Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0571490 | XP_003630512.1 | 98.232 | 509 | 8 | 1 | 1 | 509 | 1 | 508 | 0.0 | 1037 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0571490 | sp|Q9ZNX6|GSH1_MEDTR | 98.232 | 509 | 8 | 1 | 1 | 509 | 1 | 508 | 0.0 | 1037 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0571490 | G7LHC5 | 98.232 | 509 | 8 | 1 | 1 | 509 | 1 | 508 | 0.0 | 1037 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0571490 | Msa0660320 | 0.843859 | 1.081147e-58 | -8.615850e-47 |
| Msa0571490 | Msa1306730 | 0.870853 | 1.066140e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0571490 | MtrunA17_Chr8g0386791 | 98.232 | 509 | 8 | 1 | 1 | 509 | 1 | 508 | 0.0 | 1037 |
| Msa0571490 | MtrunA17_Chr5g0397471 | 68.467 | 463 | 146 | 0 | 47 | 509 | 50 | 512 | 0.0 | 675 |
| Msa0571490 | MtrunA17_Chr5g0397441 | 64.242 | 165 | 59 | 0 | 345 | 509 | 1 | 165 | 8.01e-69 | 218 |
| Msa0571490 | MtrunA17_Chr5g0397431 | 60.769 | 130 | 50 | 1 | 190 | 319 | 1 | 129 | 3.27e-54 | 179 |
| Msa0571490 | MtrunA17_Chr5g0397421 | 79.545 | 88 | 18 | 0 | 96 | 183 | 10 | 97 | 1.32e-45 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0571490 | AT4G23100.3 | 83.918 | 485 | 77 | 1 | 26 | 509 | 38 | 522 | 0.0 | 861 |
| Msa0571490 | AT4G23100.1 | 83.918 | 485 | 77 | 1 | 26 | 509 | 38 | 522 | 0.0 | 861 |
| Msa0571490 | AT4G23100.2 | 84.296 | 433 | 67 | 1 | 26 | 457 | 38 | 470 | 0.0 | 775 |
Find 151 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGAAAGAAGAGGCTTTA+AGG | 0.162482 | 4_1:-74116856 | Msa0571490:CDS |
| AATGATTCTCCCAATCATTA+AGG | 0.238191 | 4_1:+74118471 | None:intergenic |
| GGTTAGGCTAAAGAGGTATT+TGG | 0.243859 | 4_1:-74118320 | Msa0571490:CDS |
| AAACCTGAAACAGCCATATT+TGG | 0.248294 | 4_1:-74119323 | Msa0571490:intron |
| CACTCCAGCTGAGAGGCTTT+TGG | 0.263032 | 4_1:-74116059 | Msa0571490:CDS |
| AAGAGAAATGCTAAGGAATA+AGG | 0.286293 | 4_1:-74117967 | Msa0571490:intron |
| ATGGAAGGTGATAACATTAT+TGG | 0.299516 | 4_1:-74120919 | Msa0571490:CDS |
| GGTTTCTTTGCAACGTGTTT+TGG | 0.299905 | 4_1:-74118018 | Msa0571490:CDS |
| GATATTTGCTCATACTTCAT+AGG | 0.304143 | 4_1:+74120988 | None:intergenic |
| CATGCCTGTGCGGTCCTTAT+CGG | 0.316010 | 4_1:+74119293 | None:intergenic |
| TATGTGCTTTACCAGCATTT+TGG | 0.319362 | 4_1:-74118261 | Msa0571490:CDS |
| TTGCTATACTAAGGTGTATT+CGG | 0.322165 | 4_1:-74115986 | Msa0571490:exon |
| GGTACTGAACATGAAAAGTT+TGG | 0.334434 | 4_1:-74121033 | Msa0571490:CDS |
| ATGCCTAAAGTTGGTTCTCT+TGG | 0.339211 | 4_1:-74119803 | Msa0571490:CDS |
| TATCGGTATCAGTCCAAATA+TGG | 0.340970 | 4_1:+74119310 | None:intergenic |
| AGAAGAGGCTTTAAGGAATC+AGG | 0.344244 | 4_1:-74116849 | Msa0571490:CDS |
| CTCTGGCAGGTCACCGTAAC+CGG | 0.345887 | 4_1:-74117025 | Msa0571490:intron |
| CTCATCGATTATCTCGCTTC+TGG | 0.346530 | 4_1:-74122448 | Msa0571490:CDS |
| GGAAAGCTTCCTTGTATTCC+TGG | 0.357140 | 4_1:-74118506 | Msa0571490:CDS |
| CTTTGCGTTCCCACTTTGGC+TGG | 0.367217 | 4_1:+74120295 | None:intergenic |
| TAAAGCTGTTGCTGAGGAAA+TGG | 0.367989 | 4_1:-74120343 | Msa0571490:CDS |
| TTGGGCTTGACATGATGTTC+AGG | 0.368172 | 4_1:-74119784 | Msa0571490:CDS |
| GTTGTAAAACCAAGGATAAA+TGG | 0.370943 | 4_1:-74122426 | Msa0571490:CDS |
| TGCCTAAAGTTGGTTCTCTT+GGG | 0.371507 | 4_1:-74119802 | Msa0571490:CDS |
| ACTGTACTGGAATGACCTTC+AGG | 0.375014 | 4_1:-74118698 | Msa0571490:CDS |
| AAAACTACCTTTGGCATCAT+AGG | 0.377899 | 4_1:+74120267 | None:intergenic |
| CGTGTTTATACAGGTAAATC+TGG | 0.378538 | 4_1:-74119646 | Msa0571490:intron |
| GGTGGTCAGTTTGAACTTAG+TGG | 0.399459 | 4_1:-74120704 | Msa0571490:CDS |
| TTCTAATTTCAATACTATCA+TGG | 0.399674 | 4_1:-74122707 | Msa0571490:exon |
| AATTACCGACCCTTAATGAT+TGG | 0.403403 | 4_1:-74118481 | Msa0571490:CDS |
| CACCACATAACTTCCATATT+CGG | 0.407294 | 4_1:-74122630 | Msa0571490:CDS |
| TAGAGTGTCCTTACTGTAAA+GGG | 0.408751 | 4_1:-74123075 | Msa0571490:five_prime_UTR |
| TGGAATTGTATCATGGAAAG+TGG | 0.417984 | 4_1:-74116039 | Msa0571490:CDS |
| TGGTGTCTTTAGACCGGTTA+CGG | 0.418673 | 4_1:+74117012 | None:intergenic |
| ATGAGATCCTGTTTGGTAAG+AGG | 0.418851 | 4_1:+74122466 | None:intergenic |
| GTTGCTGAGGAAATGGGAAT+TGG | 0.427076 | 4_1:-74120336 | Msa0571490:CDS |
| CACGCACCTCCATTTATCCT+TGG | 0.429045 | 4_1:+74122417 | None:intergenic |
| ATCTCACAAGAGAGATAGCC+AGG | 0.430652 | 4_1:+74115871 | None:intergenic |
| TAACATTATTGGACTCAAAC+AGG | 0.431305 | 4_1:-74120908 | Msa0571490:intron |
| GAAAGAGAAAGTGTTAGAAA+TGG | 0.431494 | 4_1:+74122597 | None:intergenic |
| AAAGTTCGTTCAAACAACTT+TGG | 0.433129 | 4_1:+74115730 | None:intergenic |
| AAGAAATATATCGACTGTAC+TGG | 0.433749 | 4_1:-74118711 | Msa0571490:CDS |
| CTTTCCAGGTTAGGCTAAAG+AGG | 0.433938 | 4_1:-74118327 | Msa0571490:intron |
| GTTCTGAAGCTGACATGATC+AGG | 0.438098 | 4_1:-74119617 | Msa0571490:CDS |
| TGCGTGAAGAAAAGAAGAAA+GGG | 0.453465 | 4_1:+74122790 | None:intergenic |
| AGAGAAAGTGTTAGAAATGG+TGG | 0.456396 | 4_1:+74122600 | None:intergenic |
| TACTGAACCTCTTACCAAAC+AGG | 0.458876 | 4_1:-74122473 | Msa0571490:CDS |
| TTCTTTCACATTTCTGTGGG+AGG | 0.465939 | 4_1:-74115953 | Msa0571490:three_prime_UTR |
| ATGATTCTCCCAATCATTAA+GGG | 0.470462 | 4_1:+74118472 | None:intergenic |
| ATAGAGTGTCCTTACTGTAA+AGG | 0.471034 | 4_1:-74123076 | Msa0571490:five_prime_UTR |
| AATTGAATTAGTCTCCAGTC+TGG | 0.479048 | 4_1:+74115693 | None:intergenic |
| ATAATCGATGAGATCCTGTT+TGG | 0.479852 | 4_1:+74122459 | None:intergenic |
| ATTACCGACCCTTAATGATT+GGG | 0.480585 | 4_1:-74118480 | Msa0571490:CDS |
| TTACTGTAGGACTTCTTGGC+AGG | 0.481332 | 4_1:-74118527 | Msa0571490:intron |
| AGAAAAGAAGAAAGGGGAAA+TGG | 0.485093 | 4_1:+74122797 | None:intergenic |
| AGCCCAAGAGAACCAACTTT+AGG | 0.487542 | 4_1:+74119800 | None:intergenic |
| TTTGACGAATTGCTATACTA+AGG | 0.490910 | 4_1:-74115995 | Msa0571490:exon |
| AATGAATCTACGACCACCAC+TGG | 0.490920 | 4_1:+74122534 | None:intergenic |
| ATTGGGCTTTCCATCTGTGA+AGG | 0.493504 | 4_1:+74119452 | None:intergenic |
| CACAAACTCACCCAAAATGC+TGG | 0.496129 | 4_1:+74118250 | None:intergenic |
| CTCATACTAACAAACCCATT+GGG | 0.497890 | 4_1:+74119435 | None:intergenic |
| AGTATGAAGGAGTGAATCAA+AGG | 0.500845 | 4_1:-74122830 | Msa0571490:five_prime_UTR |
| TCACAGATGGAAAGCCCAAT+GGG | 0.501872 | 4_1:-74119449 | Msa0571490:CDS |
| TTCAGCAAACCATCTCGAAA+TGG | 0.502074 | 4_1:+74116992 | None:intergenic |
| ACAAACCTCGGGAAATATAG+TGG | 0.505786 | 4_1:+74118445 | None:intergenic |
| TATGTATCTACAGGATGGCT+TGG | 0.508849 | 4_1:-74116874 | Msa0571490:intron |
| GCTGAAGCATGTTGCTGAAG+AGG | 0.509896 | 4_1:-74116975 | Msa0571490:CDS |
| AATTCCAAAAGCCTCTCAGC+TGG | 0.510828 | 4_1:+74116055 | None:intergenic |
| GTCGTGGCGGAGAGAGGGAG+AGG | 0.513035 | 4_1:+74122657 | None:intergenic |
| TTCCGAATATGGAAGTTATG+TGG | 0.513238 | 4_1:+74122628 | None:intergenic |
