AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0571120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0571120 MtrunA17_Chr8g0386241 93.370 181 11 1 1 180 1 181 3.53e-123 345
Msa0571120 MtrunA17_Chr7g0224801 70.732 82 24 0 90 171 81 162 9.18e-42 138
Msa0571120 MtrunA17_Chr7g0248721 54.369 103 43 2 73 172 109 210 8.92e-31 111
Msa0571120 MtrunA17_Chr1g0150801 54.217 83 38 0 77 159 77 159 5.30e-29 105
Msa0571120 MtrunA17_Chr7g0218081 54.762 84 38 0 83 166 391 474 2.01e-27 107
Msa0571120 MtrunA17_Chr7g0218081 52.632 57 26 1 102 158 228 283 1.16e-15 73.9
Msa0571120 MtrunA17_Chr8g0335811 46.535 101 53 1 75 174 127 227 6.24e-27 102
Msa0571120 MtrunA17_Chr5g0418191 49.451 91 46 0 83 173 301 391 7.03e-27 105
Msa0571120 MtrunA17_Chr5g0418191 45.570 79 41 2 102 179 151 228 2.80e-14 70.1
Msa0571120 MtrunA17_Chr2g0294231 57.746 71 30 0 89 159 190 260 1.93e-26 103
Msa0571120 MtrunA17_Chr5g0445311 55.952 84 37 0 83 166 345 428 2.05e-26 104
Msa0571120 MtrunA17_Chr5g0445311 56.897 58 24 1 102 159 200 256 1.05e-16 77.0
Msa0571120 MtrunA17_Chr3g0106491 57.500 80 34 0 81 160 344 423 2.39e-26 104
Msa0571120 MtrunA17_Chr3g0106491 40.909 110 58 3 54 159 148 254 4.69e-19 84.0
Msa0571120 MtrunA17_Chr4g0004911 47.706 109 57 0 78 186 312 420 2.58e-26 104
Msa0571120 MtrunA17_Chr4g0004911 49.231 65 33 0 95 159 177 241 7.87e-16 74.7
Msa0571120 MtrunA17_Chr5g0418781 52.439 82 39 0 77 158 99 180 4.86e-26 100
Msa0571120 MtrunA17_Chr3g0101131 57.692 78 33 0 83 160 396 473 9.12e-26 103
Msa0571120 MtrunA17_Chr3g0101131 53.030 66 30 1 102 167 243 307 8.48e-18 80.5
Msa0571120 MtrunA17_Chr4g0042831 55.128 78 35 0 83 160 259 336 1.31e-25 101
Msa0571120 MtrunA17_Chr4g0042831 54.386 57 26 0 102 158 145 201 6.00e-16 74.7
Msa0571120 MtrunA17_Chr1g0194481 48.889 90 45 1 71 159 126 215 2.08e-25 100
Msa0571120 MtrunA17_Chr4g0051881 45.918 98 51 1 89 186 165 260 2.12e-25 100
Msa0571120 MtrunA17_Chr5g0432161 54.762 84 38 0 77 160 396 479 2.45e-25 102
Msa0571120 MtrunA17_Chr5g0432161 56.897 58 24 1 102 159 244 300 2.26e-16 76.3
Msa0571120 MtrunA17_Chr7g0243891 48.000 100 49 2 83 180 355 453 2.92e-25 101
Msa0571120 MtrunA17_Chr7g0243891 40.000 85 50 1 102 186 216 299 4.99e-15 72.4
Msa0571120 MtrunA17_Chr3g0129361 47.312 93 47 2 85 175 127 219 7.49e-25 96.3
Msa0571120 MtrunA17_Chr8g0383351 44.565 92 50 1 85 175 142 233 9.47e-25 96.3
Msa0571120 MtrunA17_Chr4g0068541 57.143 70 30 0 89 158 195 264 1.20e-24 99.4
Msa0571120 MtrunA17_Chr7g0270191 51.111 90 39 2 70 159 118 202 1.26e-24 97.4
Msa0571120 MtrunA17_Chr3g0079691 48.544 103 51 1 66 166 457 559 1.54e-24 99.8
Msa0571120 MtrunA17_Chr3g0079691 37.069 116 60 5 53 159 225 336 1.36e-15 73.9
Msa0571120 MtrunA17_Chr7g0249311 47.115 104 53 2 83 185 373 475 7.92e-24 97.8
Msa0571120 MtrunA17_Chr7g0249311 35.484 155 67 6 39 182 130 262 5.13e-16 75.1
Msa0571120 MtrunA17_Chr3g0129321 52.857 70 33 0 89 158 105 174 2.10e-23 92.0
Msa0571120 MtrunA17_Chr7g0249301 52.564 78 37 0 83 160 273 350 7.14e-23 94.0
Msa0571120 MtrunA17_Chr7g0249301 39.773 88 47 2 101 183 61 147 4.01e-14 69.3
Msa0571120 MtrunA17_Chr5g0443131 54.286 70 32 0 89 158 144 213 1.67e-22 92.0
Msa0571120 MtrunA17_Chr7g0270831 45.122 82 44 1 87 167 201 282 1.47e-21 90.9
Msa0571120 MtrunA17_Chr2g0322391 41.758 91 52 1 75 164 322 412 1.65e-21 90.9
Msa0571120 MtrunA17_Chr4g0075201 46.835 79 41 1 87 164 252 330 2.04e-21 90.5
Msa0571120 MtrunA17_Chr8g0383251 37.398 123 66 2 38 160 55 166 2.24e-21 86.3
Msa0571120 MtrunA17_Chr2g0288871 46.753 77 40 1 85 160 288 364 5.29e-21 89.7
Msa0571120 MtrunA17_Chr5g0447701 42.045 88 49 1 73 158 221 308 2.07e-20 87.0
Msa0571120 MtrunA17_Chr5g0447701 48.438 64 32 1 100 163 90 152 5.17e-13 66.2
Msa0571120 MtrunA17_Chr3g0099641 44.048 84 46 1 85 167 234 317 3.22e-20 87.0
Msa0571120 MtrunA17_Chr4g0025051 45.122 82 44 1 87 167 320 401 8.06e-19 83.2
Msa0571120 MtrunA17_Chr7g0263531 51.471 68 33 0 91 158 350 417 1.08e-18 82.8
Msa0571120 MtrunA17_Chr7g0263531 55.357 56 24 1 103 158 190 244 9.79e-16 74.3
Msa0571120 MtrunA17_Chr4g0025061 42.857 84 47 1 85 167 343 426 1.12e-18 82.8
Msa0571120 MtrunA17_Chr2g0333851 46.154 78 41 1 100 176 167 244 1.15e-18 81.6
Msa0571120 MtrunA17_Chr1g0188941 47.143 70 37 0 91 160 40 109 2.05e-18 76.6
Msa0571120 MtrunA17_Chr4g0074001 46.154 78 40 1 87 162 344 421 6.22e-18 80.5
Msa0571120 MtrunA17_Chr3g0136961 54.386 57 25 1 103 158 139 195 7.11e-18 79.3
