Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0575900 | XP_003631131.2 | 97.070 | 1092 | 30 | 1 | 1 | 1092 | 1 | 1090 | 0.0 | 2164 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0575900 | sp|Q6P4K6|S11IP_XENTR | 29.825 | 342 | 221 | 10 | 10 | 343 | 10 | 340 | 2.15e-23 | 111 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0575900 | G7LE75 | 97.070 | 1092 | 30 | 1 | 1 | 1092 | 1 | 1090 | 0.0 | 2164 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0082290 | Msa0575900 | 0.800715 | 1.265553e-48 | -8.615850e-47 |
Msa0575900 | Msa0902090 | 0.824846 | 6.468862e-54 | -8.615850e-47 |
Msa0575900 | Msa1085520 | 0.878491 | 2.689589e-69 | -8.615850e-47 |
Msa0575900 | Msa1434670 | 0.942753 | 4.109781e-102 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0575900 | MtrunA17_Chr8g0393181 | 97.070 | 1092 | 30 | 1 | 1 | 1092 | 1 | 1090 | 0.0 | 2164 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0575900 | AT1G48540.1 | 48.401 | 1126 | 478 | 21 | 1 | 1089 | 1 | 1060 | 0.0 | 936 |
Msa0575900 | AT1G48540.2 | 47.957 | 1126 | 471 | 20 | 1 | 1089 | 1 | 1048 | 0.0 | 928 |
Msa0575900 | AT1G48540.3 | 49.715 | 1052 | 446 | 18 | 1 | 1015 | 1 | 1006 | 0.0 | 917 |
Msa0575900 | AT3G17920.1 | 67.364 | 478 | 154 | 2 | 1 | 477 | 1 | 477 | 0.0 | 653 |
Msa0575900 | AT3G17920.1 | 36.617 | 538 | 285 | 12 | 571 | 1089 | 505 | 1005 | 1.61e-73 | 264 |
Msa0575900 | AT3G17920.2 | 60.350 | 343 | 134 | 2 | 136 | 477 | 6 | 347 | 1.90e-131 | 421 |
Msa0575900 | AT3G17920.2 | 36.617 | 538 | 285 | 12 | 571 | 1089 | 375 | 875 | 7.19e-74 | 263 |
Msa0575900 | AT3G17920.3 | 59.459 | 296 | 118 | 2 | 183 | 477 | 1 | 295 | 4.04e-107 | 355 |
Msa0575900 | AT3G17920.3 | 36.617 | 538 | 285 | 12 | 571 | 1089 | 323 | 823 | 2.71e-74 | 263 |
Find 257 sgRNAs with CRISPR-Local
Find 667 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCCTTATTTGTATGGTTTC+TGG | -0.019119 | 4_1:-79882765 | None:intergenic |
CAAAATGGCATTTGTTTATT+TGG | 0.086252 | 4_1:+79883439 | Msa0575900:CDS |
CTGTCACCTACGTCTTTATT+TGG | 0.131388 | 4_1:-79879433 | None:intergenic |
CCTTTGTCTTTCTTGCCTTT+TGG | 0.148316 | 4_1:+79879969 | Msa0575900:CDS |
CATTTGAACCACCGCATATT+TGG | 0.168722 | 4_1:-79887095 | None:intergenic |
GACAGATTACAGCAAATTTA+AGG | 0.195480 | 4_1:+79883671 | Msa0575900:CDS |
ACCACTATTGATGATATAAA+TGG | 0.209051 | 4_1:+79883115 | Msa0575900:CDS |
CATAAGCAACCTGCCAGTTT+TGG | 0.222173 | 4_1:+79882191 | Msa0575900:CDS |
CAATGCTTCTTGTTACAAAA+AGG | 0.228421 | 4_1:-79886749 | None:intergenic |
GGATCAATCAGTGCGGAATT+AGG | 0.232112 | 4_1:-79879635 | None:intergenic |
