AlfalfaGEDB | Msa1358320

M. sativa cultivar zhongmu-4 / Msa1358320

KEGG: -
GO: GO:0000122 GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010015 GO:0010053 GO:0010055 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0022622 GO:0030154 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032101 GO:0032104 GO:0032107 GO:0032501 GO:0032502 GO:0033554 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043620 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048364 GO:0048519 GO:0048523 GO:0048527 GO:0048528 GO:0048583 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0090558 GO:0090627 GO:0090696 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:1990837 GO:2000112 GO:2000113 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1358320	XP_039684773.1	93.923	181	10	1	1	180	1	181	7.23e-120	347

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1358320	sp\|Q9FYA2\|WRK75_ARATH	70.238	84	25	0	88	171	53	136	6.90e-41	138

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1358320	A0A396GUX8	93.923	181	10	1	1	180	1	181	3.46e-120	347

TFs/TRs:

Gene ID	Type	Classification
Msa1358320	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0620220	Msa1358320	0.896347	4.025544e-76	-8.615850e-47
Msa0571120	Msa1358320	0.809112	2.222944e-50	-8.615850e-47
Msa0880460	Msa1358320	0.994713	1.466069e-209	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1358320	MtrunA17_Chr8g0386241	93.923	181	10	1	1	180	1	181	6.65e-124	347
Msa1358320	MtrunA17_Chr7g0224801	70.732	82	24	0	90	171	81	162	1.30e-41	137
Msa1358320	MtrunA17_Chr7g0248721	54.369	103	43	2	73	172	109	210	1.15e-30	111
Msa1358320	MtrunA17_Chr1g0150801	54.217	83	38	0	77	159	77	159	6.04e-29	105
Msa1358320	MtrunA17_Chr7g0218081	54.762	84	38	0	83	166	391	474	2.09e-27	107
Msa1358320	MtrunA17_Chr7g0218081	52.632	57	26	1	102	158	228	283	1.32e-15	73.9
Msa1358320	MtrunA17_Chr5g0418191	49.451	91	46	0	83	173	301	391	7.86e-27	105
Msa1358320	MtrunA17_Chr5g0418191	45.570	79	41	2	102	179	151	228	3.35e-14	69.7
Msa1358320	MtrunA17_Chr8g0335811	46.535	101	53	1	75	174	127	227	1.05e-26	101
Msa1358320	MtrunA17_Chr5g0445311	55.952	84	37	0	83	166	345	428	2.15e-26	104
Msa1358320	MtrunA17_Chr5g0445311	56.897	58	24	1	102	159	200	256	1.26e-16	77.0
Msa1358320	MtrunA17_Chr2g0294231	57.746	71	30	0	89	159	190	260	2.20e-26	103
Msa1358320	MtrunA17_Chr3g0106491	57.500	80	34	0	81	160	344	423	2.74e-26	104
Msa1358320	MtrunA17_Chr3g0106491	40.909	110	58	3	54	159	148	254	6.09e-19	83.6
Msa1358320	MtrunA17_Chr4g0004911	47.706	109	57	0	78	186	312	420	3.30e-26	103
Msa1358320	MtrunA17_Chr4g0004911	49.231	65	33	0	95	159	177	241	9.63e-16	74.3
Msa1358320	MtrunA17_Chr5g0418781	52.439	82	39	0	77	158	99	180	6.06e-26	100
Msa1358320	MtrunA17_Chr3g0101131	57.692	78	33	0	83	160	396	473	1.03e-25	103
Msa1358320	MtrunA17_Chr3g0101131	53.030	66	30	1	102	167	243	307	1.22e-17	79.7
Msa1358320	MtrunA17_Chr4g0042831	55.128	78	35	0	83	160	259	336	1.44e-25	101
Msa1358320	MtrunA17_Chr4g0042831	54.386	57	26	0	102	158	145	201	7.58e-16	74.3
Msa1358320	MtrunA17_Chr1g0194481	48.889	90	45	1	71	159	126	215	2.46e-25	99.8
Msa1358320	MtrunA17_Chr4g0051881	45.918	98	51	1	89	186	165	260	2.66e-25	99.8
Msa1358320	MtrunA17_Chr5g0432161	54.762	84	38	0	77	160	396	479	2.70e-25	102
Msa1358320	MtrunA17_Chr5g0432161	56.897	58	24	1	102	159	244	300	2.77e-16	75.9
Msa1358320	MtrunA17_Chr7g0243891	48.000	100	49	2	83	180	355	453	3.22e-25	101
Msa1358320	MtrunA17_Chr7g0243891	40.000	85	50	1	102	186	216	299	6.40e-15	72.0
Msa1358320	MtrunA17_Chr3g0129361	47.312	93	47	2	85	175	127	219	9.77e-25	95.9
Msa1358320	MtrunA17_Chr3g0079691	48.544	103	51	1	66	166	457	559	1.04e-24	100
Msa1358320	MtrunA17_Chr3g0079691	37.069	116	60	5	53	159	225	336	9.94e-16	74.3
Msa1358320	MtrunA17_Chr7g0270191	36.196	163	85	4	13	159	43	202	1.08e-24	97.4
Msa1358320	MtrunA17_Chr8g0383351	44.565	92	50	1	85	175	142	233	1.11e-24	96.3
Msa1358320	MtrunA17_Chr4g0068541	57.143	70	30	0	89	158	195	264	1.42e-24	99.0
Msa1358320	MtrunA17_Chr7g0249311	47.115	104	53	2	83	185	373	475	9.89e-24	97.4
Msa1358320	MtrunA17_Chr7g0249311	35.484	155	67	6	39	182	130	262	7.18e-16	74.7
Msa1358320	MtrunA17_Chr3g0129321	52.857	70	33	0	89	158	105	174	2.49e-23	92.0
Msa1358320	MtrunA17_Chr7g0249301	52.564	78	37	0	83	160	273	350	8.65e-23	93.6
Msa1358320	MtrunA17_Chr7g0249301	39.773	88	47	2	101	183	61	147	4.42e-14	69.3
Msa1358320	MtrunA17_Chr5g0443131	54.286	70	32	0	89	158	144	213	1.97e-22	91.7
Msa1358320	MtrunA17_Chr7g0270831	45.122	82	44	1	87	167	201	282	2.19e-21	90.1