Msa0571120 MtrunA17_Chr7g0216891 42.045 88 47 3 84 167 198 285 7.81e-18 80.5
Msa0571120 MtrunA17_Chr4g0051181 45.333 75 40 1 87 160 228 302 1.02e-17 80.1
Msa0571120 MtrunA17_Chr7g0238921 52.632 57 27 0 102 158 124 180 1.08e-17 79.0
Msa0571120 MtrunA17_Chr1g0189391 50.000 72 35 1 88 158 83 154 1.52e-17 79.0
Msa0571120 MtrunA17_Chr2g0302391 37.864 103 60 2 63 164 175 274 5.06e-17 77.8
Msa0571120 MtrunA17_Chr4g0001361 47.059 68 35 1 100 166 160 227 1.20e-16 76.3
Msa0571120 MtrunA17_Chr4g0060271 43.836 73 40 1 87 158 240 312 2.52e-16 76.3
Msa0571120 MtrunA17_Chr6g0485431 43.662 71 39 1 89 158 141 211 2.40e-15 72.8
Msa0571120 MtrunA17_Chr1g0150281 46.774 62 32 1 103 163 141 202 2.86e-15 72.0
Msa0571120 MtrunA17_Chr5g0447711 44.118 68 38 0 91 158 219 286 2.93e-15 72.4
Msa0571120 MtrunA17_Chr1g0147881 41.176 68 39 1 99 165 259 326 4.07e-14 69.3
Msa0571120 MtrunA17_Chr4g0071521 45.902 61 32 1 99 158 242 302 5.06e-14 68.9
Msa0571120 MtrunA17_Chr8g0347251 47.458 59 28 1 101 156 135 193 8.44e-14 68.6
Msa0571120 MtrunA17_Chr4g0024391 32.727 110 72 2 62 169 188 297 1.02e-13 68.6
Msa0571120 MtrunA17_Chr1g0150271 43.548 62 34 1 100 160 99 160 1.03e-13 67.4
Msa0571120 MtrunA17_Chr7g0244981 36.607 112 64 4 52 156 68 179 1.68e-13 67.0
Msa0571120 MtrunA17_Chr3g0126391 47.458 59 28 1 101 156 132 190 2.32e-13 67.0
Msa0571120 MtrunA17_Chr7g0275531 47.458 59 28 1 101 156 117 175 3.03e-13 66.6
Msa0571120 MtrunA17_Chr5g0432071 50.877 57 27 1 102 158 104 159 3.06e-13 65.5
Msa0571120 MtrunA17_Chr7g0244971 36.066 122 70 5 52 165 68 189 3.86e-13 66.2
Msa0571120 MtrunA17_Chr8g0387981 32.308 130 76 4 35 156 64 189 6.17e-13 65.9
Msa0571120 MtrunA17_Chr4g0053281 40.541 74 42 2 99 171 263 335 1.38e-12 64.7
Msa0571120 MtrunA17_Chr7g0270051 46.552 58 30 1 103 159 54 111 1.58e-12 64.3
Msa0571120 MtrunA17_Chr8g0348311 36.842 76 46 2 86 160 140 214 3.78e-12 63.5
Msa0571120 MtrunA17_Chr5g0401821 44.262 61 33 1 99 158 196 256 1.02e-11 62.0
Msa0571120 MtrunA17_Chr8g0387501 45.000 60 32 1 101 159 128 187 1.16e-11 62.0
Msa0571120 MtrunA17_Chr2g0315361 33.065 124 74 3 37 156 87 205 1.86e-11 61.6
Msa0571120 MtrunA17_Chr1g0184691 42.623 61 34 1 99 158 290 350 4.68e-11 60.5
Msa0571120 MtrunA17_Chr2g0293481 39.344 61 36 1 100 159 265 325 6.15e-11 60.5
Msa0571120 MtrunA17_Chr5g0428351 42.105 57 30 1 103 156 184 240 9.62e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0571120 AT5G13080.1 70.238 84 25 0 88 171 53 136 5.46e-42 138
Msa0571120 AT3G01970.1 67.470 83 27 0 89 171 52 134 7.04e-38 128
Msa0571120 AT1G64000.1 55.789 95 42 0 80 174 92 186 1.45e-34 121
Msa0571120 AT5G41570.1 59.302 86 35 0 89 174 85 170 1.95e-32 115
Msa0571120 AT2G46130.1 52.809 89 42 0 83 171 11 99 1.34e-30 108
Msa0571120 AT2G30250.1 58.974 78 32 0 83 160 309 386 1.04e-26 104
Msa0571120 AT2G30250.1 35.200 125 63 3 43 159 108 222 1.34e-13 68.6
Msa0571120 AT5G49520.1 59.155 71 29 0 89 159 208 278 1.07e-26 105
Msa0571120 AT5G64810.1 51.111 90 39 1 74 158 77 166 1.45e-26 100
Msa0571120 AT1G69310.4 52.500 80 38 0 79 158 124 203 2.15e-26 102
Msa0571120 AT1G69310.2 52.500 80 38 0 79 158 124 203 2.15e-26 102
Msa0571120 AT1G69310.1 52.500 80 38 0 79 158 124 203 2.15e-26 102
Msa0571120 AT4G26640.7 55.952 84 37 0 83 166 322 405 4.06e-26 104
Msa0571120 AT4G26640.7 55.000 60 26 1 100 159 169 227 6.98e-17 78.2
Msa0571120 AT4G26640.5 55.952 84 37 0 83 166 186 269 4.09e-26 103
Msa0571120 AT4G26640.5 55.000 60 26 1 100 159 33 91 9.42e-17 77.4
Msa0571120 AT4G26640.6 55.952 84 37 0 83 166 186 269 4.09e-26 103
Msa0571120 AT4G26640.6 55.000 60 26 1 100 159 33 91 9.42e-17 77.4
Msa0571120 AT4G26640.4 55.952 84 37 0 83 166 186 269 4.09e-26 103
Msa0571120 AT4G26640.4 55.000 60 26 1 100 159 33 91 9.42e-17 77.4
Msa0571120 AT4G26640.3 55.952 84 37 0 83 166 186 269 4.09e-26 103
Msa0571120 AT4G26640.3 55.000 60 26 1 100 159 33 91 9.42e-17 77.4
Msa0571120 AT4G26640.1 55.952 84 37 0 83 166 290 373 5.38e-26 103
Msa0571120 AT4G26640.1 55.000 60 26 1 100 159 137 195 8.36e-17 77.8
Msa0571120 AT4G26640.2 55.952 84 37 0 83 166 362 445 5.38e-26 104
Msa0571120 AT4G26640.2 55.000 60 26 1 100 159 209 267 7.82e-17 77.8
Msa0571120 AT2G44745.1 46.237 93 49 1 83 174 126 218 6.17e-26 99.4
Msa0571120 AT1G13960.1 52.632 76 36 0 83 158 390 465 9.65e-26 103
Msa0571120 AT1G13960.1 41.071 112 58 4 48 158 180 284 9.33e-19 83.6
Msa0571120 AT1G13960.2 52.632 76 36 0 83 158 237 312 1.07e-25 101