AAACTTCAAAAGGTTATCTT+TGG | 0.256257 | 4_1:-79888619 | None:intergenic |
CATGTTGCTCCTTATTTGTA+TGG | 0.256967 | 4_1:-79882772 | None:intergenic |
TATTGAAATAACTCTCTTCT+TGG | 0.257019 | 4_1:-79883590 | None:intergenic |
TCCTTATTTGTATGGTTTCT+GGG | 0.273009 | 4_1:-79882764 | None:intergenic |
CATGAATCGATTCTGTAATA+TGG | 0.277449 | 4_1:-79887684 | None:intergenic |
TTGAACCCTGCTTAGAAGTT+TGG | 0.293130 | 4_1:-79883474 | None:intergenic |
AGAAAGAGCGTTCTATTCTT+TGG | 0.302754 | 4_1:+79882642 | Msa0575900:CDS |
GATATAAATCAAAGAATTAA+AGG | 0.310805 | 4_1:-79888829 | None:intergenic |
TACCGATGGGCGTTTGTGTT+TGG | 0.311772 | 4_1:+79879484 | Msa0575900:five_prime_UTR |
CAGGTCCAGGTTGAGTTGTT+TGG | 0.330217 | 4_1:+79887069 | Msa0575900:CDS |
GATCAATCAGTGCGGAATTA+GGG | 0.332183 | 4_1:-79879634 | None:intergenic |
ACAAGGTTCAATTGGGTAGA+AGG | 0.335023 | 4_1:-79888537 | None:intergenic |
GCATGAATACTTCCTTGTCT+TGG | 0.344637 | 4_1:-79883412 | None:intergenic |
AGTCATTCTATGTGCTCCTT+GGG | 0.344879 | 4_1:-79883068 | None:intergenic |
ATATGGGTGACAATCGACTA+TGG | 0.345961 | 4_1:-79883320 | None:intergenic |
ACGTATCGATCAATTTAATA+TGG | 0.346289 | 4_1:+79879578 | Msa0575900:five_prime_UTR |
GCTTGTTGGAATGGGACTTC+AGG | 0.346324 | 4_1:+79886619 | Msa0575900:CDS |
GACAGCTGCTGTGTTACTTT+AGG | 0.346501 | 4_1:+79888486 | Msa0575900:CDS |
CTGTCTTGCAACCTCCCGTT+AGG | 0.346736 | 4_1:+79879937 | Msa0575900:CDS |
TACCTAACTAACTGTTGGTT+TGG | 0.350187 | 4_1:+79888942 | Msa0575900:three_prime_UTR |
CAGTCATTCTATGTGCTCCT+TGG | 0.350313 | 4_1:-79883069 | None:intergenic |
TGACAGTTACAAGGTTCAAT+TGG | 0.359515 | 4_1:-79888545 | None:intergenic |
GAGAATGCAAACATCAATTC+AGG | 0.360803 | 4_1:+79883619 | Msa0575900:CDS |
GAAGGGATTCGAGCCTTGAT+TGG | 0.363206 | 4_1:-79879782 | None:intergenic |
CGATAAAATCATCATTCTCT+TGG | 0.363538 | 4_1:-79883747 | None:intergenic |
TGGAAGGTGGCAATAATAGA+AGG | 0.363843 | 4_1:+79882246 | Msa0575900:CDS |
TCAGATTCTGTTCTAGCTTC+AGG | 0.365161 | 4_1:+79882815 | Msa0575900:CDS |
TATGTTGTGCCCGATGGTAT+AGG | 0.365488 | 4_1:+79881774 | Msa0575900:CDS |
AGTATTCATGCAGGACAAAA+TGG | 0.367215 | 4_1:+79883424 | Msa0575900:CDS |
ACCCAGAAACCATACAAATA+AGG | 0.368179 | 4_1:+79882763 | Msa0575900:CDS |
GCGTTCTATTCTTTGGTTGC+GGG | 0.378772 | 4_1:+79882649 | Msa0575900:CDS |
GAGAATTTGAAGTCACTTGA+AGG | 0.380141 | 4_1:+79881653 | Msa0575900:CDS |
ATGTTGTGCCCGATGGTATA+GGG | 0.388917 | 4_1:+79881775 | Msa0575900:CDS |
CATGAATACTTCCTTGTCTT+GGG | 0.390055 | 4_1:-79883411 | None:intergenic |
AGATGATTTGATTAATAAAG+TGG | 0.391751 | 4_1:+79882610 | Msa0575900:CDS |