Msa1358320	MtrunA17_Chr8g0383251	37.398	123	66	2	38	160	55	166	2.52e-21	86.3
Msa1358320	MtrunA17_Chr4g0075201	46.835	79	41	1	87	164	252	330	3.73e-21	89.7
Msa1358320	MtrunA17_Chr2g0288871	46.753	77	40	1	85	160	288	364	9.09e-21	89.0
Msa1358320	MtrunA17_Chr5g0447701	42.045	88	49	1	73	158	221	308	2.22e-20	87.0
Msa1358320	MtrunA17_Chr5g0447701	48.438	64	32	1	100	163	90	152	6.57e-13	65.9
Msa1358320	MtrunA17_Chr3g0099641	44.048	84	46	1	85	167	234	317	5.39e-20	86.7
Msa1358320	MtrunA17_Chr2g0322391	41.758	91	52	1	75	164	322	412	1.45e-19	85.5
Msa1358320	MtrunA17_Chr7g0263531	51.471	68	33	0	91	158	350	417	1.08e-18	82.8
Msa1358320	MtrunA17_Chr7g0263531	55.357	56	24	1	103	158	190	244	1.10e-15	73.9
Msa1358320	MtrunA17_Chr4g0025051	45.122	82	44	1	87	167	320	401	1.34e-18	82.8
Msa1358320	MtrunA17_Chr2g0333851	46.154	78	41	1	100	176	167	244	1.52e-18	81.3
Msa1358320	MtrunA17_Chr4g0025061	44.444	81	44	1	85	164	343	423	1.91e-18	82.4
Msa1358320	MtrunA17_Chr1g0188941	47.143	70	37	0	91	160	40	109	2.17e-18	76.6
Msa1358320	MtrunA17_Chr4g0074001	46.154	78	40	1	87	162	344	421	5.76e-18	80.9
Msa1358320	MtrunA17_Chr7g0216891	33.758	157	84	6	31	167	129	285	6.70e-18	80.5
Msa1358320	MtrunA17_Chr3g0136961	54.386	57	25	1	103	158	139	195	7.95e-18	79.0
Msa1358320	MtrunA17_Chr7g0238921	52.632	57	27	0	102	158	124	180	1.23e-17	79.0
Msa1358320	MtrunA17_Chr4g0051181	45.333	75	40	1	87	160	228	302	1.99e-17	79.3
Msa1358320	MtrunA17_Chr1g0189391	50.000	72	35	1	88	158	83	154	2.18e-17	78.2
Msa1358320	MtrunA17_Chr2g0302391	37.864	103	60	2	63	164	175	274	8.89e-17	77.0
Msa1358320	MtrunA17_Chr4g0001361	47.059	68	35	1	100	166	160	227	1.46e-16	75.9
Msa1358320	MtrunA17_Chr4g0060271	43.836	73	40	1	87	158	240	312	5.59e-16	75.1
Msa1358320	MtrunA17_Chr6g0485431	43.662	71	39	1	89	158	141	211	2.83e-15	72.8
Msa1358320	MtrunA17_Chr1g0150281	46.774	62	32	1	103	163	141	202	3.19e-15	72.0
Msa1358320	MtrunA17_Chr5g0447711	44.118	68	38	0	91	158	219	286	3.34e-15	72.0
Msa1358320	MtrunA17_Chr1g0147881	41.176	68	39	1	99	165	259	326	4.71e-14	68.9
Msa1358320	MtrunA17_Chr4g0071521	45.902	61	32	1	99	158	242	302	5.75e-14	68.6
Msa1358320	MtrunA17_Chr8g0347251	47.458	59	28	1	101	156	135	193	1.06e-13	68.2
Msa1358320	MtrunA17_Chr1g0150271	43.548	62	34	1	100	160	99	160	1.22e-13	67.0
Msa1358320	MtrunA17_Chr4g0024391	32.727	110	72	2	62	169	188	297	2.01e-13	67.8
Msa1358320	MtrunA17_Chr7g0244981	36.607	112	64	4	52	156	68	179	2.43e-13	66.6
Msa1358320	MtrunA17_Chr3g0126391	47.458	59	28	1	101	156	132	190	2.50e-13	67.0
Msa1358320	MtrunA17_Chr7g0275531	47.458	59	28	1	101	156	117	175	3.44e-13	66.6
Msa1358320	MtrunA17_Chr5g0432071	50.877	57	27	1	102	158	104	159	3.87e-13	65.1
Msa1358320	MtrunA17_Chr7g0244971	36.066	122	70	5	52	165	68	189	4.56e-13	65.9
Msa1358320	MtrunA17_Chr8g0387981	32.558	129	75	4	36	156	65	189	1.01e-12	65.5
Msa1358320	MtrunA17_Chr4g0053281	40.541	74	42	2	99	171	263	335	1.39e-12	64.7
Msa1358320	MtrunA17_Chr7g0270051	46.552	58	30	1	103	159	54	111	2.26e-12	63.5
Msa1358320	MtrunA17_Chr8g0348311	36.842	76	46	2	86	160	140	214	4.86e-12	63.2
Msa1358320	MtrunA17_Chr5g0401821	44.262	61	33	1	99	158	196	256	1.09e-11	62.0
Msa1358320	MtrunA17_Chr2g0315361	32.540	126	76	3	35	156	85	205	1.39e-11	62.0
Msa1358320	MtrunA17_Chr8g0387501	45.000	60	32	1	101	159	128	187	1.45e-11	61.6
Msa1358320	MtrunA17_Chr1g0184691	42.623	61	34	1	99	158	290	350	6.18e-11	60.1
Msa1358320	MtrunA17_Chr2g0293481	39.344	61	36	1	100	159	265	325	7.51e-11	60.1
Msa1358320	MtrunA17_Chr5g0428351	42.105	57	30	1	103	156	184	240	1.00e-10	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1358320	AT5G13080.1	70.238	84	25	0	88	171	53	136	7.02e-42	138
Msa1358320	AT3G01970.1	67.470	83	27	0	89	171	52	134	8.38e-38	127
Msa1358320	AT1G64000.1	55.789	95	42	0	80	174	92	186	1.84e-34	120
Msa1358320	AT5G41570.1	59.302	86	35	0	89	174	85	170	2.21e-32	115
Msa1358320	AT2G46130.1	52.809	89	42	0	83	171	11	99	1.94e-30	107
Msa1358320	AT5G49520.1	59.155	71	29	0	89	159	208	278	1.12e-26	104
Msa1358320	AT2G30250.1	58.974	78	32	0	83	160	309	386	1.21e-26	104
Msa1358320	AT2G30250.1	35.200	125	63	3	43	159	108	222	1.59e-13	68.2
Msa1358320	AT5G64810.1	51.111	90	39	1	74	158	77	166	1.67e-26	100
Msa1358320	AT1G69310.4	52.500	80	38	0	79	158	124	203	2.97e-26	102
Msa1358320	AT1G69310.2	52.500	80	38	0	79	158	124	203	2.97e-26	102
Msa1358320	AT1G69310.1	52.500	80	38	0	79	158	124	203	2.97e-26	102
Msa1358320	AT4G26640.5	55.952	84	37	0	83	166	186	269	4.49e-26	103
Msa1358320	AT4G26640.5	55.000	60	26	1	100	159	33	91	1.07e-16	77.0