Msa0571120 AT1G13960.2 41.071 112 58 4 48 158 27 131 2.71e-18 81.6
Msa0571120 AT2G46130.2 49.438 89 41 1 83 171 11 95 1.22e-25 95.5
Msa0571120 AT5G07100.2 44.444 117 58 1 44 160 90 199 1.38e-25 98.6
Msa0571120 AT5G07100.2 46.875 64 34 0 102 165 24 87 1.17e-14 69.7
Msa0571120 AT5G07100.4 44.444 117 58 1 44 160 90 199 1.38e-25 98.6
Msa0571120 AT5G07100.4 46.875 64 34 0 102 165 24 87 1.17e-14 69.7
Msa0571120 AT5G07100.5 44.444 117 58 1 44 160 90 199 1.38e-25 98.6
Msa0571120 AT5G07100.5 46.875 64 34 0 102 165 24 87 1.17e-14 69.7
Msa0571120 AT5G07100.3 44.444 117 58 1 44 160 90 199 1.38e-25 98.6
Msa0571120 AT5G07100.3 46.875 64 34 0 102 165 24 87 1.17e-14 69.7
Msa0571120 AT5G26170.1 55.714 70 31 0 89 158 100 169 2.21e-25 96.7
Msa0571120 AT2G03340.1 45.000 100 55 0 83 182 396 495 2.31e-25 102
Msa0571120 AT2G03340.1 39.231 130 64 4 60 182 214 335 4.89e-18 81.3
Msa0571120 AT4G39410.1 49.367 79 40 0 80 158 201 279 2.72e-25 99.8
Msa0571120 AT5G07100.1 45.217 115 56 1 44 158 183 290 5.12e-25 99.0
Msa0571120 AT5G07100.1 46.875 64 34 0 102 165 117 180 8.84e-15 71.2
Msa0571120 AT2G38470.1 46.903 113 49 1 59 160 308 420 6.26e-25 100
Msa0571120 AT2G38470.1 51.724 58 27 1 102 159 184 240 8.70e-15 72.0
Msa0571120 AT5G56270.1 57.692 78 33 0 83 160 468 545 8.56e-25 100
Msa0571120 AT5G56270.1 50.877 57 27 1 102 158 273 328 4.69e-15 72.8
Msa0571120 AT3G01080.2 53.846 78 36 0 83 160 325 402 1.07e-24 100
Msa0571120 AT3G01080.2 52.632 57 26 1 102 158 205 260 4.65e-15 72.8
Msa0571120 AT3G01080.1 53.846 78 36 0 83 160 287 364 1.56e-24 99.4
Msa0571120 AT3G01080.1 52.632 57 26 1 102 158 167 222 6.03e-15 72.4
Msa0571120 AT1G29860.1 54.167 72 33 0 89 160 123 194 5.02e-24 95.9
Msa0571120 AT2G47260.1 48.864 88 44 1 72 158 143 230 6.99e-24 96.7
Msa0571120 AT4G18170.1 56.522 69 30 0 92 160 162 230 9.06e-24 95.9
Msa0571120 AT5G46350.1 53.623 69 32 0 92 160 173 241 1.25e-22 92.8
Msa0571120 AT4G26440.1 47.170 106 53 1 64 166 331 436 1.34e-22 94.4
Msa0571120 AT4G26440.1 52.632 57 26 1 102 158 178 233 2.01e-16 76.6
Msa0571120 AT3G62340.1 56.338 71 31 0 89 159 105 175 4.84e-22 90.5
Msa0571120 AT4G04450.2 48.101 79 40 1 87 164 183 261 1.37e-21 91.3
Msa0571120 AT1G69310.3 48.750 80 37 1 79 158 124 199 2.00e-21 89.0
Msa0571120 AT4G04450.1 46.914 81 42 1 85 164 275 355 5.77e-21 89.7
Msa0571120 AT1G62300.1 43.333 90 50 1 72 160 282 371 3.17e-20 87.8
Msa0571120 AT2G04880.2 51.429 70 34 0 89 158 270 339 3.60e-20 87.4
Msa0571120 AT2G04880.2 56.667 60 25 1 100 159 109 167 1.51e-17 79.7
Msa0571120 AT2G04880.1 38.739 111 54 1 48 158 267 363 4.06e-20 87.4
Msa0571120 AT2G04880.1 56.667 60 25 1 100 159 109 167 1.79e-17 79.7
Msa0571120 AT4G22070.4 48.000 75 38 1 87 160 282 356 5.62e-20 87.0
Msa0571120 AT4G22070.3 48.000 75 38 1 87 160 282 356 5.62e-20 87.0
Msa0571120 AT4G22070.2 48.000 75 38 1 87 160 282 356 5.62e-20 87.0
Msa0571120 AT4G22070.1 48.000 75 38 1 87 160 282 356 5.62e-20 87.0
Msa0571120 AT4G01720.1 48.000 75 38 1 87 160 224 298 1.87e-19 85.5
Msa0571120 AT2G21900.1 49.315 73 34 1 90 159 94 166 1.98e-19 82.0
Msa0571120 AT2G37260.2 51.471 68 33 0 91 158 256 323 2.28e-19 84.3
Msa0571120 AT2G37260.2 55.357 56 24 1 103 158 84 138 6.09e-14 69.3
Msa0571120 AT2G37260.3 51.471 68 33 0 91 158 258 325 2.52e-19 84.3
Msa0571120 AT2G37260.3 55.357 56 24 1 103 158 86 140 6.14e-14 69.3
Msa0571120 AT1G55600.1 45.349 86 46 1 75 159 279 364 2.69e-19 85.1
Msa0571120 AT2G37260.1 51.471 68 33 0 91 158 338 405 3.07e-19 84.7
Msa0571120 AT2G37260.1 55.357 56 24 1 103 158 166 220 5.37e-14 69.7
Msa0571120 AT4G30935.1 44.211 95 51 1 70 162 299 393 8.77e-19 83.6
Msa0571120 AT5G15130.2 40.476 84 49 1 85 167 168 251 3.15e-18 82.0
Msa0571120 AT5G15130.1 41.975 81 46 1 85 164 210 290 4.80e-18 81.3
Msa0571120 AT1G68150.1 41.304 92 50 2 77 167 213 301 8.95e-18 80.1
Msa0571120 AT1G18860.1 42.857 77 43 1 85 160 222 298 1.46e-17 80.1
Msa0571120 AT1G80840.1 42.105 76 43 1 100 174 144 219 5.75e-17 77.4
Msa0571120 AT5G24110.1 50.847 59 26 1 101 156 112 170 1.97e-16 75.9
Msa0571120 AT4G31800.2 49.123 57 28 1 103 158 112 168 4.59e-16 73.9
Msa0571120 AT4G31800.1 49.123 57 28 1 103 158 177 233 7.57e-16 74.3
Msa0571120 AT3G01080.3 52.632 57 26 1 102 158 205 260 2.10e-15 73.2
Msa0571120 AT2G25000.2 47.368 57 29 1 103 158 104 160 5.25e-15 70.9
Msa0571120 AT2G25000.4 47.368 57 29 1 103 158 104 160 5.25e-15 70.9
Msa0571120 AT2G25000.3 47.368 57 29 1 103 158 126 182 6.65e-15 70.9