TGTGACCGGAGATCGTTATC+TGG | 0.400881 | 4_1:+79879668 | Msa0575900:CDS |
GAGGTCCAAATGCTTCAATT+TGG | 0.402783 | 4_1:-79880378 | None:intergenic |
CTAATTAATGTTGCTTCTGA+TGG | 0.402969 | 4_1:+79885588 | Msa0575900:CDS |
ATAATGATTACAGCCTTCAT+TGG | 0.404740 | 4_1:-79883806 | None:intergenic |
AGCTTCAATTTCAGAGAGCC+TGG | 0.405591 | 4_1:-79888585 | None:intergenic |
TGTCAAGTTCGTCGAAGATC+AGG | 0.407629 | 4_1:+79879698 | Msa0575900:CDS |
AAAATTGGAAATAATATTGT+AGG | 0.411948 | 4_1:-79881687 | None:intergenic |
TACCATCGGGCACAACATAA+AGG | 0.415919 | 4_1:-79881770 | None:intergenic |
AGGTAACAACAGACTAACTA+TGG | 0.419149 | 4_1:-79888924 | None:intergenic |
AGCCAAACCAACAGTTAGTT+AGG | 0.422138 | 4_1:-79888944 | None:intergenic |
CTGTACCAAATTGAAGCATT+TGG | 0.422440 | 4_1:+79880373 | Msa0575900:CDS |
TCAGAGCTAGAGTTTCTTGT+GGG | 0.422619 | 4_1:+79881710 | Msa0575900:CDS |
AATGTTGCTTCTGATGGATC+AGG | 0.422987 | 4_1:+79885594 | Msa0575900:CDS |
CTCCGGTCACAATCGCCATA+TGG | 0.423429 | 4_1:-79879656 | None:intergenic |
GGCAGGTTGCTTATGCATAC+TGG | 0.427115 | 4_1:-79882183 | None:intergenic |
CGGGAGGTGCTTGTTGGAAT+GGG | 0.433620 | 4_1:+79886611 | Msa0575900:CDS |
AAATTTCCTCTACCAAGTTA+TGG | 0.434645 | 4_1:-79883204 | None:intergenic |
GAATGATAATCGGTTCCATT+GGG | 0.436979 | 4_1:-79880234 | None:intergenic |
GCAAAGACACAAACTTCAAA+AGG | 0.438821 | 4_1:-79888629 | None:intergenic |
CGAATGATAATCGGTTCCAT+TGG | 0.440993 | 4_1:-79880235 | None:intergenic |
TCTTTGCAGGTGATTGTGGC+TGG | 0.446060 | 4_1:+79888462 | Msa0575900:intron |
CACAAGATACGAATGATAAT+CGG | 0.446427 | 4_1:-79880244 | None:intergenic |
GCTTCGTCATCAAATAAATC+AGG | 0.447910 | 4_1:-79882581 | None:intergenic |
TTTGATTACAGAGGATCTCT+TGG | 0.449966 | 4_1:+79882917 | Msa0575900:CDS |
AGGTACATAAATCCCAAAAC+TGG | 0.450026 | 4_1:-79882204 | None:intergenic |
ATTAATTCCCTGAAGTGAAA+AGG | 0.450415 | 4_1:-79882999 | None:intergenic |
ACATGAATCAAACACTTGTA+TGG | 0.452403 | 4_1:-79886796 | None:intergenic |
CCAAAGGATTGCTCGACCTC+AGG | 0.452471 | 4_1:+79880042 | Msa0575900:CDS |
CACTAGTATATGTTCTGATC+AGG | 0.453331 | 4_1:+79882517 | Msa0575900:CDS |
AGAGAGATGATGATAATAAT+CGG | 0.454730 | 4_1:-79879606 | None:intergenic |
ACTTGTTCCTGCTAAGATCA+AGG | 0.455786 | 4_1:-79880325 | None:intergenic |
GAAGCTCGGGAGGTGCTTGT+TGG | 0.455987 | 4_1:+79886605 | Msa0575900:CDS |
GCTCTCTGAAATTGAAGCTT+CGG | 0.458757 | 4_1:+79888589 | Msa0575900:CDS |
TCTTCATCGCCGCCATAACT+TGG | 0.459440 | 4_1:+79883192 | Msa0575900:CDS |
TTACTCTTTGCAGGTGATTG+TGG | 0.460046 | 4_1:+79888458 | Msa0575900:intron |