Msa1358320	AT4G26640.6	55.952	84	37	0	83	166	186	269	4.49e-26	103
Msa1358320	AT4G26640.6	55.000	60	26	1	100	159	33	91	1.07e-16	77.0
Msa1358320	AT4G26640.4	55.952	84	37	0	83	166	186	269	4.49e-26	103
Msa1358320	AT4G26640.4	55.000	60	26	1	100	159	33	91	1.07e-16	77.0
Msa1358320	AT4G26640.3	55.952	84	37	0	83	166	186	269	4.49e-26	103
Msa1358320	AT4G26640.3	55.000	60	26	1	100	159	33	91	1.07e-16	77.0
Msa1358320	AT4G26640.7	55.952	84	37	0	83	166	322	405	4.66e-26	104
Msa1358320	AT4G26640.7	55.000	60	26	1	100	159	169	227	8.07e-17	77.8
Msa1358320	AT4G26640.1	55.952	84	37	0	83	166	290	373	6.18e-26	103
Msa1358320	AT4G26640.1	55.000	60	26	1	100	159	137	195	1.00e-16	77.4
Msa1358320	AT4G26640.2	55.952	84	37	0	83	166	362	445	6.30e-26	103
Msa1358320	AT4G26640.2	55.000	60	26	1	100	159	209	267	8.78e-17	77.8
Msa1358320	AT2G44745.1	46.237	93	49	1	83	174	126	218	9.35e-26	99.0
Msa1358320	AT1G13960.1	52.632	76	36	0	83	158	390	465	1.11e-25	103
Msa1358320	AT1G13960.1	41.071	112	58	4	48	158	180	284	1.06e-18	83.2
Msa1358320	AT1G13960.2	52.632	76	36	0	83	158	237	312	1.24e-25	101
Msa1358320	AT1G13960.2	36.641	131	73	5	29	158	10	131	2.36e-18	81.6
Msa1358320	AT5G07100.2	44.444	117	58	1	44	160	90	199	1.54e-25	98.6
Msa1358320	AT5G07100.2	46.875	64	34	0	102	165	24	87	1.52e-14	69.3
Msa1358320	AT5G07100.4	44.444	117	58	1	44	160	90	199	1.54e-25	98.6
Msa1358320	AT5G07100.4	46.875	64	34	0	102	165	24	87	1.52e-14	69.3
Msa1358320	AT5G07100.5	44.444	117	58	1	44	160	90	199	1.54e-25	98.6
Msa1358320	AT5G07100.5	46.875	64	34	0	102	165	24	87	1.52e-14	69.3
Msa1358320	AT5G07100.3	44.444	117	58	1	44	160	90	199	1.54e-25	98.6
Msa1358320	AT5G07100.3	46.875	64	34	0	102	165	24	87	1.52e-14	69.3
Msa1358320	AT2G46130.2	49.438	89	41	1	83	171	11	95	1.72e-25	95.1
Msa1358320	AT2G03340.1	45.000	100	55	0	83	182	396	495	2.14e-25	102
Msa1358320	AT2G03340.1	39.231	130	64	4	60	182	214	335	5.93e-18	81.3
Msa1358320	AT5G26170.1	55.714	70	31	0	89	158	100	169	2.44e-25	96.7
Msa1358320	AT4G39410.1	49.367	79	40	0	80	158	201	279	3.76e-25	99.4
Msa1358320	AT5G07100.1	45.217	115	56	1	44	158	183	290	4.96e-25	99.0
Msa1358320	AT5G07100.1	46.875	64	34	0	102	165	117	180	1.11e-14	70.9
Msa1358320	AT2G38470.1	46.903	113	49	1	59	160	308	420	7.54e-25	100
Msa1358320	AT2G38470.1	51.724	58	27	1	102	159	184	240	1.14e-14	71.6
Msa1358320	AT5G56270.1	57.692	78	33	0	83	160	468	545	9.42e-25	100
Msa1358320	AT5G56270.1	50.877	57	27	1	102	158	273	328	6.25e-15	72.4
Msa1358320	AT3G01080.2	53.846	78	36	0	83	160	325	402	1.43e-24	99.8
Msa1358320	AT3G01080.2	52.632	57	26	1	102	158	205	260	6.70e-15	72.4
Msa1358320	AT3G01080.1	53.846	78	36	0	83	160	287	364	1.86e-24	99.0
Msa1358320	AT3G01080.1	52.632	57	26	1	102	158	167	222	8.29e-15	72.0
Msa1358320	AT1G29860.1	54.167	72	33	0	89	160	123	194	6.00e-24	95.9
Msa1358320	AT2G47260.1	48.864	88	44	1	72	158	143	230	7.83e-24	96.3
Msa1358320	AT4G18170.1	56.522	69	30	0	92	160	162	230	1.14e-23	95.5
Msa1358320	AT4G26440.1	47.170	106	53	1	64	166	331	436	1.06e-22	94.7
Msa1358320	AT4G26440.1	52.632	57	26	1	102	158	178	233	1.65e-16	77.0
Msa1358320	AT5G46350.1	53.623	69	32	0	92	160	173	241	1.52e-22	92.8
Msa1358320	AT3G62340.1	56.338	71	31	0	89	159	105	175	5.54e-22	90.5
Msa1358320	AT4G04450.2	45.455	88	46	2	79	164	174	261	2.49e-21	90.5
Msa1358320	AT1G69310.3	48.750	80	37	1	79	158	124	199	2.76e-21	88.6
Msa1358320	AT4G04450.1	45.455	88	46	2	79	164	268	355	9.10e-21	89.4
Msa1358320	AT2G04880.2	51.429	70	34	0	89	158	270	339	4.33e-20	87.0
Msa1358320	AT2G04880.2	56.667	60	25	1	100	159	109	167	1.88e-17	79.7
Msa1358320	AT2G04880.1	38.739	111	54	1	48	158	267	363	5.03e-20	87.0
Msa1358320	AT2G04880.1	56.667	60	25	1	100	159	109	167	2.13e-17	79.3
Msa1358320	AT1G62300.1	43.333	90	50	1	72	160	282	371	6.04e-20	87.0
Msa1358320	AT4G22070.4	48.000	75	38	1	87	160	282	356	1.01e-19	86.3
Msa1358320	AT4G22070.3	48.000	75	38	1	87	160	282	356	1.01e-19	86.3
Msa1358320	AT4G22070.2	48.000	75	38	1	87	160	282	356	1.01e-19	86.3
Msa1358320	AT4G22070.1	48.000	75	38	1	87	160	282	356	1.01e-19	86.3
Msa1358320	AT2G21900.1	49.315	73	34	1	90	159	94	166	2.35e-19	82.0
Msa1358320	AT2G37260.2	51.471	68	33	0	91	158	256	323	2.65e-19	84.0
Msa1358320	AT2G37260.2	55.357	56	24	1	103	158	84	138	8.83e-14	68.6
Msa1358320	AT2G37260.3	51.471	68	33	0	91	158	258	325	2.67e-19	84.3
Msa1358320	AT2G37260.3	55.357	56	24	1	103	158	86	140	8.73e-14	68.6
Msa1358320	AT1G55600.1	45.349	86	46	1	75	159	279	364	3.23e-19	84.7
Msa1358320	AT2G37260.1	51.471	68	33	0	91	158	338	405	3.29e-19	84.3
Msa1358320	AT2G37260.1	55.357	56	24	1	103	158	166	220	7.59e-14	69.3