| GAGGTGCTGATGGAGGGCCT+TGG | 0.514200 | 4_1:-74118291 | Msa0571490:CDS |
| GTAGCTGAGGTGGTTAGAAC+AGG | 0.514281 | 4_1:-74116813 | Msa0571490:intron |
| TTGGAGATGAGAGGTGCTGA+TGG | 0.515883 | 4_1:-74118301 | Msa0571490:CDS |
| GCAAATTCACCCTTCACAGA+TGG | 0.516671 | 4_1:-74119462 | Msa0571490:CDS |
| AAAGCTGTTGCTGAGGAAAT+GGG | 0.518116 | 4_1:-74120342 | Msa0571490:CDS |
| ATGTCTTTGCGTTCCCACTT+TGG | 0.523621 | 4_1:+74120291 | None:intergenic |
| CTGATGGAGGGCCTTGGAGA+AGG | 0.524829 | 4_1:-74118285 | Msa0571490:CDS |
| ATGAAAGACTAACTTGATAG+AGG | 0.525706 | 4_1:+74120633 | None:intergenic |
| TTGCGTGAAGAAAAGAAGAA+AGG | 0.527283 | 4_1:+74122789 | None:intergenic |
| TGTTGCGTCGTGGCGGAGAG+AGG | 0.528061 | 4_1:+74122651 | None:intergenic |
| TTCCGATAGACAAAATACAT+TGG | 0.532084 | 4_1:+74118735 | None:intergenic |
| TTCTTACAGGCTGCAAAGCT+AGG | 0.533448 | 4_1:+74119580 | None:intergenic |
| CTGTACTGGAATGACCTTCA+GGG | 0.536065 | 4_1:-74118697 | Msa0571490:intron |
| TGCTGAAGAGGTTCTAGAGC+TGG | 0.536393 | 4_1:-74116963 | Msa0571490:CDS |
| CAAATATCAGAATTGCTGAA+TGG | 0.537319 | 4_1:-74120973 | Msa0571490:CDS |
| TCGAAATGGTGTCTTTAGAC+CGG | 0.540053 | 4_1:+74117006 | None:intergenic |
| GGAAAAGTTACAAGGATGGA+TGG | 0.544870 | 4_1:-74123054 | Msa0571490:five_prime_UTR |
| AAACTCTGGCTATATAGTCC+TGG | 0.546182 | 4_1:-74115889 | Msa0571490:three_prime_UTR |
| CAGAGCATATCATTAGAGCC+AGG | 0.549413 | 4_1:-74120725 | Msa0571490:CDS |
| AAGAGAATCGTTACTTCCAG+TGG | 0.550025 | 4_1:-74122550 | Msa0571490:CDS |
| TTGGGCTTTCCATCTGTGAA+GGG | 0.550187 | 4_1:+74119453 | None:intergenic |
| GGAATTGTATCATGGAAAGT+GGG | 0.552480 | 4_1:-74116038 | Msa0571490:CDS |
| CTGTAAAGGGAAAAGTTACA+AGG | 0.553222 | 4_1:-74123062 | Msa0571490:five_prime_UTR |
| TCTCATACTAACAAACCCAT+TGG | 0.558109 | 4_1:+74119434 | None:intergenic |
| GTTGCGTCGTGGCGGAGAGA+GGG | 0.559248 | 4_1:+74122652 | None:intergenic |
| TAGAAGAAAGAGAAATGCTA+AGG | 0.561246 | 4_1:-74117974 | Msa0571490:CDS |
| TAGAATCGTGTGTAAAACTC+TGG | 0.561580 | 4_1:-74115903 | Msa0571490:three_prime_UTR |
| GGTAATTCACCAGGAATACA+AGG | 0.562503 | 4_1:+74118497 | None:intergenic |
| TTCACAGATGGAAAGCCCAA+TGG | 0.563301 | 4_1:-74119450 | Msa0571490:CDS |
| ATGGGTTTGTTAGTATGAGA+AGG | 0.567979 | 4_1:-74119431 | Msa0571490:intron |
| TATTTGGACTGATACCGATA+AGG | 0.568294 | 4_1:-74119307 | Msa0571490:CDS |
| GCAACAACAGCATCTTCAGT+AGG | 0.569442 | 4_1:+74122496 | None:intergenic |
| ATAATAGCTACAAGAAGCAT+AGG | 0.571258 | 4_1:-74122921 | Msa0571490:five_prime_UTR |
| GAAAGTGTTAGAAATGGTGG+AGG | 0.574014 | 4_1:+74122603 | None:intergenic |
| ATAGGTTAAAGCTGTTGCTG+AGG | 0.574248 | 4_1:-74120349 | Msa0571490:intron |
| CTAAAGACACCATTTCGAGA+TGG | 0.576781 | 4_1:-74117001 | Msa0571490:CDS |
| ATTTGACTGGGATAAAGTAA+TGG | 0.577539 | 4_1:-74120938 | Msa0571490:CDS |
| AGCTAGTATTTAATTCATGT+CGG | 0.579380 | 4_1:-74115787 | Msa0571490:three_prime_UTR |
| TCTAAATGCGGTAGCTGAGG+TGG | 0.582814 | 4_1:-74116823 | Msa0571490:CDS |
| CTAAGTTCAAACTGACCACC+TGG | 0.583250 | 4_1:+74120707 | None:intergenic |
| AAGTTACAAGGATGGATGGA+TGG | 0.584462 | 4_1:-74123050 | Msa0571490:five_prime_UTR |
| GACTGGGATAAAGTAATGGA+AGG | 0.584694 | 4_1:-74120934 | Msa0571490:CDS |
| TAGCTACAAGAAGCATAGGT+AGG | 0.587866 | 4_1:-74122917 | Msa0571490:five_prime_UTR |
| CGCTTCTGGTTGTAAAACCA+AGG | 0.589930 | 4_1:-74122434 | Msa0571490:CDS |
| CAGGATGGCTTGGAAAGAAG+AGG | 0.591818 | 4_1:-74116864 | Msa0571490:CDS |
| AGTCTATTCAGAGAGTATGA+AGG | 0.593770 | 4_1:-74122843 | Msa0571490:five_prime_UTR |
| GTTCAGGACATGCACTGTAC+AGG | 0.593879 | 4_1:-74119768 | Msa0571490:intron |
| ATGATCAGGAAATTTCGTGC+TGG | 0.595037 | 4_1:-74119603 | Msa0571490:CDS |
| AAAGGGAAAAGTTACAAGGA+TGG | 0.598233 | 4_1:-74123058 | Msa0571490:five_prime_UTR |
| TTAAGGGTCGGTAATTCACC+AGG | 0.604160 | 4_1:+74118488 | None:intergenic |
| GATTGGTTTCCAGCCAAAGT+GGG | 0.608140 | 4_1:-74120304 | Msa0571490:CDS |
| GTCTGATGCAGAGTTTCAAG+AGG | 0.610010 | 4_1:+74120677 | None:intergenic |
| CAGGTGTCACTCCAGCTGAG+AGG | 0.611225 | 4_1:-74116066 | Msa0571490:CDS |
| GCGTGAAGAAAAGAAGAAAG+GGG | 0.611568 | 4_1:+74122791 | None:intergenic |
| ATTTCTAAATGCGGTAGCTG+AGG | 0.618045 | 4_1:-74116826 | Msa0571490:CDS |
| GGATTGGTTTCCAGCCAAAG+TGG | 0.618644 | 4_1:-74120305 | Msa0571490:CDS |
| ACAACAGCATCTTCAGTAGG+AGG | 0.620446 | 4_1:+74122499 | None:intergenic |
| CATTGCTGAGAGATTTGACT+GGG | 0.621451 | 4_1:-74120950 | Msa0571490:CDS |
| AGGATAGATGAGAACCCTGA+AGG | 0.624015 | 4_1:+74118683 | None:intergenic |
| GCATTGCTGAGAGATTTGAC+TGG | 0.627930 | 4_1:-74120951 | Msa0571490:CDS |
| TTCTCCCAATCATTAAGGGT+CGG | 0.628384 | 4_1:+74118476 | None:intergenic |
| GAGATGAGAGGTGCTGATGG+AGG | 0.629565 | 4_1:-74118298 | Msa0571490:CDS |
| AGATGAGAGGTGCTGATGGA+GGG | 0.638194 | 4_1:-74118297 | Msa0571490:CDS |
| AAGAGGTATTTGGAGATGAG+AGG | 0.640411 | 4_1:-74118310 | Msa0571490:CDS |
| GAACTGAGTAACGGAACAAG+CGG | 0.640513 | 4_1:-74122878 | Msa0571490:five_prime_UTR |
| AGACATACCTATGATGCCAA+AGG | 0.645310 | 4_1:-74120274 | Msa0571490:intron |
| TCTGATGCAGAGTTTCAAGA+GGG | 0.645543 | 4_1:+74120678 | None:intergenic |
| AAAGCACATAACCTTCTCCA+AGG | 0.645896 | 4_1:+74118274 | None:intergenic |
| CAAAAGGCAGCATGCCTGTG+CGG | 0.646851 | 4_1:+74119283 | None:intergenic |
| TCGAAGAAAGAACTGAGTAA+CGG | 0.649982 | 4_1:-74122887 | Msa0571490:five_prime_UTR |
| TTTGACCACTATATTTCCCG+AGG | 0.655534 | 4_1:-74118450 | Msa0571490:intron |
| AGAATCGTTACTTCCAGTGG+TGG | 0.656440 | 4_1:-74122547 | Msa0571490:CDS |
| GATACCGATAAGGACCGCAC+AGG | 0.662653 | 4_1:-74119297 | Msa0571490:CDS |
| GGTAGGGATATTGTACGATG+AGG | 0.665122 | 4_1:-74118039 | Msa0571490:CDS |
| GTAAAACCAAGGATAAATGG+AGG | 0.667037 | 4_1:-74122423 | Msa0571490:intron |
| AGAGGTTCTAGAGCTGGCAA+AGG | 0.684570 | 4_1:-74116957 | Msa0571490:intron |
| AGTTATGTGGTGTTGCGTCG+TGG | 0.686687 | 4_1:+74122641 | None:intergenic |
| GGAATCAGGATTTCTAAATG+CGG | 0.688658 | 4_1:-74116835 | Msa0571490:CDS |
| TATGTGGTGTTGCGTCGTGG+CGG | 0.701231 | 4_1:+74122644 | None:intergenic |
| AGCATATCATTAGAGCCAGG+TGG | 0.733348 | 4_1:-74120722 | Msa0571490:CDS |
| CTGATGCAGAGTTTCAAGAG+GGG | 0.736237 | 4_1:+74120679 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATAATAATAATTA+GGG | + | chr4_1:74116025-74116044 | None:intergenic | 0.0% |
| !! | TAATAATAATAATAATAATT+AGG | + | chr4_1:74116026-74116045 | None:intergenic | 0.0% |
| !!! | ATTTTTTTTTTTTTTACTGT+AGG | - | chr4_1:74120240-74120259 | Msa0571490:intron | 10.0% |
| !!! | TATGTGTTTAATATTTTTTA+TGG | - | chr4_1:74122688-74122707 | Msa0571490:CDS | 10.0% |
| !!! | ATGCTAATTTTTTAATTGAA+AGG | - | chr4_1:74115817-74115836 | Msa0571490:three_prime_UTR | 15.0% |