GGGCCTCTCTTTCTGACTCA+GGG | 0.460973 | 4_1:+79882951 | Msa0575900:CDS |
TGCCAAGGATGAGGCTATAG+TGG | 0.461145 | 4_1:+79882226 | Msa0575900:CDS |
CGTGCCTACGTCTCCGACCT+CGG | 0.462533 | 4_1:+79879849 | Msa0575900:CDS |
ATCAGAAGACGCCACTGAAA+AGG | 0.462852 | 4_1:-79883245 | None:intergenic |
CCCGAGCTTCTTCCATCTTG+TGG | 0.463533 | 4_1:-79886592 | None:intergenic |
AAAGGGGTGGGATCCCTAAC+GGG | 0.463715 | 4_1:-79879951 | None:intergenic |
TCGGGAGGTGCTTGTTGGAA+TGG | 0.463874 | 4_1:+79886610 | Msa0575900:CDS |
TAGTGACCAAACTTCTAAGC+AGG | 0.464472 | 4_1:+79883468 | Msa0575900:CDS |
ATCCATATGGCGATTGTGAC+CGG | 0.464801 | 4_1:+79879654 | Msa0575900:exon |
CCTGAGGTCGAGCAATCCTT+TGG | 0.466535 | 4_1:-79880042 | None:intergenic |
TCGTCTTCTCACTTCCCTCA+AGG | 0.467164 | 4_1:+79879908 | Msa0575900:CDS |
TGAAAGTGAGGAGGGGATGT+GGG | 0.471671 | 4_1:-79883160 | None:intergenic |
GATAAAATCATCATTCTCTT+GGG | 0.472564 | 4_1:-79883746 | None:intergenic |
GACAGTTACAAGGTTCAATT+GGG | 0.474318 | 4_1:-79888544 | None:intergenic |
TGTAGTTTGTCTCCATCTGA+AGG | 0.476704 | 4_1:-79883846 | None:intergenic |
GGGGCCTCTCTTTCTGACTC+AGG | 0.478699 | 4_1:+79882950 | Msa0575900:CDS |
AGCCTGGGGCCGTGTTTCCA+TGG | 0.479911 | 4_1:-79888569 | None:intergenic |
TGGAAATTCAATTCAGTCAG+AGG | 0.480658 | 4_1:-79879544 | None:intergenic |
TTTAAATGGCAGTTTGGAGC+AGG | 0.481142 | 4_1:+79887050 | Msa0575900:intron |
GTTGTTACCTAACTAACTGT+TGG | 0.481314 | 4_1:+79888937 | Msa0575900:three_prime_UTR |
AGCCATGGAAACACGGCCCC+AGG | 0.481372 | 4_1:+79888567 | Msa0575900:CDS |
ATCTTGTGCATGCAATGGTT+TGG | 0.481394 | 4_1:+79880259 | Msa0575900:CDS |
TCCGCACTGATTGATCCATA+TGG | 0.482564 | 4_1:+79879641 | Msa0575900:exon |
GCAGCACATAGAGCTTCTTA+AGG | 0.484489 | 4_1:-79885566 | None:intergenic |
TCGATACGTGTACGGATGAA+TGG | 0.487703 | 4_1:-79879564 | None:intergenic |
TCAGTTGAAGTTAGATGAGA+AGG | 0.487986 | 4_1:+79882118 | Msa0575900:intron |
TTCCATGGCTGACAGTTACA+AGG | 0.491978 | 4_1:-79888554 | None:intergenic |
TTGAAAGTGAGGAGGGGATG+TGG | 0.492408 | 4_1:-79883161 | None:intergenic |
TCGAAACCCTTGATCTTAGC+AGG | 0.493993 | 4_1:+79880318 | Msa0575900:CDS |
CTTGTTCCTGCTAAGATCAA+GGG | 0.495319 | 4_1:-79880324 | None:intergenic |
CGTATTGAGTTGCCACAAGA+TGG | 0.502622 | 4_1:+79886580 | Msa0575900:CDS |
CCACTATTGATGATATAAAT+GGG | 0.502698 | 4_1:+79883116 | Msa0575900:CDS |
TGTCTTGCAACCTCCCGTTA+GGG | 0.502939 | 4_1:+79879938 | Msa0575900:CDS |
AGCGTTCTATTCTTTGGTTG+CGG | 0.503044 | 4_1:+79882648 | Msa0575900:CDS |
TGGACGTAGTGAAGGCCGGC+TGG | 0.503292 | 4_1:-79879762 | None:intergenic |