Msa1358320	AT4G01720.1	48.000	75	38	1	87	160	224	298	3.32e-19	84.7
Msa1358320	AT4G30935.1	44.211	95	51	1	70	162	299	393	9.57e-19	83.2
Msa1358320	AT5G15130.2	40.476	84	49	1	85	167	168	251	6.93e-18	80.9
Msa1358320	AT5G15130.1	41.975	81	46	1	85	164	210	290	1.07e-17	80.5
Msa1358320	AT1G68150.1	41.304	92	50	2	77	167	213	301	1.69e-17	79.3
Msa1358320	AT1G18860.1	42.857	77	43	1	85	160	222	298	3.20e-17	79.0
Msa1358320	AT1G80840.1	42.105	76	43	1	100	174	144	219	6.23e-17	77.0
Msa1358320	AT5G24110.1	50.847	59	26	1	101	156	112	170	2.38e-16	75.5
Msa1358320	AT4G31800.2	49.123	57	28	1	103	158	112	168	5.20e-16	73.9
Msa1358320	AT4G31800.1	49.123	57	28	1	103	158	177	233	8.80e-16	73.9
Msa1358320	AT3G01080.3	52.632	57	26	1	102	158	205	260	3.01e-15	72.8
Msa1358320	AT2G25000.2	47.368	57	29	1	103	158	104	160	5.82e-15	70.9
Msa1358320	AT2G25000.4	47.368	57	29	1	103	158	104	160	5.82e-15	70.9
Msa1358320	AT2G25000.3	47.368	57	29	1	103	158	126	182	7.75e-15	70.9
Msa1358320	AT5G43290.1	49.153	59	30	0	100	158	112	170	9.57e-15	70.9
Msa1358320	AT2G25000.1	47.368	57	29	1	103	158	147	203	1.17e-14	70.5
Msa1358320	AT4G11070.1	30.263	152	94	5	15	156	49	198	4.67e-14	69.3
Msa1358320	AT4G12020.10	53.448	58	26	1	101	158	467	523	7.02e-14	69.7
Msa1358320	AT4G12020.3	53.448	58	26	1	101	158	467	523	7.09e-14	69.7
Msa1358320	AT4G12020.2	53.448	58	26	1	101	158	467	523	7.30e-14	69.7
Msa1358320	AT4G12020.6	53.448	58	26	1	101	158	467	523	7.34e-14	69.7
Msa1358320	AT4G12020.8	53.448	58	26	1	101	158	467	523	7.34e-14	69.7
Msa1358320	AT4G12020.1	53.448	58	26	1	101	158	467	523	7.42e-14	69.7
Msa1358320	AT4G12020.9	53.448	58	26	1	101	158	467	523	7.42e-14	69.7
Msa1358320	AT4G12020.4	53.448	58	26	1	101	158	467	523	7.51e-14	69.7
Msa1358320	AT4G12020.7	53.448	58	26	1	101	158	467	523	7.63e-14	69.3
Msa1358320	AT4G12020.5	53.448	58	26	1	101	158	400	456	7.64e-14	69.3
Msa1358320	AT1G69810.2	46.970	66	33	2	101	164	144	209	1.16e-13	68.2
Msa1358320	AT4G12020.11	53.448	58	26	1	101	158	467	523	1.17e-13	68.9
Msa1358320	AT1G69810.1	48.387	62	30	2	101	160	202	263	1.46e-13	68.2
Msa1358320	AT4G11070.2	30.935	139	85	4	28	156	29	166	1.99e-13	67.4
Msa1358320	AT4G23810.1	51.724	58	25	1	102	156	158	215	4.14e-13	66.6
Msa1358320	AT3G56400.1	30.137	146	92	3	38	173	55	200	4.32e-13	66.2
Msa1358320	AT5G01900.1	41.333	75	41	1	96	167	104	178	8.05e-13	65.5
Msa1358320	AT4G31550.1	45.902	61	32	1	99	158	243	303	8.75e-13	65.9
Msa1358320	AT4G31550.2	45.902	61	32	1	99	158	242	302	8.79e-13	65.9
Msa1358320	AT2G24570.1	45.902	61	32	1	99	158	240	300	1.44e-12	65.1
Msa1358320	AT5G45260.1	35.955	89	50	3	98	181	1202	1288	1.57e-12	65.5
Msa1358320	AT4G24240.1	45.902	61	32	1	99	158	278	338	1.59e-12	65.1
Msa1358320	AT2G30590.1	43.548	62	34	1	99	159	310	371	2.13e-12	64.7
Msa1358320	AT2G40750.1	36.957	92	46	3	90	169	135	226	2.14e-12	64.7
Msa1358320	AT2G23320.1	42.623	61	34	1	99	158	237	297	4.22e-12	63.9
Msa1358320	AT5G52830.1	36.709	79	49	1	96	173	159	237	6.54e-12	63.5
Msa1358320	AT4G01250.1	36.842	76	46	2	86	160	113	187	1.26e-11	62.4
Msa1358320	AT1G30650.1	33.010	103	64	4	60	159	175	275	1.42e-11	62.8
Msa1358320	AT4G23550.1	35.616	73	46	1	87	158	125	197	2.18e-11	61.6
Msa1358320	AT1G66560.1	44.068	59	30	1	102	157	103	161	2.37e-11	61.2
Msa1358320	AT2G34830.1	36.620	71	43	2	91	159	203	273	3.58e-11	61.2
Msa1358320	AT2G40740.1	44.828	58	29	1	102	156	173	230	3.64e-11	60.8
Msa1358320	AT2G40740.3	44.828	58	29	1	102	156	182	239	3.86e-11	60.8
Msa1358320	AT1G29280.1	41.379	58	33	1	103	159	75	132	4.04e-11	60.5
Msa1358320	AT2G34830.2	36.620	71	43	2	91	159	212	282	4.37e-11	61.2
Msa1358320	AT5G28650.1	42.623	61	34	1	99	158	259	319	5.97e-11	60.5

Find 58 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTATTTCTTTGCCTCCTTTC+TGG	0.072162	tig0016223:+6781	None:intergenic
TTGAAATTCATTGAATATTA+TGG	0.088685	tig0016223:-7267	Msa1358320:five_prime_UTR
CTCCTCCAGTACATCGATTT+TGG	0.140480	tig0016223:-7297	Msa1358320:five_prime_UTR
TTAGTTGGTTTAACATTAAA+AGG	0.235904	tig0016223:+6864	None:intergenic
TATGCATGTGTCGTATATAA+TGG	0.254604	tig0016223:+6988	None:intergenic
TTCCACGACCTGCTCATCTT+TGG	0.291905	tig0016223:+6169	None:intergenic
TGAAATTCATTGAATATTAT+GGG	0.294072	tig0016223:-7266	Msa1358320:five_prime_UTR
GCTCATCTTTGGAGTGCCTT+TGG	0.299734	tig0016223:+6180	None:intergenic
GGTTTCCGGTGGAGAAAGTA+TGG	0.301787	tig0016223:-6705	Msa1358320:CDS
ATATACTAGATGATGGTTTC+CGG	0.316230	tig0016223:-6719	Msa1358320:CDS
GCATATGGTGAAGATGAGAT+AGG	0.329659	tig0016223:+6891	None:intergenic
TTTAATGTTAAACCAACTAA+TGG	0.357254	tig0016223:-6861	Msa1358320:CDS
