Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0660320 | XP_003630512.1 | 98.232 | 509 | 8 | 1 | 1 | 509 | 1 | 508 | 0.0 | 1037 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0660320 | sp|Q9ZNX6|GSH1_MEDTR | 98.232 | 509 | 8 | 1 | 1 | 509 | 1 | 508 | 0.0 | 1037 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0660320 | Msa1306730 | 0.981189 | 5.480315e-152 | -8.615850e-47 |
| Msa0660320 | Msa1358360 | 0.824787 | 6.680577e-54 | -8.615850e-47 |
| Msa0571490 | Msa0660320 | 0.843859 | 1.081147e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0660320 | MtrunA17_Chr8g0386791 | 98.232 | 509 | 8 | 1 | 1 | 509 | 1 | 508 | 0.0 | 1037 |
| Msa0660320 | MtrunA17_Chr5g0397471 | 68.467 | 463 | 146 | 0 | 47 | 509 | 50 | 512 | 0.0 | 675 |
| Msa0660320 | MtrunA17_Chr5g0397441 | 64.242 | 165 | 59 | 0 | 345 | 509 | 1 | 165 | 8.01e-69 | 218 |
| Msa0660320 | MtrunA17_Chr5g0397431 | 60.769 | 130 | 50 | 1 | 190 | 319 | 1 | 129 | 3.27e-54 | 179 |
| Msa0660320 | MtrunA17_Chr5g0397421 | 79.545 | 88 | 18 | 0 | 96 | 183 | 10 | 97 | 1.32e-45 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0660320 | AT4G23100.3 | 83.918 | 485 | 77 | 1 | 26 | 509 | 38 | 522 | 0.0 | 861 |
| Msa0660320 | AT4G23100.1 | 83.918 | 485 | 77 | 1 | 26 | 509 | 38 | 522 | 0.0 | 861 |
| Msa0660320 | AT4G23100.2 | 84.296 | 433 | 67 | 1 | 26 | 457 | 38 | 470 | 0.0 | 775 |
Find 157 sgRNAs with CRISPR-Local
Find 415 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGAAAGAAGAGGCTTTA+AGG | 0.162482 | 4_3:-70998395 | Msa0660320:CDS |
| AGAGAATAATAATAATAATT+AGG | 0.180097 | 4_3:+71004392 | None:intergenic |
| AATGATTCTCCCAATCATTA+AGG | 0.238191 | 4_3:+71000036 | None:intergenic |
| GGTTAGGCTAAAGAGGTATT+TGG | 0.243859 | 4_3:-70999885 | Msa0660320:CDS |
| AAACCTGAAACAGCCATATT+TGG | 0.248294 | 4_3:-71000886 | Msa0660320:intron |
| CACTCCAGCTGAGAGGCTTT+TGG | 0.263032 | 4_3:-70997599 | Msa0660320:CDS |
| AAGAGAAATGCTAAGGAATA+AGG | 0.286293 | 4_3:-70999529 | Msa0660320:intron |
| ATGGAAGGTGATAACATTAT+TGG | 0.299516 | 4_3:-71002481 | Msa0660320:CDS |
| GGTTTCTTTGCAACGTGTTT+TGG | 0.299905 | 4_3:-70999580 | Msa0660320:CDS |
| GATATTTGCTCATACTTCAT+AGG | 0.304143 | 4_3:+71002550 | None:intergenic |
| TATGTGCTTTACCAGCATTT+TGG | 0.319362 | 4_3:-70999826 | Msa0660320:CDS |
| TTGCTATACTAAGGTGTATT+CGG | 0.322165 | 4_3:-70997526 | Msa0660320:exon |
| GGTACTGAACATGAAAAGTT+TGG | 0.334434 | 4_3:-71002595 | Msa0660320:CDS |
| GAGAATAATAATAATAATTA+GGG | 0.337084 | 4_3:+71004393 | None:intergenic |
| ATGCCTAAAGTTGGTTCTCT+TGG | 0.339211 | 4_3:-71001366 | Msa0660320:CDS |
| TATCGGTATCAGTCCAAATA+TGG | 0.340970 | 4_3:+71000873 | None:intergenic |
| CTCTGGCAGGTCACCGTAAC+CGG | 0.345887 | 4_3:-70998564 | Msa0660320:intron |
| CTCATCGATTATCTCGCTTC+TGG | 0.346530 | 4_3:-71004095 | Msa0660320:CDS |
| GGAAAGCTTCCTTGTATTCC+TGG | 0.357140 | 4_3:-71000071 | Msa0660320:CDS |
| CTTTGCGTTCCCACTTTGGC+TGG | 0.367217 | 4_3:+71001857 | None:intergenic |
| TAAAGCTGTTGCTGAGGAAA+TGG | 0.367989 | 4_3:-71001905 | Msa0660320:CDS |
| TTGGGCTTGACATGATGTTC+AGG | 0.368172 | 4_3:-71001347 | Msa0660320:CDS |
| GTTGTAAAACCAAGGATAAA+TGG | 0.370943 | 4_3:-71004073 | Msa0660320:CDS |
| TGCCTAAAGTTGGTTCTCTT+GGG | 0.371507 | 4_3:-71001365 | Msa0660320:CDS |
| ACTGTACTGGAATGACCTTC+AGG | 0.375014 | 4_3:-71000261 | Msa0660320:CDS |
| AAAACTACCTTTGGCATCAT+AGG | 0.377899 | 4_3:+71001829 | None:intergenic |
| CGTGTTTATACAGGTAAATC+TGG | 0.378538 | 4_3:-71001209 | Msa0660320:intron |
| GTGTCCTTCCTTACTGTAAA+GGG | 0.394634 | 4_3:-71004716 | Msa0660320:five_prime_UTR |
| GGTGGTCAGTTTGAACTTAG+TGG | 0.399459 | 4_3:-71002266 | Msa0660320:CDS |
| TTCTAATTTCAATACTATCA+TGG | 0.399674 | 4_3:-71004354 | Msa0660320:exon |
| AATTACCGACCCTTAATGAT+TGG | 0.403403 | 4_3:-71000046 | Msa0660320:CDS |
| CACCACATAACTTCCATATT+CGG | 0.407294 | 4_3:-71004277 | Msa0660320:CDS |
| TGGAATTGTATCATGGAAAG+TGG | 0.417984 | 4_3:-70997579 | Msa0660320:CDS |
| TGGTGTCTTTAGACCGGTTA+CGG | 0.418673 | 4_3:+70998551 | None:intergenic |
| ATGAGATCCTGTTTGGTAAG+AGG | 0.418851 | 4_3:+71004113 | None:intergenic |
| GTTGCTGAGGAAATGGGAAT+TGG | 0.427076 | 4_3:-71001898 | Msa0660320:CDS |
| CACGCACCTCCATTTATCCT+TGG | 0.429045 | 4_3:+71004064 | None:intergenic |
| ATCTCACAAGAGAGATAGCC+AGG | 0.430652 | 4_3:+70997411 | None:intergenic |
| TAACATTATTGGACTCAAAC+AGG | 0.431305 | 4_3:-71002470 | Msa0660320:intron |
| AAAGTTCGTTCAAACAACTT+TGG | 0.433129 | 4_3:+70997270 | None:intergenic |
| AAGAAATATATCGACTGTAC+TGG | 0.433749 | 4_3:-71000274 | Msa0660320:CDS |
| CTTTCCAGGTTAGGCTAAAG+AGG | 0.433938 | 4_3:-70999892 | Msa0660320:intron |
| CATGCCTGTACGGTCCTTAT+CGG | 0.437607 | 4_3:+71000856 | None:intergenic |
| GTTCTGAAGCTGACATGATC+AGG | 0.438098 | 4_3:-71001180 | Msa0660320:CDS |
| GAAAGAGAAAGTGTTGGAAA+TGG | 0.445320 | 4_3:+71004244 | None:intergenic |
| TGCGTGAAGAAAAGAAGAAA+GGG | 0.453465 | 4_3:+71004425 | None:intergenic |
| TACTGAACCTCTTACCAAAC+AGG | 0.458876 | 4_3:-71004120 | Msa0660320:CDS |
| AAGAAGAGGCTTTAAGGAAT+CGG | 0.459020 | 4_3:-70998389 | Msa0660320:CDS |
| TTCTTTCACATTTCTGTGGG+AGG | 0.465939 | 4_3:-70997493 | Msa0660320:three_prime_UTR |
| ATGATTCTCCCAATCATTAA+GGG | 0.470462 | 4_3:+71000037 | None:intergenic |
| AGAAGAGGCTTTAAGGAATC+GGG | 0.474397 | 4_3:-70998388 | Msa0660320:CDS |
| AGTGTCCTTCCTTACTGTAA+AGG | 0.474800 | 4_3:-71004717 | Msa0660320:five_prime_UTR |
| AATTGAATTAGTCTCCAGTC+TGG | 0.479048 | 4_3:+70997233 | None:intergenic |
| ATAATCGATGAGATCCTGTT+TGG | 0.479852 | 4_3:+71004106 | None:intergenic |
| ATTACCGACCCTTAATGATT+GGG | 0.480585 | 4_3:-71000045 | Msa0660320:CDS |
| TTACTGTAGGACTTCTTGGC+AGG | 0.481332 | 4_3:-71000092 | Msa0660320:intron |
| AGAAAAGAAGAAAGGGGAAA+TGG | 0.485093 | 4_3:+71004432 | None:intergenic |
| AGCCCAAGAGAACCAACTTT+AGG | 0.487542 | 4_3:+71001363 | None:intergenic |
| TTTGACGAATTGCTATACTA+AGG | 0.490910 | 4_3:-70997535 | Msa0660320:exon |
| AATGAATCTACGACCACCAC+TGG | 0.490920 | 4_3:+71004181 | None:intergenic |
| ATTGGGCTTTCCATCTGTGA+AGG | 0.493504 | 4_3:+71001015 | None:intergenic |
| CACAAACTCACCCAAAATGC+TGG | 0.496129 | 4_3:+70999815 | None:intergenic |
| CTCATACTAACAAACCCATT+GGG | 0.497890 | 4_3:+71000998 | None:intergenic |
| AGTATGAAGGAGTGAATCAA+AGG | 0.500845 | 4_3:-71004465 | Msa0660320:five_prime_UTR |
| TCACAGATGGAAAGCCCAAT+GGG | 0.501872 | 4_3:-71001012 | Msa0660320:CDS |
| TTCAGCAAACCATCTCGAAA+TGG | 0.502074 | 4_3:+70998531 | None:intergenic |
| TGAAGAGAAAGAGAAAGTGT+TGG | 0.505390 | 4_3:+71004238 | None:intergenic |
| ACAAACCTCGGGAAATATAG+TGG | 0.505786 | 4_3:+71000010 | None:intergenic |
| TATGTATCTACAGGATGGCT+TGG | 0.508849 | 4_3:-70998413 | Msa0660320:intron |
| GCTGAAGCATGTTGCTGAAG+AGG | 0.509896 | 4_3:-70998514 | Msa0660320:CDS |
| AATTCCAAAAGCCTCTCAGC+TGG | 0.510828 | 4_3:+70997595 | None:intergenic |
| CATTCTCTCTAATTCCAGAC+TGG | 0.512801 | 4_3:-70997247 | Msa0660320:three_prime_UTR |
