Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306730 | sp|Q9ZNX6|GSH1_MEDTR | 98.232 | 509 | 8 | 1 | 1 | 509 | 1 | 508 | 0.0 | 1037 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306730 | G7LHC5 | 98.232 | 509 | 8 | 1 | 1 | 509 | 1 | 508 | 0.0 | 1037 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0660320 | Msa1306730 | 0.981189 | 5.480315e-152 | -8.615850e-47 |
| Msa0571490 | Msa1306730 | 0.870853 | 1.066140e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306730 | MtrunA17_Chr8g0386791 | 98.232 | 509 | 8 | 1 | 1 | 509 | 1 | 508 | 0.0 | 1037 |
| Msa1306730 | MtrunA17_Chr5g0397471 | 68.467 | 463 | 146 | 0 | 47 | 509 | 50 | 512 | 0.0 | 675 |
| Msa1306730 | MtrunA17_Chr5g0397441 | 64.242 | 165 | 59 | 0 | 345 | 509 | 1 | 165 | 8.01e-69 | 218 |
| Msa1306730 | MtrunA17_Chr5g0397431 | 60.769 | 130 | 50 | 1 | 190 | 319 | 1 | 129 | 3.27e-54 | 179 |
| Msa1306730 | MtrunA17_Chr5g0397421 | 79.545 | 88 | 18 | 0 | 96 | 183 | 10 | 97 | 1.32e-45 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306730 | AT4G23100.3 | 83.918 | 485 | 77 | 1 | 26 | 509 | 38 | 522 | 0.0 | 861 |
| Msa1306730 | AT4G23100.1 | 83.918 | 485 | 77 | 1 | 26 | 509 | 38 | 522 | 0.0 | 861 |
| Msa1306730 | AT4G23100.2 | 84.296 | 433 | 67 | 1 | 26 | 457 | 38 | 470 | 0.0 | 775 |
Find 157 sgRNAs with CRISPR-Local
Find 415 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGAAAGAAGAGGCTTTA+AGG | 0.162482 | 8_4:+1667911 | Msa1306730:CDS |
| AGAGAATAATAATAATAATT+AGG | 0.180097 | 8_4:-1661941 | None:intergenic |
| AATGATTCTCCCAATCATTA+AGG | 0.238191 | 8_4:-1666279 | None:intergenic |
| GGTTAGGCTAAAGAGGTATT+TGG | 0.243859 | 8_4:+1666430 | Msa1306730:intron |
| AAACCTGAAACAGCCATATT+TGG | 0.248294 | 8_4:+1665429 | Msa1306730:intron |
| CACTCCAGCTGAGAGGCTTT+TGG | 0.263032 | 8_4:+1668707 | Msa1306730:CDS |
| AAGAGAAATGCTAAGGAATA+AGG | 0.286293 | 8_4:+1666783 | Msa1306730:CDS |
| ATGGAAGGTGATAACATTAT+TGG | 0.299516 | 8_4:+1663834 | Msa1306730:CDS |
| GGTTTCTTTGCAACGTGTTT+TGG | 0.299905 | 8_4:+1666732 | Msa1306730:CDS |
| GATATTTGCTCATACTTCAT+AGG | 0.304143 | 8_4:-1663765 | None:intergenic |
| TATGTGCTTTACCAGCATTT+TGG | 0.319362 | 8_4:+1666489 | Msa1306730:CDS |
| TTGCTATACTAAGGTGTATT+CGG | 0.322165 | 8_4:+1668780 | Msa1306730:exon |
| GGTACTGAACATGAAAAGTT+TGG | 0.334434 | 8_4:+1663720 | Msa1306730:CDS |
| GAGAATAATAATAATAATTA+GGG | 0.337084 | 8_4:-1661940 | None:intergenic |
| ATGCCTAAAGTTGGTTCTCT+TGG | 0.339211 | 8_4:+1664949 | Msa1306730:CDS |
| TATCGGTATCAGTCCAAATA+TGG | 0.340970 | 8_4:-1665442 | None:intergenic |
| CTCTGGCAGGTCACCGTAAC+CGG | 0.345887 | 8_4:+1667742 | Msa1306730:intron |
| CTCATCGATTATCTCGCTTC+TGG | 0.346530 | 8_4:+1662238 | Msa1306730:CDS |
| GGAAAGCTTCCTTGTATTCC+TGG | 0.357140 | 8_4:+1666244 | Msa1306730:CDS |
| CTTTGCGTTCCCACTTTGGC+TGG | 0.367217 | 8_4:-1664458 | None:intergenic |
| TAAAGCTGTTGCTGAGGAAA+TGG | 0.367989 | 8_4:+1664410 | Msa1306730:CDS |
| TTGGGCTTGACATGATGTTC+AGG | 0.368172 | 8_4:+1664968 | Msa1306730:CDS |
| GTTGTAAAACCAAGGATAAA+TGG | 0.370943 | 8_4:+1662260 | Msa1306730:CDS |
| TGCCTAAAGTTGGTTCTCTT+GGG | 0.371507 | 8_4:+1664950 | Msa1306730:CDS |
| ACTGTACTGGAATGACCTTC+AGG | 0.375014 | 8_4:+1666054 | Msa1306730:CDS |
| AAAACTACCTTTGGCATCAT+AGG | 0.377899 | 8_4:-1664486 | None:intergenic |
| CGTGTTTATACAGGTAAATC+TGG | 0.378538 | 8_4:+1665106 | Msa1306730:intron |
| GTGTCCTTCCTTACTGTAAA+GGG | 0.394634 | 8_4:+1661617 | Msa1306730:five_prime_UTR |
| GGTGGTCAGTTTGAACTTAG+TGG | 0.399459 | 8_4:+1664049 | Msa1306730:CDS |
| TTCTAATTTCAATACTATCA+TGG | 0.399674 | 8_4:+1661979 | Msa1306730:exon |
| AATTACCGACCCTTAATGAT+TGG | 0.403403 | 8_4:+1666269 | Msa1306730:CDS |
| CACCACATAACTTCCATATT+CGG | 0.407294 | 8_4:+1662056 | Msa1306730:CDS |
| TGGAATTGTATCATGGAAAG+TGG | 0.417984 | 8_4:+1668727 | Msa1306730:CDS |
| TGGTGTCTTTAGACCGGTTA+CGG | 0.418673 | 8_4:-1667755 | None:intergenic |
| ATGAGATCCTGTTTGGTAAG+AGG | 0.418851 | 8_4:-1662220 | None:intergenic |
| GTTGCTGAGGAAATGGGAAT+TGG | 0.427076 | 8_4:+1664417 | Msa1306730:CDS |
| CACGCACCTCCATTTATCCT+TGG | 0.429045 | 8_4:-1662269 | None:intergenic |
| ATCTCACAAGAGAGATAGCC+AGG | 0.430652 | 8_4:-1668895 | None:intergenic |
| TAACATTATTGGACTCAAAC+AGG | 0.431305 | 8_4:+1663845 | Msa1306730:CDS |
| AAAGTTCGTTCAAACAACTT+TGG | 0.433129 | 8_4:-1669036 | None:intergenic |
| AAGAAATATATCGACTGTAC+TGG | 0.433749 | 8_4:+1666041 | Msa1306730:CDS |
| CTTTCCAGGTTAGGCTAAAG+AGG | 0.433938 | 8_4:+1666423 | Msa1306730:intron |
| CATGCCTGTACGGTCCTTAT+CGG | 0.437607 | 8_4:-1665459 | None:intergenic |
| GTTCTGAAGCTGACATGATC+AGG | 0.438098 | 8_4:+1665135 | Msa1306730:CDS |
| GAAAGAGAAAGTGTTGGAAA+TGG | 0.445320 | 8_4:-1662089 | None:intergenic |
| TGCGTGAAGAAAAGAAGAAA+GGG | 0.453465 | 8_4:-1661908 | None:intergenic |
| TACTGAACCTCTTACCAAAC+AGG | 0.458876 | 8_4:+1662213 | Msa1306730:CDS |
| AAGAAGAGGCTTTAAGGAAT+CGG | 0.459020 | 8_4:+1667917 | Msa1306730:CDS |
| TTCTTTCACATTTCTGTGGG+AGG | 0.465939 | 8_4:+1668813 | Msa1306730:three_prime_UTR |
| ATGATTCTCCCAATCATTAA+GGG | 0.470462 | 8_4:-1666278 | None:intergenic |
| AGAAGAGGCTTTAAGGAATC+GGG | 0.474397 | 8_4:+1667918 | Msa1306730:CDS |
| AGTGTCCTTCCTTACTGTAA+AGG | 0.474800 | 8_4:+1661616 | Msa1306730:five_prime_UTR |
| AATTGAATTAGTCTCCAGTC+TGG | 0.479048 | 8_4:-1669073 | None:intergenic |
| ATAATCGATGAGATCCTGTT+TGG | 0.479852 | 8_4:-1662227 | None:intergenic |
| ATTACCGACCCTTAATGATT+GGG | 0.480585 | 8_4:+1666270 | Msa1306730:CDS |
| TTACTGTAGGACTTCTTGGC+AGG | 0.481332 | 8_4:+1666223 | Msa1306730:intron |
| AGAAAAGAAGAAAGGGGAAA+TGG | 0.485093 | 8_4:-1661901 | None:intergenic |
| AGCCCAAGAGAACCAACTTT+AGG | 0.487542 | 8_4:-1664952 | None:intergenic |
| TTTGACGAATTGCTATACTA+AGG | 0.490910 | 8_4:+1668771 | Msa1306730:CDS |
| AATGAATCTACGACCACCAC+TGG | 0.490920 | 8_4:-1662152 | None:intergenic |
| ATTGGGCTTTCCATCTGTGA+AGG | 0.493504 | 8_4:-1665300 | None:intergenic |
| CACAAACTCACCCAAAATGC+TGG | 0.496129 | 8_4:-1666500 | None:intergenic |
| CTCATACTAACAAACCCATT+GGG | 0.497890 | 8_4:-1665317 | None:intergenic |
| AGTATGAAGGAGTGAATCAA+AGG | 0.500845 | 8_4:+1661868 | Msa1306730:five_prime_UTR |
| TCACAGATGGAAAGCCCAAT+GGG | 0.501872 | 8_4:+1665303 | Msa1306730:CDS |
| TTCAGCAAACCATCTCGAAA+TGG | 0.502074 | 8_4:-1667775 | None:intergenic |
| TGAAGAGAAAGAGAAAGTGT+TGG | 0.505390 | 8_4:-1662095 | None:intergenic |
| ACAAACCTCGGGAAATATAG+TGG | 0.505786 | 8_4:-1666305 | None:intergenic |
| TATGTATCTACAGGATGGCT+TGG | 0.508849 | 8_4:+1667893 | Msa1306730:intron |
| GCTGAAGCATGTTGCTGAAG+AGG | 0.509896 | 8_4:+1667792 | Msa1306730:CDS |
| AATTCCAAAAGCCTCTCAGC+TGG | 0.510828 | 8_4:-1668711 | None:intergenic |
| CATTCTCTCTAATTCCAGAC+TGG | 0.512801 | 8_4:+1669059 | Msa1306730:three_prime_UTR |
