AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0571200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0571200 MtrunA17_Chr8g0386371 90.943 1325 96 1 1 1301 1 1325 0.0 2418
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 285 sgRNAs with CRISPR-Local

Find 598 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCGGGCTCTTTCTTCTTAC+TGG 0.130822 4_1:+73754150 None:intergenic
GCTAGTGCCTTTCTTCTTAT+TGG 0.147139 4_1:+73757994 None:intergenic
CTCCCATACAACTCATTATT+TGG 0.149244 4_1:+73753035 None:intergenic
TTGTCTTCTACTTGGTTTAA+TGG 0.156026 4_1:+73756666 None:intergenic
CATGGAATTACTTCTCAATT+AGG 0.201965 4_1:-73759884 Msa0571200:five_prime_UTR
TTCTTCTTACTGGATTTGTT+TGG 0.211320 4_1:+73754160 None:intergenic
TTTGGGTTGGTATGAAATTC+TGG 0.220335 4_1:+73754178 None:intergenic
TTTGCATTTAAGACTCTTAC+AGG 0.232400 4_1:-73751829 Msa0571200:CDS
GTATCAGCGTTGCCAGATTT+TGG 0.244275 4_1:-73751727 Msa0571200:CDS
GAATTGCAGGATCCGATTAT+TGG 0.252063 4_1:+73759918 None:intergenic
TTTGACCTCTTTCTTTCTCT+TGG 0.263749 4_1:+73753514 None:intergenic
AAAACGTTGTACATCCTTCT+TGG 0.276092 4_1:+73756717 None:intergenic
TAAGCTTTCAACTGGTTCTT+TGG 0.281208 4_1:+73754615 None:intergenic
GACTCTCACTGGTGCTTTGC+CGG 0.281449 4_1:-73753111 Msa0571200:CDS
CAAAACATTTCAGTTTATAA+TGG 0.284488 4_1:-73753674 Msa0571200:CDS
TGTTTCCCCTCCTCCTTGTT+TGG 0.294797 4_1:+73757962 None:intergenic
GATTTCTCATCATCCACTTC+AGG 0.296303 4_1:+73753884 None:intergenic
TCTGCAGCAGGTATGATTCT+AGG 0.302879 4_1:+73753923 None:intergenic
TCTTCTTACTGGATTTGTTT+GGG 0.306969 4_1:+73754161 None:intergenic
TTTGAAAATTATTATTGAAC+TGG 0.307637 4_1:+73751557 None:intergenic
CAGGTTGCTAAGGGTGAATT+TGG 0.310805 4_1:-73751961 Msa0571200:CDS
CATTTCTCTTCCTCCTTGCT+TGG 0.311996 4_1:+73757872 None:intergenic
ATGGAATTACTTCTCAATTA+GGG 0.320560 4_1:-73759883 Msa0571200:intron
TAGAATTTGTATGTATTTGA+TGG 0.331318 4_1:+73758073 None:intergenic
TTTGCTATGCTCTAGGTTGC+AGG 0.333766 4_1:-73757077 Msa0571200:intron
AACATAATGATGAGTTTGTT+TGG 0.335779 4_1:-73752087 Msa0571200:CDS
CAGGTTGCTGAGGGTGAATT+TGG 0.343581 4_1:-73752285 Msa0571200:CDS
CTGTTCCTTGTGAACAGTTT+GGG 0.344613 4_1:+73753244 None:intergenic
GGCTATGGGATCTGCATATA+AGG 0.346775 4_1:-73758845 Msa0571200:intron
CTCATTGATGACTGCTGCCC+TGG 0.347569 4_1:+73751643 None:intergenic
CATTTCTCTCCGTCCTTGCT+TGG 0.353432 4_1:+73757794 None:intergenic
TTCATTGTCAATCCGTTTGT+TGG 0.355758 4_1:+73759079 None:intergenic
CGGTTGTCAAAGCGACTTGC+TGG 0.356357 4_1:-73753482 Msa0571200:CDS
AACATGATGAGGAATTTGTT+TGG 0.357366 4_1:-73752729 Msa0571200:CDS
AACTACTCTAGGCGCTGATA+TGG 0.358663 4_1:-73754341 Msa0571200:CDS
GATTCTCCATTGGTGAATTT+AGG 0.366382 4_1:+73752867 None:intergenic
CCTTTGCATTCCACTACTCT+TGG 0.366457 4_1:-73753847 Msa0571200:CDS
GGACGCTCGTCAGCTTTCTC+TGG 0.369285 4_1:+73758922 None:intergenic
CAACTCCGGGACAACCTTGC+AGG 0.372248 4_1:+73751599 None:intergenic
TCTTGATATTGTCTTCTACT+TGG 0.375662 4_1:+73756658 None:intergenic
ACCAGTTGAAAGCTTAGAAT+TGG 0.381405 4_1:-73754608 Msa0571200:CDS
ACGACATCTTGAAACTATAA+AGG 0.384153 4_1:-73758032 Msa0571200:CDS
TAGTCCTCAACACAGGTTCC+AGG 0.387395 4_1:+73752172 None:intergenic
TCCACTTGTTTGTCTGCAGC+AGG 0.389170 4_1:+73753911 None:intergenic
TCAGAGCTCACTTTACCATT+TGG 0.392137 4_1:-73753173 Msa0571200:CDS
GGAGCATCTAACCATCTCTA+TGG 0.392261 4_1:-73753362 Msa0571200:CDS
GAAGTGGCATAAAGAAAGAT+TGG 0.392292 4_1:-73756989 Msa0571200:CDS
CAGCCATTAGGCAACCATTC+AGG 0.393639 4_1:+73758901 None:intergenic
AGCATAATGAGAAATTTGTT+TGG 0.395674 4_1:-73752411 Msa0571200:CDS
GCTGTTCCTTGTGAACAGTT+TGG 0.397453 4_1:+73753243 None:intergenic
CTTACTGGATTTGTTTGGGT+TGG 0.400869 4_1:+73754165 None:intergenic
GAGGAAAATTTAGCAGTTCA+AGG 0.403757 4_1:-73751793 Msa0571200:CDS
AGAGCCCGGCATTCCTTGTC+GGG 0.413690 4_1:-73754137 Msa0571200:CDS
CATAGCCGGACCACTTTGTC+GGG 0.414376 4_1:+73758861 None:intergenic
TGGAGAAATGAACGAATTGC+AGG 0.419298 4_1:+73759905 None:intergenic
CCTCCTTGCTTGGAGAATGC+TGG 0.422992 4_1:+73757882 None:intergenic
TGGTCTGTAAGCTTGGTAAC+TGG 0.423826 4_1:+73753989 None:intergenic
CCTCCATCATGACAGTTAAC+AGG 0.423982 4_1:+73751757 None:intergenic
CATGACAGTTAACAGGTTCC+TGG 0.424130 4_1:+73751764 None:intergenic
GCCAATTCTAAGCTTTCAAC+TGG 0.426691 4_1:+73754607 None:intergenic
AGGCAACAACATAAGGAATC+TGG 0.427206 4_1:-73752508 Msa0571200:CDS
TTCTAGAATGATGCAGAAGT+TGG 0.427230 4_1:+73752031 None:intergenic
TTCTAGAATGATGCAGAAGT+TGG 0.427230 4_1:+73752673 None:intergenic
CCGACAAAGTGGTCCGGCTA+TGG 0.429215 4_1:-73758860 Msa0571200:CDS
TGTCTCTTGGCAGCAGGTGA+TGG 0.429849 4_1:+73754804 None:intergenic
AAACTGGAAGATCCAAAATC+TGG 0.430033 4_1:+73751715 None:intergenic
AAGCAACATGATAAGGAATC+TGG 0.432570 4_1:-73752832 Msa0571200:CDS
TGCATGGGTGTAGACTGCTT+TGG 0.439557 4_1:+73754777 None:intergenic
AGTTGATAATCCTCTTGATA+AGG 0.439928 4_1:-73753771 Msa0571200:CDS
CTTTACCATTTGGTGAATCC+TGG 0.440174 4_1:-73753163 Msa0571200:CDS
TTCTAGAACGATGCAGAAGT+TGG 0.445545 4_1:+73752355 None:intergenic
CTGCCAAATAATGAGTTGTA+TGG 0.450710 4_1:-73753038 Msa0571200:CDS
GTCGCGAAAGCAACATGATA+AGG 0.452779 4_1:-73752839 Msa0571200:CDS
GGTACATCGGAGCAGCCTCC+AGG 0.452859 4_1:-73752264 Msa0571200:CDS
TTGCTTGTGTCCATTGCGTT+TGG 0.456520 4_1:+73754271 None:intergenic
CTGAATGGTTGCCTAATGGC+TGG 0.462074 4_1:-73758900 Msa0571200:CDS
CGTCCTGAATGGTTGCCTAA+TGG 0.462094 4_1:-73758904 Msa0571200:CDS
TCAAGATGTCGTAATACCTC+AGG 0.462437 4_1:+73758043 None:intergenic
TTGATTGCATAATCCAAGCT+TGG 0.463182 4_1:+73753818 None:intergenic
TTTACTTCTTTAATCCATCC+AGG 0.463808 4_1:+73757026 None:intergenic
GTTGATAATCCTCTTGATAA+GGG 0.465954 4_1:-73753770 Msa0571200:CDS
ATGGTTGCTCTTGATACCTC+AGG 0.466320 4_1:-73754532 Msa0571200:CDS
CCATAGCCGGACCACTTTGT+CGG 0.466321 4_1:+73758860 None:intergenic
TTTAACGTTACAGTTTGAAA+TGG 0.469195 4_1:+73751919 None:intergenic
TTGAGGACTAGCTCCCCATC+TGG 0.469895 4_1:-73752159 Msa0571200:CDS
CTCTTGGTCTGACCCAAGCT+TGG 0.470998 4_1:-73753831 Msa0571200:CDS
TGATGACTGCTGCCCTGGCA+TGG 0.471120 4_1:+73751648 None:intergenic
TGATTGCATAATCCAAGCTT+GGG 0.471659 4_1:+73753819 None:intergenic
ATAGAGGTGCACACATTGCT+TGG 0.473914 4_1:+73757755 None:intergenic
GTCATGAAGGCAACAACATA+AGG 0.474479 4_1:-73752515 Msa0571200:CDS
GCGACTTGCTGGCATTGAAC+CGG 0.474851 4_1:-73753471 Msa0571200:CDS
ATGTCGTAATACCTCAGGTT+TGG 0.478015 4_1:+73758048 None:intergenic
ACTTCGATATCCCAGCCATT+AGG 0.479281 4_1:+73758889 None:intergenic
CAGTCTTCGAAGATACTGCT+TGG 0.482424 4_1:-73752933 Msa0571200:CDS
TTTCCCGACTCTCTATGTAA+TGG 0.484000 4_1:+73753962 None:intergenic
ACAGGAGGGAAGTCCATGCC+AGG 0.484013 4_1:-73751661 Msa0571200:CDS
CCTGCATTTGACACTGTCAC+TGG 0.484079 4_1:-73753713 Msa0571200:CDS
TTGAGGACTAGCTCCACATC+TGG 0.485220 4_1:-73752477 Msa0571200:CDS
TTATCAGAAGGGCTTGCCTC+CGG 0.488208 4_1:+73753452 None:intergenic
TGCTCTTCCAATAAGAAGAA+AGG 0.488441 4_1:-73758001 Msa0571200:CDS
CCAGTGACAGTGTCAAATGC+AGG 0.489768 4_1:+73753713 None:intergenic
CTGAGCCTGCAAGGTTGTCC+CGG 0.491049 4_1:-73751604 Msa0571200:CDS
TGGTACATTGGATCAACCAC+CGG 0.497117 4_1:-73752583 Msa0571200:CDS
CGGGCTTCAAAACGACTGGC+TGG 0.498052 4_1:-73754118 Msa0571200:CDS
AAGAAAGAGCGTAATATGAA+TGG 0.498524 4_1:-73752957 Msa0571200:CDS
GGATATGGAGTTCATCAGCC+TGG 0.500596 4_1:+73754087 None:intergenic
AAAATCCAAGAGAAAGAAAG+AGG 0.501184 4_1:-73753519 Msa0571200:CDS
TTATCAAGAGGATTATCAAC+TGG 0.501326 4_1:+73753773 None:intergenic
TTCTCATTTCACTTTGACAC+AGG 0.502289 4_1:-73751679 Msa0571200:CDS
TGTTCACAAGGAACAGCAAT+CGG 0.502711 4_1:-73753237 Msa0571200:CDS
TTGTTGTTGCGGATCAACTC+CGG 0.506435 4_1:+73751585 None:intergenic
AAGAGCCCGGCATTCCTTGT+CGG 0.506505 4_1:-73754138 Msa0571200:CDS
CGACAAAGTGGTCCGGCTAT+GGG 0.508093 4_1:-73758859 Msa0571200:CDS
TAAATCATCTCAGCATTTCA+AGG 0.509593 4_1:-73754314 Msa0571200:CDS
TGTTGTTGCGGATCAACTCC+GGG 0.511033 4_1:+73751586 None:intergenic
TCTAGAATGATGCAGAAGTT+GGG 0.511069 4_1:+73752032 None:intergenic
TCTAGAATGATGCAGAAGTT+GGG 0.511069 4_1:+73752674 None:intergenic
TCTAGAACGATGCAGAAGTT+GGG 0.512660 4_1:+73752356 None:intergenic
AAGTGGCATAAAGAAAGATT+GGG 0.512803 4_1:-73756988 Msa0571200:intron
TTGTCGGGCTTCAAAACGAC+TGG 0.513780 4_1:-73754122 Msa0571200:CDS
GTTGTACATCCTTCTTGGAA+TGG 0.513958 4_1:+73756722 None:intergenic
AACTCAGCAGAAGAATCAAC+CGG 0.514125 4_1:+73753092 None:intergenic
TTTGCATTCAAGACTCTCAC+TGG 0.514930 4_1:-73753122 Msa0571200:CDS
TTGAAAATTATTATTGAACT+GGG 0.516712 4_1:+73751558 None:intergenic
GGAAAATTTAGCAGTTCAAG+GGG 0.517942 4_1:-73751791 Msa0571200:CDS
TTCCCATCTCTGAGCCTGCA+AGG 0.518273 4_1:-73751613 Msa0571200:CDS
ATCAATTTCAGGGACTGTAG+AGG 0.518573 4_1:+73753745 None:intergenic
GGATTAAAGAAGTAAAGATT+CGG 0.519086 4_1:-73757019 Msa0571200:CDS
CATCTAACCATCTCTATGGT+GGG 0.520294 4_1:-73753358 Msa0571200:CDS
GAAGCCCGACAAGGAATGCC+GGG 0.521380 4_1:+73754133 None:intergenic
TTAAATGCAAATTCTAAGCA+TGG 0.525992 4_1:+73751841 None:intergenic
TGAAGCCCGACAAGGAATGC+CGG 0.527174 4_1:+73754132 None:intergenic
AGGCAACAACATGAGGAACC+TGG 0.528981 4_1:-73752190 Msa0571200:CDS
ACATTGTCAACCAACTTGAC+AGG 0.528995 4_1:+73754415 None:intergenic