GTACTTGTCTGTTGTAATCA+TGG | 0.503432 | 4_1:+79887141 | Msa0575900:CDS |
ATGCAATGGTTTGGTTCTCA+TGG | 0.505843 | 4_1:+79880268 | Msa0575900:CDS |
TTTCTTCGCCTACCCAGAAA+AGG | 0.506568 | 4_1:+79881811 | Msa0575900:CDS |
CCCATTTATATCATCAATAG+TGG | 0.507375 | 4_1:-79883116 | None:intergenic |
GCTCATCAGGGTAAATTTCG+AGG | 0.508192 | 4_1:+79886713 | Msa0575900:intron |
TGGCAGTTTGGAGCAGGTCC+AGG | 0.508363 | 4_1:+79887056 | Msa0575900:intron |
TTATTGTATAGGATGCTCTT+CGG | 0.509233 | 4_1:+79880171 | Msa0575900:intron |
GAAGTTTGTGTCTTTGCTGA+AGG | 0.510057 | 4_1:+79888635 | Msa0575900:CDS |
ATTCTAGATGCTCAATAAGA+AGG | 0.510659 | 4_1:+79886826 | Msa0575900:CDS |
CAAGGAGCACATAGAATGAC+TGG | 0.510812 | 4_1:+79883070 | Msa0575900:CDS |
TTCCACTATAGCCTCATCCT+TGG | 0.511244 | 4_1:-79882228 | None:intergenic |
GCCACAAGATGGAAGAAGCT+CGG | 0.511645 | 4_1:+79886591 | Msa0575900:CDS |
GAACAAGAGCAGATAAATCA+AGG | 0.512740 | 4_1:+79883649 | Msa0575900:CDS |
CAAAGGGGTGGGATCCCTAA+CGG | 0.514034 | 4_1:-79879952 | None:intergenic |
TGGAGACAAACTACAAAGAA+AGG | 0.516760 | 4_1:+79883854 | Msa0575900:CDS |
TTCAGAGCTAGAGTTTCTTG+TGG | 0.517322 | 4_1:+79881709 | Msa0575900:CDS |
CAAGACAGAAACAACCTTGA+GGG | 0.517476 | 4_1:-79879922 | None:intergenic |
GTCATTCTATGTGCTCCTTG+GGG | 0.519727 | 4_1:-79883067 | None:intergenic |
CTCTCTACTTCCGCCGCCAA+AGG | 0.520463 | 4_1:+79880026 | Msa0575900:CDS |
ATCCTTTATGTTGTGCCCGA+TGG | 0.521575 | 4_1:+79881768 | Msa0575900:CDS |
CTCTGAAATTGAAGCTTCGG+TGG | 0.523138 | 4_1:+79888592 | Msa0575900:CDS |
CCACAAGATGGAAGAAGCTC+GGG | 0.523231 | 4_1:+79886592 | Msa0575900:CDS |
AGAACCTTCAACCTCCCAAA+AGG | 0.524106 | 4_1:-79879984 | None:intergenic |
TTCGTATCTTGTGCATGCAA+TGG | 0.527567 | 4_1:+79880254 | Msa0575900:CDS |
GCCTTCATTGGCTTCAGAGT+CGG | 0.530492 | 4_1:-79883794 | None:intergenic |
CATTCTATGTGCTCCTTGGG+GGG | 0.530568 | 4_1:-79883065 | None:intergenic |
TCAAGATCGCTGTTTGTGAT+CGG | 0.531266 | 4_1:+79887591 | Msa0575900:CDS |
CAAAAGGCAAGAAAGACAAA+GGG | 0.534670 | 4_1:-79879968 | None:intergenic |
GCCTTCACTACGTCCAATCA+AGG | 0.534939 | 4_1:+79879769 | Msa0575900:CDS |
GATCTCTTGGTAATGCTAGT+GGG | 0.535192 | 4_1:+79882930 | Msa0575900:CDS |
ACATAAATCCCAAAACTGGC+AGG | 0.535792 | 4_1:-79882200 | None:intergenic |
AGATCAAGGGTTTCGACAGA+AGG | 0.536243 | 4_1:-79880311 | None:intergenic |
TGGGATTTATGTACCTGCCA+AGG | 0.537295 | 4_1:+79882211 | Msa0575900:CDS |
CAGGGTAAATTTCGAGGGTG+GGG | 0.543211 | 4_1:+79886719 | Msa0575900:intron |
TACTTGTGCCCTATACCATC+GGG | 0.543517 | 4_1:-79881783 | None:intergenic |