| TTCCGAATATGGAAGTTATG+TGG | 0.513238 | 8_4:-1662058 | None:intergenic |
| GAGGTGCTGATGGAGGGCCT+TGG | 0.514200 | 8_4:+1666459 | Msa1306730:CDS |
| GTAGCTGAGGTGGTTAGAAC+AGG | 0.514281 | 8_4:+1667954 | Msa1306730:CDS |
| TTGGAGATGAGAGGTGCTGA+TGG | 0.515883 | 8_4:+1666449 | Msa1306730:CDS |
| GCAAATTCACCCTTCACAGA+TGG | 0.516671 | 8_4:+1665290 | Msa1306730:CDS |
| AAAGCTGTTGCTGAGGAAAT+GGG | 0.518116 | 8_4:+1664411 | Msa1306730:CDS |
| ATGTCTTTGCGTTCCCACTT+TGG | 0.523621 | 8_4:-1664462 | None:intergenic |
| CAAAAGGCAGCATGCCTGTA+CGG | 0.523924 | 8_4:-1665469 | None:intergenic |
| CTGATGGAGGGCCTTGGAGA+AGG | 0.524829 | 8_4:+1666465 | Msa1306730:CDS |
| ATGAAAGACTAACTTGATAG+AGG | 0.525706 | 8_4:-1664120 | None:intergenic |
| TTGCGTGAAGAAAAGAAGAA+AGG | 0.527283 | 8_4:-1661909 | None:intergenic |
| TTCCGATAGACAAAATACAT+TGG | 0.532084 | 8_4:-1666017 | None:intergenic |
| TTCTTACAGGCTGCAAAGCT+AGG | 0.533448 | 8_4:-1665172 | None:intergenic |
| CTGTACTGGAATGACCTTCA+GGG | 0.536065 | 8_4:+1666055 | Msa1306730:CDS |
| TGCTGAAGAGGTTCTAGAGC+TGG | 0.536393 | 8_4:+1667804 | Msa1306730:CDS |
| CAAATATCAGAATTGCTGAA+TGG | 0.537319 | 8_4:+1663780 | Msa1306730:CDS |
| GTAGGAACATCATCAAAGAA+AGG | 0.539005 | 8_4:+1661798 | Msa1306730:five_prime_UTR |
| TCGAAATGGTGTCTTTAGAC+CGG | 0.540053 | 8_4:-1667761 | None:intergenic |
| TGTTGCGTCGTGGCGTAGAG+AGG | 0.544825 | 8_4:-1662035 | None:intergenic |
| GGAAAAGTTACAAGGATGGA+TGG | 0.544870 | 8_4:+1661638 | Msa1306730:five_prime_UTR |
| AAACTCTGGCTATATAGTCC+TGG | 0.546182 | 8_4:+1668877 | Msa1306730:three_prime_UTR |
| CAGAGCATATCATTAGAGCC+AGG | 0.549413 | 8_4:+1664028 | Msa1306730:CDS |
| AAGAGAATCGTTACTTCCAG+TGG | 0.550025 | 8_4:+1662136 | Msa1306730:CDS |
| TTGGGCTTTCCATCTGTGAA+GGG | 0.550187 | 8_4:-1665299 | None:intergenic |
| GGAATTGTATCATGGAAAGT+GGG | 0.552480 | 8_4:+1668728 | Msa1306730:CDS |
| CTGTAAAGGGAAAAGTTACA+AGG | 0.553222 | 8_4:+1661630 | Msa1306730:five_prime_UTR |
| TCTCATACTAACAAACCCAT+TGG | 0.558109 | 8_4:-1665318 | None:intergenic |
| TAGAAGAAAGAGAAATGCTA+AGG | 0.561246 | 8_4:+1666776 | Msa1306730:CDS |
| TAGAATCGTGTGTAAAACTC+TGG | 0.561580 | 8_4:+1668863 | Msa1306730:three_prime_UTR |
| GTCGTGGCGTAGAGAGGGAG+AGG | 0.561838 | 8_4:-1662029 | None:intergenic |
| GGTAATTCACCAGGAATACA+AGG | 0.562503 | 8_4:-1666253 | None:intergenic |
| TTCACAGATGGAAAGCCCAA+TGG | 0.563301 | 8_4:+1665302 | Msa1306730:CDS |
| ATGGGTTTGTTAGTATGAGA+AGG | 0.567979 | 8_4:+1665321 | Msa1306730:CDS |
| TATTTGGACTGATACCGATA+AGG | 0.568294 | 8_4:+1665445 | Msa1306730:CDS |
| GTTGCGTCGTGGCGTAGAGA+GGG | 0.568562 | 8_4:-1662034 | None:intergenic |
| GCAACAACAGCATCTTCAGT+AGG | 0.569442 | 8_4:-1662190 | None:intergenic |
| ATAATAGCTACAAGAAGCAT+AGG | 0.571258 | 8_4:+1661776 | Msa1306730:five_prime_UTR |
| ATAGGTTAAAGCTGTTGCTG+AGG | 0.574248 | 8_4:+1664404 | Msa1306730:intron |
| CTAAAGACACCATTTCGAGA+TGG | 0.576781 | 8_4:+1667766 | Msa1306730:CDS |
| ATTTGACTGGGATAAAGTAA+TGG | 0.577539 | 8_4:+1663815 | Msa1306730:CDS |
| AGCTAGTATTTAATTCATGT+CGG | 0.579380 | 8_4:+1668979 | Msa1306730:three_prime_UTR |
| TCTAAATGCGGTAGCTGAGG+TGG | 0.582814 | 8_4:+1667944 | Msa1306730:CDS |
| CTAAGTTCAAACTGACCACC+TGG | 0.583250 | 8_4:-1664046 | None:intergenic |
| AAGTTACAAGGATGGATGGA+TGG | 0.584462 | 8_4:+1661642 | Msa1306730:five_prime_UTR |
| GACTGGGATAAAGTAATGGA+AGG | 0.584694 | 8_4:+1663819 | Msa1306730:CDS |
| TAGCTACAAGAAGCATAGGT+AGG | 0.587866 | 8_4:+1661780 | Msa1306730:five_prime_UTR |
| CGCTTCTGGTTGTAAAACCA+AGG | 0.589930 | 8_4:+1662252 | Msa1306730:CDS |
| CAGGATGGCTTGGAAAGAAG+AGG | 0.591818 | 8_4:+1667903 | Msa1306730:intron |
| AGTCTATTCAGAGAGTATGA+AGG | 0.593770 | 8_4:+1661855 | Msa1306730:five_prime_UTR |
| GTTCAGGACATGCACTGTAC+AGG | 0.593879 | 8_4:+1664984 | Msa1306730:CDS |
| ATGATCAGGAAATTTCGTGC+TGG | 0.595037 | 8_4:+1665149 | Msa1306730:CDS |
| GTGGCGTAGAGAGGGAGAGG+AGG | 0.597911 | 8_4:-1662026 | None:intergenic |
| AAAGGGAAAAGTTACAAGGA+TGG | 0.598233 | 8_4:+1661634 | Msa1306730:five_prime_UTR |
| TTAAGGGTCGGTAATTCACC+AGG | 0.604160 | 8_4:-1666262 | None:intergenic |
| AGAGAAAGTGTTGGAAATGG+TGG | 0.604482 | 8_4:-1662086 | None:intergenic |
| GAAAGTGTTGGAAATGGTGG+TGG | 0.607705 | 8_4:-1662083 | None:intergenic |
| GATTGGTTTCCAGCCAAAGT+GGG | 0.608140 | 8_4:+1664449 | Msa1306730:CDS |
| GTCTGATGCAGAGTTTCAAG+AGG | 0.610010 | 8_4:-1664076 | None:intergenic |
| CAGGTGTCACTCCAGCTGAG+AGG | 0.611225 | 8_4:+1668700 | Msa1306730:intron |
| GCGTGAAGAAAAGAAGAAAG+GGG | 0.611568 | 8_4:-1661907 | None:intergenic |
| ATTTCTAAATGCGGTAGCTG+AGG | 0.616025 | 8_4:+1667941 | Msa1306730:CDS |
| GGATTGGTTTCCAGCCAAAG+TGG | 0.618644 | 8_4:+1664448 | Msa1306730:CDS |
| ACAACAGCATCTTCAGTAGG+AGG | 0.620446 | 8_4:-1662187 | None:intergenic |
| CATTGCTGAGAGATTTGACT+GGG | 0.621451 | 8_4:+1663803 | Msa1306730:CDS |
| AGGATAGATGAGAACCCTGA+AGG | 0.624015 | 8_4:-1666069 | None:intergenic |
| GATACCGATAAGGACCGTAC+AGG | 0.624868 | 8_4:+1665455 | Msa1306730:CDS |
| GCATTGCTGAGAGATTTGAC+TGG | 0.627930 | 8_4:+1663802 | Msa1306730:CDS |
| TTCTCCCAATCATTAAGGGT+CGG | 0.628384 | 8_4:-1666274 | None:intergenic |
| GAGATGAGAGGTGCTGATGG+AGG | 0.629565 | 8_4:+1666452 | Msa1306730:CDS |
| CAAAGAAAGGAACTGAGTAA+CGG | 0.634079 | 8_4:+1661811 | Msa1306730:five_prime_UTR |
| AGATGAGAGGTGCTGATGGA+GGG | 0.638194 | 8_4:+1666453 | Msa1306730:CDS |
| AAGAGGTATTTGGAGATGAG+AGG | 0.640411 | 8_4:+1666440 | Msa1306730:CDS |
| GAACTGAGTAACGGAACAAG+CGG | 0.640513 | 8_4:+1661820 | Msa1306730:five_prime_UTR |
| AGACATACCTATGATGCCAA+AGG | 0.645310 | 8_4:+1664479 | Msa1306730:CDS |
| TCTGATGCAGAGTTTCAAGA+GGG | 0.645543 | 8_4:-1664075 | None:intergenic |
| AAAGCACATAACCTTCTCCA+AGG | 0.645896 | 8_4:-1666476 | None:intergenic |
| TTTGACCACTATATTTCCCG+AGG | 0.655534 | 8_4:+1666300 | Msa1306730:CDS |
| AGAATCGTTACTTCCAGTGG+TGG | 0.656440 | 8_4:+1662139 | Msa1306730:CDS |
| GGTAGGGATATTGTACGATG+AGG | 0.665122 | 8_4:+1666711 | Msa1306730:intron |
| GTAAAACCAAGGATAAATGG+AGG | 0.667037 | 8_4:+1662263 | Msa1306730:CDS |
| AGAGGTTCTAGAGCTGGCAA+AGG | 0.684570 | 8_4:+1667810 | Msa1306730:CDS |
| AGTTATGTGGTGTTGCGTCG+TGG | 0.686687 | 8_4:-1662045 | None:intergenic |
| GGAATCGGGATTTCTAAATG+CGG | 0.701354 | 8_4:+1667932 | Msa1306730:CDS |
| AGCATATCATTAGAGCCAGG+TGG | 0.733348 | 8_4:+1664031 | Msa1306730:CDS |
| CTGATGCAGAGTTTCAAGAG+GGG | 0.736237 | 8_4:-1664074 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAGAATAATAATAATAATTA+GGG | - | chr8_4:1661943-1661962 | None:intergenic | 10.0% |
| !! | AGAGAATAATAATAATAATT+AGG | - | chr8_4:1661944-1661963 | None:intergenic | 10.0% |
| !!! | TATGTGTTTAATATTTTTTA+TGG | + | chr8_4:1668674-1668693 | Msa1306730:intron | 10.0% |