Msa0571120 AT5G43290.1 49.153 59 30 0 100 158 112 170 7.29e-15 71.2
Msa0571120 AT2G25000.1 47.368 57 29 1 103 158 147 203 1.07e-14 70.5
Msa0571120 AT4G11070.1 30.263 152 94 5 15 156 49 198 4.58e-14 69.3
Msa0571120 AT4G12020.10 53.448 58 26 1 101 158 467 523 6.26e-14 69.7
Msa0571120 AT4G12020.3 53.448 58 26 1 101 158 467 523 6.38e-14 69.7
Msa0571120 AT4G12020.4 53.448 58 26 1 101 158 467 523 6.45e-14 69.7
Msa0571120 AT4G12020.2 53.448 58 26 1 101 158 467 523 6.64e-14 69.7
Msa0571120 AT4G12020.7 53.448 58 26 1 101 158 467 523 6.80e-14 69.7
Msa0571120 AT4G12020.1 53.448 58 26 1 101 158 467 523 6.87e-14 69.7
Msa0571120 AT4G12020.9 53.448 58 26 1 101 158 467 523 6.87e-14 69.7
Msa0571120 AT4G12020.6 53.448 58 26 1 101 158 467 523 6.93e-14 69.7
Msa0571120 AT4G12020.8 53.448 58 26 1 101 158 467 523 6.93e-14 69.7
Msa0571120 AT4G12020.5 53.448 58 26 1 101 158 400 456 7.49e-14 69.7
Msa0571120 AT1G69810.2 46.970 66 33 2 101 164 144 209 7.63e-14 68.9
Msa0571120 AT1G69810.1 48.387 62 30 2 101 160 202 263 1.04e-13 68.6
Msa0571120 AT4G12020.11 53.448 58 26 1 101 158 467 523 1.08e-13 68.9
Msa0571120 AT4G11070.2 30.935 139 85 4 28 156 29 166 1.36e-13 67.8
Msa0571120 AT3G56400.1 31.429 140 86 3 42 171 59 198 3.12e-13 66.6
Msa0571120 AT4G23810.1 51.724 58 25 1 102 156 158 215 3.86e-13 66.6
Msa0571120 AT5G01900.1 41.333 75 41 1 96 167 104 178 5.78e-13 65.9
Msa0571120 AT4G31550.2 45.902 61 32 1 99 158 242 302 7.97e-13 65.9
Msa0571120 AT4G31550.1 45.902 61 32 1 99 158 243 303 8.01e-13 65.9
Msa0571120 AT2G24570.1 45.902 61 32 1 99 158 240 300 1.26e-12 65.5
Msa0571120 AT5G45260.1 35.955 89 50 3 98 181 1202 1288 1.36e-12 65.9
Msa0571120 AT4G24240.1 45.902 61 32 1 99 158 278 338 1.56e-12 65.1
Msa0571120 AT2G40750.1 36.957 92 46 3 90 169 135 226 1.66e-12 65.1
Msa0571120 AT2G30590.1 43.548 62 34 1 99 159 310 371 1.76e-12 65.1
Msa0571120 AT2G23320.1 42.623 61 34 1 99 158 237 297 4.13e-12 63.9
Msa0571120 AT5G52830.1 36.709 79 49 1 96 173 159 237 6.29e-12 63.5
Msa0571120 AT4G01250.1 36.842 76 46 2 86 160 113 187 1.02e-11 62.4
Msa0571120 AT1G30650.1 33.010 103 64 4 60 159 175 275 1.31e-11 62.8
Msa0571120 AT4G23550.1 35.616 73 46 1 87 158 125 197 1.51e-11 62.0
Msa0571120 AT1G66560.1 44.068 59 30 1 102 157 103 161 1.76e-11 61.6
Msa0571120 AT2G34830.1 36.620 71 43 2 91 159 203 273 3.16e-11 61.6
Msa0571120 AT2G40740.1 44.828 58 29 1 102 156 173 230 3.24e-11 61.2
Msa0571120 AT2G34830.2 36.620 71 43 2 91 159 212 282 3.58e-11 61.6
Msa0571120 AT1G29280.1 41.379 58 33 1 103 159 75 132 3.59e-11 60.8
Msa0571120 AT2G40740.3 44.828 58 29 1 102 156 182 239 3.60e-11 60.8
Msa0571120 AT5G28650.1 42.623 61 34 1 99 158 259 319 4.51e-11 60.8

Find 58 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTTCTTTGCCTCCTTTC+TGG 0.072162 4_1:-73630200 None:intergenic
TTGAAATTCATTGAATATTA+TGG 0.088685 4_1:+73629714 Msa0571120:five_prime_UTR
CTCCTCCAGTACATCGATTT+TGG 0.140480 4_1:+73629684 None:intergenic
TTAGTTGGTTTAACATTAAA+AGG 0.235904 4_1:-73630117 None:intergenic
TATGCATGTGTCGTATATAA+TGG 0.254604 4_1:-73629993 None:intergenic
TTCCACGACCTGCTCATCTT+TGG 0.291905 4_1:-73630812 None:intergenic
TGAAATTCATTGAATATTAT+GGG 0.294072 4_1:+73629715 Msa0571120:five_prime_UTR
GCTCATCTTTGGAGTGCCTT+TGG 0.299734 4_1:-73630801 None:intergenic
GGTTTCCGGTGGAGAAAGTA+TGG 0.301787 4_1:+73630276 Msa0571120:CDS
ATATACTAGATGATGGTTTC+CGG 0.316230 4_1:+73630262 Msa0571120:CDS
GCATATGGTGAAGATGAGAT+AGG 0.329659 4_1:-73630090 None:intergenic
CTTTCAGCTGATTTCTCTAC+AGG 0.351397 4_1:-73630862 None:intergenic
TTTAATGTTAAACCAACTAA+TGG 0.357254 4_1:+73630120 Msa0571120:CDS
TAAAATTGAAACTACTATAA+TGG 0.364418 4_1:+73629771 Msa0571120:five_prime_UTR
GTTGCGAAATGGTTCGGATT+CGG 0.377695 4_1:+73631069 Msa0571120:three_prime_UTR
TCAAGAAAATAAATAAACTA+TGG 0.398587 4_1:-73629799 None:intergenic
CCATAACCATAAAAGTGAAT+TGG 0.401493 4_1:-73630997 None:intergenic
ATGCATGTGTCGTATATAAT+GGG 0.406992 4_1:-73629992 None:intergenic
TTCACATGATTTAGTTAAGC+AGG 0.411866 4_1:-73630974 None:intergenic
TAAATCCAAAATCGATGTAC+TGG 0.419447 4_1:-73629689 None:intergenic
GGTTCTAAGATCAAATGGTT+TGG 0.427691 4_1:-73631028 None:intergenic
TGAATATTAGAGCCATTAGT+TGG 0.435523 4_1:-73630132 None:intergenic
TAATGAAGTTTCTCAAGATC+TGG 0.441173 4_1:-73630891 None:intergenic
ACATTAAAAGGTGAAGCATA+TGG 0.441902 4_1:-73630105 None:intergenic
AACCACTTCTCACAACAAAC+TGG 0.443186 4_1:-73631049 None:intergenic