| TTCCGAATATGGAAGTTATG+TGG | 0.513238 | 4_3:+71004275 | None:intergenic |
| GAGGTGCTGATGGAGGGCCT+TGG | 0.514200 | 4_3:-70999856 | Msa0660320:CDS |
| GTAGCTGAGGTGGTTAGAAC+AGG | 0.514281 | 4_3:-70998352 | Msa0660320:intron |
| TTGGAGATGAGAGGTGCTGA+TGG | 0.515883 | 4_3:-70999866 | Msa0660320:CDS |
| GCAAATTCACCCTTCACAGA+TGG | 0.516671 | 4_3:-71001025 | Msa0660320:CDS |
| AAAGCTGTTGCTGAGGAAAT+GGG | 0.518116 | 4_3:-71001904 | Msa0660320:CDS |
| ATGTCTTTGCGTTCCCACTT+TGG | 0.523621 | 4_3:+71001853 | None:intergenic |
| CAAAAGGCAGCATGCCTGTA+CGG | 0.523924 | 4_3:+71000846 | None:intergenic |
| CTGATGGAGGGCCTTGGAGA+AGG | 0.524829 | 4_3:-70999850 | Msa0660320:CDS |
| ATGAAAGACTAACTTGATAG+AGG | 0.525706 | 4_3:+71002195 | None:intergenic |
| TTGCGTGAAGAAAAGAAGAA+AGG | 0.527283 | 4_3:+71004424 | None:intergenic |
| TTCCGATAGACAAAATACAT+TGG | 0.532084 | 4_3:+71000298 | None:intergenic |
| TTCTTACAGGCTGCAAAGCT+AGG | 0.533448 | 4_3:+71001143 | None:intergenic |
| CTGTACTGGAATGACCTTCA+GGG | 0.536065 | 4_3:-71000260 | Msa0660320:intron |
| TGCTGAAGAGGTTCTAGAGC+TGG | 0.536393 | 4_3:-70998502 | Msa0660320:CDS |
| CAAATATCAGAATTGCTGAA+TGG | 0.537319 | 4_3:-71002535 | Msa0660320:CDS |
| GTAGGAACATCATCAAAGAA+AGG | 0.539005 | 4_3:-71004535 | Msa0660320:five_prime_UTR |
| TCGAAATGGTGTCTTTAGAC+CGG | 0.540053 | 4_3:+70998545 | None:intergenic |
| TGTTGCGTCGTGGCGTAGAG+AGG | 0.544825 | 4_3:+71004298 | None:intergenic |
| GGAAAAGTTACAAGGATGGA+TGG | 0.544870 | 4_3:-71004695 | Msa0660320:five_prime_UTR |
| AAACTCTGGCTATATAGTCC+TGG | 0.546182 | 4_3:-70997429 | Msa0660320:three_prime_UTR |
| CAGAGCATATCATTAGAGCC+AGG | 0.549413 | 4_3:-71002287 | Msa0660320:CDS |
| AAGAGAATCGTTACTTCCAG+TGG | 0.550025 | 4_3:-71004197 | Msa0660320:CDS |
| TTGGGCTTTCCATCTGTGAA+GGG | 0.550187 | 4_3:+71001016 | None:intergenic |
| GGAATTGTATCATGGAAAGT+GGG | 0.552480 | 4_3:-70997578 | Msa0660320:CDS |
| CTGTAAAGGGAAAAGTTACA+AGG | 0.553222 | 4_3:-71004703 | Msa0660320:five_prime_UTR |
| TCTCATACTAACAAACCCAT+TGG | 0.558109 | 4_3:+71000997 | None:intergenic |
| TAGAAGAAAGAGAAATGCTA+AGG | 0.561246 | 4_3:-70999536 | Msa0660320:CDS |
| TAGAATCGTGTGTAAAACTC+TGG | 0.561580 | 4_3:-70997443 | Msa0660320:three_prime_UTR |
| GTCGTGGCGTAGAGAGGGAG+AGG | 0.561838 | 4_3:+71004304 | None:intergenic |
| GGTAATTCACCAGGAATACA+AGG | 0.562503 | 4_3:+71000062 | None:intergenic |
| TTCACAGATGGAAAGCCCAA+TGG | 0.563301 | 4_3:-71001013 | Msa0660320:CDS |
| ATGGGTTTGTTAGTATGAGA+AGG | 0.567979 | 4_3:-71000994 | Msa0660320:intron |
| TATTTGGACTGATACCGATA+AGG | 0.568294 | 4_3:-71000870 | Msa0660320:CDS |
| GTTGCGTCGTGGCGTAGAGA+GGG | 0.568562 | 4_3:+71004299 | None:intergenic |
| GCAACAACAGCATCTTCAGT+AGG | 0.569442 | 4_3:+71004143 | None:intergenic |
| ATAATAGCTACAAGAAGCAT+AGG | 0.571258 | 4_3:-71004557 | Msa0660320:five_prime_UTR |
| GTAGGTTAAAGCTGTTGCTG+AGG | 0.574248 | 4_3:-71001911 | Msa0660320:intron |
| CTAAAGACACCATTTCGAGA+TGG | 0.576781 | 4_3:-70998540 | Msa0660320:CDS |
| ATTTGACTGGGATAAAGTAA+TGG | 0.577539 | 4_3:-71002500 | Msa0660320:CDS |
| AGCTAGTATTTAATTCATGT+CGG | 0.579380 | 4_3:-70997327 | Msa0660320:three_prime_UTR |
| TCTAAATGCGGTAGCTGAGG+TGG | 0.582814 | 4_3:-70998362 | Msa0660320:CDS |
| CTAAGTTCAAACTGACCACC+TGG | 0.583250 | 4_3:+71002269 | None:intergenic |
| AAGTTACAAGGATGGATGGA+TGG | 0.584462 | 4_3:-71004691 | Msa0660320:five_prime_UTR |
| GACTGGGATAAAGTAATGGA+AGG | 0.584694 | 4_3:-71002496 | Msa0660320:CDS |
| TAGCTACAAGAAGCATAGGT+AGG | 0.587866 | 4_3:-71004553 | Msa0660320:five_prime_UTR |
| CGCTTCTGGTTGTAAAACCA+AGG | 0.589930 | 4_3:-71004081 | Msa0660320:CDS |
| CAGGATGGCTTGGAAAGAAG+AGG | 0.591818 | 4_3:-70998403 | Msa0660320:CDS |
| AGTCTATTCAGAGAGTATGA+AGG | 0.593770 | 4_3:-71004478 | Msa0660320:five_prime_UTR |
| GTTCAGGACATGCACTGTAC+AGG | 0.593879 | 4_3:-71001331 | Msa0660320:intron |
| ATGATCAGGAAATTTCGTGC+TGG | 0.595037 | 4_3:-71001166 | Msa0660320:CDS |
| GTGGCGTAGAGAGGGAGAGG+AGG | 0.597911 | 4_3:+71004307 | None:intergenic |
| AAAGGGAAAAGTTACAAGGA+TGG | 0.598233 | 4_3:-71004699 | Msa0660320:five_prime_UTR |
| TTAAGGGTCGGTAATTCACC+AGG | 0.604160 | 4_3:+71000053 | None:intergenic |
| AGAGAAAGTGTTGGAAATGG+TGG | 0.604482 | 4_3:+71004247 | None:intergenic |
| GAAAGTGTTGGAAATGGTGG+TGG | 0.607705 | 4_3:+71004250 | None:intergenic |
| GATTGGTTTCCAGCCAAAGT+GGG | 0.608140 | 4_3:-71001866 | Msa0660320:CDS |
| GTCTGATGCAGAGTTTCAAG+AGG | 0.610010 | 4_3:+71002239 | None:intergenic |
| CAGGTGTCACTCCAGCTGAG+AGG | 0.611225 | 4_3:-70997606 | Msa0660320:CDS |
| GCGTGAAGAAAAGAAGAAAG+GGG | 0.611568 | 4_3:+71004426 | None:intergenic |
| ATTTCTAAATGCGGTAGCTG+AGG | 0.616025 | 4_3:-70998365 | Msa0660320:CDS |
| GGATTGGTTTCCAGCCAAAG+TGG | 0.618644 | 4_3:-71001867 | Msa0660320:CDS |
| ACAACAGCATCTTCAGTAGG+AGG | 0.620446 | 4_3:+71004146 | None:intergenic |
| CATTGCTGAGAGATTTGACT+GGG | 0.621451 | 4_3:-71002512 | Msa0660320:CDS |
| AGGATAGATGAGAACCCTGA+AGG | 0.624015 | 4_3:+71000246 | None:intergenic |
| GATACCGATAAGGACCGTAC+AGG | 0.624868 | 4_3:-71000860 | Msa0660320:CDS |
| GCATTGCTGAGAGATTTGAC+TGG | 0.627930 | 4_3:-71002513 | Msa0660320:CDS |
| TTCTCCCAATCATTAAGGGT+CGG | 0.628384 | 4_3:+71000041 | None:intergenic |
| GAGATGAGAGGTGCTGATGG+AGG | 0.629565 | 4_3:-70999863 | Msa0660320:CDS |
| CAAAGAAAGGAACTGAGTAA+CGG | 0.634079 | 4_3:-71004522 | Msa0660320:five_prime_UTR |
| AGATGAGAGGTGCTGATGGA+GGG | 0.638194 | 4_3:-70999862 | Msa0660320:CDS |
| AAGAGGTATTTGGAGATGAG+AGG | 0.640411 | 4_3:-70999875 | Msa0660320:CDS |
| GAACTGAGTAACGGAACAAG+CGG | 0.640513 | 4_3:-71004513 | Msa0660320:five_prime_UTR |
| AGACATACCTATGATGCCAA+AGG | 0.645310 | 4_3:-71001836 | Msa0660320:intron |
| TCTGATGCAGAGTTTCAAGA+GGG | 0.645543 | 4_3:+71002240 | None:intergenic |
| AAAGCACATAACCTTCTCCA+AGG | 0.645896 | 4_3:+70999839 | None:intergenic |
| TTTGACCACTATATTTCCCG+AGG | 0.655534 | 4_3:-71000015 | Msa0660320:intron |
| AGAATCGTTACTTCCAGTGG+TGG | 0.656440 | 4_3:-71004194 | Msa0660320:CDS |
| GGTAGGGATATTGTACGATG+AGG | 0.665122 | 4_3:-70999601 | Msa0660320:CDS |
| GTAAAACCAAGGATAAATGG+AGG | 0.667037 | 4_3:-71004070 | Msa0660320:intron |
| AGAGGTTCTAGAGCTGGCAA+AGG | 0.684570 | 4_3:-70998496 | Msa0660320:intron |
| AGTTATGTGGTGTTGCGTCG+TGG | 0.686687 | 4_3:+71004288 | None:intergenic |
| GGAATCGGGATTTCTAAATG+CGG | 0.701354 | 4_3:-70998374 | Msa0660320:CDS |
| AGCATATCATTAGAGCCAGG+TGG | 0.733348 | 4_3:-71002284 | Msa0660320:CDS |
| CTGATGCAGAGTTTCAAGAG+GGG | 0.736237 | 4_3:+71002241 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAGAATAATAATAATAATTA+GGG | + | chr4_3:70997575-70997594 | None:intergenic | 10.0% |
| !! | AGAGAATAATAATAATAATT+AGG | + | chr4_3:70997576-70997595 | None:intergenic | 10.0% |
| !!! | TATGTGTTTAATATTTTTTA+TGG | - | chr4_3:71004333-71004352 | Msa0660320:CDS | 10.0% |
| !!! | ATGCTAATTTTTTAATTGAA+AGG | - | chr4_3:70997361-70997380 | Msa0660320:three_prime_UTR | 15.0% |