TCAGTTTCATGGACGGTAGC+GGG 0.529051 4_1:+73753650 None:intergenic
TCTGACCAGGATTCACCAAA+TGG 0.530338 4_1:+73753158 None:intergenic
CAACCTTGCAGGCTCAGAGA+TGG 0.530486 4_1:+73751610 None:intergenic
GCACCATTACATAGAGAGTC+GGG 0.531421 4_1:-73753965 Msa0571200:CDS
GGAGAATCTCTTAGTCATGA+AGG 0.533330 4_1:-73752210 Msa0571200:CDS
CAAATTCACCCTTAGCAACC+TGG 0.533831 4_1:+73751962 None:intergenic
CTAAACATATTAGTAATGAT+AGG 0.535909 4_1:-73753202 Msa0571200:CDS
TACAAGATTCTCTGTTGCCA+TGG 0.536293 4_1:+73752538 None:intergenic
AGTCTTCGAAGATACTGCTT+GGG 0.536936 4_1:-73752932 Msa0571200:CDS
AACCTTGCAGGCTCAGAGAT+GGG 0.537883 4_1:+73751611 None:intergenic
TACTCAAGAGCTTTATCAGA+AGG 0.538192 4_1:+73753440 None:intergenic
ACTTGGTTTAATGGCACACT+TGG 0.538980 4_1:+73756675 None:intergenic
TGCCAAATAATGAGTTGTAT+GGG 0.541119 4_1:-73753037 Msa0571200:CDS
AGGAAAATTTAGCAGTTCAA+GGG 0.541169 4_1:-73751792 Msa0571200:CDS
AGAGAATCTTGTAGTCATGA+AGG 0.541432 4_1:-73752528 Msa0571200:CDS
TGGCCGATGTTAACAACTCA+AGG 0.544179 4_1:-73754588 Msa0571200:CDS
ATCAGTTTCATGGACGGTAG+CGG 0.547328 4_1:+73753649 None:intergenic
TCCAGTAAGAAGAAAGAGCC+CGG 0.547845 4_1:-73754151 Msa0571200:CDS
GACTGGCTGGATCTGAACCC+AGG 0.548529 4_1:-73754105 Msa0571200:CDS
GCAATTCGTTCATTTCTCCA+TGG 0.550063 4_1:-73759902 Msa0571200:five_prime_UTR
TGGAATACATATCCACTCAC+TGG 0.551219 4_1:+73756742 None:intergenic
ATGTTAACAACTCAAGGAAA+GGG 0.551542 4_1:-73754582 Msa0571200:CDS
AGACACATGACGAGTAAGCT+TGG 0.552905 4_1:+73753328 None:intergenic
GAACCTGTTAACTGTCATGA+TGG 0.554557 4_1:-73751760 Msa0571200:CDS
AACTGGGAATATTGTTGTTG+CGG 0.554594 4_1:+73751574 None:intergenic
GTTAAAAGTACAGTTGCAGT+GGG 0.555405 4_1:+73753389 None:intergenic
TTGAATGCAAATTCCAAGCA+TGG 0.555831 4_1:+73753134 None:intergenic
AAGCTGACGAGCGTCCTGAA+TGG 0.556410 4_1:-73758915 Msa0571200:CDS
AAATAACCAGGTTGCTGAGG+GGG 0.556834 4_1:-73752610 Msa0571200:CDS
CTGTTAACTGTCATGATGGA+GGG 0.557709 4_1:-73751756 Msa0571200:CDS
GAAACTAAAACGTTAAACAA+TGG 0.559589 4_1:-73752237 Msa0571200:CDS
GCATTCTCCAAACAAGGAGG+AGG 0.559672 4_1:-73757969 Msa0571200:CDS
AATCTGGAGGAACCAACAAA+CGG 0.560339 4_1:-73759091 Msa0571200:CDS
TAAATGCAAATTCTAAGCAT+GGG 0.560755 4_1:+73751842 None:intergenic
AACGTTACAGTTTGAAATGG+CGG 0.562874 4_1:+73751922 None:intergenic
CTAATTGAGAAGTAATTCCA+TGG 0.564147 4_1:+73759885 None:intergenic
AGCTGAATTGCAACTAAGTG+AGG 0.565303 4_1:-73754017 Msa0571200:CDS
TGAATGGTTGCCTAATGGCT+GGG 0.565873 4_1:-73758899 Msa0571200:CDS
AAAGTTTCGACTCCTAGTGT+TGG 0.568857 4_1:-73753065 Msa0571200:CDS
TCATTTCACTTTGACACAGG+AGG 0.569150 4_1:-73751676 Msa0571200:CDS
TAGAACCCGACAAAGTGGTC+CGG 0.570129 4_1:-73758866 Msa0571200:CDS
TAACATGCATTCTCCAAACA+AGG 0.572397 4_1:-73757846 Msa0571200:CDS
GATGTTAACAACTCAAGGAA+AGG 0.573089 4_1:-73754583 Msa0571200:CDS
TGGAGGATCTACCACCTGGA+TGG 0.573332 4_1:-73757040 Msa0571200:CDS
AGTCGCTTTGACAACCGCAT+AGG 0.573354 4_1:+73753488 None:intergenic
TTTCTTCCCCACCATAGAGA+TGG 0.573652 4_1:+73753351 None:intergenic
GTCGCTTTGACAACCGCATA+GGG 0.575031 4_1:+73753489 None:intergenic
TCAATTTCAGGGACTGTAGA+GGG 0.575144 4_1:+73753746 None:intergenic
AATGTGTCTAAATTAGCCAC+TGG 0.575361 4_1:-73752132 Msa0571200:CDS
AACTGTCATGATGGAGGGGA+TGG 0.576525 4_1:-73751751 Msa0571200:CDS
AGTTAAAAGTACAGTTGCAG+TGG 0.577236 4_1:+73753388 None:intergenic
GCATCTAACCATCTCTATGG+TGG 0.578703 4_1:-73753359 Msa0571200:CDS
GGTACATTGGATCAACCACC+GGG 0.579078 4_1:-73752582 Msa0571200:CDS
TTTGGCAGTTCACCAACACT+AGG 0.579154 4_1:+73753053 None:intergenic
TTGAGGTCTAGCTCCACACC+TGG 0.579298 4_1:-73752801 Msa0571200:CDS
GAATTGCAACTAAGTGAGGG+TGG 0.580593 4_1:-73754013 Msa0571200:CDS
ATCCTGGTCAGATCCATGCT+TGG 0.581250 4_1:-73753147 Msa0571200:CDS
TTTCCTTGAGTTGTTAACAT+CGG 0.581383 4_1:+73754585 None:intergenic
TTGAATATCAGTTTCATGGA+CGG 0.582377 4_1:+73753643 None:intergenic
CATTTCACTTTGACACAGGA+GGG 0.582652 4_1:-73751675 Msa0571200:CDS
TACGCTTTAGTTTCAAAACC+CGG 0.583891 4_1:+73752564 None:intergenic
TGCACCATTACATAGAGAGT+CGG 0.584390 4_1:-73753966 Msa0571200:CDS
TATGCAATCAATACCCTCAC+GGG 0.584830 4_1:-73753806 Msa0571200:CDS
TGCTTGGGCAACCTGAGTTG+AGG 0.584991 4_1:-73752917 Msa0571200:CDS
TGGTGCATGGTCTGTAAGCT+TGG 0.585017 4_1:+73753982 None:intergenic
TACAGGTGTGATTCCAGTAG+AGG 0.585100 4_1:-73751812 Msa0571200:CDS
CATTCTCCAAACAAGGAGGA+GGG 0.587111 4_1:-73757968 Msa0571200:CDS
ACCTGCTGCAGACAAACAAG+TGG 0.588791 4_1:-73753912 Msa0571200:CDS
ATTGTGGAGGATCTACCACC+TGG 0.589100 4_1:-73757044 Msa0571200:CDS
ACTCTCTATGTAATGGTGCA+TGG 0.590005 4_1:+73753969 None:intergenic
ACTCAAGAGCTTTATCAGAA+GGG 0.590425 4_1:+73753441 None:intergenic
TTCCAAGCATGGATCTGACC+AGG 0.591151 4_1:+73753145 None:intergenic
TTATGCAATCAATACCCTCA+CGG 0.592881 4_1:-73753807 Msa0571200:CDS
ATGATGTCAATGTGAGCCAT+CGG 0.593372 4_1:-73754465 Msa0571200:CDS
TGGTTGCTCTTGATACCTCA+GGG 0.594405 4_1:-73754531 Msa0571200:CDS
ATCTAACCATCTCTATGGTG+GGG 0.594533 4_1:-73753357 Msa0571200:CDS
TAACCAGCATTCTCCAAGCA+AGG 0.595724 4_1:-73757885 Msa0571200:CDS
AAAACGTTAAACAATGGCAA+TGG 0.596651 4_1:-73752231 Msa0571200:CDS
GCGACTATGAGATTCTCCAT+TGG 0.596695 4_1:+73752857 None:intergenic
GATATGGAGTTCATCAGCCT+GGG 0.597149 4_1:+73754088 None:intergenic
AAATCATCTCAGCATTTCAA+GGG 0.598277 4_1:-73754313 Msa0571200:CDS
TGCAGGCTCAGAGATGGGAA+TGG 0.600438 4_1:+73751616 None:intergenic
TTATCTCTTTCTAGTTGACG+TGG 0.601270 4_1:+73754217 None:intergenic
AATATGCCTAAATTCACCAA+TGG 0.602518 4_1:-73752873 Msa0571200:CDS
ACTTGCTGGCATTGAACCGG+AGG 0.603999 4_1:-73753468 Msa0571200:CDS
CCTGTTAACTGTCATGATGG+AGG 0.606160 4_1:-73751757 Msa0571200:CDS
GAAACTAAAGCGTATAACCA+TGG 0.606590 4_1:-73752555 Msa0571200:CDS
ATTCTCCAAACAAGGAGGAG+GGG 0.607464 4_1:-73757967 Msa0571200:CDS
GAATGTGCCATCTCGAATGA+TGG 0.609217 4_1:-73754551 Msa0571200:CDS
CTTCCAAATGTAAAAGCACA+AGG 0.609245 4_1:-73754054 Msa0571200:CDS
ATGATTATGAGATTCTCGAA+TGG 0.609264 4_1:+73752440 None:intergenic
TAAGCAGCATTCTCCAAGCA+AGG 0.610399 4_1:-73757930 Msa0571200:CDS
AACATGCATTCTCCAAACAA+GGG 0.610756 4_1:-73757845 Msa0571200:CDS
CCAGTCTCCGTGAAAACCGA+TGG 0.611124 4_1:+73754449 None:intergenic
CAGCATGCATTCTCCAAGCA+AGG 0.612883 4_1:-73757807 Msa0571200:CDS
TGGTGTTGAACCTGTCAAGT+TGG 0.614025 4_1:-73754425 Msa0571200:CDS
GTTACAGTTTGAAATGGCGG+TGG 0.614827 4_1:+73751925 None:intergenic
GAAGTTAGAACCCGACAAAG+TGG 0.615611 4_1:-73758871 Msa0571200:CDS
AGGCGAGAATTCCATTGTGG+AGG 0.616015 4_1:-73757057 Msa0571200:CDS
TTATATGCAGATCCCATAGC+CGG 0.616036 4_1:+73758847 None:intergenic
GGAATCTGGAACCTGTGTTG+AGG 0.619326 4_1:-73752494 Msa0571200:CDS
AGTTTGAAAGCAGAAGTGCT+AGG 0.621435 4_1:-73753302 Msa0571200:CDS
ATCATGAAGAGAACATGATG+AGG 0.621582 4_1:-73752740 Msa0571200:CDS
TAAGGGTGAATTTGGTACAT+CGG 0.622183 4_1:-73751953 Msa0571200:CDS
TGAGGGTGAATTTGGTACAT+CGG 0.622460 4_1:-73752277 Msa0571200:CDS
GGAGAATCATCAAGAAAGTG+TGG 0.623687 4_1:-73753281 Msa0571200:CDS
GTAGAGGGTCCCTTATCAAG+AGG 0.624279 4_1:+73753761 None:intergenic
TGGTGGTAACACACCCGTGA+GGG 0.625772 4_1:+73753793 None:intergenic
GGAATCTGGAACCTGTGTTG+AGG 0.626333 4_1:-73752818 Msa0571200:CDS
AATCGAGCAACCAAACGCAA+TGG 0.628532 4_1:-73754281 Msa0571200:CDS
AAGATTCGGAAGCACAGAAG+TGG 0.628849 4_1:-73757005 Msa0571200:CDS
AAGGAGCTAGTCCTCAACTC+AGG 0.630553 4_1:+73752906 None:intergenic
TAGCAAGCATTCTCCAAACA+AGG 0.631214 4_1:-73757975 Msa0571200:CDS
TTGTTTGACAACGTTACTAG+AGG 0.631495 4_1:-73753614 Msa0571200:CDS
TGGGAGAGTGACAACCAGCA+TGG 0.632248 4_1:-73753018 Msa0571200:CDS
AGAGCAACCATCATTCGAGA+TGG 0.634631 4_1:+73754544 None:intergenic
TGACAATGTGATTAATGATG+AGG 0.636184 4_1:-73754401 Msa0571200:CDS
TGCAGGCGAGAATTCCATTG+TGG 0.639433 4_1:-73757060 Msa0571200:CDS
ACATGCATTCTCCAAACAAG+GGG 0.641967 4_1:-73757844 Msa0571200:CDS
GTCATGAAGGCAACAACATG+AGG 0.643679 4_1:-73752197 Msa0571200:CDS
TGATACCCAAACTGTTCACA+AGG 0.643981 4_1:-73753249 Msa0571200:CDS
ATGCATTCTCCAAGCAAGGA+CGG 0.644558 4_1:-73757803 Msa0571200:CDS
AATTGCAACTAAGTGAGGGT+GGG 0.644736 4_1:-73754012 Msa0571200:CDS
ACTGCAACTCAGTATTGTCG+TGG 0.650157 4_1:+73751896 None:intergenic
TCAAGAGGATTATCAACTGG+TGG 0.650451 4_1:+73753776 None:intergenic
GCTGAATTGCAACTAAGTGA+GGG 0.654401 4_1:-73754016 Msa0571200:CDS
GGAACCTGGAACCTGTGTTG+AGG 0.657171 4_1:-73752176 Msa0571200:CDS
ATATGTATTCCATTCCAAGA+AGG 0.660953 4_1:-73756731 Msa0571200:CDS
AGGTGGTAGATCCTCCACAA+TGG 0.665682 4_1:+73757046 None:intergenic
TTGGGTCAGACCAAGAGTAG+TGG 0.666010 4_1:+73753837 None:intergenic
TGTTAACTGTCATGATGGAG+GGG 0.666653 4_1:-73751755 Msa0571200:CDS
CAGGAGGGAAGTCCATGCCA+GGG 0.676123 4_1:-73751660 Msa0571200:CDS
CCAAGAGTAGTGGAATGCAA+AGG 0.680360 4_1:+73753847 None:intergenic
GTGACTATGAAATTCTCCAG+TGG 0.680600 4_1:+73752116 None:intergenic
GGGGAGCTAGTCCTCAACAC+AGG 0.684626 4_1:+73752165 None:intergenic
GTGGAGCTAGTCCTCAACAC+AGG 0.684626 4_1:+73752483 None:intergenic
TGGAATGCAAAGGACAGTTG+AGG 0.692734 4_1:+73753857 None:intergenic
ATGATTGTGAGATTCTTGAG+TGG 0.696127 4_1:+73752758 None:intergenic
CTGGTGGTAACACACCCGTG+AGG 0.700134 4_1:+73753792 None:intergenic
GCAGCATTCTCCAAGCAAGG+AGG 0.711520 4_1:-73757927 Msa0571200:CDS
