCTTGCTCCCCTTCCAACA+GGG - chr4_1:68602975-68602994 None:intergenic 55.0%
! AAGCTTGCTCCCCTTCCAAC+AGG - chr4_1:68602976-68602995 None:intergenic 55.0%
CGCCACAGTGGCATTTCAAG+TGG + chr4_1:68604182-68604201 Msa0567250:CDS 55.0%
!! CAGTGCTGGCAAATGCTCCA+AGG - chr4_1:68604221-68604240 None:intergenic 55.0%
TATGCTAGCTCGGGACCAGA+TGG - chr4_1:68604381-68604400 None:intergenic 55.0%
GTTCCGTCGAAGCTCTCAGG+AGG + chr4_1:68597072-68597091 Msa0567250:CDS 60.0%
CCACCTCCTGAGAGCTTCGA+CGG - chr4_1:68597078-68597097 None:intergenic 60.0%
CCATACGAAACCGTCTGCGG+CGG - chr4_1:68597127-68597146 None:intergenic 60.0%
TTGGGCTTGCCACTGAAGGG+TGG + chr4_1:68600422-68600441 Msa0567250:CDS 60.0%
TGCCACTGAAGGGTGGCCAA+AGG + chr4_1:68600429-68600448 Msa0567250:CDS 60.0%
GCCACTGAAGGGTGGCCAAA+GGG + chr4_1:68600430-68600449 Msa0567250:CDS 60.0%
TCCCTTTGGCCACCCTTCAG+TGG - chr4_1:68600434-68600453 None:intergenic 60.0%
CCTGGAGCCTTCCATTAGGG+AGG - chr4_1:68601575-68601594 None:intergenic 60.0%
CCTCCCTAATGGAAGGCTCC+AGG + chr4_1:68601572-68601591 Msa0567250:CDS 60.0%
CAAGGATCCTGTACGCCCTG+GGG + chr4_1:68601830-68601849 Msa0567250:CDS 60.0%
TCCTGTACGCCCTGGGGTAA+AGG + chr4_1:68601836-68601855 Msa0567250:CDS 60.0%
TCCTTTACCCCAGGGCGTAC+AGG - chr4_1:68601840-68601859 None:intergenic 60.0%
GTCTGCCTCATGCAATGCGG+GGG - chr4_1:68602236-68602255 None:intergenic 60.0%
GGACTTGCCATGGGCATAGC+TGG + chr4_1:68602259-68602278 Msa0567250:CDS 60.0%
CTTGCTCCCCTTCCAACAGG+GGG - chr4_1:68602973-68602992 None:intergenic 60.0%
GCTTGCTCCCCTTCCAACAG+GGG - chr4_1:68602974-68602993 None:intergenic 60.0%
! CCAGCTTAGAGGCACAGTGC+TGG - chr4_1:68604235-68604254 None:intergenic 60.0%
CCAGCACTGTGCCTCTAAGC+TGG + chr4_1:68604232-68604251 Msa0567250:CDS 60.0%
CCGTCGAAGCTCTCAGGAGG+TGG + chr4_1:68597075-68597094 Msa0567250:CDS 65.0%
CCGCCGCAGACGGTTTCGTA+TGG + chr4_1:68597124-68597143 Msa0567250:CDS 65.0%
TGACGCCCCCGCATTGCATG+AGG + chr4_1:68602228-68602247 Msa0567250:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 68596781 68604401 68596781 ID=Msa0567250;Name=Msa0567250
chr4_1 mRNA 68596781 68604401 68596781 ID=Msa0567250-mRNA-1;Parent=Msa0567250;Name=Msa0567250-mRNA-1;_AED=0.08;_eAED=0.08;_QI=245|0.66|0.57|1|1|1|7|0|1037
chr4_1 exon 68596781 68597199 68596781 ID=Msa0567250-mRNA-1:exon:22649;Parent=Msa0567250-mRNA-1
chr4_1 exon 68599940 68599994 68599940 ID=Msa0567250-mRNA-1:exon:22650;Parent=Msa0567250-mRNA-1
chr4_1 exon 68600098 68602043 68600098 ID=Msa0567250-mRNA-1:exon:22651;Parent=Msa0567250-mRNA-1
chr4_1 exon 68602130 68602288 68602130 ID=Msa0567250-mRNA-1:exon:22652;Parent=Msa0567250-mRNA-1
chr4_1 exon 68602597 68602768 68602597 ID=Msa0567250-mRNA-1:exon:22653;Parent=Msa0567250-mRNA-1