| !!! | ATAAAAACATAGTGTATTTT+TGG | - | chr4_3:70998657-70998676 | Msa0660320:intron | 15.0% |
| !! | ACAAATCTATAAGAATTTAT+GGG | + | chr4_3:70998924-70998943 | None:intergenic | 15.0% |
| !!! | TAATATGTTATTTTTCCATT+AGG | - | chr4_3:70999816-70999835 | Msa0660320:intron | 15.0% |
| !!! | AATATGTTATTTTTCCATTA+GGG | - | chr4_3:70999817-70999836 | Msa0660320:intron | 15.0% |
| !!! | CTTTTATCCATTTTAAAAAT+AGG | + | chr4_3:71000235-71000254 | None:intergenic | 15.0% |
| !!! | TTTTAACTTTCAACAAAAAA+TGG | - | chr4_3:71000321-71000340 | Msa0660320:CDS | 15.0% |
| !! | TTAATAAAGCAACATTAAAA+AGG | + | chr4_3:71001038-71001057 | None:intergenic | 15.0% |
| !!! | TTTTTAATGTTGCTTTATTA+AGG | - | chr4_3:71001037-71001056 | Msa0660320:CDS | 15.0% |
| !!! | TGATTTTTTTTTTTTACTGT+AGG | - | chr4_3:71001860-71001879 | Msa0660320:CDS | 15.0% |
| !!! | TATTAGTTTTACAATTTAAC+TGG | - | chr4_3:71001981-71002000 | Msa0660320:intron | 15.0% |
| !!! | TATTTCAATTTTTACTTGTT+AGG | - | chr4_3:71002803-71002822 | Msa0660320:intron | 15.0% |
| !!! | ATTTCAATTTTTACTTGTTA+GGG | - | chr4_3:71002804-71002823 | Msa0660320:intron | 15.0% |
| !!! | TTTTTAAAAAAAAAACAAGG+AGG | + | chr4_3:71003189-71003208 | None:intergenic | 15.0% |
| !! | ATTCATAATTTATATCTAGT+TGG | - | chr4_3:71003733-71003752 | Msa0660320:intron | 15.0% |
| !! | ATATATGTACTAACATAATA+TGG | + | chr4_3:71003913-71003932 | None:intergenic | 15.0% |
| !! | TTCTAATTTCAATACTATCA+TGG | - | chr4_3:70997611-70997630 | Msa0660320:intron | 20.0% |
| !! | CACTTTATATTTGTTTGATT+AGG | - | chr4_3:70998162-70998181 | Msa0660320:intron | 20.0% |
| !! | TTTATTAACTGATAGTAATG+AGG | + | chr4_3:70998642-70998661 | None:intergenic | 20.0% |
| !! | CACAAATCTATAAGAATTTA+TGG | + | chr4_3:70998925-70998944 | None:intergenic | 20.0% |
| !! | CAATAACTAATAGTATTACA+AGG | + | chr4_3:70999030-70999049 | None:intergenic | 20.0% |
| !! | AAATTATGACACAATATAAG+AGG | + | chr4_3:70999300-70999319 | None:intergenic | 20.0% |
| !!! | CTTTTGACATTATTATTTGT+AGG | - | chr4_3:71000036-71000055 | Msa0660320:CDS | 20.0% |
| !!! | AACACAACCTATTTTTAAAA+TGG | - | chr4_3:71000225-71000244 | Msa0660320:intron | 20.0% |
| !! | TAATTGAATTGAGTTAGTTA+AGG | + | chr4_3:71000522-71000541 | None:intergenic | 20.0% |
| !!! | CTTTTCATAGTGTTTAAATT+AGG | + | chr4_3:71000703-71000722 | None:intergenic | 20.0% |
| !! | AAAATATCAATGTTTCTTAC+AGG | + | chr4_3:71000838-71000857 | None:intergenic | 20.0% |
| !! | ATATTGTTATCTCTTTCTTT+AGG | - | chr4_3:71001413-71001432 | Msa0660320:intron | 20.0% |
| !!! | TGTTACATCTTGTTTAAAAA+CGG | - | chr4_3:71001534-71001553 | Msa0660320:intron | 20.0% |
| !!! | TTTAAAAACGGTTTTATCAA+TGG | - | chr4_3:71001546-71001565 | Msa0660320:intron | 20.0% |
| !! | AAACTAATAAAAACAAACCT+CGG | + | chr4_3:71001970-71001989 | None:intergenic | 20.0% |
| !! | TAGTAAAATAACTACGAAAA+TGG | + | chr4_3:71002035-71002054 | None:intergenic | 20.0% |
| !! | AATGAAGAAAAAATATTGCA+AGG | + | chr4_3:71002468-71002487 | None:intergenic | 20.0% |
| !!! | TTGAAAGAAAAGCTATTTTT+GGG | + | chr4_3:71002532-71002551 | None:intergenic | 20.0% |
| !!! | ATTGAAAGAAAAGCTATTTT+TGG | + | chr4_3:71002533-71002552 | None:intergenic | 20.0% |
| !! | TTAATTTCAGAAATAGTCAT+TGG | - | chr4_3:71003020-71003039 | Msa0660320:intron | 20.0% |
| !! | TAATTTCAGAAATAGTCATT+GGG | - | chr4_3:71003021-71003040 | Msa0660320:intron | 20.0% |
| !!! | AGTTAACAATCACTTTTTAT+GGG | + | chr4_3:71003153-71003172 | None:intergenic | 20.0% |
| !!! | TAGTTAACAATCACTTTTTA+TGG | + | chr4_3:71003154-71003173 | None:intergenic | 20.0% |
| !!! | CGTTTGTTTTAGATTTTTTT+AGG | + | chr4_3:71003337-71003356 | None:intergenic | 20.0% |
| !! | AGAAATTTAGTATGGATAAT+GGG | + | chr4_3:71003362-71003381 | None:intergenic | 20.0% |
| !! | TAGAAATTTAGTATGGATAA+TGG | + | chr4_3:71003363-71003382 | None:intergenic | 20.0% |
| !! | ATCAGTATAGAAATTTAGTA+TGG | + | chr4_3:71003370-71003389 | None:intergenic | 20.0% |
| !! | TAAATTTCTATACTGATAAC+CGG | - | chr4_3:71003373-71003392 | Msa0660320:intron | 20.0% |
| !! | TAGTACATATATCTCTATAA+TGG | - | chr4_3:71003921-71003940 | Msa0660320:intron | 20.0% |
| !! | AGTACATATATCTCTATAAT+GGG | - | chr4_3:71003922-71003941 | Msa0660320:intron | 20.0% |
| !!! | GATCAAAGTTATTTTTTTCT+TGG | - | chr4_3:71004156-71004175 | Msa0660320:CDS | 20.0% |
| !! | AAATTAACTAATGCAATCAT+TGG | - | chr4_3:71004275-71004294 | Msa0660320:CDS | 20.0% |
| !! | AAATATTAAACACATACCAA+AGG | + | chr4_3:71004329-71004348 | None:intergenic | 20.0% |
| !!! | GTGTTTAATATTTTTTATGG+TGG | - | chr4_3:71004336-71004355 | Msa0660320:CDS | 20.0% |
| !!! | AGAATATTGTTAGAAGTGTT+AGG | + | chr4_3:70998856-70998875 | None:intergenic | 25.0% |
| !!! | TGCTTTAGAAAATCAACAAA+TGG | + | chr4_3:70999105-70999124 | None:intergenic | 25.0% |
| !!! | TTCTAAAGCAACAAATGAAA+TGG | - | chr4_3:70999115-70999134 | Msa0660320:intron | 25.0% |
| !! | TCTAAAGCAACAAATGAAAT+GGG | - | chr4_3:70999116-70999135 | Msa0660320:intron | 25.0% |
| !!! | CATATAGTTTCTTTGAAGTA+TGG | - | chr4_3:70999263-70999282 | Msa0660320:intron | 25.0% |
| !! | TCCATTAGGGAAATAAATTT+TGG | - | chr4_3:70999830-70999849 | Msa0660320:CDS | 25.0% |
| ! | TCCAAAATTTATTTCCCTAA+TGG | + | chr4_3:70999834-70999853 | None:intergenic | 25.0% |
| !! | AATCATAGATGGCTAAATTT+TGG | - | chr4_3:70999939-70999958 | Msa0660320:intron | 25.0% |
| ! | AAAAAATACATGCCTAAAGT+TGG | - | chr4_3:71000590-71000609 | Msa0660320:intron | 25.0% |
| !!! | TGTTTCAGGTTTATGAAAAT+GGG | + | chr4_3:71001071-71001090 | None:intergenic | 25.0% |
| !! | TTTCTATGCCTTCTAATTTT+AGG | - | chr4_3:71001209-71001228 | Msa0660320:intron | 25.0% |
| ! | TCCTTCATATAAAGTGTATT+TGG | - | chr4_3:71001279-71001298 | Msa0660320:intron | 25.0% |
| ! | TCCAAATACACTTTATATGA+AGG | + | chr4_3:71001283-71001302 | None:intergenic | 25.0% |
| ! | TTGGAAATATACACATTGAA+TGG | - | chr4_3:71001298-71001317 | Msa0660320:intron | 25.0% |
| !! | TTCCAATGTATTTTGTCTAT+CGG | - | chr4_3:71001665-71001684 | Msa0660320:intron | 25.0% |
| ! | AACTAATAAAAACAAACCTC+GGG | + | chr4_3:71001969-71001988 | None:intergenic | 25.0% |
| ! | AAGCTGAAAAAATTATGAAG+TGG | - | chr4_3:71002777-71002796 | Msa0660320:intron | 25.0% |
| !! | GATAAATATGATTTGAAACC+TGG | - | chr4_3:71002843-71002862 | Msa0660320:intron | 25.0% |
| !!! | CTCTAAAATGAAAAGCTATT+AGG | + | chr4_3:71003234-71003253 | None:intergenic | 25.0% |
| !! | TGTCATTTAAGTGTTTGTTT+AGG | + | chr4_3:71003296-71003315 | None:intergenic | 25.0% |
| ! | GTACATATATCTCTATAATG+GGG | - | chr4_3:71003923-71003942 | Msa0660320:intron | 25.0% |
| ! | TATATGTACTATTAAGAGTC+CGG | + | chr4_3:71003951-71003970 | None:intergenic | 25.0% |
| ! | ATGCTATAATATTTGAGAGT+TGG | - | chr4_3:71004194-71004213 | Msa0660320:CDS | 25.0% |
| !!! | TTAATATTTTTTATGGTGGC+AGG | - | chr4_3:71004340-71004359 | Msa0660320:exon | 25.0% |
| !!! | ATCTGATGTATTTTTTTGCT+TGG | - | chr4_3:71004599-71004618 | Msa0660320:five_prime_UTR | 25.0% |