| !!! | ATAAAAACATAGTGTATTTT+TGG | - | chr4_1:74117036-74117055 | Msa0571490:intron | 15.0% |
| !! | ACAAATCTATAAGAATTTAT+GGG | + | chr4_1:74117303-74117322 | None:intergenic | 15.0% |
| !!! | TAATATGTTATTTTTCCATT+AGG | - | chr4_1:74118193-74118212 | Msa0571490:intron | 15.0% |
| !!! | AATATGTTATTTTTCCATTA+GGG | - | chr4_1:74118194-74118213 | Msa0571490:intron | 15.0% |
| !!! | CTTTTGACATTATTATTTAT+AGG | - | chr4_1:74118413-74118432 | Msa0571490:intron | 15.0% |
| !!! | CTTTTATCCATTTTAAAAAT+AGG | + | chr4_1:74118612-74118631 | None:intergenic | 15.0% |
| !!! | TTTTAACTTTCAACAAAAAA+TGG | - | chr4_1:74118698-74118717 | Msa0571490:CDS | 15.0% |
| !! | TTAATAAAGCAACATTAAAA+AGG | + | chr4_1:74119416-74119435 | None:intergenic | 15.0% |
| !!! | TTTTTAATGTTGCTTTATTA+AGG | - | chr4_1:74119415-74119434 | Msa0571490:intron | 15.0% |
| !!! | TTTAAAAACAGTTTTATCAA+TGG | - | chr4_1:74119924-74119943 | Msa0571490:intron | 15.0% |
| !!! | TATTAGTTTTACAATTTAAC+TGG | - | chr4_1:74120361-74120380 | Msa0571490:intron | 15.0% |
| !!! | TATTTCAATTTTTACTTGTT+AGG | - | chr4_1:74121180-74121199 | Msa0571490:intron | 15.0% |
| !!! | ATTTCAATTTTTACTTGTTA+GGG | - | chr4_1:74121181-74121200 | Msa0571490:intron | 15.0% |
| !!! | TTTTTTAAAAAAAAACAAGG+AGG | + | chr4_1:74121543-74121562 | None:intergenic | 15.0% |
| !! | ATTCATAATTTATATCTAGT+TGG | - | chr4_1:74122087-74122106 | Msa0571490:intron | 15.0% |
| !! | ATATATGTACTAACATAATA+TGG | + | chr4_1:74122267-74122286 | None:intergenic | 15.0% |
| !! | TTCTAATTTCAATACTATCA+TGG | - | chr4_1:74116073-74116092 | Msa0571490:intron | 20.0% |
| !! | CACTTTATATTTGTTTGATT+AGG | - | chr4_1:74116614-74116633 | Msa0571490:intron | 20.0% |
| !! | TTTATTAACTGATAGTAATG+AGG | + | chr4_1:74117021-74117040 | None:intergenic | 20.0% |
| !! | CACAAATCTATAAGAATTTA+TGG | + | chr4_1:74117304-74117323 | None:intergenic | 20.0% |
| !! | CAATAACTAATAGTATTACA+AGG | + | chr4_1:74117407-74117426 | None:intergenic | 20.0% |
| !! | AAATTATGACACAATATAAG+AGG | + | chr4_1:74117677-74117696 | None:intergenic | 20.0% |
| !!! | AATAATAGATGGCTAAATTT+TGG | - | chr4_1:74118316-74118335 | Msa0571490:CDS | 20.0% |
| !!! | AACACAACCTATTTTTAAAA+TGG | - | chr4_1:74118602-74118621 | Msa0571490:intron | 20.0% |
| !! | TAATTGAATTGAGTTAGTTA+AGG | + | chr4_1:74118899-74118918 | None:intergenic | 20.0% |
| !!! | CTTTTCATAGTGTTTAAATT+AGG | + | chr4_1:74119081-74119100 | None:intergenic | 20.0% |
| !! | AAAATATCAATGTTTCTTAC+AGG | + | chr4_1:74119216-74119235 | None:intergenic | 20.0% |
| !! | ATATTGTTATCTCTTTCTTT+AGG | - | chr4_1:74119791-74119810 | Msa0571490:CDS | 20.0% |
| !! | AAACTAATAAAAACAAACCT+CGG | + | chr4_1:74120350-74120369 | None:intergenic | 20.0% |
| !! | AATGAAGAAAAATTATTGCA+AGG | + | chr4_1:74120845-74120864 | None:intergenic | 20.0% |
| !!! | TTGAAAGAAAAGCTATTTTT+GGG | + | chr4_1:74120909-74120928 | None:intergenic | 20.0% |
| !!! | ATTGAAAGAAAAGCTATTTT+TGG | + | chr4_1:74120910-74120929 | None:intergenic | 20.0% |
| !! | TTAATTTCAGAAATAGTCAT+TGG | - | chr4_1:74121375-74121394 | Msa0571490:intron | 20.0% |
| !! | TAATTTCAGAAATAGTCATT+GGG | - | chr4_1:74121376-74121395 | Msa0571490:intron | 20.0% |
| !!! | AGTTAACAATCACTTTTTAT+GGG | + | chr4_1:74121507-74121526 | None:intergenic | 20.0% |
| !!! | TAGTTAACAATCACTTTTTA+TGG | + | chr4_1:74121508-74121527 | None:intergenic | 20.0% |
| !!! | CGTTTGTTTTAGATTTTTTT+AGG | + | chr4_1:74121691-74121710 | None:intergenic | 20.0% |
| !! | AGAAATTTAGTATGGATAAT+GGG | + | chr4_1:74121716-74121735 | None:intergenic | 20.0% |
| !! | TAGAAATTTAGTATGGATAA+TGG | + | chr4_1:74121717-74121736 | None:intergenic | 20.0% |
| !! | ATCAGTATAGAAATTTAGTA+TGG | + | chr4_1:74121724-74121743 | None:intergenic | 20.0% |
| !! | TAAATTTCTATACTGATAAC+CGG | - | chr4_1:74121727-74121746 | Msa0571490:intron | 20.0% |
| !! | TAGTACATATATCTCTATAA+TGG | - | chr4_1:74122275-74122294 | Msa0571490:intron | 20.0% |
| !! | AGTACATATATCTCTATAAT+GGG | - | chr4_1:74122276-74122295 | Msa0571490:intron | 20.0% |
| !!! | GATCAAAGTTATTTTTTTCT+TGG | - | chr4_1:74122510-74122529 | Msa0571490:CDS | 20.0% |
| !! | AAATTAACTAATGCAATCAT+TGG | - | chr4_1:74122630-74122649 | Msa0571490:CDS | 20.0% |
| !! | AAATATTAAACACATACCAA+AGG | + | chr4_1:74122684-74122703 | None:intergenic | 20.0% |
| !!! | GTGTTTAATATTTTTTATGG+TGG | - | chr4_1:74122691-74122710 | Msa0571490:CDS | 20.0% |
| !!! | AGAATATTGTTAGAAGTGTT+AGG | + | chr4_1:74117235-74117254 | None:intergenic | 25.0% |
| !!! | TGCTTTAGAAAATCAACAAA+TGG | + | chr4_1:74117482-74117501 | None:intergenic | 25.0% |
| !!! | TTCTAAAGCAACAAATGAAA+TGG | - | chr4_1:74117492-74117511 | Msa0571490:intron | 25.0% |
| !! | TCTAAAGCAACAAATGAAAT+GGG | - | chr4_1:74117493-74117512 | Msa0571490:intron | 25.0% |
| !! | TCCATTAGGGAAATAAATTT+TGG | - | chr4_1:74118207-74118226 | Msa0571490:intron | 25.0% |
| ! | TCCAAAATTTATTTCCCTAA+TGG | + | chr4_1:74118211-74118230 | None:intergenic | 25.0% |
| ! | AAAAAATACATGCCTAAAGT+TGG | - | chr4_1:74118968-74118987 | Msa0571490:intron | 25.0% |
| !!! | TGTTTCAGGTTTATGAAAAT+GGG | + | chr4_1:74119449-74119468 | None:intergenic | 25.0% |
| !! | TTTCTATGCCTTCTAATTTT+AGG | - | chr4_1:74119587-74119606 | Msa0571490:CDS | 25.0% |
| ! | TCCTTCATATAAAGTGTATT+TGG | - | chr4_1:74119657-74119676 | Msa0571490:intron | 25.0% |
| ! | TCCAAATACACTTTATATGA+AGG | + | chr4_1:74119661-74119680 | None:intergenic | 25.0% |
| ! | TTGGAAATATACACATTGAA+TGG | - | chr4_1:74119676-74119695 | Msa0571490:intron | 25.0% |
| !! | TTCCAATGTATTTTGTCTAT+CGG | - | chr4_1:74120043-74120062 | Msa0571490:intron | 25.0% |
| ! | AACTAATAAAAACAAACCTC+GGG | + | chr4_1:74120349-74120368 | None:intergenic | 25.0% |
| ! | AAGCTGAAAAAATTATGAAG+TGG | - | chr4_1:74121154-74121173 | Msa0571490:intron | 25.0% |
| !! | GATAAATATGATTTGAAACC+TGG | - | chr4_1:74121220-74121239 | Msa0571490:intron | 25.0% |
| !!! | CTCTAAAATGAAAAGCTATT+AGG | + | chr4_1:74121588-74121607 | None:intergenic | 25.0% |
| !! | TGTCATTTAAGTGTTTGTTT+AGG | + | chr4_1:74121649-74121668 | None:intergenic | 25.0% |
| ! | GTACATATATCTCTATAATG+GGG | - | chr4_1:74122277-74122296 | Msa0571490:intron | 25.0% |
| ! | TATATGTACTATTAAGAGTC+CGG | + | chr4_1:74122305-74122324 | None:intergenic | 25.0% |
| ! | ATGCTATAATATTTGAGAGT+TGG | - | chr4_1:74122549-74122568 | Msa0571490:CDS | 25.0% |
| !!! | TTAATATTTTTTATGGTGGC+AGG | - | chr4_1:74122695-74122714 | Msa0571490:exon | 25.0% |
| !!! | ATCTGATGTATTTTTTTGCT+TGG | - | chr4_1:74122954-74122973 | Msa0571490:five_prime_UTR | 25.0% |
| ! | AGCTAGTATTTAATTCATGT+CGG | - | chr4_1:74122993-74123012 | Msa0571490:five_prime_UTR | 25.0% |
| ! | TAACTTTTCCCTTTACAGTA+AGG | + | chr4_1:74115716-74115735 | None:intergenic | 30.0% |