| !!! | ATGCTAATTTTTTAATTGAA+AGG | + | chr8_4:1661729-1661748 | Msa1306730:five_prime_UTR | 15.0% |
| !!! | ATAAAAACATAGTGTATTTT+TGG | + | chr8_4:1663008-1663027 | Msa1306730:intron | 15.0% |
| !! | ACAAATCTATAAGAATTTAT+GGG | - | chr8_4:1663275-1663294 | None:intergenic | 15.0% |
| !!! | TAATATGTTATTTTTCCATT+AGG | + | chr8_4:1664166-1664185 | Msa1306730:intron | 15.0% |
| !!! | AATATGTTATTTTTCCATTA+GGG | + | chr8_4:1664167-1664186 | Msa1306730:intron | 15.0% |
| !!! | CTTTTGACATTATTATTTAT+AGG | + | chr8_4:1664386-1664405 | Msa1306730:intron | 15.0% |
| !!! | CTTTTATCCATTTTAAAAAT+AGG | - | chr8_4:1664585-1664604 | None:intergenic | 15.0% |
| !!! | TTTTAACTTTCAACAAAAAA+TGG | + | chr8_4:1664671-1664690 | Msa1306730:intron | 15.0% |
| !! | TTAATAAAGCAACATTAAAA+AGG | - | chr8_4:1665388-1665407 | None:intergenic | 15.0% |
| !!! | TTTTTAATGTTGCTTTATTA+AGG | + | chr8_4:1665387-1665406 | Msa1306730:intron | 15.0% |
| !!! | TGATTTTTTTTTTTTACTGT+AGG | + | chr8_4:1666210-1666229 | Msa1306730:intron | 15.0% |
| !!! | TATTAGTTTTACAATTTAAC+TGG | + | chr8_4:1666331-1666350 | Msa1306730:intron | 15.0% |
| !!! | TATTTCAATTTTTACTTGTT+AGG | + | chr8_4:1667150-1667169 | Msa1306730:intron | 15.0% |
| !!! | ATTTCAATTTTTACTTGTTA+GGG | + | chr8_4:1667151-1667170 | Msa1306730:intron | 15.0% |
| !!! | TTTTTTAAAAAAAAACAAGG+AGG | - | chr8_4:1667533-1667552 | None:intergenic | 15.0% |
| !! | ATTCATAATTTATATCTAGT+TGG | + | chr8_4:1668074-1668093 | Msa1306730:intron | 15.0% |
| !! | ATATATGTACTAACATAATA+TGG | - | chr8_4:1668254-1668273 | None:intergenic | 15.0% |
| !! | TTCTAATTTCAATACTATCA+TGG | + | chr8_4:1661979-1661998 | Msa1306730:exon | 20.0% |
| !! | CACTTTATATTTGTTTGATT+AGG | + | chr8_4:1662513-1662532 | Msa1306730:intron | 20.0% |
| !! | TTTATTAACTGATAGTAATG+AGG | - | chr8_4:1662993-1663012 | None:intergenic | 20.0% |
| !! | CACAAATCTATAAGAATTTA+TGG | - | chr8_4:1663276-1663295 | None:intergenic | 20.0% |
| !! | CAATAACTAATAGTATTACA+AGG | - | chr8_4:1663380-1663399 | None:intergenic | 20.0% |
| !! | AAATTATGACACAATATAAG+AGG | - | chr8_4:1663650-1663669 | None:intergenic | 20.0% |
| !!! | AACACAACCTATTTTTAAAA+TGG | + | chr8_4:1664575-1664594 | Msa1306730:intron | 20.0% |
| !! | TAATTGAATTGAGTTAGTTA+AGG | - | chr8_4:1664872-1664891 | None:intergenic | 20.0% |
| !!! | CTTTTCATAGTGTTTAAATT+AGG | - | chr8_4:1665053-1665072 | None:intergenic | 20.0% |
| !! | AAAATATCAATGTTTCTTAC+AGG | - | chr8_4:1665188-1665207 | None:intergenic | 20.0% |
| !! | ATATTGTTATCTCTTTCTTT+AGG | + | chr8_4:1665763-1665782 | Msa1306730:intron | 20.0% |
| !!! | TGTTACATCTTGTTTAAAAA+CGG | + | chr8_4:1665884-1665903 | Msa1306730:intron | 20.0% |
| !!! | TTTAAAAACGGTTTTATCAA+TGG | + | chr8_4:1665896-1665915 | Msa1306730:intron | 20.0% |
| !! | AAACTAATAAAAACAAACCT+CGG | - | chr8_4:1666320-1666339 | None:intergenic | 20.0% |
| !! | TAGTAAAATAACTACGAAAA+TGG | - | chr8_4:1666385-1666404 | None:intergenic | 20.0% |
| !! | AATGAAGAAAAAATATTGCA+AGG | - | chr8_4:1666815-1666834 | None:intergenic | 20.0% |
| !!! | TTGAAAGAAAAGCTATTTTT+GGG | - | chr8_4:1666879-1666898 | None:intergenic | 20.0% |
| !!! | ATTGAAAGAAAAGCTATTTT+TGG | - | chr8_4:1666880-1666899 | None:intergenic | 20.0% |
| !! | TTAATTTCAGAAATAGTCAT+TGG | + | chr8_4:1667365-1667384 | Msa1306730:intron | 20.0% |
| !! | TAATTTCAGAAATAGTCATT+GGG | + | chr8_4:1667366-1667385 | Msa1306730:intron | 20.0% |
| !!! | AGTTAACAATCACTTTTTAT+GGG | - | chr8_4:1667497-1667516 | None:intergenic | 20.0% |
| !!! | TAGTTAACAATCACTTTTTA+TGG | - | chr8_4:1667498-1667517 | None:intergenic | 20.0% |
| !!! | CGTTTGTTTTAGATTTTTTT+AGG | - | chr8_4:1667678-1667697 | None:intergenic | 20.0% |
| !! | AGAAATTTAGTATGGATAAT+GGG | - | chr8_4:1667703-1667722 | None:intergenic | 20.0% |
| !! | TAGAAATTTAGTATGGATAA+TGG | - | chr8_4:1667704-1667723 | None:intergenic | 20.0% |
| !! | ATCAGTATAGAAATTTAGTA+TGG | - | chr8_4:1667711-1667730 | None:intergenic | 20.0% |
| !! | TAAATTTCTATACTGATAAC+CGG | + | chr8_4:1667714-1667733 | Msa1306730:intron | 20.0% |
| !! | TAGTACATATATCTCTATAA+TGG | + | chr8_4:1668262-1668281 | Msa1306730:intron | 20.0% |
| !! | AGTACATATATCTCTATAAT+GGG | + | chr8_4:1668263-1668282 | Msa1306730:intron | 20.0% |
| !!! | GATCAAAGTTATTTTTTTCT+TGG | + | chr8_4:1668497-1668516 | Msa1306730:intron | 20.0% |
| !! | AAATTAACTAATGCAATCAT+TGG | + | chr8_4:1668616-1668635 | Msa1306730:intron | 20.0% |
| !! | AAATATTAAACACATACCAA+AGG | - | chr8_4:1668670-1668689 | None:intergenic | 20.0% |
| !!! | GTGTTTAATATTTTTTATGG+TGG | + | chr8_4:1668677-1668696 | Msa1306730:intron | 20.0% |
| !!! | AGAATATTGTTAGAAGTGTT+AGG | - | chr8_4:1663207-1663226 | None:intergenic | 25.0% |
| !!! | TGCTTTAGAAAATCAACAAA+TGG | - | chr8_4:1663455-1663474 | None:intergenic | 25.0% |
| !!! | TTCTAAAGCAACAAATGAAA+TGG | + | chr8_4:1663465-1663484 | Msa1306730:intron | 25.0% |
| !! | TCTAAAGCAACAAATGAAAT+GGG | + | chr8_4:1663466-1663485 | Msa1306730:intron | 25.0% |
| !!! | CATATAGTTTCTTTGAAGTA+TGG | + | chr8_4:1663613-1663632 | Msa1306730:intron | 25.0% |
| !! | TCCATTAGGGAAATAAATTT+TGG | + | chr8_4:1664180-1664199 | Msa1306730:intron | 25.0% |
| ! | TCCAAAATTTATTTCCCTAA+TGG | - | chr8_4:1664184-1664203 | None:intergenic | 25.0% |
| !! | AATCATAGATGGCTAAATTT+TGG | + | chr8_4:1664289-1664308 | Msa1306730:intron | 25.0% |
| ! | AAAAAATACATGCCTAAAGT+TGG | + | chr8_4:1664940-1664959 | Msa1306730:CDS | 25.0% |
| !!! | TGTTTCAGGTTTATGAAAAT+GGG | - | chr8_4:1665421-1665440 | None:intergenic | 25.0% |
| !! | TTTCTATGCCTTCTAATTTT+AGG | + | chr8_4:1665559-1665578 | Msa1306730:intron | 25.0% |
| ! | TCCTTCATATAAAGTGTATT+TGG | + | chr8_4:1665629-1665648 | Msa1306730:intron | 25.0% |
| ! | TCCAAATACACTTTATATGA+AGG | - | chr8_4:1665633-1665652 | None:intergenic | 25.0% |
| ! | TTGGAAATATACACATTGAA+TGG | + | chr8_4:1665648-1665667 | Msa1306730:intron | 25.0% |
| !! | TTCCAATGTATTTTGTCTAT+CGG | + | chr8_4:1666015-1666034 | Msa1306730:CDS | 25.0% |
| ! | AACTAATAAAAACAAACCTC+GGG | - | chr8_4:1666319-1666338 | None:intergenic | 25.0% |
| ! | AAGCTGAAAAAATTATGAAG+TGG | + | chr8_4:1667124-1667143 | Msa1306730:intron | 25.0% |
| !! | GATAAATATGATTTGAAACC+TGG | + | chr8_4:1667190-1667209 | Msa1306730:intron | 25.0% |
| ! | AATTTCAGAAATAGTCATTG+GGG | + | chr8_4:1667367-1667386 | Msa1306730:intron | 25.0% |
| !!! | CTCTAAAATGAAAAGCTATT+AGG | - | chr8_4:1667577-1667596 | None:intergenic | 25.0% |
| !! | TGTCATTTAAGTGTTTGTTT+AGG | - | chr8_4:1667638-1667657 | None:intergenic | 25.0% |
| ! | GTACATATATCTCTATAATG+GGG | + | chr8_4:1668264-1668283 | Msa1306730:intron | 25.0% |
| ! | TATATGTACTATTAAGAGTC+CGG | - | chr8_4:1668292-1668311 | None:intergenic | 25.0% |