| ! | AGCTAGTATTTAATTCATGT+CGG | - | chr4_3:71004638-71004657 | Msa0660320:five_prime_UTR | 25.0% |
| ! | TAACTTTTCCCTTTACAGTA+AGG | + | chr4_3:70997260-70997279 | None:intergenic | 30.0% |
| AAGTGAATGAAAAAGAGAAG+TGG | - | chr4_3:70997313-70997332 | Msa0660320:three_prime_UTR | 30.0% | |
| ! | ATAATAGCTACAAGAAGCAT+AGG | - | chr4_3:70997408-70997427 | Msa0660320:three_prime_UTR | 30.0% |
| GTTGTAAAACCAAGGATAAA+TGG | - | chr4_3:70997892-70997911 | Msa0660320:intron | 30.0% | |
| AGTCTCAGAAGAATATCATT+AGG | - | chr4_3:70998256-70998275 | Msa0660320:intron | 30.0% | |
| !!! | ATAGTGTATTTTTGGTTCTG+CGG | - | chr4_3:70998665-70998684 | Msa0660320:intron | 30.0% |
| TTAAAAAACAGCGCTTCAAA+CGG | - | chr4_3:70998976-70998995 | Msa0660320:intron | 30.0% | |
| ATCTTTGTCGCATTTATCAA+TGG | - | chr4_3:70999055-70999074 | Msa0660320:intron | 30.0% | |
| ! | ACTTTTATCCATCACTTCAA+AGG | + | chr4_3:70999153-70999172 | None:intergenic | 30.0% |
| !! | TTTGAAGTGATGGATAAAAG+TGG | - | chr4_3:70999152-70999171 | Msa0660320:intron | 30.0% |
| ! | AATTTGTTTGTCTTCTCTTC+AGG | - | chr4_3:70999315-70999334 | Msa0660320:intron | 30.0% |
| GATATTTGCTCATACTTCAT+AGG | + | chr4_3:70999418-70999437 | None:intergenic | 30.0% | |
| CAAATATCAGAATTGCTGAA+TGG | - | chr4_3:70999430-70999449 | Msa0660320:intron | 30.0% | |
| ATTTGACTGGGATAAAGTAA+TGG | - | chr4_3:70999465-70999484 | Msa0660320:intron | 30.0% | |
| ATGGAAGGTGATAACATTAT+TGG | - | chr4_3:70999484-70999503 | Msa0660320:intron | 30.0% | |
| TAACATTATTGGACTCAAAC+AGG | - | chr4_3:70999495-70999514 | Msa0660320:intron | 30.0% | |
| ATGAAAGACTAACTTGATAG+AGG | + | chr4_3:70999773-70999792 | None:intergenic | 30.0% | |
| CAGATCTGAAAGAAATATCT+TGG | + | chr4_3:71000006-71000025 | None:intergenic | 30.0% | |
| ! | GAAATGGGAATTGGATTTTT+GGG | - | chr4_3:71000076-71000095 | Msa0660320:CDS | 30.0% |
| ! | AAATGGGAATTGGATTTTTG+GGG | - | chr4_3:71000077-71000096 | Msa0660320:CDS | 30.0% |
| AGTTCAAGGACTTAAAAATG+AGG | + | chr4_3:71000169-71000188 | None:intergenic | 30.0% | |
| AACTATTTAATCCTGATGTC+AGG | + | chr4_3:71000300-71000319 | None:intergenic | 30.0% | |
| GCTCAAATGTTACTAAGAAA+AGG | + | chr4_3:71000422-71000441 | None:intergenic | 30.0% | |
| GTCATTGTTAAGTTACTAAG+TGG | + | chr4_3:71000483-71000502 | None:intergenic | 30.0% | |
| ACTATGAAAAGAATATCGTC+TGG | - | chr4_3:71000712-71000731 | Msa0660320:intron | 30.0% | |
| !! | CTGTTTCAGGTTTATGAAAA+TGG | + | chr4_3:71001072-71001091 | None:intergenic | 30.0% |
| AAGGAGTCATCAAAAACAAA+AGG | + | chr4_3:71001138-71001157 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTTGATGACTCCTT+CGG | - | chr4_3:71001138-71001157 | Msa0660320:intron | 30.0% |
| AAAAAAAATCACTTACCCGA+AGG | + | chr4_3:71001157-71001176 | None:intergenic | 30.0% | |
| AATATACACATTGAATGGCT+AGG | - | chr4_3:71001303-71001322 | Msa0660320:intron | 30.0% | |
| GAGTTCGAAAACAAAATAAG+TGG | + | chr4_3:71001603-71001622 | None:intergenic | 30.0% | |
| TTCCGATAGACAAAATACAT+TGG | + | chr4_3:71001670-71001689 | None:intergenic | 30.0% | |
| ! | AAGAAATATATCGACTGTAC+TGG | - | chr4_3:71001691-71001710 | Msa0660320:intron | 30.0% |
| CTAAGATGACACGAATATTA+AGG | + | chr4_3:71001742-71001761 | None:intergenic | 30.0% | |
| CTTAATATTCGTGTCATCTT+AGG | - | chr4_3:71001740-71001759 | Msa0660320:intron | 30.0% | |
| !!! | TTTTTTACTGTAGGACTTCT+TGG | - | chr4_3:71001869-71001888 | Msa0660320:CDS | 30.0% |
| ATGATTCTCCCAATCATTAA+GGG | + | chr4_3:71001931-71001950 | None:intergenic | 30.0% | |
| AATGATTCTCCCAATCATTA+AGG | + | chr4_3:71001932-71001951 | None:intergenic | 30.0% | |
| ACTTAAACATTACTCTTTCC+AGG | - | chr4_3:71002059-71002078 | Msa0660320:intron | 30.0% | |
| TATGTTATGTGACTTTCTCA+AGG | + | chr4_3:71002201-71002220 | None:intergenic | 30.0% | |
| AGTCACATAACATATTCGAA+AGG | - | chr4_3:71002207-71002226 | Msa0660320:intron | 30.0% | |
| ATAGAAGAACATGCAAAGAA+GGG | + | chr4_3:71002291-71002310 | None:intergenic | 30.0% | |
| TAGAAGAAAGAGAAATGCTA+AGG | - | chr4_3:71002429-71002448 | Msa0660320:intron | 30.0% | |
| AAGAGAAATGCTAAGGAATA+AGG | - | chr4_3:71002436-71002455 | Msa0660320:intron | 30.0% | |
| !! | AGAAATGGATTTTGCATGAA+GGG | + | chr4_3:71002572-71002591 | None:intergenic | 30.0% |
| !! | TAGAAATGGATTTTGCATGA+AGG | + | chr4_3:71002573-71002592 | None:intergenic | 30.0% |
| AAGATTTAATTGCAGAAAGC+TGG | + | chr4_3:71002616-71002635 | None:intergenic | 30.0% | |
| TACTAGAAAAAGGATAACTG+AGG | - | chr4_3:71002699-71002718 | Msa0660320:intron | 30.0% | |
| GGATAAACACTTGATCAAAA+TGG | - | chr4_3:71002720-71002739 | Msa0660320:intron | 30.0% | |
| ! | AATATGATTTGAAACCTGGA+TGG | - | chr4_3:71002847-71002866 | Msa0660320:intron | 30.0% |
| TTTAACTGAGCCATGAAATA+GGG | + | chr4_3:71003706-71003725 | None:intergenic | 30.0% | |
| ATTTAACTGAGCCATGAAAT+AGG | + | chr4_3:71003707-71003726 | None:intergenic | 30.0% | |
| ATAATCACTAGAAGTTAGCT+TGG | + | chr4_3:71003869-71003888 | None:intergenic | 30.0% | |
| ! | AACTCTTCACAATTTTGCAT+TGG | + | chr4_3:71004049-71004068 | None:intergenic | 30.0% |
| ! | CTTATAACGTTGAGATTTTG+TGG | - | chr4_3:71004123-71004142 | Msa0660320:CDS | 30.0% |
| !! | TGAGATTTTGTGGTTGATTT+AGG | - | chr4_3:71004133-71004152 | Msa0660320:CDS | 30.0% |
| !! | GAGATTTTGTGGTTGATTTA+GGG | - | chr4_3:71004134-71004153 | Msa0660320:CDS | 30.0% |
| ATTCTACCACAAGTTTATGA+AGG | + | chr4_3:71004253-71004272 | None:intergenic | 30.0% | |
| !! | GAAGTTTTATCTGTTTCCTT+TGG | - | chr4_3:71004310-71004329 | Msa0660320:CDS | 30.0% |
| TTTGACGAATTGCTATACTA+AGG | - | chr4_3:71004430-71004449 | Msa0660320:five_prime_UTR | 30.0% | |
| TTGCTATACTAAGGTGTATT+CGG | - | chr4_3:71004439-71004458 | Msa0660320:five_prime_UTR | 30.0% | |
| ! | CTTTTCTTTCACATTTCTGT+GGG | - | chr4_3:71004469-71004488 | Msa0660320:five_prime_UTR | 30.0% |
| !!! | ATTGTATAAGCCACCTTTTT+TGG | - | chr4_3:71004498-71004517 | Msa0660320:five_prime_UTR | 30.0% |
| !!! | TTGTATAAGCCACCTTTTTT+GGG | - | chr4_3:71004499-71004518 | Msa0660320:five_prime_UTR | 30.0% |
| AAAGTTCGTTCAAACAACTT+TGG | + | chr4_3:71004698-71004717 | None:intergenic | 30.0% | |
| ! | TTTTCCCTTTACAGTAAGGA+AGG | + | chr4_3:70997256-70997275 | None:intergenic | 35.0% |
| CTGTAAAGGGAAAAGTTACA+AGG | - | chr4_3:70997262-70997281 | Msa0660320:three_prime_UTR | 35.0% | |
| AAAGGGAAAAGTTACAAGGA+TGG | - | chr4_3:70997266-70997285 | Msa0660320:three_prime_UTR | 35.0% | |
| GTAGGAACATCATCAAAGAA+AGG | - | chr4_3:70997430-70997449 | Msa0660320:three_prime_UTR | 35.0% | |
| CAAAGAAAGGAACTGAGTAA+CGG | - | chr4_3:70997443-70997462 | Msa0660320:three_prime_UTR | 35.0% | |
| ! | AGTCTATTCAGAGAGTATGA+AGG | - | chr4_3:70997487-70997506 | Msa0660320:three_prime_UTR | 35.0% |
| AGTATGAAGGAGTGAATCAA+AGG | - | chr4_3:70997500-70997519 | Msa0660320:three_prime_UTR | 35.0% | |
| AGAAAAGAAGAAAGGGGAAA+TGG | + | chr4_3:70997536-70997555 | None:intergenic | 35.0% | |