| AAGTGAATGAAAAAGAGAAG+TGG | - | chr4_1:74115769-74115788 | Msa0571490:three_prime_UTR | 30.0% | |
| ! | ATAATAGCTACAAGAAGCAT+AGG | - | chr4_1:74115859-74115878 | Msa0571490:three_prime_UTR | 30.0% |
| !! | GAAAGAGAAAGTGTTAGAAA+TGG | + | chr4_1:74116186-74116205 | None:intergenic | 30.0% |
| GTTGTAAAACCAAGGATAAA+TGG | - | chr4_1:74116354-74116373 | Msa0571490:intron | 30.0% | |
| AGTCTCAGAAGAATATCATT+AGG | - | chr4_1:74116708-74116727 | Msa0571490:intron | 30.0% | |
| !!! | ATAGTGTATTTTTGGTTCTG+CGG | - | chr4_1:74117044-74117063 | Msa0571490:intron | 30.0% |
| AAAAAAAACAGCGCTTCAAA+CGG | - | chr4_1:74117353-74117372 | Msa0571490:intron | 30.0% | |
| ATCTTTGTCGCATTTATCAA+TGG | - | chr4_1:74117432-74117451 | Msa0571490:intron | 30.0% | |
| ! | ACTTTTATCCATCACTTCAA+AGG | + | chr4_1:74117530-74117549 | None:intergenic | 30.0% |
| !! | TTTGAAGTGATGGATAAAAG+TGG | - | chr4_1:74117529-74117548 | Msa0571490:intron | 30.0% |
| ! | AATTTGTTTGTCTTCTCTTC+AGG | - | chr4_1:74117692-74117711 | Msa0571490:intron | 30.0% |
| GATATTTGCTCATACTTCAT+AGG | + | chr4_1:74117795-74117814 | None:intergenic | 30.0% | |
| CAAATATCAGAATTGCTGAA+TGG | - | chr4_1:74117807-74117826 | Msa0571490:intron | 30.0% | |
| ATTTGACTGGGATAAAGTAA+TGG | - | chr4_1:74117842-74117861 | Msa0571490:intron | 30.0% | |
| ATGGAAGGTGATAACATTAT+TGG | - | chr4_1:74117861-74117880 | Msa0571490:intron | 30.0% | |
| TAACATTATTGGACTCAAAC+AGG | - | chr4_1:74117872-74117891 | Msa0571490:intron | 30.0% | |
| ATGAAAGACTAACTTGATAG+AGG | + | chr4_1:74118150-74118169 | None:intergenic | 30.0% | |
| !! | CTGAGTTCTGAAATAATAGA+TGG | - | chr4_1:74118305-74118324 | Msa0571490:CDS | 30.0% |
| CAGATCTGAAAGAAATATCT+TGG | + | chr4_1:74118383-74118402 | None:intergenic | 30.0% | |
| ! | GAAATGGGAATTGGATTTTT+GGG | - | chr4_1:74118453-74118472 | Msa0571490:CDS | 30.0% |
| ! | AAATGGGAATTGGATTTTTG+GGG | - | chr4_1:74118454-74118473 | Msa0571490:CDS | 30.0% |
| AGTTCAAGGACTTAAAAATG+AGG | + | chr4_1:74118546-74118565 | None:intergenic | 30.0% | |
| AACTATTTAATCCTGATGTC+AGG | + | chr4_1:74118677-74118696 | None:intergenic | 30.0% | |
| GCTCAAATGTTACTAAGAAA+AGG | + | chr4_1:74118799-74118818 | None:intergenic | 30.0% | |
| GTCATTGTTAAGTTACTAAG+TGG | + | chr4_1:74118860-74118879 | None:intergenic | 30.0% | |
| ACTATGAAAAGAATATCGTC+TGG | - | chr4_1:74119090-74119109 | Msa0571490:intron | 30.0% | |
| !! | CTGTTTCAGGTTTATGAAAA+TGG | + | chr4_1:74119450-74119469 | None:intergenic | 30.0% |
| AAGGAGTCATCAAAAACAAA+AGG | + | chr4_1:74119516-74119535 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTTGATGACTCCTT+CGG | - | chr4_1:74119516-74119535 | Msa0571490:intron | 30.0% |
| AAAAAAAATCACTTACCCGA+AGG | + | chr4_1:74119535-74119554 | None:intergenic | 30.0% | |
| AATATACACATTGAATGGCT+AGG | - | chr4_1:74119681-74119700 | Msa0571490:intron | 30.0% | |
| GAGTTCGAAAACAAAATAAG+TGG | + | chr4_1:74119981-74120000 | None:intergenic | 30.0% | |
| TTCCGATAGACAAAATACAT+TGG | + | chr4_1:74120048-74120067 | None:intergenic | 30.0% | |
| ! | AAGAAATATATCGACTGTAC+TGG | - | chr4_1:74120069-74120088 | Msa0571490:intron | 30.0% |
| CTAAGATGACACGAATATTA+AGG | + | chr4_1:74120120-74120139 | None:intergenic | 30.0% | |
| CTTAATATTCGTGTCATCTT+AGG | - | chr4_1:74120118-74120137 | Msa0571490:intron | 30.0% | |
| TTCACAATGAAGAATGACAA+GGG | + | chr4_1:74120161-74120180 | None:intergenic | 30.0% | |
| TTTCACAATGAAGAATGACA+AGG | + | chr4_1:74120162-74120181 | None:intergenic | 30.0% | |
| !!! | TTTTTTACTGTAGGACTTCT+TGG | - | chr4_1:74120249-74120268 | Msa0571490:intron | 30.0% |
| ATGATTCTCCCAATCATTAA+GGG | + | chr4_1:74120311-74120330 | None:intergenic | 30.0% | |
| AATGATTCTCCCAATCATTA+AGG | + | chr4_1:74120312-74120331 | None:intergenic | 30.0% | |
| ACTTAAACATTACTCTTTCC+AGG | - | chr4_1:74120439-74120458 | Msa0571490:intron | 30.0% | |
| TATGTTATGTGACTTTCTCA+AGG | + | chr4_1:74120581-74120600 | None:intergenic | 30.0% | |
| AGTCACATAACATATTCGAA+AGG | - | chr4_1:74120587-74120606 | Msa0571490:intron | 30.0% | |
| TTCATAGAACATGCAAAGAA+GGG | + | chr4_1:74120671-74120690 | None:intergenic | 30.0% | |
| TAGAAGAAAGAGAAATGCTA+AGG | - | chr4_1:74120806-74120825 | Msa0571490:intron | 30.0% | |
| AAGAGAAATGCTAAGGAATA+AGG | - | chr4_1:74120813-74120832 | Msa0571490:intron | 30.0% | |
| !! | AGAAATGGATTTTGCATGAA+GGG | + | chr4_1:74120949-74120968 | None:intergenic | 30.0% |
| !! | TAGAAATGGATTTTGCATGA+AGG | + | chr4_1:74120950-74120969 | None:intergenic | 30.0% |
| AAGATTTAATTGCAGAAAGC+TGG | + | chr4_1:74120993-74121012 | None:intergenic | 30.0% | |
| AGCTTTCTGTACTAGAAAAA+GGG | - | chr4_1:74121067-74121086 | Msa0571490:intron | 30.0% | |
| GGATAAACACTTGATCAAAA+TGG | - | chr4_1:74121097-74121116 | Msa0571490:intron | 30.0% | |
| ! | AGCTAACTTAAGTTTTCAGA+CGG | + | chr4_1:74121131-74121150 | None:intergenic | 30.0% |
| ! | AATATGATTTGAAACCTGGA+TGG | - | chr4_1:74121224-74121243 | Msa0571490:intron | 30.0% |
| TTTAACTGAGCCATGAAATA+GGG | + | chr4_1:74122060-74122079 | None:intergenic | 30.0% | |
| ATTTAACTGAGCCATGAAAT+AGG | + | chr4_1:74122061-74122080 | None:intergenic | 30.0% | |
| ATAATCACTAGAAGTTAGCT+TGG | + | chr4_1:74122223-74122242 | None:intergenic | 30.0% | |
| ! | AACTCTTCACAATTTTGCAT+TGG | + | chr4_1:74122403-74122422 | None:intergenic | 30.0% |
| ! | CTTATAACGTTGAGATTTTG+TGG | - | chr4_1:74122477-74122496 | Msa0571490:CDS | 30.0% |
| !! | TGAGATTTTGTGGTTGATTT+AGG | - | chr4_1:74122487-74122506 | Msa0571490:CDS | 30.0% |
| !! | GAGATTTTGTGGTTGATTTA+GGG | - | chr4_1:74122488-74122507 | Msa0571490:CDS | 30.0% |
| ATGTTAAGTTTGAAAGTCCA+TGG | + | chr4_1:74122578-74122597 | None:intergenic | 30.0% | |
| ATTCTACCACAAGTTTATGA+AGG | + | chr4_1:74122608-74122627 | None:intergenic | 30.0% | |
| !! | GAAGTTTTATCTGTTTCCTT+TGG | - | chr4_1:74122665-74122684 | Msa0571490:CDS | 30.0% |
| TTTGACGAATTGCTATACTA+AGG | - | chr4_1:74122785-74122804 | Msa0571490:five_prime_UTR | 30.0% | |
| TTGCTATACTAAGGTGTATT+CGG | - | chr4_1:74122794-74122813 | Msa0571490:five_prime_UTR | 30.0% | |
| ! | CTTTTCTTTCACATTTCTGT+GGG | - | chr4_1:74122824-74122843 | Msa0571490:five_prime_UTR | 30.0% |
| !!! | ATTGTATAAGCCACCTTTTT+TGG | - | chr4_1:74122853-74122872 | Msa0571490:five_prime_UTR | 30.0% |
| !!! | TTGTATAAGCCACCTTTTTT+GGG | - | chr4_1:74122854-74122873 | Msa0571490:five_prime_UTR | 30.0% |
| AAAGTTCGTTCAAACAACTT+TGG | + | chr4_1:74123053-74123072 | None:intergenic | 30.0% | |
| ! | TAGAGTGTCCTTACTGTAAA+GGG | - | chr4_1:74115705-74115724 | Msa0571490:three_prime_UTR | 35.0% |
| CTGTAAAGGGAAAAGTTACA+AGG | - | chr4_1:74115718-74115737 | Msa0571490:three_prime_UTR | 35.0% | |
| AAAGGGAAAAGTTACAAGGA+TGG | - | chr4_1:74115722-74115741 | Msa0571490:three_prime_UTR | 35.0% | |