AAACTGGTTCTAAGATCAAA+TGG 0.454910 4_1:-73631033 None:intergenic
AACACTTCATGTTTCGCCAT+TGG 0.472496 4_1:-73630063 None:intergenic
CATATGGTGAAGATGAGATA+GGG 0.480605 4_1:-73630089 None:intergenic
GAAGTGGTTGCGAAATGGTT+CGG 0.491170 4_1:+73631063 Msa0571120:three_prime_UTR
CAGATTGATATACTAGATGA+TGG 0.495665 4_1:+73630255 Msa0571120:CDS
TACTACAAATGCACTTATGA+AGG 0.510375 4_1:+73630757 Msa0571120:CDS
TCTTATTACTTCAAAACCAA+TGG 0.511231 4_1:+73630047 Msa0571120:CDS
TATTTAAAATAATGTTACAT+TGG 0.512653 4_1:-73630940 None:intergenic
CTCCAAAGATGAGCAGGTCG+TGG 0.520505 4_1:+73630810 Msa0571120:CDS
GAAACATGTGGGCGGCAAGA+AGG 0.521155 4_1:-73629928 None:intergenic
TTTCCCCATACTTTCTCCAC+CGG 0.530517 4_1:-73630281 None:intergenic
AAGGAGACTTCAAGCCAGAA+AGG 0.533731 4_1:+73630186 Msa0571120:CDS
TGTGAGAAGTGGTTGCGAAA+TGG 0.540802 4_1:+73631058 Msa0571120:three_prime_UTR
GTCGTGGAAACAACTTATGA+AGG 0.541326 4_1:+73630826 Msa0571120:CDS
AAGGCACTCCAAAGATGAGC+AGG 0.544902 4_1:+73630804 Msa0571120:CDS
AACCAGTTTGTTGTGAGAAG+TGG 0.546810 4_1:+73631047 Msa0571120:three_prime_UTR
GAGAAAGTATGGGGAAAAGA+TGG 0.549845 4_1:+73630287 Msa0571120:CDS
TGAACTTCATGCGTGAAACA+TGG 0.562698 4_1:-73629848 None:intergenic
ATCCAAAATCGATGTACTGG+AGG 0.586139 4_1:-73629686 None:intergenic
GGCAAGAAGGTCACTATGTG+TGG 0.594674 4_1:-73629915 None:intergenic
GTTTCCGGTGGAGAAAGTAT+GGG 0.605222 4_1:+73630277 Msa0571120:CDS
TGAAAGACAACAAATTCCCT+AGG 0.608578 4_1:+73630310 Msa0571120:CDS
TAAGGAGATGATGAAACATG+TGG 0.619264 4_1:-73629940 None:intergenic
TCGTGGAAACAACTTATGAA+GGG 0.629334 4_1:+73630827 Msa0571120:CDS
TACTAGATGATGGTTTCCGG+TGG 0.631774 4_1:+73630265 Msa0571120:CDS
TTTCAGCTGATTTCTCTACA+GGG 0.636510 4_1:-73630861 None:intergenic
ATGCACTTATGAAGGCTGCA+AGG 0.637608 4_1:+73630765 Msa0571120:CDS
GAGACTTCAAGCCAGAAAGG+AGG 0.650325 4_1:+73630189 Msa0571120:CDS
AGGTAAAGAAACAAATCCAA+AGG 0.652137 4_1:+73630785 Msa0571120:CDS
TTTCCGGTGGAGAAAGTATG+GGG 0.671158 4_1:+73630278 Msa0571120:CDS
AAGGAGATGATGAAACATGT+GGG 0.673240 4_1:-73629939 None:intergenic
ACAAATATGTATTTCAAACG+AGG 0.693150 4_1:+73630229 Msa0571120:CDS
GAGATGATGAAACATGTGGG+CGG 0.727471 4_1:-73629936 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTAAAATAATGTTACAT+TGG - chr4_1:73630943-73630962 None:intergenic 10.0%
!!! TGTAACATTATTTTAAATAT+TGG + chr4_1:73630944-73630963 Msa0571120:exon 10.0%
!!! TATTTAAAATAATGTTACAT+TGG - chr4_1:73630943-73630962 None:intergenic 10.0%
!!! TGTAACATTATTTTAAATAT+TGG + chr4_1:73630944-73630963 Msa0571120:exon 10.0%
!! TTGAAATTCATTGAATATTA+TGG + chr4_1:73629714-73629733 Msa0571120:five_prime_UTR 15.0%
!! TGAAATTCATTGAATATTAT+GGG + chr4_1:73629715-73629734 Msa0571120:five_prime_UTR 15.0%
!! TAAAATTGAAACTACTATAA+TGG + chr4_1:73629771-73629790 Msa0571120:five_prime_UTR 15.0%
!! TCAAGAAAATAAATAAACTA+TGG - chr4_1:73629802-73629821 None:intergenic 15.0%
!! AGAATATCTAAAAACTAAAA+AGG + chr4_1:73630167-73630186 Msa0571120:CDS 15.0%
!! TTGAAATTCATTGAATATTA+TGG + chr4_1:73629714-73629733 Msa0571120:five_prime_UTR 15.0%
!! TGAAATTCATTGAATATTAT+GGG + chr4_1:73629715-73629734 Msa0571120:five_prime_UTR 15.0%
!! TAAAATTGAAACTACTATAA+TGG + chr4_1:73629771-73629790 Msa0571120:five_prime_UTR 15.0%
!! TCAAGAAAATAAATAAACTA+TGG - chr4_1:73629802-73629821 None:intergenic 15.0%
!! AGAATATCTAAAAACTAAAA+AGG + chr4_1:73630167-73630186 Msa0571120:CDS 15.0%
!!! TTAGTTGGTTTAACATTAAA+AGG - chr4_1:73630120-73630139 None:intergenic 20.0%
!! TTTAATGTTAAACCAACTAA+TGG + chr4_1:73630120-73630139 Msa0571120:CDS 20.0%
!! TTTCTAGATAGAATAATTCT+TGG - chr4_1:73630447-73630466 None:intergenic 20.0%
!!! TTAGTTGGTTTAACATTAAA+AGG - chr4_1:73630120-73630139 None:intergenic 20.0%
!! TTTAATGTTAAACCAACTAA+TGG + chr4_1:73630120-73630139 Msa0571120:CDS 20.0%
!! TTTCTAGATAGAATAATTCT+TGG - chr4_1:73630447-73630466 None:intergenic 20.0%
!!! TGGTTTTGAAGTAATAAGAA+AGG - chr4_1:73630046-73630065 None:intergenic 25.0%
! TCTTATTACTTCAAAACCAA+TGG + chr4_1:73630047-73630066 Msa0571120:CDS 25.0%
! ACAAATATGTATTTCAAACG+AGG + chr4_1:73630229-73630248 Msa0571120:CDS 25.0%
!!! TATTTTTTGTGTTAACTCTC+CGG + chr4_1:73630361-73630380 Msa0571120:intron 25.0%
! ACAAAAATTAAACAAGGTCA+GGG - chr4_1:73630709-73630728 None:intergenic 25.0%
! AACAAAAATTAAACAAGGTC+AGG - chr4_1:73630710-73630729 None:intergenic 25.0%
! GTTGGAACAAAAATTAAACA+AGG - chr4_1:73630715-73630734 None:intergenic 25.0%
!!! TGGTTTTGAAGTAATAAGAA+AGG - chr4_1:73630046-73630065 None:intergenic 25.0%