| TGCGTGAAGAAAAGAAGAAA+GGG | + | chr4_3:70997543-70997562 | None:intergenic | 35.0% | |
| TTGCGTGAAGAAAAGAAGAA+AGG | + | chr4_3:70997544-70997563 | None:intergenic | 35.0% | |
| CACCACATAACTTCCATATT+CGG | - | chr4_3:70997688-70997707 | Msa0660320:intron | 35.0% | |
| TTCCGAATATGGAAGTTATG+TGG | + | chr4_3:70997693-70997712 | None:intergenic | 35.0% | |
| !! | GAAAGAGAAAGTGTTGGAAA+TGG | + | chr4_3:70997724-70997743 | None:intergenic | 35.0% |
| ! | TGAAGAGAAAGAGAAAGTGT+TGG | + | chr4_3:70997730-70997749 | None:intergenic | 35.0% |
| ATAATCGATGAGATCCTGTT+TGG | + | chr4_3:70997862-70997881 | None:intergenic | 35.0% | |
| GTAAAACCAAGGATAAATGG+AGG | - | chr4_3:70997895-70997914 | Msa0660320:intron | 35.0% | |
| ! | GTTCTCTTTTCATGAATTGC+TGG | - | chr4_3:70998057-70998076 | Msa0660320:intron | 35.0% |
| GTGACAGATACAAGAAATCA+AGG | + | chr4_3:70998145-70998164 | None:intergenic | 35.0% | |
| ! | TCGTATATTTAGCTCAGCTA+GGG | + | chr4_3:70998813-70998832 | None:intergenic | 35.0% |
| !! | AATGTACTCCTTTGAAGTGA+TGG | - | chr4_3:70999142-70999161 | Msa0660320:intron | 35.0% |
| GATGGATAAAAGTGGTTAGA+TGG | - | chr4_3:70999160-70999179 | Msa0660320:intron | 35.0% | |
| TTAGATGGAACATCTTCCTA+GGG | - | chr4_3:70999175-70999194 | Msa0660320:intron | 35.0% | |
| TTCATGTTCTCTTGCAGAAT+AGG | - | chr4_3:70999349-70999368 | Msa0660320:intron | 35.0% | |
| ! | GGTACTGAACATGAAAAGTT+TGG | - | chr4_3:70999370-70999389 | Msa0660320:intron | 35.0% |
| !!! | GAAAAGTTTGGTTTTGAGCT+TGG | - | chr4_3:70999382-70999401 | Msa0660320:intron | 35.0% |
| CTTTGTGATTCAGCATTCAT+TGG | - | chr4_3:70999588-70999607 | Msa0660320:CDS | 35.0% | |
| !! | CTGAGTTCTGAAATCATAGA+TGG | - | chr4_3:70999928-70999947 | Msa0660320:intron | 35.0% |
| ! | GGAAATGGGAATTGGATTTT+TGG | - | chr4_3:71000075-71000094 | Msa0660320:CDS | 35.0% |
| AAAACTACCTTTGGCATCAT+AGG | + | chr4_3:71000139-71000158 | None:intergenic | 35.0% | |
| GGAGAAAGAAAAACTACCTT+TGG | + | chr4_3:71000148-71000167 | None:intergenic | 35.0% | |
| AGATATGCTCAATCAGTTCA+AGG | + | chr4_3:71000183-71000202 | None:intergenic | 35.0% | |
| ACAATAATCTCAAGTCACTG+TGG | + | chr4_3:71000387-71000406 | None:intergenic | 35.0% | |
| TTAGTAACATTTGAGCTCCA+TGG | - | chr4_3:71000426-71000445 | Msa0660320:intron | 35.0% | |
| TAGTAACATTTGAGCTCCAT+GGG | - | chr4_3:71000427-71000446 | Msa0660320:intron | 35.0% | |
| CGTGTTTATACAGGTAAATC+TGG | - | chr4_3:71000756-71000775 | Msa0660320:intron | 35.0% | |
| CTCATACTAACAAACCCATT+GGG | + | chr4_3:71000970-71000989 | None:intergenic | 35.0% | |
| TCTCATACTAACAAACCCAT+TGG | + | chr4_3:71000971-71000990 | None:intergenic | 35.0% | |
| !! | ATGGGTTTGTTAGTATGAGA+AGG | - | chr4_3:71000971-71000990 | Msa0660320:intron | 35.0% |
| ! | TGTTAGTATGAGAAGGTACA+TGG | - | chr4_3:71000978-71000997 | Msa0660320:intron | 35.0% |
| AGGTTTATGAAAATGGGACA+AGG | + | chr4_3:71001065-71001084 | None:intergenic | 35.0% | |
| AAACCTGAAACAGCCATATT+TGG | - | chr4_3:71001079-71001098 | Msa0660320:intron | 35.0% | |
| TATCGGTATCAGTCCAAATA+TGG | + | chr4_3:71001095-71001114 | None:intergenic | 35.0% | |
| TATTTGGACTGATACCGATA+AGG | - | chr4_3:71001095-71001114 | Msa0660320:intron | 35.0% | |
| !!! | TTGTTTTTGATGACTCCTTC+GGG | - | chr4_3:71001139-71001158 | Msa0660320:intron | 35.0% |
| ! | CTTCTAATTTTAGGCTTCGT+GGG | - | chr4_3:71001218-71001237 | Msa0660320:intron | 35.0% |
| TGGTGTTTCATGCAATGATT+TGG | - | chr4_3:71001566-71001585 | Msa0660320:intron | 35.0% | |
| TTCACGATGAAGAATGACAA+GGG | + | chr4_3:71001783-71001802 | None:intergenic | 35.0% | |
| TTTCACGATGAAGAATGACA+AGG | + | chr4_3:71001784-71001803 | None:intergenic | 35.0% | |
| AATTACCGACCCTTAATGAT+TGG | - | chr4_3:71001919-71001938 | Msa0660320:intron | 35.0% | |
| ATTACCGACCCTTAATGATT+GGG | - | chr4_3:71001920-71001939 | Msa0660320:intron | 35.0% | |
| AACATTACTCTTTCCAGGTT+AGG | - | chr4_3:71002064-71002083 | Msa0660320:intron | 35.0% | |
| ! | TATGTGCTTTACCAGCATTT+TGG | - | chr4_3:71002139-71002158 | Msa0660320:intron | 35.0% |
| ! | ATGTGCTTTACCAGCATTTT+GGG | - | chr4_3:71002140-71002159 | Msa0660320:intron | 35.0% |
| CATAGAAGAACATGCAAAGA+AGG | + | chr4_3:71002292-71002311 | None:intergenic | 35.0% | |
| ! | TTTTGGATATGACAGCAGAT+TGG | - | chr4_3:71002402-71002421 | Msa0660320:intron | 35.0% |
| !! | GAAATGGATTTTGCATGAAG+GGG | + | chr4_3:71002571-71002590 | None:intergenic | 35.0% |
| ATCCATTTCTACTTGAAGCA+TGG | - | chr4_3:71002582-71002601 | Msa0660320:CDS | 35.0% | |
| TCCATTTCTACTTGAAGCAT+GGG | - | chr4_3:71002583-71002602 | Msa0660320:CDS | 35.0% | |
| !! | AAATGGATTTTGCATGAAGG+GGG | + | chr4_3:71002570-71002589 | None:intergenic | 35.0% |
| !! | CAAATGGATTTTGCATGAAG+GGG | + | chr4_3:71002646-71002665 | None:intergenic | 35.0% |
| !! | CCAAATGGATTTTGCATGAA+GGG | + | chr4_3:71002647-71002666 | None:intergenic | 35.0% |
| CCTTCATGCAAAATCCATTT+GGG | - | chr4_3:71002570-71002589 | Msa0660320:CDS | 35.0% | |
| !! | CTTTTTCTAGTACAGAAAGC+TGG | + | chr4_3:71002691-71002710 | None:intergenic | 35.0% |
| CAGCTTTCTGTACTAGAAAA+AGG | - | chr4_3:71002689-71002708 | Msa0660320:intron | 35.0% | |
| AGCTAACTTAAGTTCTCAGA+CGG | + | chr4_3:71002754-71002773 | None:intergenic | 35.0% | |
| !! | ATGGATTGGTATGTATCTAC+AGG | - | chr4_3:71003543-71003562 | Msa0660320:intron | 35.0% |
| ATTGGTATGTATCTACAGGA+TGG | - | chr4_3:71003547-71003566 | Msa0660320:intron | 35.0% | |
| !! | AAGAAGAGGCTTTAAGGAAT+CGG | - | chr4_3:71003576-71003595 | Msa0660320:intron | 35.0% |
| ACAGCCTCTAACTAAAACAA+GGG | + | chr4_3:71003759-71003778 | None:intergenic | 35.0% | |
| AACAGCCTCTAACTAAAACA+AGG | + | chr4_3:71003760-71003779 | None:intergenic | 35.0% | |
| ! | ATATCTCTATAATGGGGTAC+CGG | - | chr4_3:71003929-71003948 | Msa0660320:intron | 35.0% |
| !! | TATTTGAGAGTTGGTATCCA+TGG | - | chr4_3:71004203-71004222 | Msa0660320:CDS | 35.0% |
| ATGTTAAGCTTGAAAGTCCA+TGG | + | chr4_3:71004223-71004242 | None:intergenic | 35.0% | |
| !!! | AGGCTTTTGGAATTGTATCA+TGG | - | chr4_3:71004379-71004398 | Msa0660320:five_prime_UTR | 35.0% |
| TGGAATTGTATCATGGAAAG+TGG | - | chr4_3:71004386-71004405 | Msa0660320:five_prime_UTR | 35.0% | |
| GGAATTGTATCATGGAAAGT+GGG | - | chr4_3:71004387-71004406 | Msa0660320:five_prime_UTR | 35.0% | |
| ! | GCTTTTCTTTCACATTTCTG+TGG | - | chr4_3:71004468-71004487 | Msa0660320:five_prime_UTR | 35.0% |
| TAGAATCGTGTGTAAAACTC+TGG | - | chr4_3:71004522-71004541 | Msa0660320:five_prime_UTR | 35.0% | |
| AGTGTCCTTCCTTACTGTAA+AGG | - | chr4_3:70997248-70997267 | Msa0660320:three_prime_UTR | 40.0% | |
| GTGTCCTTCCTTACTGTAAA+GGG | - | chr4_3:70997249-70997268 | Msa0660320:three_prime_UTR | 40.0% | |
| GGAAAAGTTACAAGGATGGA+TGG | - | chr4_3:70997270-70997289 | Msa0660320:three_prime_UTR | 40.0% | |
| AAGTTACAAGGATGGATGGA+TGG | - | chr4_3:70997274-70997293 | Msa0660320:three_prime_UTR | 40.0% | |
| ! | TAGCTACAAGAAGCATAGGT+AGG | - | chr4_3:70997412-70997431 | Msa0660320:three_prime_UTR | 40.0% |