TAAAATTGAAACTACTATAA+TGG	0.364418	tig0016223:-7210	Msa1358320:five_prime_UTR
GTTGCGAAATGGTTCGGATT+CGG	0.377695	tig0016223:-5914	Msa1358320:three_prime_UTR
CTTTCAGCTGACTTCTCTAC+AGG	0.394519	tig0016223:+6119	None:intergenic
TCAAGAAAATAAATAAACTA+TGG	0.398587	tig0016223:+7182	None:intergenic
CCATAACCATAAAAGTGAAT+TGG	0.401493	tig0016223:+5984	None:intergenic
ATGCATGTGTCGTATATAAT+GGG	0.406992	tig0016223:+6989	None:intergenic
TTCACATGATTTAGTTAAGC+AGG	0.411866	tig0016223:+6007	None:intergenic
TAAATCCAAAATCGATGTAC+TGG	0.419447	tig0016223:+7292	None:intergenic
GGTTCTAAGATCAAATGGTT+TGG	0.427691	tig0016223:+5955	None:intergenic
TGAATATTAGAGCCATTAGT+TGG	0.435523	tig0016223:+6849	None:intergenic
TAATGAAGTTTCTCAAGATC+TGG	0.441173	tig0016223:+6090	None:intergenic
ACATTAAAAGGTGAAGCATA+TGG	0.441902	tig0016223:+6876	None:intergenic
AACCACTTCTCACAACAAAC+TGG	0.443186	tig0016223:+5934	None:intergenic
AAACTGGTTCTAAGATCAAA+TGG	0.454910	tig0016223:+5950	None:intergenic
AACACTTCATGTTTCTCCAT+TGG	0.474081	tig0016223:+6918	None:intergenic
CATATGGTGAAGATGAGATA+GGG	0.480605	tig0016223:+6892	None:intergenic
GAAGTGGTTGCGAAATGGTT+CGG	0.491170	tig0016223:-5920	Msa1358320:three_prime_UTR
CAGATTGATATACTAGATGA+TGG	0.495665	tig0016223:-6726	Msa1358320:CDS
TCTTATTACTTCAAAACCAA+TGG	0.501778	tig0016223:-6934	Msa1358320:CDS
TACTACAAATGCACTTATGA+AGG	0.510375	tig0016223:-6224	Msa1358320:CDS
TATTTAAAATAATGTTACAT+TGG	0.512653	tig0016223:+6041	None:intergenic
CTCCAAAGATGAGCAGGTCG+TGG	0.520505	tig0016223:-6171	Msa1358320:CDS
GAAACATGTGGGCGGCAAGA+AGG	0.521155	tig0016223:+7053	None:intergenic
TTTCCCCATACTTTCTCCAC+CGG	0.530517	tig0016223:+6700	None:intergenic
AAGGAGACTTCAAGCCAGAA+AGG	0.533731	tig0016223:-6795	Msa1358320:CDS
TGTGAGAAGTGGTTGCGAAA+TGG	0.540802	tig0016223:-5925	Msa1358320:three_prime_UTR
GTCGTGGAAACAACTTATGA+AGG	0.541326	tig0016223:-6155	Msa1358320:CDS
AAGGCACTCCAAAGATGAGC+AGG	0.544902	tig0016223:-6177	Msa1358320:CDS
AACCAGTTTGTTGTGAGAAG+TGG	0.546810	tig0016223:-5936	Msa1358320:three_prime_UTR
GAGAAAGTATGGGGAAAAGA+TGG	0.549845	tig0016223:-6694	Msa1358320:CDS
TGAACTTCATGCGTGAAACA+TGG	0.562698	tig0016223:+7133	None:intergenic
ATCCAAAATCGATGTACTGG+AGG	0.586139	tig0016223:+7295	None:intergenic
GTTTCCGGTGGAGAAAGTAT+GGG	0.605222	tig0016223:-6704	Msa1358320:CDS
TGAAAGACAACAAATTCCCT+AGG	0.608578	tig0016223:-6671	Msa1358320:intron
GGCAAGAAGGTCAATATGTG+TGG	0.616959	tig0016223:+7066	None:intergenic
TAAGGAGATGATGAAACATG+TGG	0.619264	tig0016223:+7041	None:intergenic
TCGTGGAAACAACTTATGAA+GGG	0.629334	tig0016223:-6154	Msa1358320:CDS
TACTAGATGATGGTTTCCGG+TGG	0.631774	tig0016223:-6716	Msa1358320:CDS
ATGCACTTATGAAGGCTGCA+AGG	0.637608	tig0016223:-6216	Msa1358320:CDS
GAGACTTCAAGCCAGAAAGG+AGG	0.650325	tig0016223:-6792	Msa1358320:CDS
AGGTAAAGAAACAAATCCAA+AGG	0.652137	tig0016223:-6196	Msa1358320:CDS
TTTCCGGTGGAGAAAGTATG+GGG	0.671158	tig0016223:-6703	Msa1358320:CDS
TTTCAGCTGACTTCTCTACA+GGG	0.671245	tig0016223:+6120	None:intergenic
AAGGAGATGATGAAACATGT+GGG	0.673240	tig0016223:+7042	None:intergenic
ACAAATATGTATTTCAAACG+AGG	0.693150	tig0016223:-6752	Msa1358320:CDS
GAGATGATGAAACATGTGGG+CGG	0.727471	tig0016223:+7045	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATTTAAAATAATGTTACAT+TGG	+	tig0016223:7120-7139	None:intergenic	10.0%
!!!	TGTAACATTATTTTAAATAT+TGG	-	tig0016223:7121-7140	Msa1358320:five_prime_UTR	10.0%
!!!	TATTTAAAATAATGTTACAT+TGG	+	tig0016223:7120-7139	None:intergenic	10.0%
!!!	TGTAACATTATTTTAAATAT+TGG	-	tig0016223:7121-7140	Msa1358320:five_prime_UTR	10.0%
!!	TTGAAATTCATTGAATATTA+TGG	-	tig0016223:5891-5910	Msa1358320:three_prime_UTR	15.0%
!!	TGAAATTCATTGAATATTAT+GGG	-	tig0016223:5892-5911	Msa1358320:three_prime_UTR	15.0%
!!	TAAAATTGAAACTACTATAA+TGG	-	tig0016223:5948-5967	Msa1358320:three_prime_UTR	15.0%
!!	TCAAGAAAATAAATAAACTA+TGG	+	tig0016223:5979-5998	None:intergenic	15.0%
!!	AGAATATCTAAAAACTAAAA+AGG	-	tig0016223:6344-6363	Msa1358320:intron	15.0%
!!	TTGAAATTCATTGAATATTA+TGG	-	tig0016223:5891-5910	Msa1358320:three_prime_UTR	15.0%
!!	TGAAATTCATTGAATATTAT+GGG	-	tig0016223:5892-5911	Msa1358320:three_prime_UTR	15.0%
!!	TAAAATTGAAACTACTATAA+TGG	-	tig0016223:5948-5967	Msa1358320:three_prime_UTR	15.0%
!!	TCAAGAAAATAAATAAACTA+TGG	+	tig0016223:5979-5998	None:intergenic	15.0%
!!	AGAATATCTAAAAACTAAAA+AGG	-	tig0016223:6344-6363	Msa1358320:intron	15.0%
!!!	TTAGTTGGTTTAACATTAAA+AGG	+	tig0016223:6297-6316	None:intergenic	20.0%
!!	TTTAATGTTAAACCAACTAA+TGG	-	tig0016223:6297-6316	Msa1358320:intron	20.0%