! TCTTATTACTTCAAAACCAA+TGG + chr4_1:73630047-73630066 Msa0571120:CDS 25.0%
! ACAAATATGTATTTCAAACG+AGG + chr4_1:73630229-73630248 Msa0571120:CDS 25.0%
!!! TATTTTTTGTGTTAACTCTC+CGG + chr4_1:73630361-73630380 Msa0571120:intron 25.0%
! ACAAAAATTAAACAAGGTCA+GGG - chr4_1:73630709-73630728 None:intergenic 25.0%
! AACAAAAATTAAACAAGGTC+AGG - chr4_1:73630710-73630729 None:intergenic 25.0%
! GTTGGAACAAAAATTAAACA+AGG - chr4_1:73630715-73630734 None:intergenic 25.0%
TAAATCCAAAATCGATGTAC+TGG - chr4_1:73629692-73629711 None:intergenic 30.0%
! ATAATGGGAAAAAAGGATGT+CGG - chr4_1:73629980-73629999 None:intergenic 30.0%
! GTCGTATATAATGGGAAAAA+AGG - chr4_1:73629987-73630006 None:intergenic 30.0%
ATGCATGTGTCGTATATAAT+GGG - chr4_1:73629995-73630014 None:intergenic 30.0%
TATGCATGTGTCGTATATAA+TGG - chr4_1:73629996-73630015 None:intergenic 30.0%
! TACGACACATGCATAATTTT+TGG + chr4_1:73630001-73630020 Msa0571120:CDS 30.0%
ACATTAAAAGGTGAAGCATA+TGG - chr4_1:73630108-73630127 None:intergenic 30.0%
TGAATATTAGAGCCATTAGT+TGG - chr4_1:73630135-73630154 None:intergenic 30.0%
CAGATTGATATACTAGATGA+TGG + chr4_1:73630255-73630274 Msa0571120:CDS 30.0%
! ATATACTAGATGATGGTTTC+CGG + chr4_1:73630262-73630281 Msa0571120:CDS 30.0%
TAAATAATGAGACGAACCTA+GGG - chr4_1:73630329-73630348 None:intergenic 30.0%
TTAAATAATGAGACGAACCT+AGG - chr4_1:73630330-73630349 None:intergenic 30.0%
ACCATTTGAACTCAATTGTT+TGG + chr4_1:73630514-73630533 Msa0571120:intron 30.0%
ACCAAACAATTGAGTTCAAA+TGG - chr4_1:73630518-73630537 None:intergenic 30.0%
CTGTAAGCAGAAAATAATGT+TGG - chr4_1:73630733-73630752 None:intergenic 30.0%
TACTACAAATGCACTTATGA+AGG + chr4_1:73630757-73630776 Msa0571120:CDS 30.0%
AGGTAAAGAAACAAATCCAA+AGG + chr4_1:73630785-73630804 Msa0571120:CDS 30.0%
TAATGAAGTTTCTCAAGATC+TGG - chr4_1:73630894-73630913 None:intergenic 30.0%
TTCACATGATTTAGTTAAGC+AGG - chr4_1:73630977-73630996 None:intergenic 30.0%
!! TGTGAACCAATTCACTTTTA+TGG + chr4_1:73630991-73631010 Msa0571120:three_prime_UTR 30.0%
CCATAACCATAAAAGTGAAT+TGG - chr4_1:73631000-73631019 None:intergenic 30.0%
!! CCAATTCACTTTTATGGTTA+TGG + chr4_1:73630997-73631016 Msa0571120:three_prime_UTR 30.0%
!! AAACTGGTTCTAAGATCAAA+TGG - chr4_1:73631036-73631055 None:intergenic 30.0%
TAAATCCAAAATCGATGTAC+TGG - chr4_1:73629692-73629711 None:intergenic 30.0%
! ATAATGGGAAAAAAGGATGT+CGG - chr4_1:73629980-73629999 None:intergenic 30.0%
! GTCGTATATAATGGGAAAAA+AGG - chr4_1:73629987-73630006 None:intergenic 30.0%
ATGCATGTGTCGTATATAAT+GGG - chr4_1:73629995-73630014 None:intergenic 30.0%
TATGCATGTGTCGTATATAA+TGG - chr4_1:73629996-73630015 None:intergenic 30.0%
! TACGACACATGCATAATTTT+TGG + chr4_1:73630001-73630020 Msa0571120:CDS 30.0%
ACATTAAAAGGTGAAGCATA+TGG - chr4_1:73630108-73630127 None:intergenic 30.0%
TGAATATTAGAGCCATTAGT+TGG - chr4_1:73630135-73630154 None:intergenic 30.0%
CAGATTGATATACTAGATGA+TGG + chr4_1:73630255-73630274 Msa0571120:CDS 30.0%
! ATATACTAGATGATGGTTTC+CGG + chr4_1:73630262-73630281 Msa0571120:CDS 30.0%
TAAATAATGAGACGAACCTA+GGG - chr4_1:73630329-73630348 None:intergenic 30.0%
TTAAATAATGAGACGAACCT+AGG - chr4_1:73630330-73630349 None:intergenic 30.0%
ACCATTTGAACTCAATTGTT+TGG + chr4_1:73630514-73630533 Msa0571120:intron 30.0%
ACCAAACAATTGAGTTCAAA+TGG - chr4_1:73630518-73630537 None:intergenic 30.0%
CTGTAAGCAGAAAATAATGT+TGG - chr4_1:73630733-73630752 None:intergenic 30.0%
TACTACAAATGCACTTATGA+AGG + chr4_1:73630757-73630776 Msa0571120:CDS 30.0%
AGGTAAAGAAACAAATCCAA+AGG + chr4_1:73630785-73630804 Msa0571120:CDS 30.0%
TAATGAAGTTTCTCAAGATC+TGG - chr4_1:73630894-73630913 None:intergenic 30.0%
TTCACATGATTTAGTTAAGC+AGG - chr4_1:73630977-73630996 None:intergenic 30.0%
!! TGTGAACCAATTCACTTTTA+TGG + chr4_1:73630991-73631010 Msa0571120:three_prime_UTR 30.0%
CCATAACCATAAAAGTGAAT+TGG - chr4_1:73631000-73631019 None:intergenic 30.0%
!! CCAATTCACTTTTATGGTTA+TGG + chr4_1:73630997-73631016 Msa0571120:three_prime_UTR 30.0%
!! AAACTGGTTCTAAGATCAAA+TGG - chr4_1:73631036-73631055 None:intergenic 30.0%
AAGGAGATGATGAAACATGT+GGG - chr4_1:73629942-73629961 None:intergenic 35.0%
TAAGGAGATGATGAAACATG+TGG - chr4_1:73629943-73629962 None:intergenic 35.0%
CATATGGTGAAGATGAGATA+GGG - chr4_1:73630092-73630111 None:intergenic 35.0%
! TTATTTCTTTGCCTCCTTTC+TGG - chr4_1:73630203-73630222 None:intergenic 35.0%
TGAAAGACAACAAATTCCCT+AGG + chr4_1:73630310-73630329 Msa0571120:CDS 35.0%