| TCGAAGAAAGAACTGAGTAA+CGG | - | chr4_1:74115893-74115912 | Msa0571490:three_prime_UTR | 35.0% | |
| ! | AGTCTATTCAGAGAGTATGA+AGG | - | chr4_1:74115937-74115956 | Msa0571490:three_prime_UTR | 35.0% |
| AGTATGAAGGAGTGAATCAA+AGG | - | chr4_1:74115950-74115969 | Msa0571490:three_prime_UTR | 35.0% | |
| AGAAAAGAAGAAAGGGGAAA+TGG | + | chr4_1:74115986-74116005 | None:intergenic | 35.0% | |
| TGCGTGAAGAAAAGAAGAAA+GGG | + | chr4_1:74115993-74116012 | None:intergenic | 35.0% | |
| TTGCGTGAAGAAAAGAAGAA+AGG | + | chr4_1:74115994-74116013 | None:intergenic | 35.0% | |
| CACCACATAACTTCCATATT+CGG | - | chr4_1:74116150-74116169 | Msa0571490:intron | 35.0% | |
| TTCCGAATATGGAAGTTATG+TGG | + | chr4_1:74116155-74116174 | None:intergenic | 35.0% | |
| !! | AGAGAAAGTGTTAGAAATGG+TGG | + | chr4_1:74116183-74116202 | None:intergenic | 35.0% |
| ATAATCGATGAGATCCTGTT+TGG | + | chr4_1:74116324-74116343 | None:intergenic | 35.0% | |
| GTAAAACCAAGGATAAATGG+AGG | - | chr4_1:74116357-74116376 | Msa0571490:intron | 35.0% | |
| ! | GTTCTCTTTTCATGAATTGC+TGG | - | chr4_1:74116501-74116520 | Msa0571490:intron | 35.0% |
| GTGACAGATACAAGAAATCA+AGG | + | chr4_1:74116597-74116616 | None:intergenic | 35.0% | |
| ACATGAGTTTCATGTCAACA+TGG | - | chr4_1:74116940-74116959 | Msa0571490:intron | 35.0% | |
| ! | TCGTATATTTAGCTCAGCTA+GGG | + | chr4_1:74117192-74117211 | None:intergenic | 35.0% |
| !! | AATGTACTCCTTTGAAGTGA+TGG | - | chr4_1:74117519-74117538 | Msa0571490:intron | 35.0% |
| GATGGATAAAAGTGGTTAGA+TGG | - | chr4_1:74117537-74117556 | Msa0571490:intron | 35.0% | |
| TTAGATGGAACATCTTCCTA+GGG | - | chr4_1:74117552-74117571 | Msa0571490:intron | 35.0% | |
| TTCATGTTCTCTTGCAGAAT+AGG | - | chr4_1:74117726-74117745 | Msa0571490:intron | 35.0% | |
| ! | GGTACTGAACATGAAAAGTT+TGG | - | chr4_1:74117747-74117766 | Msa0571490:intron | 35.0% |
| !!! | GAAAAGTTTGGTTTTGAGCT+TGG | - | chr4_1:74117759-74117778 | Msa0571490:intron | 35.0% |
| ! | GGAAATGGGAATTGGATTTT+TGG | - | chr4_1:74118452-74118471 | Msa0571490:CDS | 35.0% |
| AAAACTACCTTTGGCATCAT+AGG | + | chr4_1:74118516-74118535 | None:intergenic | 35.0% | |
| GGAGAAAGAAAAACTACCTT+TGG | + | chr4_1:74118525-74118544 | None:intergenic | 35.0% | |
| AGATATGCTCAATCAGTTCA+AGG | + | chr4_1:74118560-74118579 | None:intergenic | 35.0% | |
| ACAATAATCTCAAGTCACTG+TGG | + | chr4_1:74118764-74118783 | None:intergenic | 35.0% | |
| TTAGTAACATTTGAGCTCCA+TGG | - | chr4_1:74118803-74118822 | Msa0571490:intron | 35.0% | |
| TAGTAACATTTGAGCTCCAT+GGG | - | chr4_1:74118804-74118823 | Msa0571490:intron | 35.0% | |
| !!! | ACTATCCGTCTTTTTTGTTG+TGG | - | chr4_1:74118922-74118941 | Msa0571490:intron | 35.0% |
| CGTGTTTATACAGGTAAATC+TGG | - | chr4_1:74119134-74119153 | Msa0571490:intron | 35.0% | |
| CTCATACTAACAAACCCATT+GGG | + | chr4_1:74119348-74119367 | None:intergenic | 35.0% | |
| TCTCATACTAACAAACCCAT+TGG | + | chr4_1:74119349-74119368 | None:intergenic | 35.0% | |
| !! | ATGGGTTTGTTAGTATGAGA+AGG | - | chr4_1:74119349-74119368 | Msa0571490:intron | 35.0% |
| ! | TGTTAGTATGAGAAGGTACA+TGG | - | chr4_1:74119356-74119375 | Msa0571490:intron | 35.0% |
| AGGTTTATGAAAATGGGACA+AGG | + | chr4_1:74119443-74119462 | None:intergenic | 35.0% | |
| AAACCTGAAACAGCCATATT+TGG | - | chr4_1:74119457-74119476 | Msa0571490:CDS | 35.0% | |
| TATCGGTATCAGTCCAAATA+TGG | + | chr4_1:74119473-74119492 | None:intergenic | 35.0% | |
| TATTTGGACTGATACCGATA+AGG | - | chr4_1:74119473-74119492 | Msa0571490:CDS | 35.0% | |
| !!! | TTGTTTTTGATGACTCCTTC+GGG | - | chr4_1:74119517-74119536 | Msa0571490:intron | 35.0% |
| ! | CTTCTAATTTTAGGCTTCGT+GGG | - | chr4_1:74119596-74119615 | Msa0571490:CDS | 35.0% |
| TGGTGTTTCATGCAATGATT+TGG | - | chr4_1:74119944-74119963 | Msa0571490:intron | 35.0% | |
| AATTACCGACCCTTAATGAT+TGG | - | chr4_1:74120299-74120318 | Msa0571490:CDS | 35.0% | |
| ATTACCGACCCTTAATGATT+GGG | - | chr4_1:74120300-74120319 | Msa0571490:CDS | 35.0% | |
| AACATTACTCTTTCCAGGTT+AGG | - | chr4_1:74120444-74120463 | Msa0571490:intron | 35.0% | |
| ! | TATGTGCTTTACCAGCATTT+TGG | - | chr4_1:74120519-74120538 | Msa0571490:intron | 35.0% |
| ! | ATGTGCTTTACCAGCATTTT+GGG | - | chr4_1:74120520-74120539 | Msa0571490:intron | 35.0% |
| GTTCATAGAACATGCAAAGA+AGG | + | chr4_1:74120672-74120691 | None:intergenic | 35.0% | |
| ! | TTTTGGATATGACAGCAGAT+TGG | - | chr4_1:74120779-74120798 | Msa0571490:intron | 35.0% |
| !! | GAAATGGATTTTGCATGAAG+GGG | + | chr4_1:74120948-74120967 | None:intergenic | 35.0% |
| ATCCATTTCTACTTGAAGCA+TGG | - | chr4_1:74120959-74120978 | Msa0571490:CDS | 35.0% | |
| TCCATTTCTACTTGAAGCAT+GGG | - | chr4_1:74120960-74120979 | Msa0571490:CDS | 35.0% | |
| !! | AAATGGATTTTGCATGAAGG+GGG | + | chr4_1:74120947-74120966 | None:intergenic | 35.0% |
| !! | CAAATGGATTTTGCATGAAG+GGG | + | chr4_1:74121023-74121042 | None:intergenic | 35.0% |
| !! | CCAAATGGATTTTGCATGAA+GGG | + | chr4_1:74121024-74121043 | None:intergenic | 35.0% |
| CCTTCATGCAAAATCCATTT+GGG | - | chr4_1:74120947-74120966 | Msa0571490:CDS | 35.0% | |
| !! | CTTTTTCTAGTACAGAAAGC+TGG | + | chr4_1:74121068-74121087 | None:intergenic | 35.0% |
| CAGCTTTCTGTACTAGAAAA+AGG | - | chr4_1:74121066-74121085 | Msa0571490:intron | 35.0% | |
| TACTAGAAAAAGGGTAACTG+AGG | - | chr4_1:74121076-74121095 | Msa0571490:intron | 35.0% | |
| !! | ATGGATTGGTATGTATCTAC+AGG | - | chr4_1:74121897-74121916 | Msa0571490:intron | 35.0% |
| ATTGGTATGTATCTACAGGA+TGG | - | chr4_1:74121901-74121920 | Msa0571490:intron | 35.0% | |
| GGAATCAGGATTTCTAAATG+CGG | - | chr4_1:74121945-74121964 | Msa0571490:intron | 35.0% | |
| ACAGCCTCTAACTAAAACAA+GGG | + | chr4_1:74122113-74122132 | None:intergenic | 35.0% | |
| AACAGCCTCTAACTAAAACA+AGG | + | chr4_1:74122114-74122133 | None:intergenic | 35.0% | |
| ! | ATATCTCTATAATGGGGTAC+CGG | - | chr4_1:74122283-74122302 | Msa0571490:intron | 35.0% |
| !! | TATTTGAGAGTTGGTATCCA+TGG | - | chr4_1:74122558-74122577 | Msa0571490:CDS | 35.0% |
| !!! | AGGCTTTTGGAATTGTATCA+TGG | - | chr4_1:74122734-74122753 | Msa0571490:five_prime_UTR | 35.0% |
| TGGAATTGTATCATGGAAAG+TGG | - | chr4_1:74122741-74122760 | Msa0571490:five_prime_UTR | 35.0% | |
| GGAATTGTATCATGGAAAGT+GGG | - | chr4_1:74122742-74122761 | Msa0571490:five_prime_UTR | 35.0% | |
| ! | GCTTTTCTTTCACATTTCTG+TGG | - | chr4_1:74122823-74122842 | Msa0571490:five_prime_UTR | 35.0% |
| TAGAATCGTGTGTAAAACTC+TGG | - | chr4_1:74122877-74122896 | Msa0571490:five_prime_UTR | 35.0% | |
| ! | CATTTTCTCTAATTCCAGAC+TGG | - | chr4_1:74123073-74123092 | Msa0571490:five_prime_UTR | 35.0% |
| GGAAAAGTTACAAGGATGGA+TGG | - | chr4_1:74115726-74115745 | Msa0571490:three_prime_UTR | 40.0% | |
| AAGTTACAAGGATGGATGGA+TGG | - | chr4_1:74115730-74115749 | Msa0571490:three_prime_UTR | 40.0% | |