| ! | ATGCTATAATATTTGAGAGT+TGG | + | chr8_4:1668535-1668554 | Msa1306730:intron | 25.0% |
| !!! | TTAATATTTTTTATGGTGGC+AGG | + | chr8_4:1668681-1668700 | Msa1306730:intron | 25.0% |
| !!! | ATCTGATGTATTTTTTTGCT+TGG | + | chr8_4:1668940-1668959 | Msa1306730:three_prime_UTR | 25.0% |
| ! | AGCTAGTATTTAATTCATGT+CGG | + | chr8_4:1668979-1668998 | Msa1306730:three_prime_UTR | 25.0% |
| ! | TAACTTTTCCCTTTACAGTA+AGG | - | chr8_4:1661628-1661647 | None:intergenic | 30.0% |
| AAGTGAATGAAAAAGAGAAG+TGG | + | chr8_4:1661681-1661700 | Msa1306730:five_prime_UTR | 30.0% | |
| ! | ATAATAGCTACAAGAAGCAT+AGG | + | chr8_4:1661776-1661795 | Msa1306730:five_prime_UTR | 30.0% |
| GTTGTAAAACCAAGGATAAA+TGG | + | chr8_4:1662260-1662279 | Msa1306730:CDS | 30.0% | |
| AGTCTCAGAAGAATATCATT+AGG | + | chr8_4:1662607-1662626 | Msa1306730:intron | 30.0% | |
| !!! | ATAGTGTATTTTTGGTTCTG+CGG | + | chr8_4:1663016-1663035 | Msa1306730:intron | 30.0% |
| TTAAAAAACAGCGCTTCAAA+CGG | + | chr8_4:1663326-1663345 | Msa1306730:intron | 30.0% | |
| ATCTTTGTCGCATTTATCAA+TGG | + | chr8_4:1663405-1663424 | Msa1306730:intron | 30.0% | |
| ! | ACTTTTATCCATCACTTCAA+AGG | - | chr8_4:1663503-1663522 | None:intergenic | 30.0% |
| !! | TTTGAAGTGATGGATAAAAG+TGG | + | chr8_4:1663502-1663521 | Msa1306730:intron | 30.0% |
| ! | AATTTGTTTGTCTTCTCTTC+AGG | + | chr8_4:1663665-1663684 | Msa1306730:intron | 30.0% |
| GATATTTGCTCATACTTCAT+AGG | - | chr8_4:1663768-1663787 | None:intergenic | 30.0% | |
| CAAATATCAGAATTGCTGAA+TGG | + | chr8_4:1663780-1663799 | Msa1306730:CDS | 30.0% | |
| ATTTGACTGGGATAAAGTAA+TGG | + | chr8_4:1663815-1663834 | Msa1306730:CDS | 30.0% | |
| ATGGAAGGTGATAACATTAT+TGG | + | chr8_4:1663834-1663853 | Msa1306730:CDS | 30.0% | |
| TAACATTATTGGACTCAAAC+AGG | + | chr8_4:1663845-1663864 | Msa1306730:CDS | 30.0% | |
| ATGAAAGACTAACTTGATAG+AGG | - | chr8_4:1664123-1664142 | None:intergenic | 30.0% | |
| CAGATCTGAAAGAAATATCT+TGG | - | chr8_4:1664356-1664375 | None:intergenic | 30.0% | |
| ! | GAAATGGGAATTGGATTTTT+GGG | + | chr8_4:1664426-1664445 | Msa1306730:CDS | 30.0% |
| ! | AAATGGGAATTGGATTTTTG+GGG | + | chr8_4:1664427-1664446 | Msa1306730:CDS | 30.0% |
| AGTTCAAGGACTTAAAAATG+AGG | - | chr8_4:1664519-1664538 | None:intergenic | 30.0% | |
| AACTATTTAATCCTGATGTC+AGG | - | chr8_4:1664650-1664669 | None:intergenic | 30.0% | |
| GCTCAAATGTTACTAAGAAA+AGG | - | chr8_4:1664772-1664791 | None:intergenic | 30.0% | |
| GTCATTGTTAAGTTACTAAG+TGG | - | chr8_4:1664833-1664852 | None:intergenic | 30.0% | |
| ACTATGAAAAGAATATCGTC+TGG | + | chr8_4:1665062-1665081 | Msa1306730:intron | 30.0% | |
| !! | CTGTTTCAGGTTTATGAAAA+TGG | - | chr8_4:1665422-1665441 | None:intergenic | 30.0% |
| AAGGAGTCATCAAAAACAAA+AGG | - | chr8_4:1665488-1665507 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTTGATGACTCCTT+CGG | + | chr8_4:1665488-1665507 | Msa1306730:CDS | 30.0% |
| AAAAAAAATCACTTACCCGA+AGG | - | chr8_4:1665507-1665526 | None:intergenic | 30.0% | |
| AATATACACATTGAATGGCT+AGG | + | chr8_4:1665653-1665672 | Msa1306730:intron | 30.0% | |
| GAGTTCGAAAACAAAATAAG+TGG | - | chr8_4:1665953-1665972 | None:intergenic | 30.0% | |
| TTCCGATAGACAAAATACAT+TGG | - | chr8_4:1666020-1666039 | None:intergenic | 30.0% | |
| ! | AAGAAATATATCGACTGTAC+TGG | + | chr8_4:1666041-1666060 | Msa1306730:CDS | 30.0% |
| CTAAGATGACACGAATATTA+AGG | - | chr8_4:1666092-1666111 | None:intergenic | 30.0% | |
| CTTAATATTCGTGTCATCTT+AGG | + | chr8_4:1666090-1666109 | Msa1306730:intron | 30.0% | |
| !!! | TTTTTTACTGTAGGACTTCT+TGG | + | chr8_4:1666219-1666238 | Msa1306730:intron | 30.0% |
| ATGATTCTCCCAATCATTAA+GGG | - | chr8_4:1666281-1666300 | None:intergenic | 30.0% | |
| AATGATTCTCCCAATCATTA+AGG | - | chr8_4:1666282-1666301 | None:intergenic | 30.0% | |
| ACTTAAACATTACTCTTTCC+AGG | + | chr8_4:1666409-1666428 | Msa1306730:intron | 30.0% | |
| TATGTTATGTGACTTTCTCA+AGG | - | chr8_4:1666551-1666570 | None:intergenic | 30.0% | |
| AGTCACATAACATATTCGAA+AGG | + | chr8_4:1666557-1666576 | Msa1306730:intron | 30.0% | |
| ATAGAAGAACATGCAAAGAA+GGG | - | chr8_4:1666638-1666657 | None:intergenic | 30.0% | |
| TAGAAGAAAGAGAAATGCTA+AGG | + | chr8_4:1666776-1666795 | Msa1306730:CDS | 30.0% | |
| AAGAGAAATGCTAAGGAATA+AGG | + | chr8_4:1666783-1666802 | Msa1306730:CDS | 30.0% | |
| !! | AGAAATGGATTTTGCATGAA+GGG | - | chr8_4:1666919-1666938 | None:intergenic | 30.0% |
| !! | TAGAAATGGATTTTGCATGA+AGG | - | chr8_4:1666920-1666939 | None:intergenic | 30.0% |
| AAGATTTAATTGCAGAAAGC+TGG | - | chr8_4:1666963-1666982 | None:intergenic | 30.0% | |
| TACTAGAAAAAGGATAACTG+AGG | + | chr8_4:1667046-1667065 | Msa1306730:intron | 30.0% | |
| GGATAAACACTTGATCAAAA+TGG | + | chr8_4:1667067-1667086 | Msa1306730:intron | 30.0% | |
| ! | AATATGATTTGAAACCTGGA+TGG | + | chr8_4:1667194-1667213 | Msa1306730:intron | 30.0% |
| TTTAACTGAGCCATGAAATA+GGG | - | chr8_4:1668047-1668066 | None:intergenic | 30.0% | |
| ATTTAACTGAGCCATGAAAT+AGG | - | chr8_4:1668048-1668067 | None:intergenic | 30.0% | |
| ATAATCACTAGAAGTTAGCT+TGG | - | chr8_4:1668210-1668229 | None:intergenic | 30.0% | |
| ! | AACTCTTCACAATTTTGCAT+TGG | - | chr8_4:1668390-1668409 | None:intergenic | 30.0% |
| ! | CTTATAACGTTGAGATTTTG+TGG | + | chr8_4:1668464-1668483 | Msa1306730:intron | 30.0% |
| !! | TGAGATTTTGTGGTTGATTT+AGG | + | chr8_4:1668474-1668493 | Msa1306730:intron | 30.0% |
| !! | GAGATTTTGTGGTTGATTTA+GGG | + | chr8_4:1668475-1668494 | Msa1306730:intron | 30.0% |
| ATTCTACCACAAGTTTATGA+AGG | - | chr8_4:1668594-1668613 | None:intergenic | 30.0% | |
| !! | GAAGTTTTATCTGTTTCCTT+TGG | + | chr8_4:1668651-1668670 | Msa1306730:intron | 30.0% |
| TTTGACGAATTGCTATACTA+AGG | + | chr8_4:1668771-1668790 | Msa1306730:CDS | 30.0% | |
| TTGCTATACTAAGGTGTATT+CGG | + | chr8_4:1668780-1668799 | Msa1306730:exon | 30.0% | |
| ! | CTTTTCTTTCACATTTCTGT+GGG | + | chr8_4:1668810-1668829 | Msa1306730:three_prime_UTR | 30.0% |
| !!! | ATTGTATAAGCCACCTTTTT+TGG | + | chr8_4:1668839-1668858 | Msa1306730:three_prime_UTR | 30.0% |
| !!! | TTGTATAAGCCACCTTTTTT+GGG | + | chr8_4:1668840-1668859 | Msa1306730:three_prime_UTR | 30.0% |
| AAAGTTCGTTCAAACAACTT+TGG | - | chr8_4:1669039-1669058 | None:intergenic | 30.0% | |
| ! | TTTTCCCTTTACAGTAAGGA+AGG | - | chr8_4:1661624-1661643 | None:intergenic | 35.0% |
| CTGTAAAGGGAAAAGTTACA+AGG | + | chr8_4:1661630-1661649 | Msa1306730:five_prime_UTR | 35.0% | |
| AAAGGGAAAAGTTACAAGGA+TGG | + | chr8_4:1661634-1661653 | Msa1306730:five_prime_UTR | 35.0% | |
| GTAGGAACATCATCAAAGAA+AGG | + | chr8_4:1661798-1661817 | Msa1306730:five_prime_UTR | 35.0% | |
| CAAAGAAAGGAACTGAGTAA+CGG | + | chr8_4:1661811-1661830 | Msa1306730:five_prime_UTR | 35.0% | |
| ! | AGTCTATTCAGAGAGTATGA+AGG | + | chr8_4:1661855-1661874 | Msa1306730:five_prime_UTR | 35.0% |