!!	TTTCTAGATAGAATAATTCT+TGG	+	tig0016223:6624-6643	None:intergenic	20.0%
!!!	TTAGTTGGTTTAACATTAAA+AGG	+	tig0016223:6297-6316	None:intergenic	20.0%
!!	TTTAATGTTAAACCAACTAA+TGG	-	tig0016223:6297-6316	Msa1358320:intron	20.0%
!!	TTTCTAGATAGAATAATTCT+TGG	+	tig0016223:6624-6643	None:intergenic	20.0%
!!!	TGGTTTTGAAGTAATAAGAA+AGG	+	tig0016223:6223-6242	None:intergenic	25.0%
!	TCTTATTACTTCAAAACCAA+TGG	-	tig0016223:6224-6243	Msa1358320:CDS	25.0%
!	ACAAATATGTATTTCAAACG+AGG	-	tig0016223:6406-6425	Msa1358320:intron	25.0%
!!!	TATTTTTTGTGTTAACTCTC+CGG	-	tig0016223:6538-6557	Msa1358320:intron	25.0%
!	ACAAAAATTAAACAAGGTCA+GGG	+	tig0016223:6886-6905	None:intergenic	25.0%
!	AACAAAAATTAAACAAGGTC+AGG	+	tig0016223:6887-6906	None:intergenic	25.0%
!	GTTGGAACAAAAATTAAACA+AGG	+	tig0016223:6892-6911	None:intergenic	25.0%
!!!	TGGTTTTGAAGTAATAAGAA+AGG	+	tig0016223:6223-6242	None:intergenic	25.0%
!	TCTTATTACTTCAAAACCAA+TGG	-	tig0016223:6224-6243	Msa1358320:CDS	25.0%
!	ACAAATATGTATTTCAAACG+AGG	-	tig0016223:6406-6425	Msa1358320:intron	25.0%
!!!	TATTTTTTGTGTTAACTCTC+CGG	-	tig0016223:6538-6557	Msa1358320:intron	25.0%
!	ACAAAAATTAAACAAGGTCA+GGG	+	tig0016223:6886-6905	None:intergenic	25.0%
!	AACAAAAATTAAACAAGGTC+AGG	+	tig0016223:6887-6906	None:intergenic	25.0%
!	GTTGGAACAAAAATTAAACA+AGG	+	tig0016223:6892-6911	None:intergenic	25.0%
	TAAATCCAAAATCGATGTAC+TGG	+	tig0016223:5869-5888	None:intergenic	30.0%
!	ATAATGGGAAAAAAGGATGT+AGG	+	tig0016223:6157-6176	None:intergenic	30.0%
!	GTCGTATATAATGGGAAAAA+AGG	+	tig0016223:6164-6183	None:intergenic	30.0%
	ATGCATGTGTCGTATATAAT+GGG	+	tig0016223:6172-6191	None:intergenic	30.0%
	TATGCATGTGTCGTATATAA+TGG	+	tig0016223:6173-6192	None:intergenic	30.0%
!	TACGACACATGCATAATTTT+TGG	-	tig0016223:6178-6197	Msa1358320:CDS	30.0%
	ACATTAAAAGGTGAAGCATA+TGG	+	tig0016223:6285-6304	None:intergenic	30.0%
	TGAATATTAGAGCCATTAGT+TGG	+	tig0016223:6312-6331	None:intergenic	30.0%
	CAGATTGATATACTAGATGA+TGG	-	tig0016223:6432-6451	Msa1358320:intron	30.0%
!	ATATACTAGATGATGGTTTC+CGG	-	tig0016223:6439-6458	Msa1358320:intron	30.0%
	TAAATAATGAGACGAACCTA+GGG	+	tig0016223:6506-6525	None:intergenic	30.0%
	TTAAATAATGAGACGAACCT+AGG	+	tig0016223:6507-6526	None:intergenic	30.0%
	ACCATTTGAACTCAATTGTT+TGG	-	tig0016223:6691-6710	Msa1358320:CDS	30.0%
	ACCAAACAATTGAGTTCAAA+TGG	+	tig0016223:6695-6714	None:intergenic	30.0%
	CTGTAAGCAGAAAATAAAGT+TGG	+	tig0016223:6910-6929	None:intergenic	30.0%
	TACTACAAATGCACTTATGA+AGG	-	tig0016223:6934-6953	Msa1358320:CDS	30.0%
	AGGTAAAGAAACAAATCCAA+AGG	-	tig0016223:6962-6981	Msa1358320:CDS	30.0%
	TAATGAAGTTTCTCAAGATC+TGG	+	tig0016223:7071-7090	None:intergenic	30.0%
	TTCACATGATTTAGTTAAGC+AGG	+	tig0016223:7154-7173	None:intergenic	30.0%
!!	TGTGAACCAATTCACTTTTA+TGG	-	tig0016223:7168-7187	Msa1358320:five_prime_UTR	30.0%
	CCATAACCATAAAAGTGAAT+TGG	+	tig0016223:7177-7196	None:intergenic	30.0%
!!	CCAATTCACTTTTATGGTTA+TGG	-	tig0016223:7174-7193	Msa1358320:five_prime_UTR	30.0%
!!	AAACTGGTTCTAAGATCAAA+TGG	+	tig0016223:7211-7230	None:intergenic	30.0%
	TAAATCCAAAATCGATGTAC+TGG	+	tig0016223:5869-5888	None:intergenic	30.0%
!	ATAATGGGAAAAAAGGATGT+AGG	+	tig0016223:6157-6176	None:intergenic	30.0%
!	GTCGTATATAATGGGAAAAA+AGG	+	tig0016223:6164-6183	None:intergenic	30.0%
	ATGCATGTGTCGTATATAAT+GGG	+	tig0016223:6172-6191	None:intergenic	30.0%
	TATGCATGTGTCGTATATAA+TGG	+	tig0016223:6173-6192	None:intergenic	30.0%
!	TACGACACATGCATAATTTT+TGG	-	tig0016223:6178-6197	Msa1358320:CDS	30.0%
	ACATTAAAAGGTGAAGCATA+TGG	+	tig0016223:6285-6304	None:intergenic	30.0%
	TGAATATTAGAGCCATTAGT+TGG	+	tig0016223:6312-6331	None:intergenic	30.0%
	CAGATTGATATACTAGATGA+TGG	-	tig0016223:6432-6451	Msa1358320:intron	30.0%
!	ATATACTAGATGATGGTTTC+CGG	-	tig0016223:6439-6458	Msa1358320:intron	30.0%
	TAAATAATGAGACGAACCTA+GGG	+	tig0016223:6506-6525	None:intergenic	30.0%
	TTAAATAATGAGACGAACCT+AGG	+	tig0016223:6507-6526	None:intergenic	30.0%
	ACCATTTGAACTCAATTGTT+TGG	-	tig0016223:6691-6710	Msa1358320:CDS	30.0%
	ACCAAACAATTGAGTTCAAA+TGG	+	tig0016223:6695-6714	None:intergenic	30.0%
	CTGTAAGCAGAAAATAAAGT+TGG	+	tig0016223:6910-6929	None:intergenic	30.0%
	TACTACAAATGCACTTATGA+AGG	-	tig0016223:6934-6953	Msa1358320:CDS	30.0%
	AGGTAAAGAAACAAATCCAA+AGG	-	tig0016223:6962-6981	Msa1358320:CDS	30.0%
	TAATGAAGTTTCTCAAGATC+TGG	+	tig0016223:7071-7090	None:intergenic	30.0%
	TTCACATGATTTAGTTAAGC+AGG	+	tig0016223:7154-7173	None:intergenic	30.0%
!!	TGTGAACCAATTCACTTTTA+TGG	-	tig0016223:7168-7187	Msa1358320:five_prime_UTR	30.0%
	CCATAACCATAAAAGTGAAT+TGG	+	tig0016223:7177-7196	None:intergenic	30.0%