CCAGCATTCTCCAAGCAAGG+AGG 0.712170 4_1:-73757882 Msa0571200:CDS
CAAATTCTACTCCAAACCTG+AGG 0.713388 4_1:-73758059 Msa0571200:CDS
GTGGAGCTAGACCTCAACAC+AGG 0.721025 4_1:+73752807 None:intergenic
ACTTCTTTAATCCATCCAGG+TGG 0.722254 4_1:+73757029 None:intergenic
AAAATAACCAGGTTGCTGAG+GGG 0.724962 4_1:-73752611 Msa0571200:CDS
CAAGCATTCTCCAAACAAGG+AGG 0.726483 4_1:-73757972 Msa0571200:CDS
GGTTGCTCTTGATACCTCAG+GGG 0.734372 4_1:-73754530 Msa0571200:CDS
GAAAATTTAGCAGTTCAAGG+GGG 0.735832 4_1:-73751790 Msa0571200:CDS
AAGAGGTCAAAGTCCCTATG+CGG 0.737397 4_1:-73753502 Msa0571200:CDS
GCTTTAGTTTCAAAACCCGG+TGG 0.754863 4_1:+73752567 None:intergenic
CATGCATTCTCCAAACAAGG+GGG 0.763333 4_1:-73757843 Msa0571200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAAAATAAATATATTTTA+GGG - chr4_1:73756820-73756839 Msa0571200:intron 0.0%
!!! ATCTTGTAATTTATTTTTTT+TGG - chr4_1:73752133-73752152 Msa0571200:CDS 10.0%
!! TAAAATTTATTCATAATACA+AGG + chr4_1:73752935-73752954 None:intergenic 10.0%
!! TATTAAGAAATTAAAAAAGA+TGG - chr4_1:73754656-73754675 Msa0571200:intron 10.0%
!!! TTTAATTTGTCTTTCTTTTA+TGG - chr4_1:73751978-73751997 Msa0571200:CDS 15.0%
!!! TATTATTTCTTGTTCAAATA+TGG - chr4_1:73752011-73752030 Msa0571200:CDS 15.0%
!!! TATTTTTTTTGGTAGTAAAA+TGG - chr4_1:73752144-73752163 Msa0571200:CDS 15.0%
!! CAACTTCTAATAATAATTAA+AGG + chr4_1:73754408-73754427 None:intergenic 15.0%
!! TTTAAAAACCACAAAAATTA+AGG + chr4_1:73755061-73755080 None:intergenic 15.0%
!! AAAATGACAAGTAAAAAAAA+CGG + chr4_1:73755087-73755106 None:intergenic 15.0%
!!! AAATATTTTCACAAAGTAAA+CGG - chr4_1:73755820-73755839 Msa0571200:intron 15.0%
!!! GTTTTTTAATACAGTTTATT+GGG + chr4_1:73756005-73756024 None:intergenic 15.0%
!! AACATAAAAAATAACTAACA+TGG + chr4_1:73756078-73756097 None:intergenic 15.0%
!!! AATTCTTGTTATTAAGATAA+AGG - chr4_1:73756366-73756385 Msa0571200:intron 15.0%
!!! TTCAAATCATATTTGAATTT+TGG + chr4_1:73756454-73756473 None:intergenic 15.0%
!! TTGAAAATTATTATTGAACT+GGG + chr4_1:73759996-73760015 None:intergenic 15.0%
!! TTTGAAAATTATTATTGAAC+TGG + chr4_1:73759997-73760016 None:intergenic 15.0%
!!! TCAATAATAATTTTCAAAGA+CGG - chr4_1:73759999-73760018 Msa0571200:five_prime_UTR 15.0%
!! AAACAGTATTAAGAGTAAAA+TGG + chr4_1:73751738-73751757 None:intergenic 20.0%
!!! TTCATTATTGATGATTTGTT+TGG - chr4_1:73751814-73751833 Msa0571200:CDS 20.0%
!!! TCATTATTGATGATTTGTTT+GGG - chr4_1:73751815-73751834 Msa0571200:CDS 20.0%
!! TGTCAAATAGAAAACAAATT+TGG + chr4_1:73752397-73752416 None:intergenic 20.0%
!!! ACATTAGTTTGTATTTGTAA+TGG - chr4_1:73753146-73753165 Msa0571200:CDS 20.0%
!! ATAGAAAATAAATACCAACA+AGG + chr4_1:73753230-73753249 None:intergenic 20.0%
!! TATGTAATTAACTATTGAAG+AGG + chr4_1:73753321-73753340 None:intergenic 20.0%
!! TTCAATAGTTAATTACATAC+TGG - chr4_1:73753322-73753341 Msa0571200:CDS 20.0%
!!! AAAGTTTCTTTTAAATGTTC+TGG - chr4_1:73753368-73753387 Msa0571200:CDS 20.0%
!! TAGAATTTGTATGTATTTGA+TGG + chr4_1:73753481-73753500 None:intergenic 20.0%
!! AACAAGTAAAGTAAACAAAA+CGG + chr4_1:73753991-73754010 None:intergenic 20.0%
!!! ATGCTGTTCTAAAATAAAAA+TGG - chr4_1:73754103-73754122 Msa0571200:CDS 20.0%
!!! TTTTGTGATTTTTGTATACT+TGG - chr4_1:73754257-73754276 Msa0571200:CDS 20.0%
!!! TTTGTGATTTTTGTATACTT+GGG - chr4_1:73754258-73754277 Msa0571200:CDS 20.0%
!!! TAATGCATATGTGTTTTTAT+GGG - chr4_1:73754303-73754322 Msa0571200:CDS 20.0%
!!! TTTTTATGGGGAAAAAAAAA+AGG - chr4_1:73754316-73754335 Msa0571200:CDS 20.0%
!!! GATTTCATGATATTGATTAT+TGG - chr4_1:73754365-73754384 Msa0571200:CDS 20.0%
!! TAATTATTATTAGAAGTTGC+TGG - chr4_1:73754409-73754428 Msa0571200:CDS 20.0%
!!! AATTTCTTTTTATGTTTTGC+TGG - chr4_1:73754591-73754610 Msa0571200:CDS 20.0%
!!! CTTTTTTAAACAGTAATTGT+AGG + chr4_1:73754734-73754753 None:intergenic 20.0%
!! ATACTTAAACAAATTATGAC+TGG - chr4_1:73754758-73754777 Msa0571200:intron 20.0%
!! TACTTAAACAAATTATGACT+GGG - chr4_1:73754759-73754778 Msa0571200:intron 20.0%
!! TCCATACAATGATAATTAAA+TGG - chr4_1:73755170-73755189 Msa0571200:intron 20.0%
!! ACCATTTAATTATCATTGTA+TGG + chr4_1:73755174-73755193 None:intergenic 20.0%
!!! TGTGTCATTAATTTCATTTT+CGG + chr4_1:73755256-73755275 None:intergenic 20.0%
!! AAAATGAAATTAATGACACA+TGG - chr4_1:73755256-73755275 Msa0571200:intron 20.0%
!! ATTGAAATAAACTATTGTGA+TGG - chr4_1:73755630-73755649 Msa0571200:intron 20.0%
!!! AATATTTTCACAAAGTAAAC+GGG - chr4_1:73755821-73755840 Msa0571200:intron 20.0%
!!! CGTTTTTTAATACAGTTTAT+TGG + chr4_1:73756006-73756025 None:intergenic 20.0%
!!! TTTAAAAACGTTTACACTTT+TGG - chr4_1:73756096-73756115 Msa0571200:intron 20.0%
!!! TAATTTTGATGTTACTTTGA+TGG - chr4_1:73756212-73756231 Msa0571200:intron 20.0%
!! ATGTAATTTACCTTTATGAA+TGG - chr4_1:73756292-73756311 Msa0571200:intron 20.0%
!!! TTTTTTTCTCCAATTATTGT+TGG - chr4_1:73756477-73756496 Msa0571200:intron 20.0%
!! AGAAAATTACCAACAATAAT+TGG + chr4_1:73756489-73756508 None:intergenic 20.0%
!!! TTTTTTCTCAAGTTTCTTTT+TGG + chr4_1:73757187-73757206 None:intergenic 20.0%
!!! GTTTTAGAATATCAATTTCA+GGG + chr4_1:73757819-73757838 None:intergenic 20.0%
!! CAAAACATTTCAGTTTATAA+TGG - chr4_1:73757877-73757896 Msa0571200:CDS 20.0%
!!! TTTTTTGAATATCAGTTTCA+TGG + chr4_1:73757915-73757934 None:intergenic 20.0%
!! CTAAACATATTAGTAATGAT+AGG - chr4_1:73758349-73758368 Msa0571200:intron 20.0%
!!! TGAATTTAGGCATATTTTTT+CGG + chr4_1:73758674-73758693 None:intergenic 20.0%
!!! TTTTTATCTTCAACATATAG+AGG + chr4_1:73759170-73759189 None:intergenic 20.0%
! ATGGAATTACTTCTCAATTA+GGG - chr4_1:73751668-73751687 Msa0571200:CDS 25.0%
! ACGAAATGGATAATAATTGA+AGG + chr4_1:73751790-73751809 None:intergenic 25.0%
! CAATAATGAAGAAAACGAAA+TGG + chr4_1:73751804-73751823 None:intergenic 25.0%
! TGGTAGTAAAATGGTAAAAT+TGG - chr4_1:73752153-73752172 Msa0571200:CDS 25.0%
! GGTAGTAAAATGGTAAAATT+GGG - chr4_1:73752154-73752173 Msa0571200:CDS 25.0%
! GTAGTAAAATGGTAAAATTG+GGG - chr4_1:73752155-73752174 Msa0571200:CDS 25.0%
! AAACCAAACGTTAAAAAATC+TGG - chr4_1:73752444-73752463 Msa0571200:CDS 25.0%
!!! TGAAGACTTTTTTCTTTTCT+AGG - chr4_1:73752533-73752552 Msa0571200:CDS 25.0%
!!! GAAGACTTTTTTCTTTTCTA+GGG - chr4_1:73752534-73752553 Msa0571200:CDS 25.0%
! AAGAACTAACTATTGAAAAC+TGG + chr4_1:73752814-73752833 None:intergenic 25.0%
!! ATACTGGCTATTATCAAAAA+GGG - chr4_1:73753338-73753357 Msa0571200:CDS 25.0%
!! TAAAGATAGAAAAGGTATAG+AGG + chr4_1:73753815-73753834 None:intergenic 25.0%
! AAGAAAGGTAAAGATAGAAA+AGG + chr4_1:73753823-73753842 None:intergenic 25.0%
! GATAACAAACAGAAAAAGAA+AGG + chr4_1:73753838-73753857 None:intergenic 25.0%
! GAATGGATCTTTAAATTTGA+TGG + chr4_1:73753872-73753891 None:intergenic 25.0%
! GTAATGAATAGTGATAAGAA+TGG + chr4_1:73753889-73753908 None:intergenic 25.0%
! AATTGTGATGTCATAGAATA+GGG + chr4_1:73753911-73753930 None:intergenic 25.0%
! TAATTGTGATGTCATAGAAT+AGG + chr4_1:73753912-73753931 None:intergenic 25.0%
!!! ATAAAATTCTAGGATGATAC+TGG + chr4_1:73753963-73753982 None:intergenic 25.0%
!! AGTATCATCCTAGAATTTTA+TGG - chr4_1:73753962-73753981 Msa0571200:CDS 25.0%
! TTGTTGTAAAGAAAGAATCA+TGG - chr4_1:73754006-73754025 Msa0571200:CDS 25.0%
! TTGTAAGTATTTCACGTTAT+AGG - chr4_1:73754191-73754210 Msa0571200:CDS 25.0%
! TGTAAGTATTTCACGTTATA+GGG - chr4_1:73754192-73754211 Msa0571200:CDS 25.0%
!!! CTAATGCATATGTGTTTTTA+TGG - chr4_1:73754302-73754321 Msa0571200:CDS 25.0%
!!! AATGCATATGTGTTTTTATG+GGG - chr4_1:73754304-73754323 Msa0571200:CDS 25.0%
! GGATTAAAGAAGTAAAGATT+CGG - chr4_1:73754532-73754551 Msa0571200:CDS 25.0%
!! CTTAATAAAAACCTCCTTTT+TGG + chr4_1:73754643-73754662 None:intergenic 25.0%
! TTGTCAATCTTTCAACAATT+TGG + chr4_1:73755002-73755021 None:intergenic 25.0%
!!! CTTGTCATTTTGATAGTTTA+AGG - chr4_1:73755096-73755115 Msa0571200:intron 25.0%
! AGATGATTAATGAGAGATAT+GGG + chr4_1:73755141-73755160 None:intergenic 25.0%
! AAGATGATTAATGAGAGATA+TGG + chr4_1:73755142-73755161 None:intergenic 25.0%
! AAAGTTTGAAGATGAATTTG+TGG - chr4_1:73755197-73755216 Msa0571200:intron 25.0%
! GCTAAACATGAAAAATAAAG+CGG - chr4_1:73755359-73755378 Msa0571200:intron 25.0%
! CTAAACATGAAAAATAAAGC+GGG - chr4_1:73755360-73755379 Msa0571200:intron 25.0%
! TAAACATGAAAAATAAAGCG+GGG - chr4_1:73755361-73755380 Msa0571200:intron 25.0%
! TAGGTGATTATATATTCTCT+TGG + chr4_1:73755400-73755419 None:intergenic 25.0%
!! AGCTAAAAACAATTCAAGTT+AGG - chr4_1:73755444-73755463 Msa0571200:intron 25.0%
!! ATATTTTCACAAAGTAAACG+GGG - chr4_1:73755822-73755841 Msa0571200:intron 25.0%
!!! TTATTTTTTTTCGATCGCAT+AGG + chr4_1:73755848-73755867 None:intergenic 25.0%
! ATGCGATCGAAAAAAAATAA+AGG - chr4_1:73755848-73755867 Msa0571200:intron 25.0%
! AGATGTTAAATTGATGAAGT+GGG - chr4_1:73755924-73755943 Msa0571200:intron 25.0%
!!! TTCAGTTTTATCTAAGATTG+TGG + chr4_1:73756181-73756200 None:intergenic 25.0%
!!! AGAATCACTAGATTTGTTTT+GGG + chr4_1:73756410-73756429 None:intergenic 25.0%
!!! AAGAATCACTAGATTTGTTT+TGG + chr4_1:73756411-73756430 None:intergenic 25.0%
!! AACATAAGCATGCTATTTAA+TGG - chr4_1:73756632-73756651 Msa0571200:intron 25.0%
!! ACATAAGCATGCTATTTAAT+GGG - chr4_1:73756633-73756652 Msa0571200:intron 25.0%