TCGTGGAAACAACTTATGAA+GGG + chr4_1:73630827-73630846 Msa0571120:CDS 35.0%
! TTTCAGCTGATTTCTCTACA+GGG - chr4_1:73630864-73630883 None:intergenic 35.0%
!! GGTTCTAAGATCAAATGGTT+TGG - chr4_1:73631031-73631050 None:intergenic 35.0%
AAGGAGATGATGAAACATGT+GGG - chr4_1:73629942-73629961 None:intergenic 35.0%
TAAGGAGATGATGAAACATG+TGG - chr4_1:73629943-73629962 None:intergenic 35.0%
CATATGGTGAAGATGAGATA+GGG - chr4_1:73630092-73630111 None:intergenic 35.0%
! TTATTTCTTTGCCTCCTTTC+TGG - chr4_1:73630203-73630222 None:intergenic 35.0%
TGAAAGACAACAAATTCCCT+AGG + chr4_1:73630310-73630329 Msa0571120:CDS 35.0%
TCGTGGAAACAACTTATGAA+GGG + chr4_1:73630827-73630846 Msa0571120:CDS 35.0%
! TTTCAGCTGATTTCTCTACA+GGG - chr4_1:73630864-73630883 None:intergenic 35.0%
!! GGTTCTAAGATCAAATGGTT+TGG - chr4_1:73631031-73631050 None:intergenic 35.0%
TGAACTTCATGCGTGAAACA+TGG - chr4_1:73629851-73629870 None:intergenic 40.0%
! TCGGATGCATGCATTTTCTA+AGG - chr4_1:73629961-73629980 None:intergenic 40.0%
AACACTTCATGTTTCGCCAT+TGG - chr4_1:73630066-73630085 None:intergenic 40.0%
GCATATGGTGAAGATGAGAT+AGG - chr4_1:73630093-73630112 None:intergenic 40.0%
! GAGAAAGTATGGGGAAAAGA+TGG + chr4_1:73630287-73630306 Msa0571120:CDS 40.0%
! GCCAAGAGATAAGATTAGTC+TGG + chr4_1:73630421-73630440 Msa0571120:intron 40.0%
GCCAGACTAATCTTATCTCT+TGG - chr4_1:73630425-73630444 None:intergenic 40.0%
GTCGTGGAAACAACTTATGA+AGG + chr4_1:73630826-73630845 Msa0571120:CDS 40.0%
! CTTTCAGCTGATTTCTCTAC+AGG - chr4_1:73630865-73630884 None:intergenic 40.0%
!! AACCAGTTTGTTGTGAGAAG+TGG + chr4_1:73631047-73631066 Msa0571120:three_prime_UTR 40.0%
AACCACTTCTCACAACAAAC+TGG - chr4_1:73631052-73631071 None:intergenic 40.0%
TGAACTTCATGCGTGAAACA+TGG - chr4_1:73629851-73629870 None:intergenic 40.0%
! TCGGATGCATGCATTTTCTA+AGG - chr4_1:73629961-73629980 None:intergenic 40.0%
AACACTTCATGTTTCGCCAT+TGG - chr4_1:73630066-73630085 None:intergenic 40.0%
GCATATGGTGAAGATGAGAT+AGG - chr4_1:73630093-73630112 None:intergenic 40.0%
! GAGAAAGTATGGGGAAAAGA+TGG + chr4_1:73630287-73630306 Msa0571120:CDS 40.0%
! GCCAAGAGATAAGATTAGTC+TGG + chr4_1:73630421-73630440 Msa0571120:intron 40.0%
GCCAGACTAATCTTATCTCT+TGG - chr4_1:73630425-73630444 None:intergenic 40.0%
GTCGTGGAAACAACTTATGA+AGG + chr4_1:73630826-73630845 Msa0571120:CDS 40.0%
! CTTTCAGCTGATTTCTCTAC+AGG - chr4_1:73630865-73630884 None:intergenic 40.0%
!! AACCAGTTTGTTGTGAGAAG+TGG + chr4_1:73631047-73631066 Msa0571120:three_prime_UTR 40.0%
AACCACTTCTCACAACAAAC+TGG - chr4_1:73631052-73631071 None:intergenic 40.0%
GAGATGATGAAACATGTGGG+CGG - chr4_1:73629939-73629958 None:intergenic 45.0%
AAGGAGACTTCAAGCCAGAA+AGG + chr4_1:73630186-73630205 Msa0571120:CDS 45.0%
! TACTAGATGATGGTTTCCGG+TGG + chr4_1:73630265-73630284 Msa0571120:CDS 45.0%
! GTTTCCGGTGGAGAAAGTAT+GGG + chr4_1:73630277-73630296 Msa0571120:CDS 45.0%
! TTTCCGGTGGAGAAAGTATG+GGG + chr4_1:73630278-73630297 Msa0571120:CDS 45.0%
TTTCCCCATACTTTCTCCAC+CGG - chr4_1:73630284-73630303 None:intergenic 45.0%
! TGTTAACTCTCCGGTTCTGA+GGG + chr4_1:73630370-73630389 Msa0571120:intron 45.0%
TGGCCGAACTCCAGATTATT+GGG - chr4_1:73630405-73630424 None:intergenic 45.0%
TTGGCCGAACTCCAGATTAT+TGG - chr4_1:73630406-73630425 None:intergenic 45.0%
ATGCACTTATGAAGGCTGCA+AGG + chr4_1:73630765-73630784 Msa0571120:CDS 45.0%
TGTGAGAAGTGGTTGCGAAA+TGG + chr4_1:73631058-73631077 Msa0571120:three_prime_UTR 45.0%
GAAGTGGTTGCGAAATGGTT+CGG + chr4_1:73631063-73631082 Msa0571120:three_prime_UTR 45.0%
! GTTGCGAAATGGTTCGGATT+CGG + chr4_1:73631069-73631088 Msa0571120:three_prime_UTR 45.0%
GAGATGATGAAACATGTGGG+CGG - chr4_1:73629939-73629958 None:intergenic 45.0%
AAGGAGACTTCAAGCCAGAA+AGG + chr4_1:73630186-73630205 Msa0571120:CDS 45.0%
! TACTAGATGATGGTTTCCGG+TGG + chr4_1:73630265-73630284 Msa0571120:CDS 45.0%
! GTTTCCGGTGGAGAAAGTAT+GGG + chr4_1:73630277-73630296 Msa0571120:CDS 45.0%
! TTTCCGGTGGAGAAAGTATG+GGG + chr4_1:73630278-73630297 Msa0571120:CDS 45.0%
TTTCCCCATACTTTCTCCAC+CGG - chr4_1:73630284-73630303 None:intergenic 45.0%
! TGTTAACTCTCCGGTTCTGA+GGG + chr4_1:73630370-73630389 Msa0571120:intron 45.0%
TGGCCGAACTCCAGATTATT+GGG - chr4_1:73630405-73630424 None:intergenic 45.0%
TTGGCCGAACTCCAGATTAT+TGG - chr4_1:73630406-73630425 None:intergenic 45.0%
ATGCACTTATGAAGGCTGCA+AGG + chr4_1:73630765-73630784 Msa0571120:CDS 45.0%
TGTGAGAAGTGGTTGCGAAA+TGG + chr4_1:73631058-73631077 Msa0571120:three_prime_UTR 45.0%