| ! | TAGCTACAAGAAGCATAGGT+AGG | - | chr4_1:74115863-74115882 | Msa0571490:three_prime_UTR | 40.0% |
| GCGTGAAGAAAAGAAGAAAG+GGG | + | chr4_1:74115992-74116011 | None:intergenic | 40.0% | |
| !! | GAAAGTGTTAGAAATGGTGG+AGG | + | chr4_1:74116180-74116199 | None:intergenic | 40.0% |
| AAGAGAATCGTTACTTCCAG+TGG | - | chr4_1:74116230-74116249 | Msa0571490:intron | 40.0% | |
| TACTGAACCTCTTACCAAAC+AGG | - | chr4_1:74116307-74116326 | Msa0571490:intron | 40.0% | |
| ATGAGATCCTGTTTGGTAAG+AGG | + | chr4_1:74116317-74116336 | None:intergenic | 40.0% | |
| TCGTATATGTAGCTCAGCTA+GGG | + | chr4_1:74116815-74116834 | None:intergenic | 40.0% | |
| TTATAGCGTATGTGTGCTTC+TGG | - | chr4_1:74116891-74116910 | Msa0571490:intron | 40.0% | |
| TCAAATATGTAGCTCAGCTC+AGG | - | chr4_1:74117123-74117142 | Msa0571490:intron | 40.0% | |
| ! | GTCGTATATTTAGCTCAGCT+AGG | + | chr4_1:74117193-74117212 | None:intergenic | 40.0% |
| GTCGCATTTATCAATGGTGA+TGG | - | chr4_1:74117438-74117457 | Msa0571490:intron | 40.0% | |
| GTTAGATGGAACATCTTCCT+AGG | - | chr4_1:74117551-74117570 | Msa0571490:intron | 40.0% | |
| AAAAGTGAACGCAAAACCCT+AGG | + | chr4_1:74117571-74117590 | None:intergenic | 40.0% | |
| !! | TTTTGCGTTCACTTTTCACG+AGG | - | chr4_1:74117575-74117594 | Msa0571490:intron | 40.0% |
| CATTGCTGAGAGATTTGACT+GGG | - | chr4_1:74117830-74117849 | Msa0571490:intron | 40.0% | |
| ! | GACTGGGATAAAGTAATGGA+AGG | - | chr4_1:74117846-74117865 | Msa0571490:intron | 40.0% |
| CTTTGTGACTCAGCATTCAT+TGG | - | chr4_1:74117965-74117984 | Msa0571490:intron | 40.0% | |
| TTGGATTGCCATGCTATTGT+TGG | - | chr4_1:74117984-74118003 | Msa0571490:CDS | 40.0% | |
| TTGACTCTCCAACAATAGCA+TGG | + | chr4_1:74117995-74118014 | None:intergenic | 40.0% | |
| TCTGATGCAGAGTTTCAAGA+GGG | + | chr4_1:74118105-74118124 | None:intergenic | 40.0% | |
| ATAGGTTAAAGCTGTTGCTG+AGG | - | chr4_1:74118431-74118450 | Msa0571490:intron | 40.0% | |
| TAAAGCTGTTGCTGAGGAAA+TGG | - | chr4_1:74118437-74118456 | Msa0571490:intron | 40.0% | |
| AAAGCTGTTGCTGAGGAAAT+GGG | - | chr4_1:74118438-74118457 | Msa0571490:intron | 40.0% | |
| !! | GGAATTGGATTTTTGGGGAT+TGG | - | chr4_1:74118459-74118478 | Msa0571490:CDS | 40.0% |
| AGACATACCTATGATGCCAA+AGG | - | chr4_1:74118506-74118525 | Msa0571490:CDS | 40.0% | |
| ACTGATTGAGCATATCTGCA+TGG | - | chr4_1:74118563-74118582 | Msa0571490:intron | 40.0% | |
| GGATAAAAGCCCTCTGTTTA+TGG | - | chr4_1:74118623-74118642 | Msa0571490:intron | 40.0% | |
| ACCAATGGACCATAAACAGA+GGG | + | chr4_1:74118635-74118654 | None:intergenic | 40.0% | |
| AATTCCACATGTCATTCCCA+TGG | + | chr4_1:74118823-74118842 | None:intergenic | 40.0% | |
| TGGGAATGACATGTGGAATT+CGG | - | chr4_1:74118823-74118842 | Msa0571490:intron | 40.0% | |
| CTGAGCCACAACAAAAAAGA+CGG | + | chr4_1:74118930-74118949 | None:intergenic | 40.0% | |
| !!! | GTCTTTTTTGTTGTGGCTCA+GGG | - | chr4_1:74118929-74118948 | Msa0571490:intron | 40.0% |
| ! | ATGCCTAAAGTTGGTTCTCT+TGG | - | chr4_1:74118977-74118996 | Msa0571490:intron | 40.0% |
| ! | TGCCTAAAGTTGGTTCTCTT+GGG | - | chr4_1:74118978-74118997 | Msa0571490:intron | 40.0% |
| ATCAGCTCTCGTGTTTATAC+AGG | - | chr4_1:74119125-74119144 | Msa0571490:intron | 40.0% | |
| ATGATCAGGAAATTTCGTGC+TGG | - | chr4_1:74119177-74119196 | Msa0571490:intron | 40.0% | |
| ! | AGTCCAAATATGGCTGTTTC+AGG | + | chr4_1:74119463-74119482 | None:intergenic | 40.0% |
| CCACGAAGCCTAAAATTAGA+AGG | + | chr4_1:74119598-74119617 | None:intergenic | 40.0% | |
| ! | CCTTCTAATTTTAGGCTTCG+TGG | - | chr4_1:74119595-74119614 | Msa0571490:CDS | 40.0% |
| GGTAATTCACCAGGAATACA+AGG | + | chr4_1:74120286-74120305 | None:intergenic | 40.0% | |
| TTCTCCCAATCATTAAGGGT+CGG | + | chr4_1:74120307-74120326 | None:intergenic | 40.0% | |
| TTTGACCACTATATTTCCCG+AGG | - | chr4_1:74120330-74120349 | Msa0571490:CDS | 40.0% | |
| ACAAACCTCGGGAAATATAG+TGG | + | chr4_1:74120338-74120357 | None:intergenic | 40.0% | |
| AATACCTCTTTAGCCTAACC+TGG | + | chr4_1:74120460-74120479 | None:intergenic | 40.0% | |
| !! | GGTTAGGCTAAAGAGGTATT+TGG | - | chr4_1:74120460-74120479 | Msa0571490:intron | 40.0% |
| !! | AAGAGGTATTTGGAGATGAG+AGG | - | chr4_1:74120470-74120489 | Msa0571490:intron | 40.0% |
| AAAGCACATAACCTTCTCCA+AGG | + | chr4_1:74120509-74120528 | None:intergenic | 40.0% | |
| ATAATGTTCCTGATTGTGCC+AGG | - | chr4_1:74120720-74120739 | Msa0571490:CDS | 40.0% | |
| ! | GGTTTCTTTGCAACGTGTTT+TGG | - | chr4_1:74120762-74120781 | Msa0571490:intron | 40.0% |
| CCTAGCTTACTTATGCTTCT+GGG | + | chr4_1:74120880-74120899 | None:intergenic | 40.0% | |
| ACCTAGCTTACTTATGCTTC+TGG | + | chr4_1:74120881-74120900 | None:intergenic | 40.0% | |
| CCCTTCATGCAAAATCCATT+TGG | - | chr4_1:74120946-74120965 | Msa0571490:CDS | 40.0% | |
| !! | CCCAAATGGATTTTGCATGA+AGG | + | chr4_1:74121025-74121044 | None:intergenic | 40.0% |
| TTAGGGTCTTGAGTTTCAGA+CGG | - | chr4_1:74121198-74121217 | Msa0571490:intron | 40.0% | |
| GGAGAGATATGTTCCTTCTT+TGG | - | chr4_1:74121245-74121264 | Msa0571490:intron | 40.0% | |
| AGAGAGAGAGAATCCAAAGA+AGG | + | chr4_1:74121261-74121280 | None:intergenic | 40.0% | |
| TACGTACGTACGTACATACT+CGG | - | chr4_1:74121317-74121336 | Msa0571490:intron | 40.0% | |
| TCGAAATGGTGTCTTTAGAC+CGG | + | chr4_1:74121777-74121796 | None:intergenic | 40.0% | |
| CTAAAGACACCATTTCGAGA+TGG | - | chr4_1:74121779-74121798 | Msa0571490:intron | 40.0% | |
| TTCAGCAAACCATCTCGAAA+TGG | + | chr4_1:74121791-74121810 | None:intergenic | 40.0% | |
| CATGCTCTTAGCAACATTGA+TGG | + | chr4_1:74121880-74121899 | None:intergenic | 40.0% | |
| CATCAATGTTGCTAAGAGCA+TGG | - | chr4_1:74121878-74121897 | Msa0571490:intron | 40.0% | |
| ! | ATGTTGCTAAGAGCATGGAT+TGG | - | chr4_1:74121883-74121902 | Msa0571490:intron | 40.0% |
| TATGTATCTACAGGATGGCT+TGG | - | chr4_1:74121906-74121925 | Msa0571490:intron | 40.0% | |
| CTTGGAAAGAAGAGGCTTTA+AGG | - | chr4_1:74121924-74121943 | Msa0571490:intron | 40.0% | |
| !! | AGAAGAGGCTTTAAGGAATC+AGG | - | chr4_1:74121931-74121950 | Msa0571490:intron | 40.0% |
| ATTTCTAAATGCGGTAGCTG+AGG | - | chr4_1:74121954-74121973 | Msa0571490:intron | 40.0% | |
| CTGAAGCATGGCACAAAAAA+TGG | + | chr4_1:74122033-74122052 | None:intergenic | 40.0% | |
| ! | TTTTTGTGCCATGCTTCAGA+TGG | - | chr4_1:74122034-74122053 | Msa0571490:intron | 40.0% |
| !!! | TTGGCCCTTGTTTTAGTTAG+AGG | - | chr4_1:74122106-74122125 | Msa0571490:intron | 40.0% |
| CTTGCACCTTCATAAACTTG+TGG | - | chr4_1:74122599-74122618 | Msa0571490:CDS | 40.0% | |
| TTCTTTCACATTTCTGTGGG+AGG | - | chr4_1:74122827-74122846 | Msa0571490:five_prime_UTR | 40.0% | |
| ACGATTCTACCCAAAAAAGG+TGG | + | chr4_1:74122866-74122885 | None:intergenic | 40.0% | |
| CACACGATTCTACCCAAAAA+AGG | + | chr4_1:74122869-74122888 | None:intergenic | 40.0% | |