!!	CCAATTCACTTTTATGGTTA+TGG	-	tig0016223:7174-7193	Msa1358320:five_prime_UTR	30.0%
!!	AAACTGGTTCTAAGATCAAA+TGG	+	tig0016223:7211-7230	None:intergenic	30.0%
	AAGGAGATGATGAAACATGT+GGG	+	tig0016223:6119-6138	None:intergenic	35.0%
	TAAGGAGATGATGAAACATG+TGG	+	tig0016223:6120-6139	None:intergenic	35.0%
!	TAGGATGCATGCATTTTCTA+AGG	+	tig0016223:6138-6157	None:intergenic	35.0%
	AACACTTCATGTTTCTCCAT+TGG	+	tig0016223:6243-6262	None:intergenic	35.0%
	CATATGGTGAAGATGAGATA+GGG	+	tig0016223:6269-6288	None:intergenic	35.0%
!	TTATTTCTTTGCCTCCTTTC+TGG	+	tig0016223:6380-6399	None:intergenic	35.0%
	TGAAAGACAACAAATTCCCT+AGG	-	tig0016223:6487-6506	Msa1358320:intron	35.0%
	TCGTGGAAACAACTTATGAA+GGG	-	tig0016223:7004-7023	Msa1358320:CDS	35.0%
!!	GGTTCTAAGATCAAATGGTT+TGG	+	tig0016223:7206-7225	None:intergenic	35.0%
	AAGGAGATGATGAAACATGT+GGG	+	tig0016223:6119-6138	None:intergenic	35.0%
	TAAGGAGATGATGAAACATG+TGG	+	tig0016223:6120-6139	None:intergenic	35.0%
!	TAGGATGCATGCATTTTCTA+AGG	+	tig0016223:6138-6157	None:intergenic	35.0%
	AACACTTCATGTTTCTCCAT+TGG	+	tig0016223:6243-6262	None:intergenic	35.0%
	CATATGGTGAAGATGAGATA+GGG	+	tig0016223:6269-6288	None:intergenic	35.0%
!	TTATTTCTTTGCCTCCTTTC+TGG	+	tig0016223:6380-6399	None:intergenic	35.0%
	TGAAAGACAACAAATTCCCT+AGG	-	tig0016223:6487-6506	Msa1358320:intron	35.0%
	TCGTGGAAACAACTTATGAA+GGG	-	tig0016223:7004-7023	Msa1358320:CDS	35.0%
!!	GGTTCTAAGATCAAATGGTT+TGG	+	tig0016223:7206-7225	None:intergenic	35.0%
	TGAACTTCATGCGTGAAACA+TGG	+	tig0016223:6028-6047	None:intergenic	40.0%
	GCATATGGTGAAGATGAGAT+AGG	+	tig0016223:6270-6289	None:intergenic	40.0%
!	GAGAAAGTATGGGGAAAAGA+TGG	-	tig0016223:6464-6483	Msa1358320:intron	40.0%
!	GCCAAGAGATAAGATTAGTC+TGG	-	tig0016223:6598-6617	Msa1358320:intron	40.0%
	GCCAGACTAATCTTATCTCT+TGG	+	tig0016223:6602-6621	None:intergenic	40.0%
	GTCGTGGAAACAACTTATGA+AGG	-	tig0016223:7003-7022	Msa1358320:CDS	40.0%
!	TTTCAGCTGACTTCTCTACA+GGG	+	tig0016223:7041-7060	None:intergenic	40.0%
!!	AACCAGTTTGTTGTGAGAAG+TGG	-	tig0016223:7222-7241	Msa1358320:five_prime_UTR	40.0%
	AACCACTTCTCACAACAAAC+TGG	+	tig0016223:7227-7246	None:intergenic	40.0%
	TGAACTTCATGCGTGAAACA+TGG	+	tig0016223:6028-6047	None:intergenic	40.0%
	GCATATGGTGAAGATGAGAT+AGG	+	tig0016223:6270-6289	None:intergenic	40.0%
!	GAGAAAGTATGGGGAAAAGA+TGG	-	tig0016223:6464-6483	Msa1358320:intron	40.0%
!	GCCAAGAGATAAGATTAGTC+TGG	-	tig0016223:6598-6617	Msa1358320:intron	40.0%
	GCCAGACTAATCTTATCTCT+TGG	+	tig0016223:6602-6621	None:intergenic	40.0%
	GTCGTGGAAACAACTTATGA+AGG	-	tig0016223:7003-7022	Msa1358320:CDS	40.0%
!	TTTCAGCTGACTTCTCTACA+GGG	+	tig0016223:7041-7060	None:intergenic	40.0%
!!	AACCAGTTTGTTGTGAGAAG+TGG	-	tig0016223:7222-7241	Msa1358320:five_prime_UTR	40.0%
	AACCACTTCTCACAACAAAC+TGG	+	tig0016223:7227-7246	None:intergenic	40.0%
	GGCAAGAAGGTCAATATGTG+TGG	+	tig0016223:6095-6114	None:intergenic	45.0%
	GAGATGATGAAACATGTGGG+CGG	+	tig0016223:6116-6135	None:intergenic	45.0%
	AAGGAGACTTCAAGCCAGAA+AGG	-	tig0016223:6363-6382	Msa1358320:intron	45.0%
!	TACTAGATGATGGTTTCCGG+TGG	-	tig0016223:6442-6461	Msa1358320:intron	45.0%
!	GTTTCCGGTGGAGAAAGTAT+GGG	-	tig0016223:6454-6473	Msa1358320:intron	45.0%
!	TTTCCGGTGGAGAAAGTATG+GGG	-	tig0016223:6455-6474	Msa1358320:intron	45.0%
	TTTCCCCATACTTTCTCCAC+CGG	+	tig0016223:6461-6480	None:intergenic	45.0%
!	TGTTAACTCTCCGGTTCTGA+GGG	-	tig0016223:6547-6566	Msa1358320:intron	45.0%
	TGGCCGAACTCCAGATTATT+GGG	+	tig0016223:6582-6601	None:intergenic	45.0%
	TTGGCCGAACTCCAGATTAT+TGG	+	tig0016223:6583-6602	None:intergenic	45.0%
	ATGCACTTATGAAGGCTGCA+AGG	-	tig0016223:6942-6961	Msa1358320:CDS	45.0%
!	CTTTCAGCTGACTTCTCTAC+AGG	+	tig0016223:7042-7061	None:intergenic	45.0%
	TGTGAGAAGTGGTTGCGAAA+TGG	-	tig0016223:7233-7252	Msa1358320:five_prime_UTR	45.0%
	GAAGTGGTTGCGAAATGGTT+CGG	-	tig0016223:7238-7257	Msa1358320:five_prime_UTR	45.0%
!	GTTGCGAAATGGTTCGGATT+CGG	-	tig0016223:7244-7263	Msa1358320:five_prime_UTR	45.0%
	GGCAAGAAGGTCAATATGTG+TGG	+	tig0016223:6095-6114	None:intergenic	45.0%
	GAGATGATGAAACATGTGGG+CGG	+	tig0016223:6116-6135	None:intergenic	45.0%
	AAGGAGACTTCAAGCCAGAA+AGG	-	tig0016223:6363-6382	Msa1358320:intron	45.0%
!	TACTAGATGATGGTTTCCGG+TGG	-	tig0016223:6442-6461	Msa1358320:intron	45.0%
!	GTTTCCGGTGGAGAAAGTAT+GGG	-	tig0016223:6454-6473	Msa1358320:intron	45.0%
!	TTTCCGGTGGAGAAAGTATG+GGG	-	tig0016223:6455-6474	Msa1358320:intron	45.0%
	TTTCCCCATACTTTCTCCAC+CGG	+	tig0016223:6461-6480	None:intergenic	45.0%
!	TGTTAACTCTCCGGTTCTGA+GGG	-	tig0016223:6547-6566	Msa1358320:intron	45.0%