TCATTCTATGTGCTCCTTGG+GGG | 0.544084 | 4_1:-79883066 | None:intergenic |
ATATCATCAATAGTGGTCAA+TGG | 0.544770 | 4_1:-79883109 | None:intergenic |
GCCGACTCTGAAGCCAATGA+AGG | 0.545336 | 4_1:+79883793 | Msa0575900:CDS |
GGAAGGTGGCAATAATAGAA+GGG | 0.545490 | 4_1:+79882247 | Msa0575900:CDS |
TTGATTTGATTCGTACCGAT+GGG | 0.545903 | 4_1:+79879471 | Msa0575900:five_prime_UTR |
CTTCTCCAGATAACGATCTC+CGG | 0.547504 | 4_1:-79879673 | None:intergenic |
CTGCAATTCCATCCTTCAGA+TGG | 0.548167 | 4_1:+79883834 | Msa0575900:CDS |
GCTTCAATTTCAGAGAGCCT+GGG | 0.549606 | 4_1:-79888584 | None:intergenic |
AGTTATGGCGGCGATGAAGA+AGG | 0.551065 | 4_1:-79883189 | None:intergenic |
CACGTGAATGGGAGTGTCGA+TGG | 0.551619 | 4_1:+79883349 | Msa0575900:CDS |
GAGGTCGAGCAATCCTTTGG+CGG | 0.553473 | 4_1:-79880039 | None:intergenic |
ATACTTGTGCCCTATACCAT+CGG | 0.553998 | 4_1:-79881784 | None:intergenic |
GGTTGCCAAACAACTCAACC+TGG | 0.554356 | 4_1:-79887074 | None:intergenic |
TAGGCACGAAGGTAATCGAC+GGG | 0.554678 | 4_1:-79879834 | None:intergenic |
TTATGTACCTGCCAAGGATG+AGG | 0.555525 | 4_1:+79882217 | Msa0575900:CDS |
TTACACTTACAGAAGAATCA+TGG | 0.555851 | 4_1:+79887565 | Msa0575900:intron |
ACTATAGCCTCATCCTTGGC+AGG | 0.556386 | 4_1:-79882224 | None:intergenic |
GGTTGCGGGAATTTAGAGAC+TGG | 0.558435 | 4_1:+79882663 | Msa0575900:CDS |
TTTGATTTGATTCGTACCGA+TGG | 0.558700 | 4_1:+79879470 | Msa0575900:five_prime_UTR |
TGATTGGACGTAGTGAAGGC+CGG | 0.558868 | 4_1:-79879766 | None:intergenic |
GGATCTCTTGGTAATGCTAG+TGG | 0.559059 | 4_1:+79882929 | Msa0575900:CDS |
ATCTCTTGGTAATGCTAGTG+GGG | 0.564091 | 4_1:+79882931 | Msa0575900:CDS |
AAATTGAAGCATTTGGACCT+CGG | 0.564924 | 4_1:+79880380 | Msa0575900:CDS |
CAATCGACTATGGGAACTGA+TGG | 0.566484 | 4_1:-79883310 | None:intergenic |
TCAGGGTAAATTTCGAGGGT+GGG | 0.567035 | 4_1:+79886718 | Msa0575900:intron |
CATAGACATACCTGGGTGAA+GGG | 0.567474 | 4_1:-79880428 | None:intergenic |
GATCAAGGGTTTCGACAGAA+GGG | 0.568955 | 4_1:-79880310 | None:intergenic |
GTTTGTCTCCATCTGAAGGA+TGG | 0.571019 | 4_1:-79883842 | None:intergenic |
CTCATCAGGGTAAATTTCGA+GGG | 0.571914 | 4_1:+79886714 | Msa0575900:intron |
GTCGAGCAATCCTTTGGCGG+CGG | 0.574530 | 4_1:-79880036 | None:intergenic |
TAAATTGATCGATACGTGTA+CGG | 0.577447 | 4_1:-79879572 | None:intergenic |
TGAGAAGACGAAGGATCCTA+CGG | 0.577581 | 4_1:-79879896 | None:intergenic |
GCCTTGATTGGACGTAGTGA+AGG | 0.578086 | 4_1:-79879770 | None:intergenic |
AATTGCTGACATTACTGAGA+TGG | 0.578193 | 4_1:+79887713 | Msa0575900:CDS |
TATGGGTGACAATCGACTAT+GGG | 0.578642 | 4_1:-79883319 | None:intergenic |