| AGTATGAAGGAGTGAATCAA+AGG | + | chr8_4:1661868-1661887 | Msa1306730:five_prime_UTR | 35.0% | |
| AGAAAAGAAGAAAGGGGAAA+TGG | - | chr8_4:1661904-1661923 | None:intergenic | 35.0% | |
| TGCGTGAAGAAAAGAAGAAA+GGG | - | chr8_4:1661911-1661930 | None:intergenic | 35.0% | |
| TTGCGTGAAGAAAAGAAGAA+AGG | - | chr8_4:1661912-1661931 | None:intergenic | 35.0% | |
| CACCACATAACTTCCATATT+CGG | + | chr8_4:1662056-1662075 | Msa1306730:CDS | 35.0% | |
| TTCCGAATATGGAAGTTATG+TGG | - | chr8_4:1662061-1662080 | None:intergenic | 35.0% | |
| !! | GAAAGAGAAAGTGTTGGAAA+TGG | - | chr8_4:1662092-1662111 | None:intergenic | 35.0% |
| ! | TGAAGAGAAAGAGAAAGTGT+TGG | - | chr8_4:1662098-1662117 | None:intergenic | 35.0% |
| ATAATCGATGAGATCCTGTT+TGG | - | chr8_4:1662230-1662249 | None:intergenic | 35.0% | |
| GTAAAACCAAGGATAAATGG+AGG | + | chr8_4:1662263-1662282 | Msa1306730:CDS | 35.0% | |
| GTGACAGATACAAGAAATCA+AGG | - | chr8_4:1662496-1662515 | None:intergenic | 35.0% | |
| ! | TCGTATATTTAGCTCAGCTA+GGG | - | chr8_4:1663164-1663183 | None:intergenic | 35.0% |
| !! | AATGTACTCCTTTGAAGTGA+TGG | + | chr8_4:1663492-1663511 | Msa1306730:intron | 35.0% |
| GATGGATAAAAGTGGTTAGA+TGG | + | chr8_4:1663510-1663529 | Msa1306730:intron | 35.0% | |
| TTAGATGGAACATCTTCCTA+GGG | + | chr8_4:1663525-1663544 | Msa1306730:intron | 35.0% | |
| TTCATGTTCTCTTGCAGAAT+AGG | + | chr8_4:1663699-1663718 | Msa1306730:intron | 35.0% | |
| ! | GGTACTGAACATGAAAAGTT+TGG | + | chr8_4:1663720-1663739 | Msa1306730:CDS | 35.0% |
| !!! | GAAAAGTTTGGTTTTGAGCT+TGG | + | chr8_4:1663732-1663751 | Msa1306730:CDS | 35.0% |
| CTTTGTGATTCAGCATTCAT+TGG | + | chr8_4:1663938-1663957 | Msa1306730:intron | 35.0% | |
| !! | CTGAGTTCTGAAATCATAGA+TGG | + | chr8_4:1664278-1664297 | Msa1306730:intron | 35.0% |
| ! | GGAAATGGGAATTGGATTTT+TGG | + | chr8_4:1664425-1664444 | Msa1306730:CDS | 35.0% |
| AAAACTACCTTTGGCATCAT+AGG | - | chr8_4:1664489-1664508 | None:intergenic | 35.0% | |
| GGAGAAAGAAAAACTACCTT+TGG | - | chr8_4:1664498-1664517 | None:intergenic | 35.0% | |
| AGATATGCTCAATCAGTTCA+AGG | - | chr8_4:1664533-1664552 | None:intergenic | 35.0% | |
| ACAATAATCTCAAGTCACTG+TGG | - | chr8_4:1664737-1664756 | None:intergenic | 35.0% | |
| TTAGTAACATTTGAGCTCCA+TGG | + | chr8_4:1664776-1664795 | Msa1306730:intron | 35.0% | |
| TAGTAACATTTGAGCTCCAT+GGG | + | chr8_4:1664777-1664796 | Msa1306730:intron | 35.0% | |
| CGTGTTTATACAGGTAAATC+TGG | + | chr8_4:1665106-1665125 | Msa1306730:intron | 35.0% | |
| CTCATACTAACAAACCCATT+GGG | - | chr8_4:1665320-1665339 | None:intergenic | 35.0% | |
| TCTCATACTAACAAACCCAT+TGG | - | chr8_4:1665321-1665340 | None:intergenic | 35.0% | |
| !! | ATGGGTTTGTTAGTATGAGA+AGG | + | chr8_4:1665321-1665340 | Msa1306730:CDS | 35.0% |
| ! | TGTTAGTATGAGAAGGTACA+TGG | + | chr8_4:1665328-1665347 | Msa1306730:intron | 35.0% |
| AGGTTTATGAAAATGGGACA+AGG | - | chr8_4:1665415-1665434 | None:intergenic | 35.0% | |
| AAACCTGAAACAGCCATATT+TGG | + | chr8_4:1665429-1665448 | Msa1306730:intron | 35.0% | |
| TATCGGTATCAGTCCAAATA+TGG | - | chr8_4:1665445-1665464 | None:intergenic | 35.0% | |
| TATTTGGACTGATACCGATA+AGG | + | chr8_4:1665445-1665464 | Msa1306730:CDS | 35.0% | |
| !!! | TTGTTTTTGATGACTCCTTC+GGG | + | chr8_4:1665489-1665508 | Msa1306730:CDS | 35.0% |
| ! | CTTCTAATTTTAGGCTTCGT+GGG | + | chr8_4:1665568-1665587 | Msa1306730:intron | 35.0% |
| TGGTGTTTCATGCAATGATT+TGG | + | chr8_4:1665916-1665935 | Msa1306730:intron | 35.0% | |
| TTCACGATGAAGAATGACAA+GGG | - | chr8_4:1666133-1666152 | None:intergenic | 35.0% | |
| TTTCACGATGAAGAATGACA+AGG | - | chr8_4:1666134-1666153 | None:intergenic | 35.0% | |
| AATTACCGACCCTTAATGAT+TGG | + | chr8_4:1666269-1666288 | Msa1306730:CDS | 35.0% | |
| ATTACCGACCCTTAATGATT+GGG | + | chr8_4:1666270-1666289 | Msa1306730:CDS | 35.0% | |
| AACATTACTCTTTCCAGGTT+AGG | + | chr8_4:1666414-1666433 | Msa1306730:intron | 35.0% | |
| ! | TATGTGCTTTACCAGCATTT+TGG | + | chr8_4:1666489-1666508 | Msa1306730:CDS | 35.0% |
| ! | ATGTGCTTTACCAGCATTTT+GGG | + | chr8_4:1666490-1666509 | Msa1306730:CDS | 35.0% |
| CATAGAAGAACATGCAAAGA+AGG | - | chr8_4:1666639-1666658 | None:intergenic | 35.0% | |
| ! | TTTTGGATATGACAGCAGAT+TGG | + | chr8_4:1666749-1666768 | Msa1306730:CDS | 35.0% |
| !! | GAAATGGATTTTGCATGAAG+GGG | - | chr8_4:1666918-1666937 | None:intergenic | 35.0% |
| ATCCATTTCTACTTGAAGCA+TGG | + | chr8_4:1666929-1666948 | Msa1306730:intron | 35.0% | |
| TCCATTTCTACTTGAAGCAT+GGG | + | chr8_4:1666930-1666949 | Msa1306730:intron | 35.0% | |
| !! | AAATGGATTTTGCATGAAGG+GGG | - | chr8_4:1666917-1666936 | None:intergenic | 35.0% |
| !! | CAAATGGATTTTGCATGAAG+GGG | - | chr8_4:1666993-1667012 | None:intergenic | 35.0% |
| !! | CCAAATGGATTTTGCATGAA+GGG | - | chr8_4:1666994-1667013 | None:intergenic | 35.0% |
| CCTTCATGCAAAATCCATTT+GGG | + | chr8_4:1666917-1666936 | Msa1306730:intron | 35.0% | |
| !! | CTTTTTCTAGTACAGAAAGC+TGG | - | chr8_4:1667038-1667057 | None:intergenic | 35.0% |
| CAGCTTTCTGTACTAGAAAA+AGG | + | chr8_4:1667036-1667055 | Msa1306730:intron | 35.0% | |
| AGCTAACTTAAGTTCTCAGA+CGG | - | chr8_4:1667101-1667120 | None:intergenic | 35.0% | |
| !! | ATGGATTGGTATGTATCTAC+AGG | + | chr8_4:1667884-1667903 | Msa1306730:intron | 35.0% |
| ATTGGTATGTATCTACAGGA+TGG | + | chr8_4:1667888-1667907 | Msa1306730:intron | 35.0% | |
| !! | AAGAAGAGGCTTTAAGGAAT+CGG | + | chr8_4:1667917-1667936 | Msa1306730:CDS | 35.0% |
| ACAGCCTCTAACTAAAACAA+GGG | - | chr8_4:1668100-1668119 | None:intergenic | 35.0% | |
| AACAGCCTCTAACTAAAACA+AGG | - | chr8_4:1668101-1668120 | None:intergenic | 35.0% | |
| ! | ATATCTCTATAATGGGGTAC+CGG | + | chr8_4:1668270-1668289 | Msa1306730:intron | 35.0% |
| !! | TATTTGAGAGTTGGTATCCA+TGG | + | chr8_4:1668544-1668563 | Msa1306730:intron | 35.0% |
| ATGTTAAGCTTGAAAGTCCA+TGG | - | chr8_4:1668564-1668583 | None:intergenic | 35.0% | |
| !!! | AGGCTTTTGGAATTGTATCA+TGG | + | chr8_4:1668720-1668739 | Msa1306730:CDS | 35.0% |
| TGGAATTGTATCATGGAAAG+TGG | + | chr8_4:1668727-1668746 | Msa1306730:CDS | 35.0% | |
| GGAATTGTATCATGGAAAGT+GGG | + | chr8_4:1668728-1668747 | Msa1306730:CDS | 35.0% | |
| ! | GCTTTTCTTTCACATTTCTG+TGG | + | chr8_4:1668809-1668828 | Msa1306730:three_prime_UTR | 35.0% |
| TAGAATCGTGTGTAAAACTC+TGG | + | chr8_4:1668863-1668882 | Msa1306730:three_prime_UTR | 35.0% | |
| AGTGTCCTTCCTTACTGTAA+AGG | + | chr8_4:1661616-1661635 | Msa1306730:five_prime_UTR | 40.0% | |
| GTGTCCTTCCTTACTGTAAA+GGG | + | chr8_4:1661617-1661636 | Msa1306730:five_prime_UTR | 40.0% | |
| GGAAAAGTTACAAGGATGGA+TGG | + | chr8_4:1661638-1661657 | Msa1306730:five_prime_UTR | 40.0% | |
| AAGTTACAAGGATGGATGGA+TGG | + | chr8_4:1661642-1661661 | Msa1306730:five_prime_UTR | 40.0% | |