| GCGTGAAGAAAAGAAGAAAG+GGG | + | chr4_3:70997542-70997561 | None:intergenic | 40.0% | |
| !! | AGAGAAAGTGTTGGAAATGG+TGG | + | chr4_3:70997721-70997740 | None:intergenic | 40.0% |
| AAGAGAATCGTTACTTCCAG+TGG | - | chr4_3:70997768-70997787 | Msa0660320:intron | 40.0% | |
| TACTGAACCTCTTACCAAAC+AGG | - | chr4_3:70997845-70997864 | Msa0660320:intron | 40.0% | |
| ATGAGATCCTGTTTGGTAAG+AGG | + | chr4_3:70997855-70997874 | None:intergenic | 40.0% | |
| TCGAATATGTAGCGCAACTT+AGG | - | chr4_3:70998411-70998430 | Msa0660320:intron | 40.0% | |
| TCGAATATGTAGCGCAACTT+AGG | - | chr4_3:70998411-70998430 | Msa0660320:intron | 40.0% | |
| ACGTGAGTTTCATGTCAACA+TGG | - | chr4_3:70998561-70998580 | Msa0660320:intron | 40.0% | |
| TCAAATATGTAGCTCAGCTC+AGG | - | chr4_3:70998744-70998763 | Msa0660320:intron | 40.0% | |
| ! | GTCGTATATTTAGCTCAGCT+AGG | + | chr4_3:70998814-70998833 | None:intergenic | 40.0% |
| GTCGCATTTATCAATGGTGA+TGG | - | chr4_3:70999061-70999080 | Msa0660320:intron | 40.0% | |
| GTTAGATGGAACATCTTCCT+AGG | - | chr4_3:70999174-70999193 | Msa0660320:intron | 40.0% | |
| AAAAGTGAACGCAAAACCCT+AGG | + | chr4_3:70999194-70999213 | None:intergenic | 40.0% | |
| !! | TTTTGCGTTCACTTTTCACG+AGG | - | chr4_3:70999198-70999217 | Msa0660320:intron | 40.0% |
| CATTGCTGAGAGATTTGACT+GGG | - | chr4_3:70999453-70999472 | Msa0660320:intron | 40.0% | |
| ! | GACTGGGATAAAGTAATGGA+AGG | - | chr4_3:70999469-70999488 | Msa0660320:intron | 40.0% |
| TTGGATTGCCATGCTATTGT+TGG | - | chr4_3:70999607-70999626 | Msa0660320:intron | 40.0% | |
| TTGACTCTCCAACAATAGCA+TGG | + | chr4_3:70999618-70999637 | None:intergenic | 40.0% | |
| TCTGATGCAGAGTTTCAAGA+GGG | + | chr4_3:70999728-70999747 | None:intergenic | 40.0% | |
| TAAAGCTGTTGCTGAGGAAA+TGG | - | chr4_3:71000060-71000079 | Msa0660320:CDS | 40.0% | |
| AAAGCTGTTGCTGAGGAAAT+GGG | - | chr4_3:71000061-71000080 | Msa0660320:CDS | 40.0% | |
| !! | GGAATTGGATTTTTGGGGAT+TGG | - | chr4_3:71000082-71000101 | Msa0660320:CDS | 40.0% |
| AGACATACCTATGATGCCAA+AGG | - | chr4_3:71000129-71000148 | Msa0660320:intron | 40.0% | |
| ACTGATTGAGCATATCTGCA+TGG | - | chr4_3:71000186-71000205 | Msa0660320:intron | 40.0% | |
| GGATAAAAGCCCTCTGTTTA+TGG | - | chr4_3:71000246-71000265 | Msa0660320:intron | 40.0% | |
| ACCAATGGACCATAAACAGA+GGG | + | chr4_3:71000258-71000277 | None:intergenic | 40.0% | |
| AATTCCACATGTCATTCCCA+TGG | + | chr4_3:71000446-71000465 | None:intergenic | 40.0% | |
| TGGGAATGACATGTGGAATT+TGG | - | chr4_3:71000446-71000465 | Msa0660320:intron | 40.0% | |
| ! | TACTGTCCGTCTTTTTGTTG+TGG | - | chr4_3:71000544-71000563 | Msa0660320:intron | 40.0% |
| ! | ATGCCTAAAGTTGGTTCTCT+TGG | - | chr4_3:71000599-71000618 | Msa0660320:intron | 40.0% |
| ! | TGCCTAAAGTTGGTTCTCTT+GGG | - | chr4_3:71000600-71000619 | Msa0660320:intron | 40.0% |
| ATCAGCTCTCGTGTTTATAC+AGG | - | chr4_3:71000747-71000766 | Msa0660320:intron | 40.0% | |
| ATGATCAGGAAATTTCGTGC+TGG | - | chr4_3:71000799-71000818 | Msa0660320:intron | 40.0% | |
| ! | AGTCCAAATATGGCTGTTTC+AGG | + | chr4_3:71001085-71001104 | None:intergenic | 40.0% |
| CCACGAAGCCTAAAATTAGA+AGG | + | chr4_3:71001220-71001239 | None:intergenic | 40.0% | |
| ! | CCTTCTAATTTTAGGCTTCG+TGG | - | chr4_3:71001217-71001236 | Msa0660320:intron | 40.0% |
| GGTAATTCACCAGGAATACA+AGG | + | chr4_3:71001906-71001925 | None:intergenic | 40.0% | |
| TTCTCCCAATCATTAAGGGT+CGG | + | chr4_3:71001927-71001946 | None:intergenic | 40.0% | |
| TTTGACCACTATATTTCCCG+AGG | - | chr4_3:71001950-71001969 | Msa0660320:intron | 40.0% | |
| ACAAACCTCGGGAAATATAG+TGG | + | chr4_3:71001958-71001977 | None:intergenic | 40.0% | |
| AATACCTCTTTAGCCTAACC+TGG | + | chr4_3:71002080-71002099 | None:intergenic | 40.0% | |
| !! | GGTTAGGCTAAAGAGGTATT+TGG | - | chr4_3:71002080-71002099 | Msa0660320:intron | 40.0% |
| !! | AAGAGGTATTTGGAGATGAG+AGG | - | chr4_3:71002090-71002109 | Msa0660320:intron | 40.0% |
| AAAGCACATAACCTTCTCCA+AGG | + | chr4_3:71002129-71002148 | None:intergenic | 40.0% | |
| ATAATGTTCCTGATTGTGCC+AGG | - | chr4_3:71002343-71002362 | Msa0660320:intron | 40.0% | |
| ! | GGTTTCTTTGCAACGTGTTT+TGG | - | chr4_3:71002385-71002404 | Msa0660320:intron | 40.0% |
| CCTAGCTTACTTATGCTTCT+GGG | + | chr4_3:71002503-71002522 | None:intergenic | 40.0% | |
| ACCTAGCTTACTTATGCTTC+TGG | + | chr4_3:71002504-71002523 | None:intergenic | 40.0% | |
| CCCTTCATGCAAAATCCATT+TGG | - | chr4_3:71002569-71002588 | Msa0660320:CDS | 40.0% | |
| !! | CCCAAATGGATTTTGCATGA+AGG | + | chr4_3:71002648-71002667 | None:intergenic | 40.0% |
| TTAGGGTCTTGAGTTTCAGA+CGG | - | chr4_3:71002821-71002840 | Msa0660320:intron | 40.0% | |
| GGAGAGATATGTTCCTTCTT+TGG | - | chr4_3:71002868-71002887 | Msa0660320:intron | 40.0% | |
| AGAGAGAGAGAATCCAAAGA+AGG | + | chr4_3:71002884-71002903 | None:intergenic | 40.0% | |
| TACGTACGTACGTACATACT+CGG | - | chr4_3:71002962-71002981 | Msa0660320:intron | 40.0% | |
| TCGAAATGGTGTCTTTAGAC+CGG | + | chr4_3:71003423-71003442 | None:intergenic | 40.0% | |
| CTAAAGACACCATTTCGAGA+TGG | - | chr4_3:71003425-71003444 | Msa0660320:intron | 40.0% | |
| TTCAGCAAACCATCTCGAAA+TGG | + | chr4_3:71003437-71003456 | None:intergenic | 40.0% | |
| CATGCTCTTAGCAACATTGA+TGG | + | chr4_3:71003526-71003545 | None:intergenic | 40.0% | |
| CATCAATGTTGCTAAGAGCA+TGG | - | chr4_3:71003524-71003543 | Msa0660320:intron | 40.0% | |
| ! | ATGTTGCTAAGAGCATGGAT+TGG | - | chr4_3:71003529-71003548 | Msa0660320:intron | 40.0% |
| TATGTATCTACAGGATGGCT+TGG | - | chr4_3:71003552-71003571 | Msa0660320:intron | 40.0% | |
| CTTGGAAAGAAGAGGCTTTA+AGG | - | chr4_3:71003570-71003589 | Msa0660320:intron | 40.0% | |
| !! | AGAAGAGGCTTTAAGGAATC+GGG | - | chr4_3:71003577-71003596 | Msa0660320:intron | 40.0% |
| GGAATCGGGATTTCTAAATG+CGG | - | chr4_3:71003591-71003610 | Msa0660320:intron | 40.0% | |
| ATTTCTAAATGCGGTAGCTG+AGG | - | chr4_3:71003600-71003619 | Msa0660320:intron | 40.0% | |
| CTGAAGCATGGCACAAAAAA+TGG | + | chr4_3:71003679-71003698 | None:intergenic | 40.0% | |
| ! | TTTTTGTGCCATGCTTCAGA+TGG | - | chr4_3:71003680-71003699 | Msa0660320:intron | 40.0% |
| !!! | TTGGCCCTTGTTTTAGTTAG+AGG | - | chr4_3:71003752-71003771 | Msa0660320:intron | 40.0% |
| CTTGCACCTTCATAAACTTG+TGG | - | chr4_3:71004244-71004263 | Msa0660320:CDS | 40.0% | |
| TTCTTTCACATTTCTGTGGG+AGG | - | chr4_3:71004472-71004491 | Msa0660320:five_prime_UTR | 40.0% | |
| ACGATTCTACCCAAAAAAGG+TGG | + | chr4_3:71004511-71004530 | None:intergenic | 40.0% | |
| CACACGATTCTACCCAAAAA+AGG | + | chr4_3:71004514-71004533 | None:intergenic | 40.0% | |
| AAACTCTGGCTATATAGTCC+TGG | - | chr4_3:71004536-71004555 | Msa0660320:five_prime_UTR | 40.0% | |
| CATTCTCTCTAATTCCAGAC+TGG | - | chr4_3:71004718-71004737 | Msa0660320:five_prime_UTR | 40.0% | |
| ! | GAACTGAGTAACGGAACAAG+CGG | - | chr4_3:70997452-70997471 | Msa0660320:three_prime_UTR | 45.0% |
| !!! | TGGTGGTGGTTTTCCGAATA+TGG | + | chr4_3:70997704-70997723 | None:intergenic | 45.0% |