chr4_1 exon 68602860 68603158 68602860 ID=Msa0567250-mRNA-1:exon:22654;Parent=Msa0567250-mRNA-1
chr4_1 exon 68604093 68604401 68604093 ID=Msa0567250-mRNA-1:exon:22655;Parent=Msa0567250-mRNA-1
chr4_1 five_prime_UTR 68596781 68597025 68596781 ID=Msa0567250-mRNA-1:five_prime_utr;Parent=Msa0567250-mRNA-1
chr4_1 CDS 68597026 68597199 68597026 ID=Msa0567250-mRNA-1:cds;Parent=Msa0567250-mRNA-1
chr4_1 CDS 68599940 68599994 68599940 ID=Msa0567250-mRNA-1:cds;Parent=Msa0567250-mRNA-1
chr4_1 CDS 68600098 68602043 68600098 ID=Msa0567250-mRNA-1:cds;Parent=Msa0567250-mRNA-1
chr4_1 CDS 68602130 68602288 68602130 ID=Msa0567250-mRNA-1:cds;Parent=Msa0567250-mRNA-1
chr4_1 CDS 68602597 68602768 68602597 ID=Msa0567250-mRNA-1:cds;Parent=Msa0567250-mRNA-1
chr4_1 CDS 68602860 68603158 68602860 ID=Msa0567250-mRNA-1:cds;Parent=Msa0567250-mRNA-1
chr4_1 CDS 68604093 68604401 68604093 ID=Msa0567250-mRNA-1:cds;Parent=Msa0567250-mRNA-1
Gene Sequence

>Msa0567250

ATGGAGTGGAATCTGCTCAAGGATTTCGAGCTTGAACCAAAGAATCGTTCCGTCGAAGCTCTCAGGAGGTGGAGATCCGCCGTCACTCTCGTAAAAAACCGCCGCAGACGGTTTCGTATGGTTGCCGATCTTGACAAACGCTCCGAAGCTGAACAAATTAAGCAGGGAATTAAGGAAAAGATTCGAATAGCTCTCTATGTTCAGAAGGCAGCATTGCAATTTATTGATGCTGGTAATCGAGTTGAATACAAGCTATCACAAGAGGCGATAGAGGCTGGTTTTGACATTCATCCAAATGAGATTGCTTCTATTGTTCGTAGTCAGGATTATAAGAACTTGAGTAATAATGGTGGAGTTGAAGCTGTTGCAAGGAAGCTGTCGGTTTCTATAGACGAAGGTGTCAGTGAAGCAAGTGTAGATTGCAGACAACAAATCTTTGGGGCCAATCGTTATACAGAGAAACCTTCGAGAACATTCCTGATGTTTGTATGGGATGCATTGCAGGACTTGACTCTAACCATTCTTATGGTTTGTGCTGTAGTTTCCATAGGTATTGGGCTTGCCACTGAAGGGTGGCCAAAGGGAACATATGATGGTGTGGGAATCATACTCAGTATATTCTTGGTAGTCATTGTTACCGCTGTTAGTGACTACAGGCAATCCCTACAGTTCATGGATTTGGACAAAGAGAAAAAAAAGATCTTTGTTCAGGTCAACAGGGATGGGAAAAGAAAGAAGATCTCAATATATGATGTAGTAGTTGGTGATATTGTTCATTTGTCTACTGGAGATCAAGTTCCAGCTGATGGAATTTATATATCTGGATACTCTTTGCTTATCGATGAATCGAGTTTGTCAGGTGAGAGCGAACCTGTATTTATAACCGAAAAACACCCTTTCCTTCTCTCTGGAACTAAAGTGCAGGATGGTCAGGGGAAAATGTTAGTAACAACTGTTGGTATGAGGACTGAATGGGGAAAATTGATGGAAACTCTAAACGAGGGAGGAGAGGATGAGACTCCATTGCAGGTTAAATTGAATGGAGTTGCTACTATAATTGGTAAAATCGGTTTATTTTTTGCCATTGTGACATTTTTGGTATTGACAGTGAGGTTTCTTGTTGAAAAAGCACTTCATGGTGAGTTTGGTAATTGGTCTTCAAATGATGCAACGAAGCTACTGGACTTCTTTGCTATTGCTGTAACCATAATAGTTGTTGCGGTTCCTGAAGGGTTACCACTGGCTGTGACACTCAGTCTTGCTTTTGCAATGAAAAAATTAATGAATGACATGGCACTTGTGAGACATCTTTCTGCTTGTGAGACTATGGGTTCAGCTAGTTGCATTTGCACAGATAAGACAGGGACATTAACAACTAACCATATGGTGGTTAACAAAATATGGATATGTGAAAATACCACACAACTGAAAGGTAAAGAGAGTGCTGATGAACTGAAAACAAACATATCTGAAGGAGTTTTAAGCATCCTTTCGCAAGCTATATTTCAAAATACTTCTGCTGAAGTAGTTAAGGATAAAAACGGAAAGAACACAATATTGGGAAGCCCAACAGAATCAGCGTTATTAGAATTTGGCTTGCTTTTGGGTTCTGAGTTTGATGCTCGCAACCGCAGTAAAGCTTATAAGATACTTAAGCTTGAGCCGTTTAATTCCGTCCGGAAGAAGATGTCTGTACTTGTCGGCCTCCCTAATGGAAGGCTCCAGGCTTTCTGCAAAGGTGCATCTGAAATAATATTAGAAATGTGTGATAAAATTATTGATTGCAATGGAGAAGTCGTTGATCTTCCTGCAGACCGCGCAAATATCGTCTCAGATGTGATAAATAGCTTTGCCTCTGAAGCTTTAAGAACTCTGTGTTTGGCTGTCAAAGATATAAATGAACCTCAGGGAGAAGCTAACATTCCTGACAGTGGTTATACTCTAATAGCTTTAGTTGGAATCAAGGATCCTGTACGCCCTGGGGTAAAGGAAGCTGTTCAAACTTGTATTGCAGCTGGAATAACCGTTCGCATGGTCACTGGTGATAACATAAATACAGCTAAAGCCATAGCTAAAGAATGTGGTATACTTACTGATGATGGTGTAGCCATAGAGGGACCAAGTTTTCGTGAATTATCTGATGAGCAAATGAAGGATATCATACCAAGAATCCAGGTAATGGCACGATCCTTGCCGCTCGACAAACATAAGTTAGTGACCAATTTGAGAAATATGTTTGGTGAGGTTGTTGCTGTTACTGGCGATGGAACAAATGACGCCCCCGCATTGCATGAGGCAGACATTGGACTTGCCATGGGCATAGCTGGAACTGAGGTTGCCAAAGAAAAGGCTGATGTGATTATAATGGACGATAACTTCGCGACTATTGTCAATGTGGTGAAATGGGGACGGGCAGTATATATAAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTGAATGTTGTTGCACTTATTATCAACTTCGTCTCTGCATGCATCACTGGGTCTGCACCACTCACAGCTGTTCAGTTGCTTTGGGTAAACTTGATTATGGACACTCTAGGGGCTTTAGCCCTTGCTACTGAACCTCCCAACGATGGACTTTTGAAAAGACCCCCTGTTGGAAGGGGAGCAAGCTTTATCACTAAAACTATGTGGAGGAATATCATTGGTCAAAGTATTTATCAATTAATCGTACTTGCGATTCTAAATTTTGATGGGAAGAGGCTACTCGGAATTAATGGTTCAGATGCAACTGAAGTGCTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAGGTGTTTAATGAGATAAACAGCAGAGATATAGAAAAGATAAACATATTCAGAGGCATGTTTGACAGCTGGATATTTTTGTTGATAATTTTCGCCACAGTGGCATTTCAAGTGGTGATAGTTGAATTCCTTGGAGCATTTGCCAGCACTGTGCCTCTAAGCTGGCAATTATGGTTACTCAGTGTTTTGATTGGAGCAATTAGCATGCCTTTAGCTGTTGTCGTGAAATGCATCCCAGTTGAAAGAAAAAATAGTATTAAACAAAACCATGATGGTTATGAGGCACTTCCATCTGGTCCCGAGCTAGCATAA
Protein sequence

>Msa0567250

MEWNLLKDFELEPKNRSVEALRRWRSAVTLVKNRRRRFRMVADLDKRSEAEQIKQGIKEKIRIALYVQKAALQFIDAGNRVEYKLSQEAIEAGFDIHPNEIASIVRSQDYKNLSNNGGVEAVARKLSVSIDEGVSEASVDCRQQIFGANRYTEKPSRTFLMFVWDALQDLTLTILMVCAVVSIGIGLATEGWPKGTYDGVGIILSIFLVVIVTAVSDYRQSLQFMDLDKEKKKIFVQVNRDGKRKKISIYDVVVGDIVHLSTGDQVPADGIYISGYSLLIDESSLSGESEPVFITEKHPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIGLFFAIVTFLVLTVRFLVEKALHGEFGNWSSNDATKLLDFFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDMALVRHLSACETMGSASCICTDKTGTLTTNHMVVNKIWICENTTQLKGKESADELKTNISEGVLSILSQAIFQNTSAEVVKDKNGKNTILGSPTESALLEFGLLLGSEFDARNRSKAYKILKLEPFNSVRKKMSVLVGLPNGRLQAFCKGASEIILEMCDKIIDCNGEVVDLPADRANIVSDVINSFASEALRTLCLAVKDINEPQGEANIPDSGYTLIALVGIKDPVRPGVKEAVQTCIAAGITVRMVTGDNINTAKAIAKECGILTDDGVAIEGPSFRELSDEQMKDIIPRIQVMARSLPLDKHKLVTNLRNMFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKEKADVIIMDDNFATIVNVVKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLLKRPPVGRGASFITKTMWRNIIGQSIYQLIVLAILNFDGKRLLGINGSDATEVLNTLIFNSFVFCQVFNEINSRDIEKINIFRGMFDSWIFLLIIFATVAFQVVIVEFLGAFASTVPLSWQLWLLSVLIGAISMPLAVVVKCIPVERKNSIKQNHDGYEALPSGPELA*