| AAACTCTGGCTATATAGTCC+TGG | - | chr4_1:74122891-74122910 | Msa0571490:five_prime_UTR | 40.0% | |
| ! | GAACTGAGTAACGGAACAAG+CGG | - | chr4_1:74115902-74115921 | Msa0571490:three_prime_UTR | 45.0% |
| ! | TGGTGGAGGTTTTCCGAATA+TGG | + | chr4_1:74116166-74116185 | None:intergenic | 45.0% |
| AGAATCGTTACTTCCAGTGG+TGG | - | chr4_1:74116233-74116252 | Msa0571490:intron | 45.0% | |
| AATGAATCTACGACCACCAC+TGG | + | chr4_1:74116249-74116268 | None:intergenic | 45.0% | |
| ACAACAGCATCTTCAGTAGG+AGG | + | chr4_1:74116284-74116303 | None:intergenic | 45.0% | |
| GCAACAACAGCATCTTCAGT+AGG | + | chr4_1:74116287-74116306 | None:intergenic | 45.0% | |
| ! | CTCATCGATTATCTCGCTTC+TGG | - | chr4_1:74116332-74116351 | Msa0571490:intron | 45.0% |
| ! | CGCTTCTGGTTGTAAAACCA+AGG | - | chr4_1:74116346-74116365 | Msa0571490:intron | 45.0% |
| GTCGTATATGTAGCTCAGCT+AGG | + | chr4_1:74116816-74116835 | None:intergenic | 45.0% | |
| TCGAATATGCAGCGCAACTT+AGG | - | chr4_1:74116858-74116877 | Msa0571490:CDS | 45.0% | |
| GCATTGCTGAGAGATTTGAC+TGG | - | chr4_1:74117829-74117848 | Msa0571490:intron | 45.0% | |
| TTGCGCACATTGTGTGAAAC+AGG | - | chr4_1:74118027-74118046 | Msa0571490:CDS | 45.0% | |
| TGCGCACATTGTGTGAAACA+GGG | - | chr4_1:74118028-74118047 | Msa0571490:CDS | 45.0% | |
| CAGAGCATATCATTAGAGCC+AGG | - | chr4_1:74118055-74118074 | Msa0571490:intron | 45.0% | |
| AGCATATCATTAGAGCCAGG+TGG | - | chr4_1:74118058-74118077 | Msa0571490:intron | 45.0% | |
| CTAAGTTCAAACTGACCACC+TGG | + | chr4_1:74118076-74118095 | None:intergenic | 45.0% | |
| GGTGGTCAGTTTGAACTTAG+TGG | - | chr4_1:74118076-74118095 | Msa0571490:intron | 45.0% | |
| CTGATGCAGAGTTTCAAGAG+GGG | + | chr4_1:74118104-74118123 | None:intergenic | 45.0% | |
| GTCTGATGCAGAGTTTCAAG+AGG | + | chr4_1:74118106-74118125 | None:intergenic | 45.0% | |
| GTTGCTGAGGAAATGGGAAT+TGG | - | chr4_1:74118444-74118463 | Msa0571490:intron | 45.0% | |
| !! | GATTGGTTTCCAGCCAAAGT+GGG | - | chr4_1:74118476-74118495 | Msa0571490:CDS | 45.0% |
| ATGTCTTTGCGTTCCCACTT+TGG | + | chr4_1:74118492-74118511 | None:intergenic | 45.0% | |
| GACCAATGGACCATAAACAG+AGG | + | chr4_1:74118636-74118655 | None:intergenic | 45.0% | |
| ! | TGGTCCATTGGTCGTGATTT+TGG | - | chr4_1:74118643-74118662 | Msa0571490:intron | 45.0% |
| CAAGCCAAAATCACGACCAA+TGG | + | chr4_1:74118650-74118669 | None:intergenic | 45.0% | |
| TGGCTTGATTTCCTGACATC+AGG | - | chr4_1:74118663-74118682 | Msa0571490:intron | 45.0% | |
| !!! | CGTCTTTTTTGTTGTGGCTC+AGG | - | chr4_1:74118928-74118947 | Msa0571490:intron | 45.0% |
| AGCCCAAGAGAACCAACTTT+AGG | + | chr4_1:74118983-74119002 | None:intergenic | 45.0% | |
| TTGGGCTTGACATGATGTTC+AGG | - | chr4_1:74118996-74119015 | Msa0571490:intron | 45.0% | |
| ! | CAGGTGACTCGTGTGATTTT+TGG | - | chr4_1:74119031-74119050 | Msa0571490:intron | 45.0% |
| !! | GTTCTGAAGCTGACATGATC+AGG | - | chr4_1:74119163-74119182 | Msa0571490:intron | 45.0% |
| TTCTTACAGGCTGCAAAGCT+AGG | + | chr4_1:74119203-74119222 | None:intergenic | 45.0% | |
| GCTGTTGCTATCTGTTGTGA+AGG | + | chr4_1:74119291-74119310 | None:intergenic | 45.0% | |
| GCAAATTCACCCTTCACAGA+TGG | - | chr4_1:74119318-74119337 | Msa0571490:intron | 45.0% | |
| TTGGGCTTTCCATCTGTGAA+GGG | + | chr4_1:74119330-74119349 | None:intergenic | 45.0% | |
| ATTGGGCTTTCCATCTGTGA+AGG | + | chr4_1:74119331-74119350 | None:intergenic | 45.0% | |
| TTCACAGATGGAAAGCCCAA+TGG | - | chr4_1:74119330-74119349 | Msa0571490:intron | 45.0% | |
| TCACAGATGGAAAGCCCAAT+GGG | - | chr4_1:74119331-74119350 | Msa0571490:intron | 45.0% | |
| GGATCGCTTGATCAGCAAAA+GGG | + | chr4_1:74119640-74119659 | None:intergenic | 45.0% | |
| AGGATCGCTTGATCAGCAAA+AGG | + | chr4_1:74119641-74119660 | None:intergenic | 45.0% | |
| ! | GTTTTCGAACTCTCTGATGC+AGG | - | chr4_1:74119989-74120008 | Msa0571490:intron | 45.0% |
| ACTGTACTGGAATGACCTTC+AGG | - | chr4_1:74120082-74120101 | Msa0571490:intron | 45.0% | |
| CTGTACTGGAATGACCTTCA+GGG | - | chr4_1:74120083-74120102 | Msa0571490:intron | 45.0% | |
| AGGATAGATGAGAACCCTGA+AGG | + | chr4_1:74120100-74120119 | None:intergenic | 45.0% | |
| CTACATGAACACTGTGGTCT+AGG | + | chr4_1:74120193-74120212 | None:intergenic | 45.0% | |
| GCAAAGCTACATGAACACTG+TGG | + | chr4_1:74120199-74120218 | None:intergenic | 45.0% | |
| TTACTGTAGGACTTCTTGGC+AGG | - | chr4_1:74120253-74120272 | Msa0571490:intron | 45.0% | |
| GGAAAGCTTCCTTGTATTCC+TGG | - | chr4_1:74120274-74120293 | Msa0571490:intron | 45.0% | |
| TTAAGGGTCGGTAATTCACC+AGG | + | chr4_1:74120295-74120314 | None:intergenic | 45.0% | |
| CTTTCCAGGTTAGGCTAAAG+AGG | - | chr4_1:74120453-74120472 | Msa0571490:intron | 45.0% | |
| CACAAACTCACCCAAAATGC+TGG | + | chr4_1:74120533-74120552 | None:intergenic | 45.0% | |
| CATCGTACAATATCCCTACC+TGG | + | chr4_1:74120741-74120760 | None:intergenic | 45.0% | |
| GGTAGGGATATTGTACGATG+AGG | - | chr4_1:74120741-74120760 | Msa0571490:intron | 45.0% | |
| ! | CCCAGAAGCATAAGTAAGCT+AGG | - | chr4_1:74120877-74120896 | Msa0571490:intron | 45.0% |
| GCCCATGCTTCAAGTAGAAA+TGG | + | chr4_1:74120964-74120983 | None:intergenic | 45.0% | |
| ATCCATTTGGGCTTGAAGCA+TGG | - | chr4_1:74121034-74121053 | Msa0571490:CDS | 45.0% | |
| TCCATTTGGGCTTGAAGCAT+GGG | - | chr4_1:74121035-74121054 | Msa0571490:CDS | 45.0% | |
| AGGAACATATCTCTCCATCC+AGG | + | chr4_1:74121241-74121260 | None:intergenic | 45.0% | |
| TGGTGTCTTTAGACCGGTTA+CGG | + | chr4_1:74121771-74121790 | None:intergenic | 45.0% | |
| ! | AAATAGGGCCATCTGAAGCA+TGG | + | chr4_1:74122045-74122064 | None:intergenic | 45.0% |
| CTTCAGATGGCCCTATTTCA+TGG | - | chr4_1:74122047-74122066 | Msa0571490:intron | 45.0% | |
| ATGAGAGAGCAGCAGAACAT+TGG | + | chr4_1:74122150-74122169 | None:intergenic | 45.0% | |
| AATTCCAAAAGCCTCTCAGC+TGG | + | chr4_1:74122728-74122747 | None:intergenic | 45.0% | |
| ATCTCACAAGAGAGATAGCC+AGG | + | chr4_1:74122912-74122931 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTAAAAAAAAACA+AGG | + | chr4_1:74121546-74121565 | None:intergenic | 5.0% |
| !!! | TTTTTTAAAAAAAAAAGTTT+TGG | - | chr4_1:74121551-74121570 | Msa0571490:intron | 5.0% |
| !!! | TTTTTAAAAAAAAAAGTTTT+GGG | - | chr4_1:74121552-74121571 | Msa0571490:intron | 5.0% |
| !! | AGTTATGTGGTGTTGCGTCG+TGG | + | chr4_1:74116142-74116161 | None:intergenic | 50.0% |
| CACGCACCTCCATTTATCCT+TGG | + | chr4_1:74116366-74116385 | None:intergenic | 50.0% | |
| !!! | TGCTGTTTTGTCGTCACCTC+AGG | - | chr4_1:74116741-74116760 | Msa0571490:intron | 50.0% |
| ! | TTTTGTCGTCACCTCAGGTC+AGG | - | chr4_1:74116746-74116765 | Msa0571490:intron | 50.0% |
| CTCAGCTAGGGTAATCACTC+AGG | + | chr4_1:74117180-74117199 | None:intergenic | 50.0% | |
| GCGCACATTGTGTGAAACAG+GGG | - | chr4_1:74118029-74118048 | Msa0571490:CDS | 50.0% | |