| !! | GAAAGTGTTGGAAATGGTGG+TGG | + | chr4_3:70997718-70997737 | None:intergenic | 45.0% |
| AGAATCGTTACTTCCAGTGG+TGG | - | chr4_3:70997771-70997790 | Msa0660320:intron | 45.0% | |
| AATGAATCTACGACCACCAC+TGG | + | chr4_3:70997787-70997806 | None:intergenic | 45.0% | |
| ACAACAGCATCTTCAGTAGG+AGG | + | chr4_3:70997822-70997841 | None:intergenic | 45.0% | |
| GCAACAACAGCATCTTCAGT+AGG | + | chr4_3:70997825-70997844 | None:intergenic | 45.0% | |
| ! | CTCATCGATTATCTCGCTTC+TGG | - | chr4_3:70997870-70997889 | Msa0660320:intron | 45.0% |
| ! | CGCTTCTGGTTGTAAAACCA+AGG | - | chr4_3:70997884-70997903 | Msa0660320:intron | 45.0% |
| TATGTAGCTCAGCTCAGCTA+GGG | + | chr4_3:70998363-70998382 | None:intergenic | 45.0% | |
| ATATGTAGCTCAGCTCAGCT+AGG | + | chr4_3:70998364-70998383 | None:intergenic | 45.0% | |
| GTATAGCGTATGTGTGCTTC+TGG | - | chr4_3:70998433-70998452 | Msa0660320:intron | 45.0% | |
| GTATAGCGTATGTGTGCTTC+TGG | - | chr4_3:70998433-70998452 | Msa0660320:intron | 45.0% | |
| GCATTGCTGAGAGATTTGAC+TGG | - | chr4_3:70999452-70999471 | Msa0660320:intron | 45.0% | |
| TTGCGCACATTGTGTGAAAC+AGG | - | chr4_3:70999650-70999669 | Msa0660320:intron | 45.0% | |
| TGCGCACATTGTGTGAAACA+GGG | - | chr4_3:70999651-70999670 | Msa0660320:intron | 45.0% | |
| CAGAGCATATCATTAGAGCC+AGG | - | chr4_3:70999678-70999697 | Msa0660320:intron | 45.0% | |
| AGCATATCATTAGAGCCAGG+TGG | - | chr4_3:70999681-70999700 | Msa0660320:intron | 45.0% | |
| CTAAGTTCAAACTGACCACC+TGG | + | chr4_3:70999699-70999718 | None:intergenic | 45.0% | |
| GGTGGTCAGTTTGAACTTAG+TGG | - | chr4_3:70999699-70999718 | Msa0660320:intron | 45.0% | |
| CTGATGCAGAGTTTCAAGAG+GGG | + | chr4_3:70999727-70999746 | None:intergenic | 45.0% | |
| GTCTGATGCAGAGTTTCAAG+AGG | + | chr4_3:70999729-70999748 | None:intergenic | 45.0% | |
| GTAGGTTAAAGCTGTTGCTG+AGG | - | chr4_3:71000054-71000073 | Msa0660320:CDS | 45.0% | |
| GTTGCTGAGGAAATGGGAAT+TGG | - | chr4_3:71000067-71000086 | Msa0660320:CDS | 45.0% | |
| !! | GATTGGTTTCCAGCCAAAGT+GGG | - | chr4_3:71000099-71000118 | Msa0660320:intron | 45.0% |
| ATGTCTTTGCGTTCCCACTT+TGG | + | chr4_3:71000115-71000134 | None:intergenic | 45.0% | |
| GACCAATGGACCATAAACAG+AGG | + | chr4_3:71000259-71000278 | None:intergenic | 45.0% | |
| ! | TGGTCCATTGGTCGTGATTT+TGG | - | chr4_3:71000266-71000285 | Msa0660320:CDS | 45.0% |
| CAAGCCAAAATCACGACCAA+TGG | + | chr4_3:71000273-71000292 | None:intergenic | 45.0% | |
| TGGCTTGATTTCCTGACATC+AGG | - | chr4_3:71000286-71000305 | Msa0660320:CDS | 45.0% | |
| CCTGAGCCACAACAAAAAGA+CGG | + | chr4_3:71000553-71000572 | None:intergenic | 45.0% | |
| !! | CGTCTTTTTGTTGTGGCTCA+GGG | - | chr4_3:71000551-71000570 | Msa0660320:intron | 45.0% |
| AGCCCAAGAGAACCAACTTT+AGG | + | chr4_3:71000605-71000624 | None:intergenic | 45.0% | |
| TTGGGCTTGACATGATGTTC+AGG | - | chr4_3:71000618-71000637 | Msa0660320:intron | 45.0% | |
| ! | CAGGTGACTCGTGTGATTTT+TGG | - | chr4_3:71000653-71000672 | Msa0660320:intron | 45.0% |
| !! | GTTCTGAAGCTGACATGATC+AGG | - | chr4_3:71000785-71000804 | Msa0660320:intron | 45.0% |
| TTCTTACAGGCTGCAAAGCT+AGG | + | chr4_3:71000825-71000844 | None:intergenic | 45.0% | |
| GCTGTTGCTATCTGTTGTGA+AGG | + | chr4_3:71000913-71000932 | None:intergenic | 45.0% | |
| GCAAATTCACCCTTCACAGA+TGG | - | chr4_3:71000940-71000959 | Msa0660320:intron | 45.0% | |
| TTGGGCTTTCCATCTGTGAA+GGG | + | chr4_3:71000952-71000971 | None:intergenic | 45.0% | |
| ATTGGGCTTTCCATCTGTGA+AGG | + | chr4_3:71000953-71000972 | None:intergenic | 45.0% | |
| TTCACAGATGGAAAGCCCAA+TGG | - | chr4_3:71000952-71000971 | Msa0660320:intron | 45.0% | |
| TCACAGATGGAAAGCCCAAT+GGG | - | chr4_3:71000953-71000972 | Msa0660320:intron | 45.0% | |
| GGATCGCTTGATCAGCAAAA+GGG | + | chr4_3:71001262-71001281 | None:intergenic | 45.0% | |
| AGGATCGCTTGATCAGCAAA+AGG | + | chr4_3:71001263-71001282 | None:intergenic | 45.0% | |
| ! | GTTTTCGAACTCTCTGATGC+AGG | - | chr4_3:71001611-71001630 | Msa0660320:intron | 45.0% |
| ACTGTACTGGAATGACCTTC+AGG | - | chr4_3:71001704-71001723 | Msa0660320:intron | 45.0% | |
| CTGTACTGGAATGACCTTCA+GGG | - | chr4_3:71001705-71001724 | Msa0660320:intron | 45.0% | |
| AGGATAGATGAGAACCCTGA+AGG | + | chr4_3:71001722-71001741 | None:intergenic | 45.0% | |
| CTACATGAACACTGTGGTCT+AGG | + | chr4_3:71001815-71001834 | None:intergenic | 45.0% | |
| GCAAAGCTACATGAACACTG+TGG | + | chr4_3:71001821-71001840 | None:intergenic | 45.0% | |
| TTACTGTAGGACTTCTTGGC+AGG | - | chr4_3:71001873-71001892 | Msa0660320:CDS | 45.0% | |
| GGAAAGCTTCCTTGTATTCC+TGG | - | chr4_3:71001894-71001913 | Msa0660320:CDS | 45.0% | |
| TTAAGGGTCGGTAATTCACC+AGG | + | chr4_3:71001915-71001934 | None:intergenic | 45.0% | |
| CTTTCCAGGTTAGGCTAAAG+AGG | - | chr4_3:71002073-71002092 | Msa0660320:intron | 45.0% | |
| CACAAACTCACCCAAAATGC+TGG | + | chr4_3:71002153-71002172 | None:intergenic | 45.0% | |
| CATCGTACAATATCCCTACC+TGG | + | chr4_3:71002364-71002383 | None:intergenic | 45.0% | |
| GGTAGGGATATTGTACGATG+AGG | - | chr4_3:71002364-71002383 | Msa0660320:intron | 45.0% | |
| ! | CCCAGAAGCATAAGTAAGCT+AGG | - | chr4_3:71002500-71002519 | Msa0660320:CDS | 45.0% |
| GCCCATGCTTCAAGTAGAAA+TGG | + | chr4_3:71002587-71002606 | None:intergenic | 45.0% | |
| ATCCATTTGGGCTTGAAGCA+TGG | - | chr4_3:71002657-71002676 | Msa0660320:intron | 45.0% | |
| TCCATTTGGGCTTGAAGCAT+GGG | - | chr4_3:71002658-71002677 | Msa0660320:intron | 45.0% | |
| AGGAACATATCTCTCCATCC+AGG | + | chr4_3:71002864-71002883 | None:intergenic | 45.0% | |
| TGGTGTCTTTAGACCGGTTA+CGG | + | chr4_3:71003417-71003436 | None:intergenic | 45.0% | |
| ! | AAATAGGGCCATCTGAAGCA+TGG | + | chr4_3:71003691-71003710 | None:intergenic | 45.0% |
| CTTCAGATGGCCCTATTTCA+TGG | - | chr4_3:71003693-71003712 | Msa0660320:intron | 45.0% | |
| ATGAGAGAGCAGCAGAACAT+TGG | + | chr4_3:71003796-71003815 | None:intergenic | 45.0% | |
| AATTCCAAAAGCCTCTCAGC+TGG | + | chr4_3:71004373-71004392 | None:intergenic | 45.0% | |
| ATCTCACAAGAGAGATAGCC+AGG | + | chr4_3:71004557-71004576 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTAAAAAAAAAACA+AGG | + | chr4_3:71003192-71003211 | None:intergenic | 5.0% |
| !!! | TTTTTTTAAAAAAAAAGTTT+TGG | - | chr4_3:71003197-71003216 | Msa0660320:intron | 5.0% |
| !!! | TTTTTTAAAAAAAAAGTTTT+GGG | - | chr4_3:71003198-71003217 | Msa0660320:intron | 5.0% |
| !! | AGTTATGTGGTGTTGCGTCG+TGG | + | chr4_3:70997680-70997699 | None:intergenic | 50.0% |
| CACGCACCTCCATTTATCCT+TGG | + | chr4_3:70997904-70997923 | None:intergenic | 50.0% | |
| !!! | TGCTGTTTTGTCGTCACCTC+AGG | - | chr4_3:70998289-70998308 | Msa0660320:intron | 50.0% |
| ! | TTTTGTCGTCACCTCAGGTC+AGG | - | chr4_3:70998294-70998313 | Msa0660320:intron | 50.0% |
| CTCAGCTAGGGTAATCACTC+AGG | + | chr4_3:70998801-70998820 | None:intergenic | 50.0% | |
| GCGCACATTGTGTGAAACAG+GGG | - | chr4_3:70999652-70999671 | Msa0660320:intron | 50.0% | |