! GTGAATAATTTCGTTATTCT+TGG - chr4_1:73756704-73756723 Msa0571200:CDS 25.0%
! AAAGTTGAAATACAAAGAAG+CGG + chr4_1:73756907-73756926 None:intergenic 25.0%
!!! GGTTTTAGAATATCAATTTC+AGG + chr4_1:73757820-73757839 None:intergenic 25.0%
!!! GAATTTAGGCATATTTTTTC+GGG + chr4_1:73758673-73758692 None:intergenic 25.0%
!! TTTTCATCTTCAACAAATAG+AGG + chr4_1:73758852-73758871 None:intergenic 25.0%
!!! ACCTGGTTATTTTTCTTTAA+TGG + chr4_1:73758933-73758952 None:intergenic 25.0%
!! AGCATAATGAGAAATTTGTT+TGG - chr4_1:73759140-73759159 Msa0571200:intron 25.0%
!!! ACCTGATCATTTTTCTTTAA+TGG + chr4_1:73759251-73759270 None:intergenic 25.0%
! GAAACTAAAACGTTAAACAA+TGG - chr4_1:73759314-73759333 Msa0571200:intron 25.0%
!! AACATAATGATGAGTTTGTT+TGG - chr4_1:73759464-73759483 Msa0571200:intron 25.0%
! TTTAACGTTACAGTTTGAAA+TGG + chr4_1:73759635-73759654 None:intergenic 25.0%
!! GTGAATCTTTTATGAATTCT+TGG - chr4_1:73759681-73759700 Msa0571200:intron 25.0%
! TAAATGCAAATTCTAAGCAT+GGG + chr4_1:73759712-73759731 None:intergenic 25.0%
! TTAAATGCAAATTCTAAGCA+TGG + chr4_1:73759713-73759732 None:intergenic 25.0%
!!! CGATTATTGGTTTTTTGTGA+GGG + chr4_1:73751623-73751642 None:intergenic 30.0%
CCTCACAAAAAACCAATAAT+CGG - chr4_1:73751621-73751640 Msa0571200:CDS 30.0%
CTAATTGAGAAGTAATTCCA+TGG + chr4_1:73751669-73751688 None:intergenic 30.0%
CATGGAATTACTTCTCAATT+AGG - chr4_1:73751667-73751686 Msa0571200:CDS 30.0%
TGGATGAAGAAGTAAATTGA+TGG - chr4_1:73751842-73751861 Msa0571200:CDS 30.0%
ATAGAAATGAATCTAGACAC+AGG + chr4_1:73751903-73751922 None:intergenic 30.0%
TTTCTTGTTCAAATATGGTG+AGG - chr4_1:73752016-73752035 Msa0571200:CDS 30.0%
TAAATTAAACGTGTCAGTGT+CGG - chr4_1:73752256-73752275 Msa0571200:CDS 30.0%
! AGGTTAGAATACATGTTTTC+TGG - chr4_1:73752305-73752324 Msa0571200:CDS 30.0%
!! AATACATGTTTTCTGGTAGA+GGG - chr4_1:73752312-73752331 Msa0571200:CDS 30.0%
!! ATAAGCTGCCTTTTTGAAAA+TGG - chr4_1:73752419-73752438 Msa0571200:CDS 30.0%
!! TAAGCTGCCTTTTTGAAAAT+GGG - chr4_1:73752420-73752439 Msa0571200:CDS 30.0%
! TGGTTTTCCCATTTTCAAAA+AGG + chr4_1:73752430-73752449 None:intergenic 30.0%
ACTTTGCATGTAGACTTAAA+AGG + chr4_1:73752898-73752917 None:intergenic 30.0%
!! ATGCAAAGTTCTAAAGTTTC+TGG - chr4_1:73752909-73752928 Msa0571200:CDS 30.0%
! ATGTTCACGACTTTAACTTA+TGG - chr4_1:73753013-73753032 Msa0571200:CDS 30.0%
!!! TTTTTTTCTTCCCATGTGTA+TGG - chr4_1:73753059-73753078 Msa0571200:CDS 30.0%
TGTCAAAAGTTGTCCTAAAT+CGG - chr4_1:73753084-73753103 Msa0571200:CDS 30.0%
AATACAAACTAATGTGAGCA+TGG + chr4_1:73753141-73753160 None:intergenic 30.0%
TATTGATATGCCTGAAAAGT+TGG + chr4_1:73753267-73753286 None:intergenic 30.0%
! CATACTGGCTATTATCAAAA+AGG - chr4_1:73753337-73753356 Msa0571200:CDS 30.0%
ACGACATCTTGAAACTATAA+AGG - chr4_1:73753519-73753538 Msa0571200:CDS 30.0%
! TATAAGTTTAGAACTGTGTC+TGG - chr4_1:73753930-73753949 Msa0571200:CDS 30.0%
! ATCATCCTAGAATTTTATGG+CGG - chr4_1:73753965-73753984 Msa0571200:CDS 30.0%
TCATTGTGTTTGTACTTACA+GGG + chr4_1:73754043-73754062 None:intergenic 30.0%
TTCATTGTGTTTGTACTTAC+AGG + chr4_1:73754044-73754063 None:intergenic 30.0%
TAAAAATTAGGCCTTAAGCT+GGG + chr4_1:73754133-73754152 None:intergenic 30.0%
ATAAAAATTAGGCCTTAAGC+TGG + chr4_1:73754134-73754153 None:intergenic 30.0%
! CTTAAGGCCTAATTTTTATG+TGG - chr4_1:73754135-73754154 Msa0571200:CDS 30.0%
!!! TTTTAGTTTTGCTATGCTCT+AGG - chr4_1:73754467-73754486 Msa0571200:CDS 30.0%
TTTACTTCTTTAATCCATCC+AGG + chr4_1:73754528-73754547 None:intergenic 30.0%
AAGTGGCATAAAGAAAGATT+GGG - chr4_1:73754563-73754582 Msa0571200:CDS 30.0%
CTGGATCAATATAAAACTGT+TGG + chr4_1:73754793-73754812 None:intergenic 30.0%
! TTTTATATTGATCCAGTGAG+TGG - chr4_1:73754797-73754816 Msa0571200:CDS 30.0%
ATATGTATTCCATTCCAAGA+AGG - chr4_1:73754820-73754839 Msa0571200:intron 30.0%
TTGTCTTCTACTTGGTTTAA+TGG + chr4_1:73754888-73754907 None:intergenic 30.0%
TCTTGATATTGTCTTCTACT+TGG + chr4_1:73754896-73754915 None:intergenic 30.0%
AAAAGCAGCAATAATGAGAT+AGG + chr4_1:73754956-73754975 None:intergenic 30.0%
CACAAAAATTAAGGATCAGA+GGG + chr4_1:73755052-73755071 None:intergenic 30.0%
!!! TCGGAAGAAAGAAGTTTTTT+CGG + chr4_1:73755237-73755256 None:intergenic 30.0%
ATGAAATTAATGACACATGG+TGG - chr4_1:73755259-73755278 Msa0571200:intron 30.0%
TTGTATATGAGCAAGTTAGA+AGG - chr4_1:73755321-73755340 Msa0571200:intron 30.0%
TGTATATGAGCAAGTTAGAA+GGG - chr4_1:73755322-73755341 Msa0571200:intron 30.0%
AAACATGAAAAATAAAGCGG+GGG - chr4_1:73755362-73755381 Msa0571200:intron 30.0%
TTATCCATGACTGATAGTAT+AGG + chr4_1:73755419-73755438 None:intergenic 30.0%
GGAATAAATACCAGTAGTTA+CGG - chr4_1:73755465-73755484 Msa0571200:intron 30.0%
AGAAGATGAAATGCTAGTTA+GGG - chr4_1:73755655-73755674 Msa0571200:intron 30.0%
!!! GAACAATAGTGTGCATTTTT+TGG + chr4_1:73755733-73755752 None:intergenic 30.0%
GAGATGTTAAATTGATGAAG+TGG - chr4_1:73755923-73755942 Msa0571200:intron 30.0%
TGATGAAGTGGGTATATAAT+AGG - chr4_1:73755935-73755954 Msa0571200:intron 30.0%
ATATCAAACAAGCTAATCCT+TGG - chr4_1:73755965-73755984 Msa0571200:intron 30.0%
!!! CAGTTTATTGGGCATTTTTT+GGG + chr4_1:73755994-73756013 None:intergenic 30.0%
!!! ACAGTTTATTGGGCATTTTT+TGG + chr4_1:73755995-73756014 None:intergenic 30.0%
AATATGTAACAGAAGTGGAT+GGG + chr4_1:73756136-73756155 None:intergenic 30.0%
AAATATGTAACAGAAGTGGA+TGG + chr4_1:73756137-73756156 None:intergenic 30.0%
ACACAAATATGTAACAGAAG+TGG + chr4_1:73756141-73756160 None:intergenic 30.0%
! GTGGATTCTGGATATTATTT+TGG - chr4_1:73756238-73756257 Msa0571200:intron 30.0%
TCATACTTGACCATTCATAA+AGG + chr4_1:73756305-73756324 None:intergenic 30.0%
CATGGAAAGATAATGAGATT+TGG - chr4_1:73756339-73756358 Msa0571200:intron 30.0%
! TGTCCTTCACAAATTTTCAT+TGG - chr4_1:73756595-73756614 Msa0571200:intron 30.0%
ATGCCAATGAAAATTTGTGA+AGG + chr4_1:73756601-73756620 None:intergenic 30.0%
! CCAACAAAAATCTTTTGCAT+GGG + chr4_1:73756792-73756811 None:intergenic 30.0%
! ACCAACAAAAATCTTTTGCA+TGG + chr4_1:73756793-73756812 None:intergenic 30.0%
CATATTCTTCATCCTTAAGT+TGG + chr4_1:73756863-73756882 None:intergenic 30.0%
AAGTTGAAATACAAAGAAGC+GGG + chr4_1:73756906-73756925 None:intergenic 30.0%
! TTTCCTTGAGTTGTTAACAT+CGG + chr4_1:73756969-73756988 None:intergenic 30.0%
ATGTTAACAACTCAAGGAAA+GGG - chr4_1:73756969-73756988 Msa0571200:intron 30.0%
! GTTACTGTGATTCATTTTCA+AGG + chr4_1:73757050-73757069 None:intergenic 30.0%
!! CATCATTTTTGGATATGCTA+TGG + chr4_1:73757072-73757091 None:intergenic 30.0%
TGACAATGTGATTAATGATG+AGG - chr4_1:73757150-73757169 Msa0571200:intron 30.0%
AGAAAAAACAGAACTACTCT+AGG - chr4_1:73757199-73757218 Msa0571200:intron 30.0%
TAAATCATCTCAGCATTTCA+AGG - chr4_1:73757237-73757256 Msa0571200:intron 30.0%
AAATCATCTCAGCATTTCAA+GGG - chr4_1:73757238-73757257 Msa0571200:intron 30.0%
! TCTTCTTACTGGATTTGTTT+GGG + chr4_1:73757393-73757412 None:intergenic 30.0%
! TTCTTCTTACTGGATTTGTT+TGG + chr4_1:73757394-73757413 None:intergenic 30.0%
TTATCAAGAGGATTATCAAC+TGG + chr4_1:73757781-73757800 None:intergenic 30.0%
!! AGTTGATAATCCTCTTGATA+AGG - chr4_1:73757780-73757799 Msa0571200:CDS 30.0%
!! GTTGATAATCCTCTTGATAA+GGG - chr4_1:73757781-73757800 Msa0571200:CDS 30.0%
TTGAATATCAGTTTCATGGA+CGG + chr4_1:73757911-73757930 None:intergenic 30.0%
AAAATCCAAGAGAAAGAAAG+AGG - chr4_1:73758032-73758051 Msa0571200:CDS 30.0%
!! GCAACTGTACTTTTAACTAA+TGG - chr4_1:73758168-73758187 Msa0571200:intron 30.0%
TGCCAAATAATGAGTTGTAT+GGG - chr4_1:73758514-73758533 Msa0571200:intron 30.0%
!!! ATGAACTTTTTTATCCATGC+TGG + chr4_1:73758550-73758569 None:intergenic 30.0%
!!! ATTACGCTCTTTCTTGTTTT+CGG + chr4_1:73758589-73758608 None:intergenic 30.0%
! AAGAAAGAGCGTAATATGAA+TGG - chr4_1:73758594-73758613 Msa0571200:intron 30.0%
AATATGCCTAAATTCACCAA+TGG - chr4_1:73758678-73758697 Msa0571200:intron 30.0%
!!! AATTTAGACACACTTTTTCC+AGG + chr4_1:73758771-73758790 None:intergenic 30.0%
! AACATGATGAGGAATTTGTT+TGG - chr4_1:73758822-73758841 Msa0571200:intron 30.0%
GCCATTAAAGAAAAATAACC+AGG - chr4_1:73758929-73758948 Msa0571200:intron 30.0%
ATGATTATGAGATTCTCGAA+TGG + chr4_1:73759114-73759133 None:intergenic 30.0%
GCCATTAAAGAAAAATGATC+AGG - chr4_1:73759247-73759266 Msa0571200:intron 30.0%
!!! AACGTTTTAGTTTCAAAACC+TGG + chr4_1:73759308-73759327 None:intergenic 30.0%
AAAACGTTAAACAATGGCAA+TGG - chr4_1:73759320-73759339 Msa0571200:intron 30.0%
!!! TAGACACATTTTTTCCAGAT+GGG + chr4_1:73759409-73759428 None:intergenic 30.0%
!!! TTAGACACATTTTTTCCAGA+TGG + chr4_1:73759410-73759429 None:intergenic 30.0%
! TTTTCATCTTCAACATACAG+AGG + chr4_1:73759494-73759513 None:intergenic 30.0%
! TTTGCATTTAAGACTCTTAC+AGG - chr4_1:73759722-73759741 Msa0571200:intron 30.0%
AGGAAAATTTAGCAGTTCAA+GGG - chr4_1:73759759-73759778 Msa0571200:intron 30.0%
GAAATCACTTTGTGAAAAAC+TGG + chr4_1:73759855-73759874 None:intergenic 30.0%
! TTTTTGTGAGGGAGAAGAAA+AGG + chr4_1:73751612-73751631 None:intergenic 35.0%
!!! CCGATTATTGGTTTTTTGTG+AGG + chr4_1:73751624-73751643 None:intergenic 35.0%
!! TGGAAACTAGTCTTGAAGTT+AGG + chr4_1:73751718-73751737 None:intergenic 35.0%
!! TGATGATTTGTTTGGGAAAG+TGG - chr4_1:73751822-73751841 Msa0571200:CDS 35.0%