| ! | TAGCTACAAGAAGCATAGGT+AGG | + | chr8_4:1661780-1661799 | Msa1306730:five_prime_UTR | 40.0% |
| GCGTGAAGAAAAGAAGAAAG+GGG | - | chr8_4:1661910-1661929 | None:intergenic | 40.0% | |
| !! | AGAGAAAGTGTTGGAAATGG+TGG | - | chr8_4:1662089-1662108 | None:intergenic | 40.0% |
| AAGAGAATCGTTACTTCCAG+TGG | + | chr8_4:1662136-1662155 | Msa1306730:CDS | 40.0% | |
| TACTGAACCTCTTACCAAAC+AGG | + | chr8_4:1662213-1662232 | Msa1306730:CDS | 40.0% | |
| ATGAGATCCTGTTTGGTAAG+AGG | - | chr8_4:1662223-1662242 | None:intergenic | 40.0% | |
| TCGAATATGTAGCGCAACTT+AGG | + | chr8_4:1662762-1662781 | Msa1306730:intron | 40.0% | |
| TCGAATATGTAGCGCAACTT+AGG | + | chr8_4:1662762-1662781 | Msa1306730:intron | 40.0% | |
| ACGTGAGTTTCATGTCAACA+TGG | + | chr8_4:1662912-1662931 | Msa1306730:intron | 40.0% | |
| TCAAATATGTAGCTCAGCTC+AGG | + | chr8_4:1663095-1663114 | Msa1306730:intron | 40.0% | |
| ! | GTCGTATATTTAGCTCAGCT+AGG | - | chr8_4:1663165-1663184 | None:intergenic | 40.0% |
| GTCGCATTTATCAATGGTGA+TGG | + | chr8_4:1663411-1663430 | Msa1306730:intron | 40.0% | |
| GTTAGATGGAACATCTTCCT+AGG | + | chr8_4:1663524-1663543 | Msa1306730:intron | 40.0% | |
| AAAAGTGAACGCAAAACCCT+AGG | - | chr8_4:1663544-1663563 | None:intergenic | 40.0% | |
| !! | TTTTGCGTTCACTTTTCACG+AGG | + | chr8_4:1663548-1663567 | Msa1306730:intron | 40.0% |
| CATTGCTGAGAGATTTGACT+GGG | + | chr8_4:1663803-1663822 | Msa1306730:CDS | 40.0% | |
| ! | GACTGGGATAAAGTAATGGA+AGG | + | chr8_4:1663819-1663838 | Msa1306730:CDS | 40.0% |
| TTGGATTGCCATGCTATTGT+TGG | + | chr8_4:1663957-1663976 | Msa1306730:intron | 40.0% | |
| TTGACTCTCCAACAATAGCA+TGG | - | chr8_4:1663968-1663987 | None:intergenic | 40.0% | |
| TCTGATGCAGAGTTTCAAGA+GGG | - | chr8_4:1664078-1664097 | None:intergenic | 40.0% | |
| ATAGGTTAAAGCTGTTGCTG+AGG | + | chr8_4:1664404-1664423 | Msa1306730:intron | 40.0% | |
| TAAAGCTGTTGCTGAGGAAA+TGG | + | chr8_4:1664410-1664429 | Msa1306730:CDS | 40.0% | |
| AAAGCTGTTGCTGAGGAAAT+GGG | + | chr8_4:1664411-1664430 | Msa1306730:CDS | 40.0% | |
| !! | GGAATTGGATTTTTGGGGAT+TGG | + | chr8_4:1664432-1664451 | Msa1306730:CDS | 40.0% |
| AGACATACCTATGATGCCAA+AGG | + | chr8_4:1664479-1664498 | Msa1306730:CDS | 40.0% | |
| ACTGATTGAGCATATCTGCA+TGG | + | chr8_4:1664536-1664555 | Msa1306730:intron | 40.0% | |
| GGATAAAAGCCCTCTGTTTA+TGG | + | chr8_4:1664596-1664615 | Msa1306730:intron | 40.0% | |
| ACCAATGGACCATAAACAGA+GGG | - | chr8_4:1664608-1664627 | None:intergenic | 40.0% | |
| AATTCCACATGTCATTCCCA+TGG | - | chr8_4:1664796-1664815 | None:intergenic | 40.0% | |
| TGGGAATGACATGTGGAATT+TGG | + | chr8_4:1664796-1664815 | Msa1306730:intron | 40.0% | |
| ! | TACTGTCCGTCTTTTTGTTG+TGG | + | chr8_4:1664894-1664913 | Msa1306730:intron | 40.0% |
| ! | ATGCCTAAAGTTGGTTCTCT+TGG | + | chr8_4:1664949-1664968 | Msa1306730:CDS | 40.0% |
| ! | TGCCTAAAGTTGGTTCTCTT+GGG | + | chr8_4:1664950-1664969 | Msa1306730:CDS | 40.0% |
| ATCAGCTCTCGTGTTTATAC+AGG | + | chr8_4:1665097-1665116 | Msa1306730:intron | 40.0% | |
| ATGATCAGGAAATTTCGTGC+TGG | + | chr8_4:1665149-1665168 | Msa1306730:CDS | 40.0% | |
| ! | AGTCCAAATATGGCTGTTTC+AGG | - | chr8_4:1665435-1665454 | None:intergenic | 40.0% |
| CCACGAAGCCTAAAATTAGA+AGG | - | chr8_4:1665570-1665589 | None:intergenic | 40.0% | |
| ! | CCTTCTAATTTTAGGCTTCG+TGG | + | chr8_4:1665567-1665586 | Msa1306730:intron | 40.0% |
| GGTAATTCACCAGGAATACA+AGG | - | chr8_4:1666256-1666275 | None:intergenic | 40.0% | |
| TTCTCCCAATCATTAAGGGT+CGG | - | chr8_4:1666277-1666296 | None:intergenic | 40.0% | |
| TTTGACCACTATATTTCCCG+AGG | + | chr8_4:1666300-1666319 | Msa1306730:CDS | 40.0% | |
| ACAAACCTCGGGAAATATAG+TGG | - | chr8_4:1666308-1666327 | None:intergenic | 40.0% | |
| AATACCTCTTTAGCCTAACC+TGG | - | chr8_4:1666430-1666449 | None:intergenic | 40.0% | |
| !! | GGTTAGGCTAAAGAGGTATT+TGG | + | chr8_4:1666430-1666449 | Msa1306730:intron | 40.0% |
| !! | AAGAGGTATTTGGAGATGAG+AGG | + | chr8_4:1666440-1666459 | Msa1306730:CDS | 40.0% |
| AAAGCACATAACCTTCTCCA+AGG | - | chr8_4:1666479-1666498 | None:intergenic | 40.0% | |
| ATAATGTTCCTGATTGTGCC+AGG | + | chr8_4:1666690-1666709 | Msa1306730:intron | 40.0% | |
| ! | GGTTTCTTTGCAACGTGTTT+TGG | + | chr8_4:1666732-1666751 | Msa1306730:CDS | 40.0% |
| CCTAGCTTACTTATGCTTCT+GGG | - | chr8_4:1666850-1666869 | None:intergenic | 40.0% | |
| ACCTAGCTTACTTATGCTTC+TGG | - | chr8_4:1666851-1666870 | None:intergenic | 40.0% | |
| CCCTTCATGCAAAATCCATT+TGG | + | chr8_4:1666916-1666935 | Msa1306730:intron | 40.0% | |
| !! | CCCAAATGGATTTTGCATGA+AGG | - | chr8_4:1666995-1667014 | None:intergenic | 40.0% |
| TTAGGGTCTTGAGTTTCAGA+CGG | + | chr8_4:1667168-1667187 | Msa1306730:intron | 40.0% | |
| GGAGAGATATGTTCCTTCTT+TGG | + | chr8_4:1667215-1667234 | Msa1306730:intron | 40.0% | |
| AGAGAGAGAGAATCCAAAGA+AGG | - | chr8_4:1667231-1667250 | None:intergenic | 40.0% | |
| TACGTACGTACGTACATACT+CGG | + | chr8_4:1667307-1667326 | Msa1306730:intron | 40.0% | |
| TCGAAATGGTGTCTTTAGAC+CGG | - | chr8_4:1667764-1667783 | None:intergenic | 40.0% | |
| CTAAAGACACCATTTCGAGA+TGG | + | chr8_4:1667766-1667785 | Msa1306730:CDS | 40.0% | |
| TTCAGCAAACCATCTCGAAA+TGG | - | chr8_4:1667778-1667797 | None:intergenic | 40.0% | |
| CATGCTCTTAGCAACATTGA+TGG | - | chr8_4:1667867-1667886 | None:intergenic | 40.0% | |
| CATCAATGTTGCTAAGAGCA+TGG | + | chr8_4:1667865-1667884 | Msa1306730:intron | 40.0% | |
| ! | ATGTTGCTAAGAGCATGGAT+TGG | + | chr8_4:1667870-1667889 | Msa1306730:intron | 40.0% |
| TATGTATCTACAGGATGGCT+TGG | + | chr8_4:1667893-1667912 | Msa1306730:intron | 40.0% | |
| CTTGGAAAGAAGAGGCTTTA+AGG | + | chr8_4:1667911-1667930 | Msa1306730:CDS | 40.0% | |
| !! | AGAAGAGGCTTTAAGGAATC+GGG | + | chr8_4:1667918-1667937 | Msa1306730:CDS | 40.0% |
| GGAATCGGGATTTCTAAATG+CGG | + | chr8_4:1667932-1667951 | Msa1306730:CDS | 40.0% | |
| ATTTCTAAATGCGGTAGCTG+AGG | + | chr8_4:1667941-1667960 | Msa1306730:CDS | 40.0% | |
| CTGAAGCATGGCACAAAAAA+TGG | - | chr8_4:1668020-1668039 | None:intergenic | 40.0% | |
| ! | TTTTTGTGCCATGCTTCAGA+TGG | + | chr8_4:1668021-1668040 | Msa1306730:intron | 40.0% |
| !!! | TTGGCCCTTGTTTTAGTTAG+AGG | + | chr8_4:1668093-1668112 | Msa1306730:intron | 40.0% |
| CTTGCACCTTCATAAACTTG+TGG | + | chr8_4:1668585-1668604 | Msa1306730:intron | 40.0% | |
| TTCTTTCACATTTCTGTGGG+AGG | + | chr8_4:1668813-1668832 | Msa1306730:three_prime_UTR | 40.0% | |
| ACGATTCTACCCAAAAAAGG+TGG | - | chr8_4:1668852-1668871 | None:intergenic | 40.0% | |
| CACACGATTCTACCCAAAAA+AGG | - | chr8_4:1668855-1668874 | None:intergenic | 40.0% | |
| AAACTCTGGCTATATAGTCC+TGG | + | chr8_4:1668877-1668896 | Msa1306730:three_prime_UTR | 40.0% | |
| CATTCTCTCTAATTCCAGAC+TGG | + | chr8_4:1669059-1669078 | Msa1306730:three_prime_UTR | 40.0% | |