GAAGTGGTTGCGAAATGGTT+CGG + chr4_1:73631063-73631082 Msa0571120:three_prime_UTR 45.0%
! GTTGCGAAATGGTTCGGATT+CGG + chr4_1:73631069-73631088 Msa0571120:three_prime_UTR 45.0%
GGCAAGAAGGTCACTATGTG+TGG - chr4_1:73629918-73629937 None:intergenic 50.0%
GAGACTTCAAGCCAGAAAGG+AGG + chr4_1:73630189-73630208 Msa0571120:CDS 50.0%
GGTTTCCGGTGGAGAAAGTA+TGG + chr4_1:73630276-73630295 Msa0571120:CDS 50.0%
GTGTTAACTCTCCGGTTCTG+AGG + chr4_1:73630369-73630388 Msa0571120:intron 50.0%
! GCCCCCAATAATCTGGAGTT+CGG + chr4_1:73630399-73630418 Msa0571120:intron 50.0%
GCCGAACTCCAGATTATTGG+GGG - chr4_1:73630403-73630422 None:intergenic 50.0%
GGCCGAACTCCAGATTATTG+GGG - chr4_1:73630404-73630423 None:intergenic 50.0%
!! GCTCATCTTTGGAGTGCCTT+TGG - chr4_1:73630804-73630823 None:intergenic 50.0%
! AAGGCACTCCAAAGATGAGC+AGG + chr4_1:73630804-73630823 Msa0571120:CDS 50.0%
TTCCACGACCTGCTCATCTT+TGG - chr4_1:73630815-73630834 None:intergenic 50.0%
GGCAAGAAGGTCACTATGTG+TGG - chr4_1:73629918-73629937 None:intergenic 50.0%
GAGACTTCAAGCCAGAAAGG+AGG + chr4_1:73630189-73630208 Msa0571120:CDS 50.0%
GGTTTCCGGTGGAGAAAGTA+TGG + chr4_1:73630276-73630295 Msa0571120:CDS 50.0%
GTGTTAACTCTCCGGTTCTG+AGG + chr4_1:73630369-73630388 Msa0571120:intron 50.0%
! GCCCCCAATAATCTGGAGTT+CGG + chr4_1:73630399-73630418 Msa0571120:intron 50.0%
GCCGAACTCCAGATTATTGG+GGG - chr4_1:73630403-73630422 None:intergenic 50.0%
GGCCGAACTCCAGATTATTG+GGG - chr4_1:73630404-73630423 None:intergenic 50.0%
!! GCTCATCTTTGGAGTGCCTT+TGG - chr4_1:73630804-73630823 None:intergenic 50.0%
! AAGGCACTCCAAAGATGAGC+AGG + chr4_1:73630804-73630823 Msa0571120:CDS 50.0%
TTCCACGACCTGCTCATCTT+TGG - chr4_1:73630815-73630834 None:intergenic 50.0%
GAAACATGTGGGCGGCAAGA+AGG - chr4_1:73629931-73629950 None:intergenic 55.0%
!! ACTCTCCGGTTCTGAGGGAA+AGG + chr4_1:73630375-73630394 Msa0571120:intron 55.0%
!! CTCTCCGGTTCTGAGGGAAA+GGG + chr4_1:73630376-73630395 Msa0571120:intron 55.0%
!! TCTCCGGTTCTGAGGGAAAG+GGG + chr4_1:73630377-73630396 Msa0571120:intron 55.0%
GAAAGGGGCCCCCAATAATC+TGG + chr4_1:73630392-73630411 Msa0571120:intron 55.0%
CTCCAAAGATGAGCAGGTCG+TGG + chr4_1:73630810-73630829 Msa0571120:CDS 55.0%
GAAACATGTGGGCGGCAAGA+AGG - chr4_1:73629931-73629950 None:intergenic 55.0%
!! ACTCTCCGGTTCTGAGGGAA+AGG + chr4_1:73630375-73630394 Msa0571120:intron 55.0%
!! CTCTCCGGTTCTGAGGGAAA+GGG + chr4_1:73630376-73630395 Msa0571120:intron 55.0%
!! TCTCCGGTTCTGAGGGAAAG+GGG + chr4_1:73630377-73630396 Msa0571120:intron 55.0%
GAAAGGGGCCCCCAATAATC+TGG + chr4_1:73630392-73630411 Msa0571120:intron 55.0%
CTCCAAAGATGAGCAGGTCG+TGG + chr4_1:73630810-73630829 Msa0571120:CDS 55.0%
GGGCCCCTTTCCCTCAGAAC+CGG - chr4_1:73630383-73630402 None:intergenic 65.0%
GGGCCCCTTTCCCTCAGAAC+CGG - chr4_1:73630383-73630402 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 73629687 73631141 73629687 ID=Msa0571120;Name=Msa0571120
chr4_1 mRNA 73629687 73631141 73629687 ID=Msa0571120-mRNA-1;Parent=Msa0571120;Name=Msa0571120-mRNA-1;_AED=0.00;_eAED=0.00;_QI=280|1|1|1|1|1|2|193|186
chr4_1 exon 73629687 73630331 73629687 ID=Msa0571120-mRNA-1:exon:25258;Parent=Msa0571120-mRNA-1
chr4_1 exon 73630753 73631141 73630753 ID=Msa0571120-mRNA-1:exon:25259;Parent=Msa0571120-mRNA-1
chr4_1 five_prime_UTR 73629687 73629966 73629687 ID=Msa0571120-mRNA-1:five_prime_utr;Parent=Msa0571120-mRNA-1
chr4_1 CDS 73629967 73630331 73629967 ID=Msa0571120-mRNA-1:cds;Parent=Msa0571120-mRNA-1
chr4_1 CDS 73630753 73630948 73630753 ID=Msa0571120-mRNA-1:cds;Parent=Msa0571120-mRNA-1
chr4_1 three_prime_UTR 73630949 73631141 73630949 ID=Msa0571120-mRNA-1:three_prime_utr;Parent=Msa0571120-mRNA-1
Gene Sequence

>Msa0571120

ATGCATGCATCCGACATCCTTTTTTCCCATTATATACGACACATGCATAATTTTTGGTATAGTCTTTTACGTACTACCTTTCTTATTACTTCAAAACCAATGGCGAAACATGAAGTGTTACTCCCTATCTCATCTTCACCATATGCTTCACCTTTTAATGTTAAACCAACTAATGGCTCTAATATTCATGTTAAAAAAGCAGAATATCTAAAAACTAAAAAGGAGACTTCAAGCCAGAAAGGAGGCAAAGAAATAATGAAGCACAAATATGTATTTCAAACGAGGAGTCAGATTGATATACTAGATGATGGTTTCCGGTGGAGAAAGTATGGGGAAAAGATGGTGAAAGACAACAAATTCCCTAGAAGTTACTACAAATGCACTTATGAAGGCTGCAAGGTAAAGAAACAAATCCAAAGGCACTCCAAAGATGAGCAGGTCGTGGAAACAACTTATGAAGGGATGCATATTCACCCTGTAGAGAAATCAGCTGAAAGCTTCGACCAGATCTTGAGAAACTTCATTACTAACAATCAACTATGTAATGTAACTCCAATGTAA
Protein sequence

>Msa0571120

MHASDILFSHYIRHMHNFWYSLLRTTFLITSKPMAKHEVLLPISSSPYASPFNVKPTNGSNIHVKKAEYLKTKKETSSQKGGKEIMKHKYVFQTRSQIDILDDGFRWRKYGEKMVKDNKFPRSYYKCTYEGCKVKKQIQRHSKDEQVVETTYEGMHIHPVEKSAESFDQILRNFITNNQLCNVTPM*