AGGGTCAACTTAGTCAAAAT+CGG + chr4_1:73752073-73752092 None:intergenic 35.0%
AAAAACTTGTCACTCCATGA+GGG + chr4_1:73752100-73752119 None:intergenic 35.0%
AAAAAACTTGTCACTCCATG+AGG + chr4_1:73752101-73752120 None:intergenic 35.0%
!!! CATGGAGTGACAAGTTTTTT+AGG - chr4_1:73752101-73752120 Msa0571200:CDS 35.0%
AAATTAAACGTGTCAGTGTC+GGG - chr4_1:73752257-73752276 Msa0571200:CDS 35.0%
TGTTTGTGTCAATGCTTCAT+AGG - chr4_1:73752285-73752304 Msa0571200:CDS 35.0%
!! GAATACATGTTTTCTGGTAG+AGG - chr4_1:73752311-73752330 Msa0571200:CDS 35.0%
TGGTAGAGGGAATGAATTAT+TGG - chr4_1:73752325-73752344 Msa0571200:CDS 35.0%
!!! CCTCCAGATTTTTTAACGTT+TGG + chr4_1:73752450-73752469 None:intergenic 35.0%
CCAAACGTTAAAAAATCTGG+AGG - chr4_1:73752447-73752466 Msa0571200:CDS 35.0%
TTCATTGTCAATCCGTTTGT+TGG + chr4_1:73752475-73752494 None:intergenic 35.0%
!!! GACTTTTTTCTTTTCTAGGG+AGG - chr4_1:73752537-73752556 Msa0571200:CDS 35.0%
ATTAGTGAAATGGATCTCTG+GGG + chr4_1:73752869-73752888 None:intergenic 35.0%
CATTAGTGAAATGGATCTCT+GGG + chr4_1:73752870-73752889 None:intergenic 35.0%
AAGGTCAACCATTAGTGAAA+TGG + chr4_1:73752879-73752898 None:intergenic 35.0%
! TTTTGACAGTCCATACACAT+GGG + chr4_1:73753072-73753091 None:intergenic 35.0%
! TGTGATTTTGTACTCCTTGT+TGG - chr4_1:73753213-73753232 Msa0571200:CDS 35.0%
! CTAATGTTGACCAACTTTTC+AGG - chr4_1:73753254-73753273 Msa0571200:CDS 35.0%
GATCAATGTAACACTGTAAC+AGG + chr4_1:73753459-73753478 None:intergenic 35.0%
TGCTCTTCCAATAAGAAGAA+AGG - chr4_1:73753550-73753569 Msa0571200:CDS 35.0%
TAACATGCATTCTCCAAACA+AGG - chr4_1:73753705-73753724 Msa0571200:CDS 35.0%
AACATGCATTCTCCAAACAA+GGG - chr4_1:73753706-73753725 Msa0571200:CDS 35.0%
! AGGCCTAATTTTTATGTGGT+TGG - chr4_1:73754139-73754158 Msa0571200:CDS 35.0%
! GGCCTAATTTTTATGTGGTT+GGG - chr4_1:73754140-73754159 Msa0571200:CDS 35.0%
GACCCAACCACATAAAAATT+AGG + chr4_1:73754145-73754164 None:intergenic 35.0%
GAAGTGGCATAAAGAAAGAT+TGG - chr4_1:73754562-73754581 Msa0571200:CDS 35.0%
AAAACGTTGTACATCCTTCT+TGG + chr4_1:73754837-73754856 None:intergenic 35.0%
! GTACAACGTTTTCTCAAATC+TGG - chr4_1:73754845-73754864 Msa0571200:intron 35.0%
AAGATTGACAAATTTGCAGC+TGG - chr4_1:73755011-73755030 Msa0571200:intron 35.0%
AGATTGACAAATTTGCAGCT+GGG - chr4_1:73755012-73755031 Msa0571200:intron 35.0%
CCACAAAAATTAAGGATCAG+AGG + chr4_1:73755053-73755072 None:intergenic 35.0%
! CCTCTGATCCTTAATTTTTG+TGG - chr4_1:73755050-73755069 Msa0571200:intron 35.0%
TGATTAATGAGAGATATGGG+CGG + chr4_1:73755138-73755157 None:intergenic 35.0%
!!! CGGAAGAAAGAAGTTTTTTC+GGG + chr4_1:73755236-73755255 None:intergenic 35.0%
GTATATGAGCAAGTTAGAAG+GGG - chr4_1:73755323-73755342 Msa0571200:intron 35.0%
ATCACCTATACTATCAGTCA+TGG - chr4_1:73755412-73755431 Msa0571200:intron 35.0%
AATATGCAAACCGTAACTAC+TGG + chr4_1:73755478-73755497 None:intergenic 35.0%
TACGGTTTGCATATTAGTGT+TGG - chr4_1:73755483-73755502 Msa0571200:intron 35.0%
! TTGGAAAGCTTTTGTTCTGA+GGG - chr4_1:73755502-73755521 Msa0571200:intron 35.0%
GAGAAGATGAAATGCTAGTT+AGG - chr4_1:73755654-73755673 Msa0571200:intron 35.0%
! AGTTAGGGATGATGCATTTT+TGG - chr4_1:73755670-73755689 Msa0571200:intron 35.0%
ATATGTAACAGAAGTGGATG+GGG + chr4_1:73756135-73756154 None:intergenic 35.0%
!! GATGTTACTTTGATGGATTG+TGG - chr4_1:73756219-73756238 Msa0571200:intron 35.0%
! GAATGGTCAAGTATGACTTT+TGG - chr4_1:73756309-73756328 Msa0571200:intron 35.0%
GTGAAGGACATTATTCAGTT+AGG + chr4_1:73756585-73756604 None:intergenic 35.0%
! CCCATGCAAAAGATTTTTGT+TGG - chr4_1:73756789-73756808 Msa0571200:intron 35.0%
! TAAGCTTTCAACTGGTTCTT+TGG + chr4_1:73756939-73756958 None:intergenic 35.0%
ACCAGTTGAAAGCTTAGAAT+TGG - chr4_1:73756943-73756962 Msa0571200:intron 35.0%
GATGTTAACAACTCAAGGAA+AGG - chr4_1:73756968-73756987 Msa0571200:intron 35.0%
! GCTCACATTGACATCATTTT+TGG + chr4_1:73757083-73757102 None:intergenic 35.0%
!! TTATCTCTTTCTAGTTGACG+TGG + chr4_1:73757337-73757356 None:intergenic 35.0%
!! TTTGGGTTGGTATGAAATTC+TGG + chr4_1:73757376-73757395 None:intergenic 35.0%
!!! ACATTTGGAAGCTTTTTCAC+AGG + chr4_1:73757488-73757507 None:intergenic 35.0%
! CTTCCAAATGTAAAAGCACA+AGG - chr4_1:73757497-73757516 Msa0571200:intron 35.0%
! AGACCTTGTGCTTTTACATT+TGG + chr4_1:73757503-73757522 None:intergenic 35.0%
TGATTGCATAATCCAAGCTT+GGG + chr4_1:73757735-73757754 None:intergenic 35.0%
TTGATTGCATAATCCAAGCT+TGG + chr4_1:73757736-73757755 None:intergenic 35.0%
TTATGCAATCAATACCCTCA+CGG - chr4_1:73757744-73757763 Msa0571200:intron 35.0%
TTGTTTGACAACGTTACTAG+AGG - chr4_1:73757937-73757956 Msa0571200:CDS 35.0%
TTTGACCTCTTTCTTTCTCT+TGG + chr4_1:73758040-73758059 None:intergenic 35.0%
! ACTCAAGAGCTTTATCAGAA+GGG + chr4_1:73758113-73758132 None:intergenic 35.0%
! TACTCAAGAGCTTTATCAGA+AGG + chr4_1:73758114-73758133 None:intergenic 35.0%
! TTCTTTGCATGGTTTTCTAC+TGG + chr4_1:73758139-73758158 None:intergenic 35.0%
! GTTAAAAGTACAGTTGCAGT+GGG + chr4_1:73758165-73758184 None:intergenic 35.0%
! AGTTAAAAGTACAGTTGCAG+TGG + chr4_1:73758166-73758185 None:intergenic 35.0%
TTGAATGCAAATTCCAAGCA+TGG + chr4_1:73758420-73758439 None:intergenic 35.0%
CTGCCAAATAATGAGTTGTA+TGG - chr4_1:73758513-73758532 Msa0571200:intron 35.0%
CTCCCATACAACTCATTATT+TGG + chr4_1:73758519-73758538 None:intergenic 35.0%
!!! AGGCATATTTTTTCGGGATA+AGG + chr4_1:73758667-73758686 None:intergenic 35.0%
GATTCTCCATTGGTGAATTT+AGG + chr4_1:73758687-73758706 None:intergenic 35.0%
AAGCAACATGATAAGGAATC+TGG - chr4_1:73758719-73758738 Msa0571200:intron 35.0%
ATGATTGTGAGATTCTTGAG+TGG + chr4_1:73758796-73758815 None:intergenic 35.0%
ATCATGAAGAGAACATGATG+AGG - chr4_1:73758811-73758830 Msa0571200:intron 35.0%
! TCTAGAATGATGCAGAAGTT+GGG + chr4_1:73758880-73758899 None:intergenic 35.0%
!! TTCTAGAATGATGCAGAAGT+TGG + chr4_1:73758881-73758900 None:intergenic 35.0%
AAAAATAACCAGGTTGCTGA+GGG - chr4_1:73758939-73758958 Msa0571200:intron 35.0%
! TACGCTTTAGTTTCAAAACC+CGG + chr4_1:73758990-73759009 None:intergenic 35.0%
GAAACTAAAGCGTATAACCA+TGG - chr4_1:73758996-73759015 Msa0571200:intron 35.0%
AGAGAATCTTGTAGTCATGA+AGG - chr4_1:73759023-73759042 Msa0571200:intron 35.0%
! AAAAATGATCAGGTTGCTGA+GGG - chr4_1:73759257-73759276 Msa0571200:intron 35.0%
!!! GTTTTAGTTTCAAAACCTGG+AGG + chr4_1:73759305-73759324 None:intergenic 35.0%
!!! AGACACATTTTTTCCAGATG+GGG + chr4_1:73759408-73759427 None:intergenic 35.0%
AATGTGTCTAAATTAGCCAC+TGG - chr4_1:73759419-73759438 Msa0571200:intron 35.0%
! TCTAGAATGATGCAGAAGTT+GGG + chr4_1:73758880-73758899 None:intergenic 35.0%
!! TTCTAGAATGATGCAGAAGT+TGG + chr4_1:73758881-73758900 None:intergenic 35.0%
!!! ACCTGGTCATTTTTCTTTAC+TGG + chr4_1:73759575-73759594 None:intergenic 35.0%
AAAAATGACCAGGTTGCTAA+GGG - chr4_1:73759581-73759600 Msa0571200:intron 35.0%
TAAGGGTGAATTTGGTACAT+CGG - chr4_1:73759598-73759617 Msa0571200:intron 35.0%
! AACGTTACAGTTTGAAATGG+CGG + chr4_1:73759632-73759651 None:intergenic 35.0%
! ACTGCTAAATTTTCCTCTAC+TGG + chr4_1:73759755-73759774 None:intergenic 35.0%
GAGGAAAATTTAGCAGTTCA+AGG - chr4_1:73759758-73759777 Msa0571200:intron 35.0%
GGAAAATTTAGCAGTTCAAG+GGG - chr4_1:73759760-73759779 Msa0571200:intron 35.0%
GAAAATTTAGCAGTTCAAGG+GGG - chr4_1:73759761-73759780 Msa0571200:intron 35.0%
AAACTGGAAGATCCAAAATC+TGG + chr4_1:73759839-73759858 None:intergenic 35.0%
TTCTCATTTCACTTTGACAC+AGG - chr4_1:73759872-73759891 Msa0571200:intron 35.0%
! AACTGGGAATATTGTTGTTG+CGG + chr4_1:73759980-73759999 None:intergenic 35.0%
GAATTGCAGGATCCGATTAT+TGG + chr4_1:73751636-73751655 None:intergenic 40.0%
TGGAGAAATGAACGAATTGC+AGG + chr4_1:73751649-73751668 None:intergenic 40.0%
GCAATTCGTTCATTTCTCCA+TGG - chr4_1:73751649-73751668 Msa0571200:CDS 40.0%
ATCTAGACACAGGAAATGCA+TGG + chr4_1:73751893-73751912 None:intergenic 40.0%
!! TGAAGCATTGACACAAACAC+TGG + chr4_1:73752284-73752303 None:intergenic 40.0%
AATCTGGAGGAACCAACAAA+CGG - chr4_1:73752460-73752479 Msa0571200:CDS 40.0%
AACCAAGTGACAAGTGAGAA+AGG + chr4_1:73752588-73752607 None:intergenic 40.0%
TTATATGCAGATCCCATAGC+CGG + chr4_1:73752707-73752726 None:intergenic 40.0%
TATGGGATCTGCATATAAGG+TGG - chr4_1:73752709-73752728 Msa0571200:CDS 40.0%
TTAGTGAAATGGATCTCTGG+GGG + chr4_1:73752868-73752887 None:intergenic 40.0%
CCATTAGTGAAATGGATCTC+TGG + chr4_1:73752871-73752890 None:intergenic 40.0%
CCAGAGATCCATTTCACTAA+TGG - chr4_1:73752868-73752887 Msa0571200:CDS 40.0%
! CTTTTGACAGTCCATACACA+TGG + chr4_1:73753073-73753092 None:intergenic 40.0%
!! AAAATCCAGCTCACCGATTT+AGG + chr4_1:73753100-73753119 None:intergenic 40.0%
! TAAATCGGTGAGCTGGATTT+TGG - chr4_1:73753099-73753118 Msa0571200:CDS 40.0%
! AAATCGGTGAGCTGGATTTT+GGG - chr4_1:73753100-73753119 Msa0571200:CDS 40.0%
CAAATTCTACTCCAAACCTG+AGG - chr4_1:73753492-73753511 Msa0571200:CDS 40.0%
ATGTCGTAATACCTCAGGTT+TGG + chr4_1:73753506-73753525 None:intergenic 40.0%
TCAAGATGTCGTAATACCTC+AGG + chr4_1:73753511-73753530 None:intergenic 40.0%
GCTAGTGCCTTTCTTCTTAT+TGG + chr4_1:73753560-73753579 None:intergenic 40.0%
TAGCAAGCATTCTCCAAACA+AGG - chr4_1:73753576-73753595 Msa0571200:CDS 40.0%
! TTTTTCTCTTCCTCCTTGCT+TGG + chr4_1:73753637-73753656 None:intergenic 40.0%