	TGGCCGAACTCCAGATTATT+GGG	+	tig0016223:6582-6601	None:intergenic	45.0%
	TTGGCCGAACTCCAGATTAT+TGG	+	tig0016223:6583-6602	None:intergenic	45.0%
	ATGCACTTATGAAGGCTGCA+AGG	-	tig0016223:6942-6961	Msa1358320:CDS	45.0%
!	CTTTCAGCTGACTTCTCTAC+AGG	+	tig0016223:7042-7061	None:intergenic	45.0%
	TGTGAGAAGTGGTTGCGAAA+TGG	-	tig0016223:7233-7252	Msa1358320:five_prime_UTR	45.0%
	GAAGTGGTTGCGAAATGGTT+CGG	-	tig0016223:7238-7257	Msa1358320:five_prime_UTR	45.0%
!	GTTGCGAAATGGTTCGGATT+CGG	-	tig0016223:7244-7263	Msa1358320:five_prime_UTR	45.0%
	GAGACTTCAAGCCAGAAAGG+AGG	-	tig0016223:6366-6385	Msa1358320:intron	50.0%
	GGTTTCCGGTGGAGAAAGTA+TGG	-	tig0016223:6453-6472	Msa1358320:intron	50.0%
	GTGTTAACTCTCCGGTTCTG+AGG	-	tig0016223:6546-6565	Msa1358320:intron	50.0%
!	GCCCCCAATAATCTGGAGTT+CGG	-	tig0016223:6576-6595	Msa1358320:intron	50.0%
	GCCGAACTCCAGATTATTGG+GGG	+	tig0016223:6580-6599	None:intergenic	50.0%
	GGCCGAACTCCAGATTATTG+GGG	+	tig0016223:6581-6600	None:intergenic	50.0%
!!	GCTCATCTTTGGAGTGCCTT+TGG	+	tig0016223:6981-7000	None:intergenic	50.0%
!	AAGGCACTCCAAAGATGAGC+AGG	-	tig0016223:6981-7000	Msa1358320:CDS	50.0%
	TTCCACGACCTGCTCATCTT+TGG	+	tig0016223:6992-7011	None:intergenic	50.0%
	GAGACTTCAAGCCAGAAAGG+AGG	-	tig0016223:6366-6385	Msa1358320:intron	50.0%
	GGTTTCCGGTGGAGAAAGTA+TGG	-	tig0016223:6453-6472	Msa1358320:intron	50.0%
	GTGTTAACTCTCCGGTTCTG+AGG	-	tig0016223:6546-6565	Msa1358320:intron	50.0%
!	GCCCCCAATAATCTGGAGTT+CGG	-	tig0016223:6576-6595	Msa1358320:intron	50.0%
	GCCGAACTCCAGATTATTGG+GGG	+	tig0016223:6580-6599	None:intergenic	50.0%
	GGCCGAACTCCAGATTATTG+GGG	+	tig0016223:6581-6600	None:intergenic	50.0%
!!	GCTCATCTTTGGAGTGCCTT+TGG	+	tig0016223:6981-7000	None:intergenic	50.0%
!	AAGGCACTCCAAAGATGAGC+AGG	-	tig0016223:6981-7000	Msa1358320:CDS	50.0%
	TTCCACGACCTGCTCATCTT+TGG	+	tig0016223:6992-7011	None:intergenic	50.0%
	GAAACATGTGGGCGGCAAGA+AGG	+	tig0016223:6108-6127	None:intergenic	55.0%
!!	ACTCTCCGGTTCTGAGGGAA+AGG	-	tig0016223:6552-6571	Msa1358320:intron	55.0%
!!	CTCTCCGGTTCTGAGGGAAA+GGG	-	tig0016223:6553-6572	Msa1358320:intron	55.0%
!!	TCTCCGGTTCTGAGGGAAAG+GGG	-	tig0016223:6554-6573	Msa1358320:intron	55.0%
	GAAAGGGGCCCCCAATAATC+TGG	-	tig0016223:6569-6588	Msa1358320:intron	55.0%
	CTCCAAAGATGAGCAGGTCG+TGG	-	tig0016223:6987-7006	Msa1358320:CDS	55.0%
	GAAACATGTGGGCGGCAAGA+AGG	+	tig0016223:6108-6127	None:intergenic	55.0%
!!	ACTCTCCGGTTCTGAGGGAA+AGG	-	tig0016223:6552-6571	Msa1358320:intron	55.0%
!!	CTCTCCGGTTCTGAGGGAAA+GGG	-	tig0016223:6553-6572	Msa1358320:intron	55.0%
!!	TCTCCGGTTCTGAGGGAAAG+GGG	-	tig0016223:6554-6573	Msa1358320:intron	55.0%
	GAAAGGGGCCCCCAATAATC+TGG	-	tig0016223:6569-6588	Msa1358320:intron	55.0%
	CTCCAAAGATGAGCAGGTCG+TGG	-	tig0016223:6987-7006	Msa1358320:CDS	55.0%
	GGGCCCCTTTCCCTCAGAAC+CGG	+	tig0016223:6560-6579	None:intergenic	65.0%
	GGGCCCCTTTCCCTCAGAAC+CGG	+	tig0016223:6560-6579	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
tig0016223	gene	5864	7316	5864	ID=Msa1358320;Name=Msa1358320
tig0016223	mRNA	5864	7316	5864	ID=Msa1358320-mRNA-1;Parent=Msa1358320;Name=Msa1358320-mRNA-1;_AED=0.00;_eAED=0.00;_QI=280\|1\|1\|1\|1\|1\|2\|191\|186
tig0016223	exon	5864	6250	5864	ID=Msa1358320-mRNA-1:exon:10811;Parent=Msa1358320-mRNA-1
tig0016223	exon	6672	7316	6672	ID=Msa1358320-mRNA-1:exon:10810;Parent=Msa1358320-mRNA-1
tig0016223	five_prime_UTR	7037	7316	7037	ID=Msa1358320-mRNA-1:five_prime_utr;Parent=Msa1358320-mRNA-1
tig0016223	CDS	6672	7036	6672	ID=Msa1358320-mRNA-1:cds;Parent=Msa1358320-mRNA-1
tig0016223	CDS	6055	6250	6055	ID=Msa1358320-mRNA-1:cds;Parent=Msa1358320-mRNA-1
tig0016223	three_prime_UTR	5864	6054	5864	ID=Msa1358320-mRNA-1:three_prime_utr;Parent=Msa1358320-mRNA-1

Gene Sequence

>Msa1358320

ATGCATGCATCCTACATCCTTTTTTCCCATTATATACGACACATGCATAATTTTTGGTGTAGTCTTTTACGTACTACCTTTCTTATTACTTCAAAACCAATGGAGAAACATGAAGTGTTACTCCCTATCTCATCTTCACCATATGCTTCACCTTTTAATGTTAAACCAACTAATGGCTCTAATATTCATGTTAAAAAAGCAGAATATCTAAAAACTAAAAAGGAGACTTCAAGCCAGAAAGGAGGCAAAGAAATAATGAAGCACAAATATGTATTTCAAACGAGGAGTCAGATTGATATACTAGATGATGGTTTCCGGTGGAGAAAGTATGGGGAAAAGATGGTGAAAGACAACAAATTCCCTAGAAGTTACTACAAATGCACTTATGAAGGCTGCAAGGTAAAGAAACAAATCCAAAGGCACTCCAAAGATGAGCAGGTCGTGGAAACAACTTATGAAGGGATGCATATTCACCCTGTAGAGAAGTCAGCTGAAAGCTTCGACCAGATCTTGAGAAACTTCATTACTAACAATCAACTATGTAATGTAACTCCAATGTAA

Protein sequence

>Msa1358320

MHASYILFSHYIRHMHNFWCSLLRTTFLITSKPMEKHEVLLPISSSPYASPFNVKPTNGSNIHVKKAEYLKTKKETSSQKGGKEIMKHKYVFQTRSQIDILDDGFRWRKYGEKMVKDNKFPRSYYKCTYEGCKVKKQIQRHSKDEQVVETTYEGMHIHPVEKSAESFDQILRNFITNNQLCNVTPM*