GTCTTGAAGCTAAATCCAGC+CGG | 0.579709 | 4_1:+79879747 | Msa0575900:CDS |
GGAGACTCTCAAGCTCGTGA+AGG | 0.581614 | 4_1:-79879800 | None:intergenic |
CCAAAAGGCAAGAAAGACAA+AGG | 0.581929 | 4_1:-79879969 | None:intergenic |
TCGCCGCCATAACTTGGTAG+AGG | 0.583038 | 4_1:+79883198 | Msa0575900:CDS |
TGAGAAGGAAATTAACGCTA+CGG | 0.583709 | 4_1:+79882133 | Msa0575900:CDS |
ACGAAGGATCCTTCGATGAG+AGG | 0.584580 | 4_1:-79879726 | None:intergenic |
TGGATTTAGCTTCAAGACGA+AGG | 0.585923 | 4_1:-79879742 | None:intergenic |
GAGACTCTCAAGCTCGTGAA+GGG | 0.586687 | 4_1:-79879799 | None:intergenic |
GCCTCTCTTTCTGACTCAGG+GGG | 0.588765 | 4_1:+79882953 | Msa0575900:CDS |
GAGCTTGAGAGTCTCCTCCT+CGG | 0.589211 | 4_1:+79879807 | Msa0575900:CDS |
ATCAGGGTAAATTTCGAGGG+TGG | 0.589886 | 4_1:+79886717 | Msa0575900:intron |
TACGGAGTTGCTCGAGTGCG+CGG | 0.593714 | 4_1:-79879878 | None:intergenic |
AACTGTCAGCCATGGAAACA+CGG | 0.595606 | 4_1:+79888560 | Msa0575900:CDS |
AACCTTGTAACTGTCAGCCA+TGG | 0.596255 | 4_1:+79888552 | Msa0575900:CDS |
ACATAGACATACCTGGGTGA+AGG | 0.597397 | 4_1:-79880429 | None:intergenic |
GTCTGTTGTAATCATGGCAA+TGG | 0.599640 | 4_1:+79887147 | Msa0575900:CDS |
AGATAAAAGATTCTCCCCAA+TGG | 0.600265 | 4_1:+79880219 | Msa0575900:CDS |
TGCGCGGTGATCACCGAGGT+CGG | 0.600764 | 4_1:-79879862 | None:intergenic |
CAAGTGTTTGATTCATGTGG+TGG | 0.603057 | 4_1:+79886801 | Msa0575900:CDS |
GGCCTCTCTTTCTGACTCAG+GGG | 0.603484 | 4_1:+79882952 | Msa0575900:CDS |
GGCAAGAAAGACAAAGGGGT+GGG | 0.604531 | 4_1:-79879963 | None:intergenic |
AAGTGAACTGTCATCATCAC+CGG | 0.605146 | 4_1:-79883515 | None:intergenic |
AGCCAAACACAAACGCCCAT+CGG | 0.606519 | 4_1:-79879486 | None:intergenic |
AAGGATGAGGCTATAGTGGA+AGG | 0.608397 | 4_1:+79882230 | Msa0575900:CDS |
GGAAATTCAATTCAGTCAGA+GGG | 0.609137 | 4_1:-79879543 | None:intergenic |
CTTTGGCGGCGGAAGTAGAG+AGG | 0.611517 | 4_1:-79880025 | None:intergenic |
AGACAAGGAAGTATTCATGC+AGG | 0.616879 | 4_1:+79883415 | Msa0575900:CDS |
CAGCAATACTTTGATTACAG+AGG | 0.618364 | 4_1:+79882908 | Msa0575900:CDS |
AGATCGCTGTTTGTGATCGG+AGG | 0.620415 | 4_1:+79887594 | Msa0575900:CDS |
CAGGCGGGTCCTCTCATCGA+AGG | 0.621368 | 4_1:+79879717 | Msa0575900:CDS |
AATATTTGCAGCCCAAGACA+AGG | 0.622284 | 4_1:+79883400 | Msa0575900:CDS |
TTCTGAGGTGATTGAAACCG+AGG | 0.623898 | 4_1:-79880397 | None:intergenic |
CAAGATGGAAGAAGCTCGGG+AGG | 0.625541 | 4_1:+79886595 | Msa0575900:CDS |
ATCAATAGTGGTCAATGGTG+AGG | 0.628113 | 4_1:-79883104 | None:intergenic |
AGTGACCAAACTTCTAAGCA+GGG | 0.628456 | 4_1:+79883469 | Msa0575900:CDS |