ACATGCATTCTCCAAACAAG+GGG - chr4_1:73753707-73753726 Msa0571200:CDS 40.0%
!! ATAGGGTGTTTTTGTGTGTC+AGG - chr4_1:73754209-73754228 Msa0571200:CDS 40.0%
ACTTCTTTAATCCATCCAGG+TGG + chr4_1:73754525-73754544 None:intergenic 40.0%
GATATCACGCTATAAACCAC+AGG + chr4_1:73754712-73754731 None:intergenic 40.0%
TGGAATACATATCCACTCAC+TGG + chr4_1:73754812-73754831 None:intergenic 40.0%
GTTGTACATCCTTCTTGGAA+TGG + chr4_1:73754832-73754851 None:intergenic 40.0%
ACTTGGTTTAATGGCACACT+TGG + chr4_1:73754879-73754898 None:intergenic 40.0%
!!! GAAAGAAGTTTTTTCGGGAG+TGG + chr4_1:73755231-73755250 None:intergenic 40.0%
CTGGAGGCAACATAAATCAT+TGG + chr4_1:73755285-73755304 None:intergenic 40.0%
! CAAGTCTTGTACTAACGTAC+TGG + chr4_1:73755304-73755323 None:intergenic 40.0%
! GTTGGAAAGCTTTTGTTCTG+AGG - chr4_1:73755501-73755520 Msa0571200:intron 40.0%
CGAAACTAGAGCAGCAAATT+AGG - chr4_1:73755546-73755565 Msa0571200:intron 40.0%
!! CTTTGATGGATTGTGGATTC+TGG - chr4_1:73756226-73756245 Msa0571200:intron 40.0%
!! ATGACTTTTGGTAGCAGACA+TGG - chr4_1:73756321-73756340 Msa0571200:intron 40.0%
!! CAAGCCTTATTCACTAAGTG+GGG + chr4_1:73756513-73756532 None:intergenic 40.0%
!! CCAAGCCTTATTCACTAAGT+GGG + chr4_1:73756514-73756533 None:intergenic 40.0%
!! ACCAAGCCTTATTCACTAAG+TGG + chr4_1:73756515-73756534 None:intergenic 40.0%
!!! CTGCTTTGGTTTTTGTCTCT+TGG + chr4_1:73756763-73756782 None:intergenic 40.0%
CTTCAAGCTCAACCAACTTA+AGG - chr4_1:73756848-73756867 Msa0571200:intron 40.0%
GCCAATTCTAAGCTTTCAAC+TGG + chr4_1:73756947-73756966 None:intergenic 40.0%
ATGATGTCAATGTGAGCCAT+CGG - chr4_1:73757086-73757105 Msa0571200:intron 40.0%
ACATTGTCAACCAACTTGAC+AGG + chr4_1:73757139-73757158 None:intergenic 40.0%
! CGTTTGGTTGCTCGATTTTT+GGG + chr4_1:73757267-73757286 None:intergenic 40.0%
! CTTACTGGATTTGTTTGGGT+TGG + chr4_1:73757389-73757408 None:intergenic 40.0%
!!! GGAAGCTTTTTCACAGGATA+TGG + chr4_1:73757482-73757501 None:intergenic 40.0%
AGCTGAATTGCAACTAAGTG+AGG - chr4_1:73757534-73757553 Msa0571200:intron 40.0%
GCTGAATTGCAACTAAGTGA+GGG - chr4_1:73757535-73757554 Msa0571200:intron 40.0%
AATTGCAACTAAGTGAGGGT+GGG - chr4_1:73757539-73757558 Msa0571200:intron 40.0%
ACTCTCTATGTAATGGTGCA+TGG + chr4_1:73757585-73757604 None:intergenic 40.0%
TGCACCATTACATAGAGAGT+CGG - chr4_1:73757585-73757604 Msa0571200:intron 40.0%
TTTCCCGACTCTCTATGTAA+TGG + chr4_1:73757592-73757611 None:intergenic 40.0%
ACAAGTGGAAAAACCTGAAG+TGG - chr4_1:73757654-73757673 Msa0571200:intron 40.0%
GATTTCTCATCATCCACTTC+AGG + chr4_1:73757670-73757689 None:intergenic 40.0%
TATGCAATCAATACCCTCAC+GGG - chr4_1:73757745-73757764 Msa0571200:intron 40.0%
TCAAGAGGATTATCAACTGG+TGG + chr4_1:73757778-73757797 None:intergenic 40.0%
TCAATTTCAGGGACTGTAGA+GGG + chr4_1:73757808-73757827 None:intergenic 40.0%
ATCAATTTCAGGGACTGTAG+AGG + chr4_1:73757809-73757828 None:intergenic 40.0%
CATCTAACCATCTCTATGGT+GGG - chr4_1:73758193-73758212 Msa0571200:intron 40.0%
ATCTAACCATCTCTATGGTG+GGG - chr4_1:73758194-73758213 Msa0571200:intron 40.0%
!! AGTTTGAAAGCAGAAGTGCT+AGG - chr4_1:73758249-73758268 Msa0571200:intron 40.0%
GGAGAATCATCAAGAAAGTG+TGG - chr4_1:73758270-73758289 Msa0571200:intron 40.0%
TGATACCCAAACTGTTCACA+AGG - chr4_1:73758302-73758321 Msa0571200:intron 40.0%
CTGTTCCTTGTGAACAGTTT+GGG + chr4_1:73758310-73758329 None:intergenic 40.0%
TGTTCACAAGGAACAGCAAT+CGG - chr4_1:73758314-73758333 Msa0571200:intron 40.0%
TCAGAGCTCACTTTACCATT+TGG - chr4_1:73758378-73758397 Msa0571200:intron 40.0%
! CTTTACCATTTGGTGAATCC+TGG - chr4_1:73758388-73758407 Msa0571200:intron 40.0%
TTTGCATTCAAGACTCTCAC+TGG - chr4_1:73758429-73758448 Msa0571200:intron 40.0%
AACTCAGCAGAAGAATCAAC+CGG + chr4_1:73758462-73758481 None:intergenic 40.0%
AAAGTTTCGACTCCTAGTGT+TGG - chr4_1:73758486-73758505 Msa0571200:intron 40.0%
!!! GCTCTTTCTTGTTTTCGGAT+TGG + chr4_1:73758584-73758603 None:intergenic 40.0%
AGTCTTCGAAGATACTGCTT+GGG - chr4_1:73758619-73758638 Msa0571200:intron 40.0%
GAAAAATAACCAGGTTGCTG+AGG - chr4_1:73758938-73758957 Msa0571200:intron 40.0%
AAAATAACCAGGTTGCTGAG+GGG - chr4_1:73758940-73758959 Msa0571200:intron 40.0%
TACAAGATTCTCTGTTGCCA+TGG + chr4_1:73759016-73759035 None:intergenic 40.0%
GTCATGAAGGCAACAACATA+AGG - chr4_1:73759036-73759055 Msa0571200:intron 40.0%
AGGCAACAACATAAGGAATC+TGG - chr4_1:73759043-73759062 Msa0571200:intron 40.0%
!!! TGACGCATTTTTTCCAGATG+TGG + chr4_1:73759090-73759109 None:intergenic 40.0%
! TCTAGAACGATGCAGAAGTT+GGG + chr4_1:73759198-73759217 None:intergenic 40.0%
!! TTCTAGAACGATGCAGAAGT+TGG + chr4_1:73759199-73759218 None:intergenic 40.0%
! GAAAAATGATCAGGTTGCTG+AGG - chr4_1:73759256-73759275 Msa0571200:intron 40.0%
TGAGGGTGAATTTGGTACAT+CGG - chr4_1:73759274-73759293 Msa0571200:intron 40.0%
GGAGAATCTCTTAGTCATGA+AGG - chr4_1:73759341-73759360 Msa0571200:intron 40.0%
GTGACTATGAAATTCTCCAG+TGG + chr4_1:73759438-73759457 None:intergenic 40.0%
GCCAGTAAAGAAAAATGACC+AGG - chr4_1:73759571-73759590 Msa0571200:intron 40.0%
GAAAAATGACCAGGTTGCTA+AGG - chr4_1:73759580-73759599 Msa0571200:intron 40.0%
GAACCTGTTAACTGTCATGA+TGG - chr4_1:73759791-73759810 Msa0571200:intron 40.0%
! CTGTTAACTGTCATGATGGA+GGG - chr4_1:73759795-73759814 Msa0571200:intron 40.0%
! TGTTAACTGTCATGATGGAG+GGG - chr4_1:73759796-73759815 Msa0571200:intron 40.0%
TCATTTCACTTTGACACAGG+AGG - chr4_1:73759875-73759894 Msa0571200:intron 40.0%
CATTTCACTTTGACACAGGA+GGG - chr4_1:73759876-73759895 Msa0571200:intron 40.0%
AGTTGACCCTAATACCCTCA+TGG - chr4_1:73752083-73752102 Msa0571200:CDS 45.0%
!! GTCACTCCATGAGGGTATTA+GGG + chr4_1:73752092-73752111 None:intergenic 45.0%
!! TGTCACTCCATGAGGGTATT+AGG + chr4_1:73752093-73752112 None:intergenic 45.0%
ATGTGTAGCCATGTAGGTGT+TGG + chr4_1:73752185-73752204 None:intergenic 45.0%
ACATGTGTGAGTGTCAGTTG+CGG + chr4_1:73752210-73752229 None:intergenic 45.0%
TGCCTTTCTCACTTGTCACT+TGG - chr4_1:73752583-73752602 Msa0571200:CDS 45.0%
TGAATGGTTGCCTAATGGCT+GGG - chr4_1:73752652-73752671 Msa0571200:CDS 45.0%
ACTTCGATATCCCAGCCATT+AGG + chr4_1:73752665-73752684 None:intergenic 45.0%
GAAGTTAGAACCCGACAAAG+TGG - chr4_1:73752680-73752699 Msa0571200:CDS 45.0%
GGCTATGGGATCTGCATATA+AGG - chr4_1:73752706-73752725 Msa0571200:CDS 45.0%
CAAGCATTCTCCAAACAAGG+AGG - chr4_1:73753579-73753598 Msa0571200:CDS 45.0%
CATTCTCCAAACAAGGAGGA+GGG - chr4_1:73753583-73753602 Msa0571200:CDS 45.0%
ATTCTCCAAACAAGGAGGAG+GGG - chr4_1:73753584-73753603 Msa0571200:CDS 45.0%
TAAGCAGCATTCTCCAAGCA+AGG - chr4_1:73753621-73753640 Msa0571200:CDS 45.0%
TAACCAGCATTCTCCAAGCA+AGG - chr4_1:73753666-73753685 Msa0571200:CDS 45.0%
CATTTCTCTTCCTCCTTGCT+TGG + chr4_1:73753682-73753701 None:intergenic 45.0%
CATGCATTCTCCAAACAAGG+GGG - chr4_1:73753708-73753727 Msa0571200:CDS 45.0%
TGTTTCTCTTCCCCCTTGTT+TGG + chr4_1:73753721-73753740 None:intergenic 45.0%
ATGCATTCTCCAAGCAAGGA+CGG - chr4_1:73753748-73753767 Msa0571200:CDS 45.0%
! ATAGAGGTGCACACATTGCT+TGG + chr4_1:73753799-73753818 None:intergenic 45.0%
AACGGCCGCCATAAAATTCT+AGG + chr4_1:73753973-73753992 None:intergenic 45.0%
AAAATGGTCGTCCCAGCTTA+AGG - chr4_1:73754119-73754138 Msa0571200:CDS 45.0%
! TTTGCTATGCTCTAGGTTGC+AGG - chr4_1:73754474-73754493 Msa0571200:CDS 45.0%
! AAGATTCGGAAGCACAGAAG+TGG - chr4_1:73754546-73754565 Msa0571200:CDS 45.0%
CTGTCCTCTCTCTTCCAAAA+AGG - chr4_1:73754626-73754645 Msa0571200:intron 45.0%
TCCTCTCTCTTCCAAAAAGG+AGG - chr4_1:73754629-73754648 Msa0571200:intron 45.0%
!! ACCTCCTTTTTGGAAGAGAG+AGG + chr4_1:73754633-73754652 None:intergenic 45.0%
TAGTGAGTTGCAAATGCCTG+TGG - chr4_1:73754693-73754712 Msa0571200:intron 45.0%
!!! GTTTTTTCGGGAGTGGATGT+AGG + chr4_1:73755224-73755243 None:intergenic 45.0%
GTCTTGTACTAACGTACTGG+AGG + chr4_1:73755301-73755320 None:intergenic 45.0%
TCTGCCCCACTTAGTGAATA+AGG - chr4_1:73756506-73756525 Msa0571200:intron 45.0%
CCCACTTAGTGAATAAGGCT+TGG - chr4_1:73756511-73756530 Msa0571200:intron 45.0%
TGGCCGATGTTAACAACTCA+AGG - chr4_1:73756963-73756982 Msa0571200:intron 45.0%
GAATGTGCCATCTCGAATGA+TGG - chr4_1:73757000-73757019 Msa0571200:CDS 45.0%
AGAGCAACCATCATTCGAGA+TGG + chr4_1:73757010-73757029 None:intergenic 45.0%
ATGGTTGCTCTTGATACCTC+AGG - chr4_1:73757019-73757038 Msa0571200:CDS 45.0%
TGGTTGCTCTTGATACCTCA+GGG - chr4_1:73757020-73757039 Msa0571200:CDS 45.0%
!! CATTTTCAAGGATTCCCCTG+AGG + chr4_1:73757038-73757057 None:intergenic 45.0%
!!! ATGTGAGCCATCGGTTTTCA+CGG - chr4_1:73757095-73757114 Msa0571200:intron 45.0%
! TGGTGTTGAACCTGTCAAGT+TGG - chr4_1:73757126-73757145 Msa0571200:intron 45.0%
!! AACTACTCTAGGCGCTGATA+TGG - chr4_1:73757210-73757229 Msa0571200:intron 45.0%
! GCGTTTGGTTGCTCGATTTT+TGG + chr4_1:73757268-73757287 None:intergenic 45.0%
AATCGAGCAACCAAACGCAA+TGG - chr4_1:73757270-73757289 Msa0571200:intron 45.0%
TTGCTTGTGTCCATTGCGTT+TGG + chr4_1:73757283-73757302 None:intergenic 45.0%
TCCAGTAAGAAGAAAGAGCC+CGG - chr4_1:73757400-73757419 Msa0571200:intron 45.0%
GATATGGAGTTCATCAGCCT+GGG + chr4_1:73757466-73757485 None:intergenic 45.0%
GAATTGCAACTAAGTGAGGG+TGG - chr4_1:73757538-73757557 Msa0571200:intron 45.0%