| ! | GAACTGAGTAACGGAACAAG+CGG | + | chr8_4:1661820-1661839 | Msa1306730:five_prime_UTR | 45.0% |
| !!! | TGGTGGTGGTTTTCCGAATA+TGG | - | chr8_4:1662072-1662091 | None:intergenic | 45.0% |
| !! | GAAAGTGTTGGAAATGGTGG+TGG | - | chr8_4:1662086-1662105 | None:intergenic | 45.0% |
| AGAATCGTTACTTCCAGTGG+TGG | + | chr8_4:1662139-1662158 | Msa1306730:CDS | 45.0% | |
| AATGAATCTACGACCACCAC+TGG | - | chr8_4:1662155-1662174 | None:intergenic | 45.0% | |
| ACAACAGCATCTTCAGTAGG+AGG | - | chr8_4:1662190-1662209 | None:intergenic | 45.0% | |
| GCAACAACAGCATCTTCAGT+AGG | - | chr8_4:1662193-1662212 | None:intergenic | 45.0% | |
| ! | CTCATCGATTATCTCGCTTC+TGG | + | chr8_4:1662238-1662257 | Msa1306730:CDS | 45.0% |
| ! | CGCTTCTGGTTGTAAAACCA+AGG | + | chr8_4:1662252-1662271 | Msa1306730:CDS | 45.0% |
| TATGTAGCTCAGCTCAGCTA+GGG | - | chr8_4:1662714-1662733 | None:intergenic | 45.0% | |
| ATATGTAGCTCAGCTCAGCT+AGG | - | chr8_4:1662715-1662734 | None:intergenic | 45.0% | |
| GTATAGCGTATGTGTGCTTC+TGG | + | chr8_4:1662784-1662803 | Msa1306730:intron | 45.0% | |
| GTATAGCGTATGTGTGCTTC+TGG | + | chr8_4:1662784-1662803 | Msa1306730:intron | 45.0% | |
| GCATTGCTGAGAGATTTGAC+TGG | + | chr8_4:1663802-1663821 | Msa1306730:CDS | 45.0% | |
| TTGCGCACATTGTGTGAAAC+AGG | + | chr8_4:1664000-1664019 | Msa1306730:intron | 45.0% | |
| TGCGCACATTGTGTGAAACA+GGG | + | chr8_4:1664001-1664020 | Msa1306730:intron | 45.0% | |
| CAGAGCATATCATTAGAGCC+AGG | + | chr8_4:1664028-1664047 | Msa1306730:CDS | 45.0% | |
| AGCATATCATTAGAGCCAGG+TGG | + | chr8_4:1664031-1664050 | Msa1306730:CDS | 45.0% | |
| CTAAGTTCAAACTGACCACC+TGG | - | chr8_4:1664049-1664068 | None:intergenic | 45.0% | |
| GGTGGTCAGTTTGAACTTAG+TGG | + | chr8_4:1664049-1664068 | Msa1306730:CDS | 45.0% | |
| CTGATGCAGAGTTTCAAGAG+GGG | - | chr8_4:1664077-1664096 | None:intergenic | 45.0% | |
| GTCTGATGCAGAGTTTCAAG+AGG | - | chr8_4:1664079-1664098 | None:intergenic | 45.0% | |
| GTTGCTGAGGAAATGGGAAT+TGG | + | chr8_4:1664417-1664436 | Msa1306730:CDS | 45.0% | |
| !! | GATTGGTTTCCAGCCAAAGT+GGG | + | chr8_4:1664449-1664468 | Msa1306730:CDS | 45.0% |
| ATGTCTTTGCGTTCCCACTT+TGG | - | chr8_4:1664465-1664484 | None:intergenic | 45.0% | |
| GACCAATGGACCATAAACAG+AGG | - | chr8_4:1664609-1664628 | None:intergenic | 45.0% | |
| ! | TGGTCCATTGGTCGTGATTT+TGG | + | chr8_4:1664616-1664635 | Msa1306730:intron | 45.0% |
| CAAGCCAAAATCACGACCAA+TGG | - | chr8_4:1664623-1664642 | None:intergenic | 45.0% | |
| TGGCTTGATTTCCTGACATC+AGG | + | chr8_4:1664636-1664655 | Msa1306730:intron | 45.0% | |
| CCTGAGCCACAACAAAAAGA+CGG | - | chr8_4:1664903-1664922 | None:intergenic | 45.0% | |
| !! | CGTCTTTTTGTTGTGGCTCA+GGG | + | chr8_4:1664901-1664920 | Msa1306730:intron | 45.0% |
| AGCCCAAGAGAACCAACTTT+AGG | - | chr8_4:1664955-1664974 | None:intergenic | 45.0% | |
| TTGGGCTTGACATGATGTTC+AGG | + | chr8_4:1664968-1664987 | Msa1306730:CDS | 45.0% | |
| ! | CAGGTGACTCGTGTGATTTT+TGG | + | chr8_4:1665003-1665022 | Msa1306730:intron | 45.0% |
| !! | GTTCTGAAGCTGACATGATC+AGG | + | chr8_4:1665135-1665154 | Msa1306730:CDS | 45.0% |
| TTCTTACAGGCTGCAAAGCT+AGG | - | chr8_4:1665175-1665194 | None:intergenic | 45.0% | |
| GCTGTTGCTATCTGTTGTGA+AGG | - | chr8_4:1665263-1665282 | None:intergenic | 45.0% | |
| GCAAATTCACCCTTCACAGA+TGG | + | chr8_4:1665290-1665309 | Msa1306730:CDS | 45.0% | |
| TTGGGCTTTCCATCTGTGAA+GGG | - | chr8_4:1665302-1665321 | None:intergenic | 45.0% | |
| ATTGGGCTTTCCATCTGTGA+AGG | - | chr8_4:1665303-1665322 | None:intergenic | 45.0% | |
| TTCACAGATGGAAAGCCCAA+TGG | + | chr8_4:1665302-1665321 | Msa1306730:CDS | 45.0% | |
| TCACAGATGGAAAGCCCAAT+GGG | + | chr8_4:1665303-1665322 | Msa1306730:CDS | 45.0% | |
| GGATCGCTTGATCAGCAAAA+GGG | - | chr8_4:1665612-1665631 | None:intergenic | 45.0% | |
| AGGATCGCTTGATCAGCAAA+AGG | - | chr8_4:1665613-1665632 | None:intergenic | 45.0% | |
| ! | GTTTTCGAACTCTCTGATGC+AGG | + | chr8_4:1665961-1665980 | Msa1306730:intron | 45.0% |
| ACTGTACTGGAATGACCTTC+AGG | + | chr8_4:1666054-1666073 | Msa1306730:CDS | 45.0% | |
| CTGTACTGGAATGACCTTCA+GGG | + | chr8_4:1666055-1666074 | Msa1306730:CDS | 45.0% | |
| AGGATAGATGAGAACCCTGA+AGG | - | chr8_4:1666072-1666091 | None:intergenic | 45.0% | |
| CTACATGAACACTGTGGTCT+AGG | - | chr8_4:1666165-1666184 | None:intergenic | 45.0% | |
| GCAAAGCTACATGAACACTG+TGG | - | chr8_4:1666171-1666190 | None:intergenic | 45.0% | |
| TTACTGTAGGACTTCTTGGC+AGG | + | chr8_4:1666223-1666242 | Msa1306730:intron | 45.0% | |
| GGAAAGCTTCCTTGTATTCC+TGG | + | chr8_4:1666244-1666263 | Msa1306730:CDS | 45.0% | |
| TTAAGGGTCGGTAATTCACC+AGG | - | chr8_4:1666265-1666284 | None:intergenic | 45.0% | |
| CTTTCCAGGTTAGGCTAAAG+AGG | + | chr8_4:1666423-1666442 | Msa1306730:intron | 45.0% | |
| CACAAACTCACCCAAAATGC+TGG | - | chr8_4:1666503-1666522 | None:intergenic | 45.0% | |
| CATCGTACAATATCCCTACC+TGG | - | chr8_4:1666711-1666730 | None:intergenic | 45.0% | |
| GGTAGGGATATTGTACGATG+AGG | + | chr8_4:1666711-1666730 | Msa1306730:intron | 45.0% | |
| ! | CCCAGAAGCATAAGTAAGCT+AGG | + | chr8_4:1666847-1666866 | Msa1306730:intron | 45.0% |
| GCCCATGCTTCAAGTAGAAA+TGG | - | chr8_4:1666934-1666953 | None:intergenic | 45.0% | |
| ATCCATTTGGGCTTGAAGCA+TGG | + | chr8_4:1667004-1667023 | Msa1306730:intron | 45.0% | |
| TCCATTTGGGCTTGAAGCAT+GGG | + | chr8_4:1667005-1667024 | Msa1306730:intron | 45.0% | |
| AGGAACATATCTCTCCATCC+AGG | - | chr8_4:1667211-1667230 | None:intergenic | 45.0% | |
| TGGTGTCTTTAGACCGGTTA+CGG | - | chr8_4:1667758-1667777 | None:intergenic | 45.0% | |
| ! | AAATAGGGCCATCTGAAGCA+TGG | - | chr8_4:1668032-1668051 | None:intergenic | 45.0% |
| CTTCAGATGGCCCTATTTCA+TGG | + | chr8_4:1668034-1668053 | Msa1306730:intron | 45.0% | |
| ATGAGAGAGCAGCAGAACAT+TGG | - | chr8_4:1668137-1668156 | None:intergenic | 45.0% | |
| AATTCCAAAAGCCTCTCAGC+TGG | - | chr8_4:1668714-1668733 | None:intergenic | 45.0% | |
| ATCTCACAAGAGAGATAGCC+AGG | - | chr8_4:1668898-1668917 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTAAAAAAAAACA+AGG | - | chr8_4:1667536-1667555 | None:intergenic | 5.0% |
| !!! | TTTTTTTAAAAAAAAAGTTT+TGG | + | chr8_4:1667540-1667559 | Msa1306730:intron | 5.0% |
| !!! | TTTTTTAAAAAAAAAGTTTT+GGG | + | chr8_4:1667541-1667560 | Msa1306730:intron | 5.0% |
| !! | AGTTATGTGGTGTTGCGTCG+TGG | - | chr8_4:1662048-1662067 | None:intergenic | 50.0% |
| CACGCACCTCCATTTATCCT+TGG | - | chr8_4:1662272-1662291 | None:intergenic | 50.0% | |
| !!! | TGCTGTTTTGTCGTCACCTC+AGG | + | chr8_4:1662640-1662659 | Msa1306730:intron | 50.0% |
| ! | TTTTGTCGTCACCTCAGGTC+AGG | + | chr8_4:1662645-1662664 | Msa1306730:intron | 50.0% |
| CTCAGCTAGGGTAATCACTC+AGG | - | chr8_4:1663152-1663171 | None:intergenic | 50.0% | |