| !! | GGATTGGTTTCCAGCCAAAG+TGG | - | chr4_3:71000098-71000117 | Msa0660320:intron | 50.0% |
| GCCCTCTGTTTATGGTCCAT+TGG | - | chr4_3:71000254-71000273 | Msa0660320:intron | 50.0% | |
| AGCTCCATGGGAATGACATG+TGG | - | chr4_3:71000439-71000458 | Msa0660320:intron | 50.0% | |
| !! | CCGTCTTTTTGTTGTGGCTC+AGG | - | chr4_3:71000550-71000569 | Msa0660320:intron | 50.0% |
| GTTCAGGACATGCACTGTAC+AGG | - | chr4_3:71000634-71000653 | Msa0660320:intron | 50.0% | |
| GATACCGATAAGGACCGTAC+AGG | - | chr4_3:71001105-71001124 | Msa0660320:intron | 50.0% | |
| CATGCCTGTACGGTCCTTAT+CGG | + | chr4_3:71001112-71001131 | None:intergenic | 50.0% | |
| CAAAAGGCAGCATGCCTGTA+CGG | + | chr4_3:71001122-71001141 | None:intergenic | 50.0% | |
| !! | TTGGAGATGAGAGGTGCTGA+TGG | - | chr4_3:71002099-71002118 | Msa0660320:intron | 50.0% |
| !! | AGATGAGAGGTGCTGATGGA+GGG | - | chr4_3:71002103-71002122 | Msa0660320:intron | 50.0% |
| TGTTCCTGATTGTGCCAGGT+AGG | - | chr4_3:71002347-71002366 | Msa0660320:intron | 50.0% | |
| GTTCCTGATTGTGCCAGGTA+GGG | - | chr4_3:71002348-71002367 | Msa0660320:intron | 50.0% | |
| TATCCCTACCTGGCACAATC+AGG | + | chr4_3:71002354-71002373 | None:intergenic | 50.0% | |
| ACTGATAACCGGAGTCTCTC+TGG | - | chr4_3:71003384-71003403 | Msa0660320:intron | 50.0% | |
| GCTGAAGCATGTTGCTGAAG+AGG | - | chr4_3:71003451-71003470 | Msa0660320:intron | 50.0% | |
| !! | TGCTGAAGAGGTTCTAGAGC+TGG | - | chr4_3:71003463-71003482 | Msa0660320:intron | 50.0% |
| !! | AGAGGTTCTAGAGCTGGCAA+AGG | - | chr4_3:71003469-71003488 | Msa0660320:intron | 50.0% |
| ! | CAGGATGGCTTGGAAAGAAG+AGG | - | chr4_3:71003562-71003581 | Msa0660320:intron | 50.0% |
| TCTAAATGCGGTAGCTGAGG+TGG | - | chr4_3:71003603-71003622 | Msa0660320:intron | 50.0% | |
| GTAGCTGAGGTGGTTAGAAC+AGG | - | chr4_3:71003613-71003632 | Msa0660320:intron | 50.0% | |
| CTTTGCGTTCCCACTTTGGC+TGG | + | chr4_3:71000111-71000130 | None:intergenic | 55.0% | |
| !! | GAGATGAGAGGTGCTGATGG+AGG | - | chr4_3:71002102-71002121 | Msa0660320:intron | 55.0% |
| GCCCATGCTTCAAGCCCAAA+TGG | + | chr4_3:71002662-71002681 | None:intergenic | 55.0% | |
| ATAACCGGAGTCTCTCTGGC+AGG | - | chr4_3:71003388-71003407 | Msa0660320:intron | 55.0% | |
| ! | CACTCCAGCTGAGAGGCTTT+TGG | - | chr4_3:71004366-71004385 | Msa0660320:five_prime_UTR | 55.0% |
| GTTGCGTCGTGGCGTAGAGA+GGG | + | chr4_3:70997669-70997688 | None:intergenic | 60.0% | |
| TGTTGCGTCGTGGCGTAGAG+AGG | + | chr4_3:70997670-70997689 | None:intergenic | 60.0% | |
| GCGACGCATTACCTGACCTG+AGG | + | chr4_3:70998308-70998327 | None:intergenic | 60.0% | |
| CTGATGGAGGGCCTTGGAGA+AGG | - | chr4_3:71002115-71002134 | Msa0660320:intron | 60.0% | |
| GTGACCTGCCAGAGAGACTC+CGG | + | chr4_3:71003395-71003414 | None:intergenic | 60.0% | |
| CTCTGGCAGGTCACCGTAAC+CGG | - | chr4_3:71003401-71003420 | Msa0660320:intron | 60.0% | |
| !! | CAGGTGTCACTCCAGCTGAG+AGG | - | chr4_3:71004359-71004378 | Msa0660320:five_prime_UTR | 60.0% |
| GTGGCGTAGAGAGGGAGAGG+AGG | + | chr4_3:70997661-70997680 | None:intergenic | 65.0% | |
| GTCGTGGCGTAGAGAGGGAG+AGG | + | chr4_3:70997664-70997683 | None:intergenic | 65.0% | |
| !! | GAGGTGCTGATGGAGGGCCT+TGG | - | chr4_3:71002109-71002128 | Msa0660320:intron | 65.0% |
| TCACACGCACGCACGCACGT+AGG | - | chr4_3:71002935-71002954 | Msa0660320:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 70997245 | 71004742 | 70997245 | ID=Msa0660320;Name=Msa0660320 |
| chr4_3 | mRNA | 70997245 | 71004742 | 70997245 | ID=Msa0660320-mRNA-1;Parent=Msa0660320;Name=Msa0660320-mRNA-1;_AED=0.11;_eAED=0.11;_QI=385|1|1|1|1|1|15|292|509 |
| chr4_3 | exon | 70997245 | 70997625 | 70997245 | ID=Msa0660320-mRNA-1:exon:21229;Parent=Msa0660320-mRNA-1 |
| chr4_3 | exon | 70998353 | 70998422 | 70998353 | ID=Msa0660320-mRNA-1:exon:21228;Parent=Msa0660320-mRNA-1 |
| chr4_3 | exon | 70998497 | 70998577 | 70998497 | ID=Msa0660320-mRNA-1:exon:21227;Parent=Msa0660320-mRNA-1 |
| chr4_3 | exon | 70999530 | 70999622 | 70999530 | ID=Msa0660320-mRNA-1:exon:21226;Parent=Msa0660320-mRNA-1 |
| chr4_3 | exon | 70999826 | 70999906 | 70999826 | ID=Msa0660320-mRNA-1:exon:21225;Parent=Msa0660320-mRNA-1 |
| chr4_3 | exon | 71000016 | 71000105 | 71000016 | ID=Msa0660320-mRNA-1:exon:21224;Parent=Msa0660320-mRNA-1 |
| chr4_3 | exon | 71000261 | 71000354 | 71000261 | ID=Msa0660320-mRNA-1:exon:21223;Parent=Msa0660320-mRNA-1 |
| chr4_3 | exon | 71000827 | 71000895 | 71000827 | ID=Msa0660320-mRNA-1:exon:21222;Parent=Msa0660320-mRNA-1 |
| chr4_3 | exon | 71000995 | 71001065 | 71000995 | ID=Msa0660320-mRNA-1:exon:21221;Parent=Msa0660320-mRNA-1 |
| chr4_3 | exon | 71001150 | 71001218 | 71001150 | ID=Msa0660320-mRNA-1:exon:21220;Parent=Msa0660320-mRNA-1 |
| chr4_3 | exon | 71001332 | 71001415 | 71001332 | ID=Msa0660320-mRNA-1:exon:21219;Parent=Msa0660320-mRNA-1 |
| chr4_3 | exon | 71001837 | 71001929 | 71001837 | ID=Msa0660320-mRNA-1:exon:21218;Parent=Msa0660320-mRNA-1 |
| chr4_3 | exon | 71002208 | 71002315 | 71002208 | ID=Msa0660320-mRNA-1:exon:21217;Parent=Msa0660320-mRNA-1 |
| chr4_3 | exon | 71002471 | 71002621 | 71002471 | ID=Msa0660320-mRNA-1:exon:21216;Parent=Msa0660320-mRNA-1 |
| chr4_3 | exon | 71004071 | 71004742 | 71004071 | ID=Msa0660320-mRNA-1:exon:21215;Parent=Msa0660320-mRNA-1 |
| chr4_3 | five_prime_UTR | 71004358 | 71004742 | 71004358 | ID=Msa0660320-mRNA-1:five_prime_utr;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 71004071 | 71004357 | 71004071 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 71002471 | 71002621 | 71002471 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 71002208 | 71002315 | 71002208 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 71001837 | 71001929 | 71001837 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 71001332 | 71001415 | 71001332 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 71001150 | 71001218 | 71001150 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 71000995 | 71001065 | 71000995 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 71000827 | 71000895 | 71000827 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 71000261 | 71000354 | 71000261 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 71000016 | 71000105 | 71000016 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 70999826 | 70999906 | 70999826 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 70999530 | 70999622 | 70999530 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 70998497 | 70998577 | 70998497 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 70998353 | 70998422 | 70998353 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | CDS | 70997537 | 70997625 | 70997537 | ID=Msa0660320-mRNA-1:cds;Parent=Msa0660320-mRNA-1 |
| chr4_3 | three_prime_UTR | 70997245 | 70997536 | 70997245 | ID=Msa0660320-mRNA-1:three_prime_utr;Parent=Msa0660320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