! TGGTCTGTAAGCTTGGTAAC+TGG + chr4_1:73757565-73757584 None:intergenic 45.0%
GCACCATTACATAGAGAGTC+GGG - chr4_1:73757586-73757605 Msa0571200:intron 45.0%
TCTGCAGCAGGTATGATTCT+AGG + chr4_1:73757631-73757650 None:intergenic 45.0%
TGGAATGCAAAGGACAGTTG+AGG + chr4_1:73757697-73757716 None:intergenic 45.0%
! CCAAGAGTAGTGGAATGCAA+AGG + chr4_1:73757707-73757726 None:intergenic 45.0%
CCTTTGCATTCCACTACTCT+TGG - chr4_1:73757704-73757723 Msa0571200:intron 45.0%
ACACTGTCACTGGAAAAAGC+AGG - chr4_1:73757848-73757867 Msa0571200:CDS 45.0%
CACTGTCACTGGAAAAAGCA+GGG - chr4_1:73757849-73757868 Msa0571200:CDS 45.0%
ACTGTCACTGGAAAAAGCAG+GGG - chr4_1:73757850-73757869 Msa0571200:CDS 45.0%
ATCAGTTTCATGGACGGTAG+CGG + chr4_1:73757905-73757924 None:intergenic 45.0%
AAGCAGAGACAAAAACCCAC+TGG - chr4_1:73758002-73758021 Msa0571200:CDS 45.0%
!!! TGGATTTTGACTGCACCAGT+GGG + chr4_1:73758020-73758039 None:intergenic 45.0%
!!! TTGGATTTTGACTGCACCAG+TGG + chr4_1:73758021-73758040 None:intergenic 45.0%
AAGAGGTCAAAGTCCCTATG+CGG - chr4_1:73758049-73758068 Msa0571200:CDS 45.0%
! GGAGCATCTAACCATCTCTA+TGG - chr4_1:73758189-73758208 Msa0571200:intron 45.0%
GCATCTAACCATCTCTATGG+TGG - chr4_1:73758192-73758211 Msa0571200:intron 45.0%
TTTCTTCCCCACCATAGAGA+TGG + chr4_1:73758203-73758222 None:intergenic 45.0%
AGACACATGACGAGTAAGCT+TGG + chr4_1:73758226-73758245 None:intergenic 45.0%
GCTGTTCCTTGTGAACAGTT+TGG + chr4_1:73758311-73758330 None:intergenic 45.0%
TCTGACCAGGATTCACCAAA+TGG + chr4_1:73758396-73758415 None:intergenic 45.0%
TTTGGCAGTTCACCAACACT+AGG + chr4_1:73758501-73758520 None:intergenic 45.0%
CAGTCTTCGAAGATACTGCT+TGG - chr4_1:73758618-73758637 Msa0571200:intron 45.0%
GCGACTATGAGATTCTCCAT+TGG + chr4_1:73758697-73758716 None:intergenic 45.0%
GTCGCGAAAGCAACATGATA+AGG - chr4_1:73758712-73758731 Msa0571200:intron 45.0%
!!! AGACACACTTTTTCCAGGTG+TGG + chr4_1:73758766-73758785 None:intergenic 45.0%
AAATAACCAGGTTGCTGAGG+GGG - chr4_1:73758941-73758960 Msa0571200:intron 45.0%
TGAGGGGGAATTTGGTACAT+TGG - chr4_1:73758956-73758975 Msa0571200:intron 45.0%
TGGTACATTGGATCAACCAC+CGG - chr4_1:73758968-73758987 Msa0571200:intron 45.0%
! GCTTTAGTTTCAAAACCCGG+TGG + chr4_1:73758987-73759006 None:intergenic 45.0%
GTCATGAAGGCAACAACATG+AGG - chr4_1:73759354-73759373 Msa0571200:intron 45.0%
CAAATTCACCCTTAGCAACC+TGG + chr4_1:73759592-73759611 None:intergenic 45.0%
CAGGTTGCTAAGGGTGAATT+TGG - chr4_1:73759590-73759609 Msa0571200:intron 45.0%
! GTTACAGTTTGAAATGGCGG+TGG + chr4_1:73759629-73759648 None:intergenic 45.0%
ACTGCAACTCAGTATTGTCG+TGG + chr4_1:73759658-73759677 None:intergenic 45.0%
TACAGGTGTGATTCCAGTAG+AGG - chr4_1:73759739-73759758 Msa0571200:intron 45.0%
CATGACAGTTAACAGGTTCC+TGG + chr4_1:73759790-73759809 None:intergenic 45.0%
CCTCCATCATGACAGTTAAC+AGG + chr4_1:73759797-73759816 None:intergenic 45.0%
CCTGTTAACTGTCATGATGG+AGG - chr4_1:73759794-73759813 Msa0571200:intron 45.0%
! GTATCAGCGTTGCCAGATTT+TGG - chr4_1:73759824-73759843 Msa0571200:intron 45.0%
! TTGTTGTTGCGGATCAACTC+CGG + chr4_1:73759969-73759988 None:intergenic 45.0%
!!! CTATAAAATAAATATATTTT+AGG - chr4_1:73756819-73756838 Msa0571200:intron 5.0%
CGTCCTGAATGGTTGCCTAA+TGG - chr4_1:73752647-73752666 Msa0571200:CDS 50.0%
CAGCCATTAGGCAACCATTC+AGG + chr4_1:73752653-73752672 None:intergenic 50.0%
CTGAATGGTTGCCTAATGGC+TGG - chr4_1:73752651-73752670 Msa0571200:CDS 50.0%
TAGAACCCGACAAAGTGGTC+CGG - chr4_1:73752685-73752704 Msa0571200:CDS 50.0%
GTTGTCCTAAATCGGTGAGC+TGG - chr4_1:73753092-73753111 Msa0571200:CDS 50.0%
GCATTCTCCAAACAAGGAGG+AGG - chr4_1:73753582-73753601 Msa0571200:CDS 50.0%
TGTTTCCCCTCCTCCTTGTT+TGG + chr4_1:73753592-73753611 None:intergenic 50.0%
CAGCATGCATTCTCCAAGCA+AGG - chr4_1:73753744-73753763 Msa0571200:CDS 50.0%
CATTTCTCTCCGTCCTTGCT+TGG + chr4_1:73753760-73753779 None:intergenic 50.0%
! ATACTTGGGTTGTGCGCTGT+TGG - chr4_1:73754272-73754291 Msa0571200:CDS 50.0%
TGCAGGCGAGAATTCCATTG+TGG - chr4_1:73754491-73754510 Msa0571200:CDS 50.0%
AGGCGAGAATTCCATTGTGG+AGG - chr4_1:73754494-73754513 Msa0571200:CDS 50.0%
AGGTGGTAGATCCTCCACAA+TGG + chr4_1:73754508-73754527 None:intergenic 50.0%
ATTGTGGAGGATCTACCACC+TGG - chr4_1:73754507-73754526 Msa0571200:CDS 50.0%
TGAGCAAGTTAGAAGGGGAG+AGG - chr4_1:73755328-73755347 Msa0571200:intron 50.0%
TAGAAGGGGAGAGGAGTCTA+TGG - chr4_1:73755337-73755356 Msa0571200:intron 50.0%
!!! GGGCATTTTTTGGGCTACCA+AGG + chr4_1:73755985-73756004 None:intergenic 50.0%
! GGTTTTTGTCTCTTGGCAGC+AGG + chr4_1:73756756-73756775 None:intergenic 50.0%
TGCATGGGTGTAGACTGCTT+TGG + chr4_1:73756777-73756796 None:intergenic 50.0%
GGTTGCTCTTGATACCTCAG+GGG - chr4_1:73757021-73757040 Msa0571200:CDS 50.0%
!!! AGTCGTTTTGAAGCCCGACA+AGG + chr4_1:73757430-73757449 None:intergenic 50.0%
TTGTCGGGCTTCAAAACGAC+TGG - chr4_1:73757429-73757448 Msa0571200:intron 50.0%
GGATATGGAGTTCATCAGCC+TGG + chr4_1:73757467-73757486 None:intergenic 50.0%
TGGTGCATGGTCTGTAAGCT+TGG + chr4_1:73757572-73757591 None:intergenic 50.0%
ACCTGCTGCAGACAAACAAG+TGG - chr4_1:73757639-73757658 Msa0571200:intron 50.0%
TCCACTTGTTTGTCTGCAGC+AGG + chr4_1:73757643-73757662 None:intergenic 50.0%
TTGGGTCAGACCAAGAGTAG+TGG + chr4_1:73757717-73757736 None:intergenic 50.0%
GTAGAGGGTCCCTTATCAAG+AGG + chr4_1:73757793-73757812 None:intergenic 50.0%
CCAGTGACAGTGTCAAATGC+AGG + chr4_1:73757841-73757860 None:intergenic 50.0%
CCTGCATTTGACACTGTCAC+TGG - chr4_1:73757838-73757857 Msa0571200:CDS 50.0%
TCAGTTTCATGGACGGTAGC+GGG + chr4_1:73757904-73757923 None:intergenic 50.0%
! GTCGCTTTGACAACCGCATA+GGG + chr4_1:73758065-73758084 None:intergenic 50.0%
! AGTCGCTTTGACAACCGCAT+AGG + chr4_1:73758066-73758085 None:intergenic 50.0%
TTATCAGAAGGGCTTGCCTC+CGG + chr4_1:73758102-73758121 None:intergenic 50.0%
!! GCAGTGGGCTTTTCTTTGCA+TGG + chr4_1:73758150-73758169 None:intergenic 50.0%
ATCCTGGTCAGATCCATGCT+TGG - chr4_1:73758404-73758423 Msa0571200:intron 50.0%
TTCCAAGCATGGATCTGACC+AGG + chr4_1:73758409-73758428 None:intergenic 50.0%
AAGGAGCTAGTCCTCAACTC+AGG + chr4_1:73758648-73758667 None:intergenic 50.0%
! GGAATCTGGAACCTGTGTTG+AGG - chr4_1:73758733-73758752 Msa0571200:intron 50.0%
GGTACATTGGATCAACCACC+GGG - chr4_1:73758969-73758988 Msa0571200:intron 50.0%
! GGAATCTGGAACCTGTGTTG+AGG - chr4_1:73758733-73758752 Msa0571200:intron 50.0%
!! TTGAGGACTAGCTCCACATC+TGG - chr4_1:73759074-73759093 Msa0571200:CDS 50.0%
CAGGTTGCTGAGGGTGAATT+TGG - chr4_1:73759266-73759285 Msa0571200:intron 50.0%
AGGCAACAACATGAGGAACC+TGG - chr4_1:73759361-73759380 Msa0571200:intron 50.0%
TAGTCCTCAACACAGGTTCC+AGG + chr4_1:73759064-73759083 None:intergenic 50.0%
! AACTGTCATGATGGAGGGGA+TGG - chr4_1:73759800-73759819 Msa0571200:intron 50.0%
AACCTTGCAGGCTCAGAGAT+GGG + chr4_1:73759943-73759962 None:intergenic 50.0%
TGTTGTTGCGGATCAACTCC+GGG + chr4_1:73759968-73759987 None:intergenic 50.0%
GCGGACATGTGTAGCCATGT+AGG + chr4_1:73752191-73752210 None:intergenic 55.0%
AAGCTGACGAGCGTCCTGAA+TGG - chr4_1:73752636-73752655 Msa0571200:CDS 55.0%
CATAGCCGGACCACTTTGTC+GGG + chr4_1:73752693-73752712 None:intergenic 55.0%
CCATAGCCGGACCACTTTGT+CGG + chr4_1:73752694-73752713 None:intergenic 55.0%
CGACAAAGTGGTCCGGCTAT+GGG - chr4_1:73752692-73752711 Msa0571200:CDS 55.0%
! ATCTCTGGGGGACTACAAGC+TGG + chr4_1:73752856-73752875 None:intergenic 55.0%
GCAGCATTCTCCAAGCAAGG+AGG - chr4_1:73753624-73753643 Msa0571200:CDS 55.0%
CCTCCTTGCTTGGAGAATGC+TGG + chr4_1:73753627-73753646 None:intergenic 55.0%
CCAGCATTCTCCAAGCAAGG+AGG - chr4_1:73753669-73753688 Msa0571200:CDS 55.0%
TGGAGGATCTACCACCTGGA+TGG - chr4_1:73754511-73754530 Msa0571200:CDS 55.0%
TGTCTCTTGGCAGCAGGTGA+TGG + chr4_1:73756750-73756769 None:intergenic 55.0%
CCAGTCTCCGTGAAAACCGA+TGG + chr4_1:73757105-73757124 None:intergenic 55.0%
!!! CCATCGGTTTTCACGGAGAC+TGG - chr4_1:73757102-73757121 Msa0571200:intron 55.0%
GCCGGGCTCTTTCTTCTTAC+TGG + chr4_1:73757404-73757423 None:intergenic 55.0%
AAGAGCCCGGCATTCCTTGT+CGG - chr4_1:73757413-73757432 Msa0571200:intron 55.0%
TGAAGCCCGACAAGGAATGC+CGG + chr4_1:73757422-73757441 None:intergenic 55.0%
CTCTTGGTCTGACCCAAGCT+TGG - chr4_1:73757720-73757739 Msa0571200:intron 55.0%
TGGTGGTAACACACCCGTGA+GGG + chr4_1:73757761-73757780 None:intergenic 55.0%
CGGTTGTCAAAGCGACTTGC+TGG - chr4_1:73758069-73758088 Msa0571200:CDS 55.0%
!! GCGACTTGCTGGCATTGAAC+CGG - chr4_1:73758080-73758099 Msa0571200:CDS 55.0%
! ACTTGCTGGCATTGAACCGG+AGG - chr4_1:73758083-73758102 Msa0571200:CDS 55.0%
GACTCTCACTGGTGCTTTGC+CGG - chr4_1:73758440-73758459 Msa0571200:intron 55.0%
TGGGAGAGTGACAACCAGCA+TGG - chr4_1:73758533-73758552 Msa0571200:intron 55.0%
TGCTTGGGCAACCTGAGTTG+AGG - chr4_1:73758634-73758653 Msa0571200:intron 55.0%
GTGGAGCTAGACCTCAACAC+AGG + chr4_1:73758747-73758766 None:intergenic 55.0%
! TTGAGGTCTAGCTCCACACC+TGG - chr4_1:73758750-73758769 Msa0571200:intron 55.0%
CAAATTCCCCCTCAGCAACC+TGG + chr4_1:73758950-73758969 None:intergenic 55.0%
CAGGTTGCTGAGGGGGAATT+TGG - chr4_1:73758948-73758967 Msa0571200:intron 55.0%
GTGGAGCTAGTCCTCAACAC+AGG + chr4_1:73759071-73759090 None:intergenic 55.0%