| GCGCACATTGTGTGAAACAG+GGG | + | chr8_4:1664002-1664021 | Msa1306730:intron | 50.0% | |
| !! | GGATTGGTTTCCAGCCAAAG+TGG | + | chr8_4:1664448-1664467 | Msa1306730:CDS | 50.0% |
| GCCCTCTGTTTATGGTCCAT+TGG | + | chr8_4:1664604-1664623 | Msa1306730:intron | 50.0% | |
| AGCTCCATGGGAATGACATG+TGG | + | chr8_4:1664789-1664808 | Msa1306730:intron | 50.0% | |
| !! | CCGTCTTTTTGTTGTGGCTC+AGG | + | chr8_4:1664900-1664919 | Msa1306730:intron | 50.0% |
| GTTCAGGACATGCACTGTAC+AGG | + | chr8_4:1664984-1665003 | Msa1306730:CDS | 50.0% | |
| GATACCGATAAGGACCGTAC+AGG | + | chr8_4:1665455-1665474 | Msa1306730:CDS | 50.0% | |
| CATGCCTGTACGGTCCTTAT+CGG | - | chr8_4:1665462-1665481 | None:intergenic | 50.0% | |
| CAAAAGGCAGCATGCCTGTA+CGG | - | chr8_4:1665472-1665491 | None:intergenic | 50.0% | |
| !! | TTGGAGATGAGAGGTGCTGA+TGG | + | chr8_4:1666449-1666468 | Msa1306730:CDS | 50.0% |
| !! | AGATGAGAGGTGCTGATGGA+GGG | + | chr8_4:1666453-1666472 | Msa1306730:CDS | 50.0% |
| TGTTCCTGATTGTGCCAGGT+AGG | + | chr8_4:1666694-1666713 | Msa1306730:intron | 50.0% | |
| GTTCCTGATTGTGCCAGGTA+GGG | + | chr8_4:1666695-1666714 | Msa1306730:intron | 50.0% | |
| TATCCCTACCTGGCACAATC+AGG | - | chr8_4:1666701-1666720 | None:intergenic | 50.0% | |
| ACTGATAACCGGAGTCTCTC+TGG | + | chr8_4:1667725-1667744 | Msa1306730:intron | 50.0% | |
| GCTGAAGCATGTTGCTGAAG+AGG | + | chr8_4:1667792-1667811 | Msa1306730:CDS | 50.0% | |
| !! | TGCTGAAGAGGTTCTAGAGC+TGG | + | chr8_4:1667804-1667823 | Msa1306730:CDS | 50.0% |
| !! | AGAGGTTCTAGAGCTGGCAA+AGG | + | chr8_4:1667810-1667829 | Msa1306730:CDS | 50.0% |
| ! | CAGGATGGCTTGGAAAGAAG+AGG | + | chr8_4:1667903-1667922 | Msa1306730:intron | 50.0% |
| TCTAAATGCGGTAGCTGAGG+TGG | + | chr8_4:1667944-1667963 | Msa1306730:CDS | 50.0% | |
| GTAGCTGAGGTGGTTAGAAC+AGG | + | chr8_4:1667954-1667973 | Msa1306730:CDS | 50.0% | |
| CTTTGCGTTCCCACTTTGGC+TGG | - | chr8_4:1664461-1664480 | None:intergenic | 55.0% | |
| !! | GAGATGAGAGGTGCTGATGG+AGG | + | chr8_4:1666452-1666471 | Msa1306730:CDS | 55.0% |
| GCCCATGCTTCAAGCCCAAA+TGG | - | chr8_4:1667009-1667028 | None:intergenic | 55.0% | |
| ATAACCGGAGTCTCTCTGGC+AGG | + | chr8_4:1667729-1667748 | Msa1306730:intron | 55.0% | |
| ! | CACTCCAGCTGAGAGGCTTT+TGG | + | chr8_4:1668707-1668726 | Msa1306730:CDS | 55.0% |
| GTTGCGTCGTGGCGTAGAGA+GGG | - | chr8_4:1662037-1662056 | None:intergenic | 60.0% | |
| TGTTGCGTCGTGGCGTAGAG+AGG | - | chr8_4:1662038-1662057 | None:intergenic | 60.0% | |
| GCGACGCATTACCTGACCTG+AGG | - | chr8_4:1662659-1662678 | None:intergenic | 60.0% | |
| CTGATGGAGGGCCTTGGAGA+AGG | + | chr8_4:1666465-1666484 | Msa1306730:CDS | 60.0% | |
| GTGACCTGCCAGAGAGACTC+CGG | - | chr8_4:1667736-1667755 | None:intergenic | 60.0% | |
| CTCTGGCAGGTCACCGTAAC+CGG | + | chr8_4:1667742-1667761 | Msa1306730:intron | 60.0% | |
| !! | CAGGTGTCACTCCAGCTGAG+AGG | + | chr8_4:1668700-1668719 | Msa1306730:intron | 60.0% |
| GTGGCGTAGAGAGGGAGAGG+AGG | - | chr8_4:1662029-1662048 | None:intergenic | 65.0% | |
| GTCGTGGCGTAGAGAGGGAG+AGG | - | chr8_4:1662032-1662051 | None:intergenic | 65.0% | |
| !! | GAGGTGCTGATGGAGGGCCT+TGG | + | chr8_4:1666459-1666478 | Msa1306730:CDS | 65.0% |
| TCACACGCACGCACGCACGT+AGG | + | chr8_4:1667280-1667299 | Msa1306730:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 1661613 | 1669083 | 1661613 | ID=Msa1306730;Name=Msa1306730 |
| chr8_4 | mRNA | 1661613 | 1669083 | 1661613 | ID=Msa1306730-mRNA-1;Parent=Msa1306730;Name=Msa1306730-mRNA-1;_AED=0.11;_eAED=0.11;_QI=385|1|1|1|0.92|1|15|292|509 |
| chr8_4 | exon | 1661613 | 1662284 | 1661613 | ID=Msa1306730-mRNA-1:exon:467;Parent=Msa1306730-mRNA-1 |
| chr8_4 | exon | 1663716 | 1663866 | 1663716 | ID=Msa1306730-mRNA-1:exon:468;Parent=Msa1306730-mRNA-1 |
| chr8_4 | exon | 1664022 | 1664129 | 1664022 | ID=Msa1306730-mRNA-1:exon:469;Parent=Msa1306730-mRNA-1 |
| chr8_4 | exon | 1664408 | 1664500 | 1664408 | ID=Msa1306730-mRNA-1:exon:470;Parent=Msa1306730-mRNA-1 |
| chr8_4 | exon | 1664922 | 1665005 | 1664922 | ID=Msa1306730-mRNA-1:exon:471;Parent=Msa1306730-mRNA-1 |
| chr8_4 | exon | 1665119 | 1665187 | 1665119 | ID=Msa1306730-mRNA-1:exon:472;Parent=Msa1306730-mRNA-1 |
| chr8_4 | exon | 1665272 | 1665342 | 1665272 | ID=Msa1306730-mRNA-1:exon:473;Parent=Msa1306730-mRNA-1 |
| chr8_4 | exon | 1665442 | 1665510 | 1665442 | ID=Msa1306730-mRNA-1:exon:474;Parent=Msa1306730-mRNA-1 |
| chr8_4 | exon | 1665983 | 1666076 | 1665983 | ID=Msa1306730-mRNA-1:exon:475;Parent=Msa1306730-mRNA-1 |
| chr8_4 | exon | 1666232 | 1666321 | 1666232 | ID=Msa1306730-mRNA-1:exon:476;Parent=Msa1306730-mRNA-1 |
| chr8_4 | exon | 1666431 | 1666511 | 1666431 | ID=Msa1306730-mRNA-1:exon:477;Parent=Msa1306730-mRNA-1 |
| chr8_4 | exon | 1666712 | 1666804 | 1666712 | ID=Msa1306730-mRNA-1:exon:478;Parent=Msa1306730-mRNA-1 |
| chr8_4 | exon | 1667751 | 1667831 | 1667751 | ID=Msa1306730-mRNA-1:exon:479;Parent=Msa1306730-mRNA-1 |
| chr8_4 | exon | 1667906 | 1667975 | 1667906 | ID=Msa1306730-mRNA-1:exon:480;Parent=Msa1306730-mRNA-1 |
| chr8_4 | exon | 1668703 | 1669083 | 1668703 | ID=Msa1306730-mRNA-1:exon:481;Parent=Msa1306730-mRNA-1 |
| chr8_4 | five_prime_UTR | 1661613 | 1661997 | 1661613 | ID=Msa1306730-mRNA-1:five_prime_utr;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1661998 | 1662284 | 1661998 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1663716 | 1663866 | 1663716 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1664022 | 1664129 | 1664022 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1664408 | 1664500 | 1664408 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1664922 | 1665005 | 1664922 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1665119 | 1665187 | 1665119 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1665272 | 1665342 | 1665272 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1665442 | 1665510 | 1665442 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1665983 | 1666076 | 1665983 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1666232 | 1666321 | 1666232 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1666431 | 1666511 | 1666431 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1666712 | 1666804 | 1666712 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1667751 | 1667831 | 1667751 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1667906 | 1667975 | 1667906 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | CDS | 1668703 | 1668791 | 1668703 | ID=Msa1306730-mRNA-1:cds;Parent=Msa1306730-mRNA-1 |
| chr8_4 | three_prime_UTR | 1668792 | 1669083 | 1668792 | ID=Msa1306730-mRNA-1:three_prime_utr;Parent=Msa1306730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