| !! | GGATTGGTTTCCAGCCAAAG+TGG | - | chr4_1:74118475-74118494 | Msa0571490:CDS | 50.0% |
| GCCCTCTGTTTATGGTCCAT+TGG | - | chr4_1:74118631-74118650 | Msa0571490:intron | 50.0% | |
| AGCTCCATGGGAATGACATG+TGG | - | chr4_1:74118816-74118835 | Msa0571490:intron | 50.0% | |
| GTTCAGGACATGCACTGTAC+AGG | - | chr4_1:74119012-74119031 | Msa0571490:intron | 50.0% | |
| !! | TTGGAGATGAGAGGTGCTGA+TGG | - | chr4_1:74120479-74120498 | Msa0571490:intron | 50.0% |
| !! | AGATGAGAGGTGCTGATGGA+GGG | - | chr4_1:74120483-74120502 | Msa0571490:intron | 50.0% |
| TGTTCCTGATTGTGCCAGGT+AGG | - | chr4_1:74120724-74120743 | Msa0571490:CDS | 50.0% | |
| GTTCCTGATTGTGCCAGGTA+GGG | - | chr4_1:74120725-74120744 | Msa0571490:CDS | 50.0% | |
| TATCCCTACCTGGCACAATC+AGG | + | chr4_1:74120731-74120750 | None:intergenic | 50.0% | |
| ACTGATAACCGGAGTCTCTC+TGG | - | chr4_1:74121738-74121757 | Msa0571490:intron | 50.0% | |
| GCTGAAGCATGTTGCTGAAG+AGG | - | chr4_1:74121805-74121824 | Msa0571490:intron | 50.0% | |
| !! | TGCTGAAGAGGTTCTAGAGC+TGG | - | chr4_1:74121817-74121836 | Msa0571490:intron | 50.0% |
| !! | AGAGGTTCTAGAGCTGGCAA+AGG | - | chr4_1:74121823-74121842 | Msa0571490:intron | 50.0% |
| ! | CAGGATGGCTTGGAAAGAAG+AGG | - | chr4_1:74121916-74121935 | Msa0571490:intron | 50.0% |
| TCTAAATGCGGTAGCTGAGG+TGG | - | chr4_1:74121957-74121976 | Msa0571490:intron | 50.0% | |
| GTAGCTGAGGTGGTTAGAAC+AGG | - | chr4_1:74121967-74121986 | Msa0571490:intron | 50.0% | |
| !! | TATGTGGTGTTGCGTCGTGG+CGG | + | chr4_1:74116139-74116158 | None:intergenic | 55.0% |
| CTTTGCGTTCCCACTTTGGC+TGG | + | chr4_1:74118488-74118507 | None:intergenic | 55.0% | |
| GATACCGATAAGGACCGCAC+AGG | - | chr4_1:74119483-74119502 | Msa0571490:CDS | 55.0% | |
| CATGCCTGTGCGGTCCTTAT+CGG | + | chr4_1:74119490-74119509 | None:intergenic | 55.0% | |
| CAAAAGGCAGCATGCCTGTG+CGG | + | chr4_1:74119500-74119519 | None:intergenic | 55.0% | |
| !! | GAGATGAGAGGTGCTGATGG+AGG | - | chr4_1:74120482-74120501 | Msa0571490:intron | 55.0% |
| GCCCATGCTTCAAGCCCAAA+TGG | + | chr4_1:74121039-74121058 | None:intergenic | 55.0% | |
| ATAACCGGAGTCTCTCTGGC+AGG | - | chr4_1:74121742-74121761 | Msa0571490:intron | 55.0% | |
| ! | CACTCCAGCTGAGAGGCTTT+TGG | - | chr4_1:74122721-74122740 | Msa0571490:five_prime_UTR | 55.0% |
| GCGACGCATTACCTGACCTG+AGG | + | chr4_1:74116760-74116779 | None:intergenic | 60.0% | |
| CTGATGGAGGGCCTTGGAGA+AGG | - | chr4_1:74120495-74120514 | Msa0571490:intron | 60.0% | |
| GTGACCTGCCAGAGAGACTC+CGG | + | chr4_1:74121749-74121768 | None:intergenic | 60.0% | |
| CTCTGGCAGGTCACCGTAAC+CGG | - | chr4_1:74121755-74121774 | Msa0571490:intron | 60.0% | |
| !! | CAGGTGTCACTCCAGCTGAG+AGG | - | chr4_1:74122714-74122733 | Msa0571490:five_prime_UTR | 60.0% |
| ! | GTTGCGTCGTGGCGGAGAGA+GGG | + | chr4_1:74116131-74116150 | None:intergenic | 65.0% |
| ! | TGTTGCGTCGTGGCGGAGAG+AGG | + | chr4_1:74116132-74116151 | None:intergenic | 65.0% |
| !! | GAGGTGCTGATGGAGGGCCT+TGG | - | chr4_1:74120489-74120508 | Msa0571490:intron | 65.0% |
| TCACACGCACGCACGCACGT+AGG | - | chr4_1:74121290-74121309 | Msa0571490:intron | 65.0% | |
| ! | GTCGTGGCGGAGAGAGGGAG+AGG | + | chr4_1:74116126-74116145 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 74115705 | 74123097 | 74115705 | ID=Msa0571490;Name=Msa0571490 |
| chr4_1 | mRNA | 74115705 | 74123097 | 74115705 | ID=Msa0571490-mRNA-1;Parent=Msa0571490;Name=Msa0571490-mRNA-1;_AED=0.09;_eAED=0.09;_QI=387|1|1|1|1|1|15|292|509 |
| chr4_1 | exon | 74115705 | 74116085 | 74115705 | ID=Msa0571490-mRNA-1:exon:25532;Parent=Msa0571490-mRNA-1 |
| chr4_1 | exon | 74116814 | 74116883 | 74116814 | ID=Msa0571490-mRNA-1:exon:25531;Parent=Msa0571490-mRNA-1 |
| chr4_1 | exon | 74116958 | 74117038 | 74116958 | ID=Msa0571490-mRNA-1:exon:25530;Parent=Msa0571490-mRNA-1 |
| chr4_1 | exon | 74117968 | 74118060 | 74117968 | ID=Msa0571490-mRNA-1:exon:25529;Parent=Msa0571490-mRNA-1 |
| chr4_1 | exon | 74118261 | 74118341 | 74118261 | ID=Msa0571490-mRNA-1:exon:25528;Parent=Msa0571490-mRNA-1 |
| chr4_1 | exon | 74118451 | 74118540 | 74118451 | ID=Msa0571490-mRNA-1:exon:25527;Parent=Msa0571490-mRNA-1 |
| chr4_1 | exon | 74118698 | 74118791 | 74118698 | ID=Msa0571490-mRNA-1:exon:25526;Parent=Msa0571490-mRNA-1 |
| chr4_1 | exon | 74119264 | 74119332 | 74119264 | ID=Msa0571490-mRNA-1:exon:25525;Parent=Msa0571490-mRNA-1 |
| chr4_1 | exon | 74119432 | 74119502 | 74119432 | ID=Msa0571490-mRNA-1:exon:25524;Parent=Msa0571490-mRNA-1 |
| chr4_1 | exon | 74119587 | 74119655 | 74119587 | ID=Msa0571490-mRNA-1:exon:25523;Parent=Msa0571490-mRNA-1 |
| chr4_1 | exon | 74119769 | 74119852 | 74119769 | ID=Msa0571490-mRNA-1:exon:25522;Parent=Msa0571490-mRNA-1 |
| chr4_1 | exon | 74120275 | 74120367 | 74120275 | ID=Msa0571490-mRNA-1:exon:25521;Parent=Msa0571490-mRNA-1 |
| chr4_1 | exon | 74120646 | 74120753 | 74120646 | ID=Msa0571490-mRNA-1:exon:25520;Parent=Msa0571490-mRNA-1 |
| chr4_1 | exon | 74120909 | 74121059 | 74120909 | ID=Msa0571490-mRNA-1:exon:25519;Parent=Msa0571490-mRNA-1 |
| chr4_1 | exon | 74122424 | 74123097 | 74122424 | ID=Msa0571490-mRNA-1:exon:25518;Parent=Msa0571490-mRNA-1 |
| chr4_1 | five_prime_UTR | 74122711 | 74123097 | 74122711 | ID=Msa0571490-mRNA-1:five_prime_utr;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74122424 | 74122710 | 74122424 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74120909 | 74121059 | 74120909 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74120646 | 74120753 | 74120646 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74120275 | 74120367 | 74120275 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74119769 | 74119852 | 74119769 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74119587 | 74119655 | 74119587 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74119432 | 74119502 | 74119432 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74119264 | 74119332 | 74119264 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74118698 | 74118791 | 74118698 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74118451 | 74118540 | 74118451 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74118261 | 74118341 | 74118261 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74117968 | 74118060 | 74117968 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74116958 | 74117038 | 74116958 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74116814 | 74116883 | 74116814 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | CDS | 74115997 | 74116085 | 74115997 | ID=Msa0571490-mRNA-1:cds;Parent=Msa0571490-mRNA-1 |
| chr4_1 | three_prime_UTR | 74115705 | 74115996 | 74115705 | ID=Msa0571490-mRNA-1:three_prime_utr;Parent=Msa0571490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