GGAACCTGGAACCTGTGTTG+AGG - chr4_1:73759375-73759394 Msa0571200:intron 55.0%
!! TTGAGGACTAGCTCCCCATC+TGG - chr4_1:73759392-73759411 Msa0571200:intron 55.0%
! CTCATTGATGACTGCTGCCC+TGG + chr4_1:73759911-73759930 None:intergenic 55.0%
TGCAGGCTCAGAGATGGGAA+TGG + chr4_1:73759938-73759957 None:intergenic 55.0%
TTCCCATCTCTGAGCCTGCA+AGG - chr4_1:73759938-73759957 Msa0571200:five_prime_UTR 55.0%
CAACCTTGCAGGCTCAGAGA+TGG + chr4_1:73759944-73759963 None:intergenic 55.0%
GGGGCAGTCCAACACCTACA+TGG - chr4_1:73752174-73752193 Msa0571200:CDS 60.0%
GGACGCTCGTCAGCTTTCTC+TGG + chr4_1:73752632-73752651 None:intergenic 60.0%
CCGACAAAGTGGTCCGGCTA+TGG - chr4_1:73752691-73752710 Msa0571200:CDS 60.0%
! CGGTTTTCACGGAGACTGGC+TGG - chr4_1:73757106-73757125 Msa0571200:intron 60.0%
AGAGCCCGGCATTCCTTGTC+GGG - chr4_1:73757414-73757433 Msa0571200:intron 60.0%
GAAGCCCGACAAGGAATGCC+GGG + chr4_1:73757421-73757440 None:intergenic 60.0%
CGGGCTTCAAAACGACTGGC+TGG - chr4_1:73757433-73757452 Msa0571200:intron 60.0%
! GACTGGCTGGATCTGAACCC+AGG - chr4_1:73757446-73757465 Msa0571200:intron 60.0%
CTGGTGGTAACACACCCGTG+AGG + chr4_1:73757762-73757781 None:intergenic 60.0%
GGGGAGCTAGTCCTCAACAC+AGG + chr4_1:73759389-73759408 None:intergenic 60.0%
!! AGCAGTTCAAGGGGGTGTCC+AGG - chr4_1:73759769-73759788 Msa0571200:intron 60.0%
ACAGGAGGGAAGTCCATGCC+AGG - chr4_1:73759890-73759909 Msa0571200:five_prime_UTR 60.0%
CAGGAGGGAAGTCCATGCCA+GGG - chr4_1:73759891-73759910 Msa0571200:five_prime_UTR 60.0%
TGATGACTGCTGCCCTGGCA+TGG + chr4_1:73759906-73759925 None:intergenic 60.0%
CTGAGCCTGCAAGGTTGTCC+CGG - chr4_1:73759947-73759966 Msa0571200:five_prime_UTR 60.0%
CAACTCCGGGACAACCTTGC+AGG + chr4_1:73759955-73759974 None:intergenic 60.0%
GGTACATCGGAGCAGCCTCC+AGG - chr4_1:73759287-73759306 Msa0571200:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 73751549 73760024 73751549 ID=Msa0571200;Name=Msa0571200
chr4_1 mRNA 73751549 73760024 73751549 ID=Msa0571200-mRNA-1;Parent=Msa0571200;Name=Msa0571200-mRNA-1;_AED=0.05;_eAED=0.05;_QI=161|1|0.75|1|0.85|0.75|8|0|1301
chr4_1 exon 73751549 73754637 73751549 ID=Msa0571200-mRNA-1:exon:25305;Parent=Msa0571200-mRNA-1
chr4_1 exon 73754763 73754826 73754763 ID=Msa0571200-mRNA-1:exon:25304;Parent=Msa0571200-mRNA-1
chr4_1 exon 73756642 73756776 73756642 ID=Msa0571200-mRNA-1:exon:25303;Parent=Msa0571200-mRNA-1
chr4_1 exon 73756989 73757084 73756989 ID=Msa0571200-mRNA-1:exon:25302;Parent=Msa0571200-mRNA-1
chr4_1 exon 73757769 73758107 73757769 ID=Msa0571200-mRNA-1:exon:25301;Parent=Msa0571200-mRNA-1
chr4_1 exon 73758846 73758947 73758846 ID=Msa0571200-mRNA-1:exon:25300;Parent=Msa0571200-mRNA-1
chr4_1 exon 73759055 73759155 73759055 ID=Msa0571200-mRNA-1:exon:25299;Parent=Msa0571200-mRNA-1
chr4_1 exon 73759884 73760024 73759884 ID=Msa0571200-mRNA-1:exon:25298;Parent=Msa0571200-mRNA-1
chr4_1 five_prime_UTR 73759884 73760024 73759884 ID=Msa0571200-mRNA-1:five_prime_utr;Parent=Msa0571200-mRNA-1
chr4_1 five_prime_UTR 73759136 73759155 73759136 ID=Msa0571200-mRNA-1:five_prime_utr;Parent=Msa0571200-mRNA-1
chr4_1 CDS 73759055 73759135 73759055 ID=Msa0571200-mRNA-1:cds;Parent=Msa0571200-mRNA-1
chr4_1 CDS 73758846 73758947 73758846 ID=Msa0571200-mRNA-1:cds;Parent=Msa0571200-mRNA-1
chr4_1 CDS 73757769 73758107 73757769 ID=Msa0571200-mRNA-1:cds;Parent=Msa0571200-mRNA-1
chr4_1 CDS 73756989 73757084 73756989 ID=Msa0571200-mRNA-1:cds;Parent=Msa0571200-mRNA-1
chr4_1 CDS 73756642 73756776 73756642 ID=Msa0571200-mRNA-1:cds;Parent=Msa0571200-mRNA-1
chr4_1 CDS 73754763 73754826 73754763 ID=Msa0571200-mRNA-1:cds;Parent=Msa0571200-mRNA-1
chr4_1 CDS 73751549 73754637 73751549 ID=Msa0571200-mRNA-1:cds;Parent=Msa0571200-mRNA-1
Gene Sequence

>Msa0571200

ATGGGAAAACCAAACGTTAAAAAATCTGGAGGAACCAACAAACGGATTGACAATGAAACAAAACGCAACTCTAAACAACAAACTCCAGAGAAAGCTGACGAGCGTCCTGAATGGTTGCCTAATGGCTGGGATATCGAAGTTAGAACCCGACAAAGTGGTCCGGCTATGGGATCTGCATATAAGTGTTACATTGATCCATCAAATACATACAAATTCTACTCCAAACCTGAGGTATTACGACATCTTGAAACTATAAAGGACAGAAAATGCTCTTCCAATAAGAAGAAAGGCACTAGCAAGCATTCTCCAAACAAGGAGGAGGGGAAACACACTAAGAGTAAGCAGCATTCTCCAAGCAAGGAGGAAGAGAAAAAGACTAAGAGTAACCAGCATTCTCCAAGCAAGGAGGAAGAGAAATGCATTAACATGCATTCTCCAAACAAGGGGGAAGAGAAACACATCAGCATGCATTCTCCAAGCAAGGACGGAGAGAAATGCACTAACATGCACTCTCCAAGCAATGTTGCAGGCGAGAATTCCATTGTGGAGGATCTACCACCTGGATGGATTAAAGAAGTAAAGATTCGGAAGCACAGAAGTGGCATAAAGAAAGATTGGTTTTATATTGATCCAGTGAGTGGATATGTATTCCATTCCAAGAAGGATGTACAACGTTTTCTCAAATCTGGAGATATAGCCAAGTGTGCCATTAAACCAAGTAGAAGACAATATCAAGATGAAGACAACTCAACTCCATCACCTGCTGCCAAGAGACAAAAACCAAAGCAGTCTACACCCATGCAAAAGATTTTTGTTGCCAAAGAACCAGTTGAAAGCTTAGAATTGGCCGATGTTAACAACTCAAGGAAAGGGCAAGATGTGAATGTGCCATCTCGAATGATGGTTGCTCTTGATACCTCAGGGGAATCCTTGAAAATGAATCACAGTAACCATAGCATATCCAAAAATGATGTCAATGTGAGCCATCGGTTTTCACGGAGACTGGCTGGTGTTGAACCTGTCAAGTTGGTTGACAATGTGATTAATGATGAGGCTCTTCTAGTTCCAAAAAGAAACTTGAGAAAAAACAGAACTACTCTAGGCGCTGATATGGAAAATAAATCATCTCAGCATTTCAAGGGTGTCCCAAAAATCGAGCAACCAAACGCAATGGACACAAGCAACACTCTTTCTGAAGTAGTTTTCAAAGAACAACCACGTCAACTAGAAAGAGATAAAATCGAAGACAATAAGCCAGAATTTCATACCAACCCAAACAAATCCAGTAAGAAGAAAGAGCCCGGCATTCCTTGTCGGGCTTCAAAACGACTGGCTGGATCTGAACCCAGGCTGATGAACTCCATATCCTGTGAAAAAGCTTCCAAATGTAAAAGCACAAGGTCTAAAGAAGTCATAGCTGAATTGCAACTAAGTGAGGGTGGGCCAGTTACCAAGCTTACAGACCATGCACCATTACATAGAGAGTCGGGAAATAAAAGAAGAAAATCTCCTAGAATCATACCTGCTGCAGACAAACAAGTGGAAAAACCTGAAGTGGATGATGAGAAATCAGAACCTCAACTGTCCTTTGCATTCCACTACTCTTGGTCTGACCCAAGCTTGGATTATGCAATCAATACCCTCACGGGTGTGTTACCACCAGTTGATAATCCTCTTGATAAGGGACCCTCTACAGTCCCTGAAATTGATATTCTAAAACCTGCATTTGACACTGTCACTGGAAAAAGCAGGGGCAGTCAAAACATTTCAGTTTATAATGGACCCGCTACCGTCCATGAAACTGATATTCAAAAAACATTGTTTGACAACGTTACTAGAGGAAGCAATGACAGTCAAAACAATTTGCTTGACAATGTTACAGAAAGCAGAGACAAAAACCCACTGGTGCAGTCAAAATCCAAGAGAAAGAAAGAGGTCAAAGTCCCTATGCGGTTGTCAAAGCGACTTGCTGGCATTGAACCGGAGGCAAGCCCTTCTGATAAAGCTCTTGAGTATTCCAGTAGAAAACCATGCAAAGAAAAGCCCACTGCAACTGTACTTTTAACTAATGGAGCATCTAACCATCTCTATGGTGGGGAAGAAACCAAGCTTACTCGTCATGTGTCTGAGAGTTTGAAAGCAGAAGTGCTAGGAGAATCATCAAGAAAGTGTGGTAAGTCATATGATACCCAAACTGTTCACAAGGAACAGCAATCGGAGAGAGCTGAAGCTAAACATATTAGTAATGATAGGTCAAAGTCAGAGCTCACTTTACCATTTGGTGAATCCTGGTCAGATCCATGCTTGGAATTTGCATTCAAGACTCTCACTGGTGCTTTGCCGGTTGATTCTTCTGCTGAGTTTTTTAAAGTTTCGACTCCTAGTGTTGGTGAACTGCCAAATAATGAGTTGTATGGGAGAGTGACAACCAGCATGGATAAAAAAGTTCATGACAAAACAAACCAATCCGAAAACAAGAAAGAGCGTAATATGAATGGTCAGTCTTCGAAGATACTGCTTGGGCAACCTGAGTTGAGGACTAGCTCCTTATCCCGAAAAAATATGCCTAAATTCACCAATGGAGAATCTCATAGTCGCGAAAGCAACATGATAAGGAATCTGGAACCTGTGTTGAGGTCTAGCTCCACACCTGGAAAAAGTGTGTCTAAATTAACCACTCAAGAATCTCACAATCATGAAGAGAACATGATGAGGAATTTGTTTGGAGAACCTCTATTTGTTGAAGATGAAAACACAACCCAACTTCTGCATCATTCTAGAACTAATGCATACTCACAAATACATGAAGAGCCATTAAAGAAAAATAACCAGGTTGCTGAGGGGGAATTTGGTACATTGGATCAACCACCGGGTTTTGAAACTAAAGCGTATAACCATGGCAACAGAGAATCTTGTAGTCATGAAGGCAACAACATAAGGAATCTGGAACCTGTGTTGAGGACTAGCTCCACATCTGGAAAAAATGCGTCAACCATTCGAGAATCTCATAATCATGAAGACAGCATAATGAGAAATTTGTTTGGAGAACCTCTATATGTTGAAGATAAAAACACAACCCAACTTCTGCATCGTTCTAGAACTAATGCATACTCACAAATACATGAAGAGCCATTAAAGAAAAATGATCAGGTTGCTGAGGGTGAATTTGGTACATCGGAGCAGCCTCCAGGTTTTGAAACTAAAACGTTAAACAATGGCAATGGAGAATCTCTTAGTCATGAAGGCAACAACATGAGGAACCTGGAACCTGTGTTGAGGACTAGCTCCCCATCTGGAAAAAATGTGTCTAAATTAGCCACTGGAGAATTTCATAGTCACGAAGACAACATAATGATGAGTTTGTTTGGAGAACCTCTGTATGTTGAAGATGAAAACACAACCCAACTTCTGCATCATTCTAGAACTGATGCATACTCACAAATACATGAAGAGCCAGTAAAGAAAAATGACCAGGTTGCTAAGGGTGAATTTGGTACATCGGAGCAACCACCGCCATTTCAAACTGTAACGTTAAACCACGACAATACTGAGTTGCAGTTCTGTGAATCTTTTATGAATTCTTGGTCAGACCCATGCTTAGAATTTGCATTTAAGACTCTTACAGGTGTGATTCCAGTAGAGGAAAATTTAGCAGTTCAAGGGGGTGTCCAGGAACCTGTTAACTGTCATGATGGAGGGGATGGTGTATCAGCGTTGCCAGATTTTGGATCTTCCAGTTTTTCACAAAGTGATTTCTCATTTCACTTTGACACAGGAGGGAAGTCCATGCCAGGGCAGCAGTCATCAATGAGCTCTCCATTCCCATCTCTGAGCCTGCAAGGTTGTCCCGGAGTTGATCCGCAACAACAATATTCCCAGTTCAATAATAATTTTCAAAGACGGTAA
Protein sequence

>Msa0571200

MGKPNVKKSGGTNKRIDNETKRNSKQQTPEKADERPEWLPNGWDIEVRTRQSGPAMGSAYKCYIDPSNTYKFYSKPEVLRHLETIKDRKCSSNKKKGTSKHSPNKEEGKHTKSKQHSPSKEEEKKTKSNQHSPSKEEEKCINMHSPNKGEEKHISMHSPSKDGEKCTNMHSPSNVAGENSIVEDLPPGWIKEVKIRKHRSGIKKDWFYIDPVSGYVFHSKKDVQRFLKSGDIAKCAIKPSRRQYQDEDNSTPSPAAKRQKPKQSTPMQKIFVAKEPVESLELADVNNSRKGQDVNVPSRMMVALDTSGESLKMNHSNHSISKNDVNVSHRFSRRLAGVEPVKLVDNVINDEALLVPKRNLRKNRTTLGADMENKSSQHFKGVPKIEQPNAMDTSNTLSEVVFKEQPRQLERDKIEDNKPEFHTNPNKSSKKKEPGIPCRASKRLAGSEPRLMNSISCEKASKCKSTRSKEVIAELQLSEGGPVTKLTDHAPLHRESGNKRRKSPRIIPAADKQVEKPEVDDEKSEPQLSFAFHYSWSDPSLDYAINTLTGVLPPVDNPLDKGPSTVPEIDILKPAFDTVTGKSRGSQNISVYNGPATVHETDIQKTLFDNVTRGSNDSQNNLLDNVTESRDKNPLVQSKSKRKKEVKVPMRLSKRLAGIEPEASPSDKALEYSSRKPCKEKPTATVLLTNGASNHLYGGEETKLTRHVSESLKAEVLGESSRKCGKSYDTQTVHKEQQSERAEAKHISNDRSKSELTLPFGESWSDPCLEFAFKTLTGALPVDSSAEFFKVSTPSVGELPNNELYGRVTTSMDKKVHDKTNQSENKKERNMNGQSSKILLGQPELRTSSLSRKNMPKFTNGESHSRESNMIRNLEPVLRSSSTPGKSVSKLTTQESHNHEENMMRNLFGEPLFVEDENTTQLLHHSRTNAYSQIHEEPLKKNNQVAEGEFGTLDQPPGFETKAYNHGNRESCSHEGNNIRNLEPVLRTSSTSGKNASTIRESHNHEDSIMRNLFGEPLYVEDKNTTQLLHRSRTNAYSQIHEEPLKKNDQVAEGEFGTSEQPPGFETKTLNNGNGESLSHEGNNMRNLEPVLRTSSPSGKNVSKLATGEFHSHEDNIMMSLFGEPLYVEDENTTQLLHHSRTDAYSQIHEEPVKKNDQVAKGEFGTSEQPPPFQTVTLNHDNTELQFCESFMNSWSDPCLEFAFKTLTGVIPVEENLAVQGGVQEPVNCHDGGDGVSALPDFGSSSFSQSDFSFHFDTGGKSMPGQQSSMSSPFPSLSLQGCPGVDPQQQYSQFNNNFQRR*