CAAGTTCGTCGAAGATCAGG+CGG | 0.631427 | 4_1:+79879701 | Msa0575900:CDS |
TAATTACCAAATAAAGACGT+AGG | 0.635661 | 4_1:+79879427 | Msa0575900:five_prime_UTR |
GATGAACATCTTACTACCAA+AGG | 0.635683 | 4_1:-79888684 | None:intergenic |
TATATCTCCAAATCAACATG+AGG | 0.635755 | 4_1:+79883375 | Msa0575900:CDS |
ATGCTCTAACTACTCTGCGA+GGG | 0.637097 | 4_1:+79881627 | Msa0575900:CDS |
CTTCAATTTCAGAGAGCCTG+GGG | 0.641012 | 4_1:-79888583 | None:intergenic |
TTGAAGGTTCTTGAGCTCAG+AGG | 0.643648 | 4_1:+79879996 | Msa0575900:CDS |
AAGTTCGTCGAAGATCAGGC+GGG | 0.643898 | 4_1:+79879702 | Msa0575900:CDS |
CAGCATATATCAGTATGCAA+TGG | 0.644414 | 4_1:+79887119 | Msa0575900:CDS |
TTTGGCAACCAAATATGCGG+TGG | 0.649374 | 4_1:+79887087 | Msa0575900:CDS |
AACACTTGCTCCCTTCACCC+AGG | 0.649406 | 4_1:+79880418 | Msa0575900:CDS |
TTTGATTTATATCCACGCAG+TGG | 0.649964 | 4_1:+79888839 | Msa0575900:three_prime_UTR |
ATACAAGTGTTTGATTCATG+TGG | 0.653820 | 4_1:+79886798 | Msa0575900:CDS |
CATACAAATAAGGAGCAACA+TGG | 0.656778 | 4_1:+79882773 | Msa0575900:CDS |
AATGATAATCGGTTCCATTG+GGG | 0.662162 | 4_1:-79880233 | None:intergenic |
AGGCAAGAAAGACAAAGGGG+TGG | 0.669694 | 4_1:-79879964 | None:intergenic |
GCGCACTCGAGCAACTCCGT+AGG | 0.673194 | 4_1:+79879880 | Msa0575900:CDS |
GTAGGCACGAAGGTAATCGA+CGG | 0.673839 | 4_1:-79879835 | None:intergenic |
GATGAGGCTATAGTGGAAGG+TGG | 0.673855 | 4_1:+79882233 | Msa0575900:CDS |
AATGCTCTAACTACTCTGCG+AGG | 0.675894 | 4_1:+79881626 | Msa0575900:CDS |
GCAAGACAGAAACAACCTTG+AGG | 0.679419 | 4_1:-79879923 | None:intergenic |
TTTCCTCTACCAAGTTATGG+CGG | 0.684050 | 4_1:-79883201 | None:intergenic |
TGAAAAGAACAACCACTGCG+TGG | 0.688254 | 4_1:-79888851 | None:intergenic |
GGTCGGAGACGTAGGCACGA+AGG | 0.689478 | 4_1:-79879845 | None:intergenic |
TGAAGGGAGCAAGTGTTCTG+AGG | 0.689674 | 4_1:-79880412 | None:intergenic |
ATCACCGAGGTCGGAGACGT+AGG | 0.690430 | 4_1:-79879853 | None:intergenic |
GGGGTGGGATCCCTAACGGG+AGG | 0.699679 | 4_1:-79879948 | None:intergenic |
GGCACGAAGGTAATCGACGG+GGG | 0.701031 | 4_1:-79879832 | None:intergenic |
GAATGAAATTCAAAATAACG+AGG | 0.707476 | 4_1:+79882556 | Msa0575900:CDS |
TCTTCTCGAGAGTATGCCTG+AGG | 0.707514 | 4_1:-79880058 | None:intergenic |
AAAAGGCAAGAAAGACAAAG+GGG | 0.707749 | 4_1:-79879967 | None:intergenic |
TGAGGGAAGTGAGAAGACGA+AGG | 0.713074 | 4_1:-79879905 | None:intergenic |
TTGTTTGGCAACCAAATATG+CGG | 0.718261 | 4_1:+79887084 | Msa0575900:CDS |
AGGCACGAAGGTAATCGACG+GGG | 0.740426 | 4_1:-79879833 | None:intergenic |
TCTGTAATATGGAGACACAG+AGG | 0.759709 | 4_1:-79887673 | None:intergenic |
GCCATATGGATCAATCAGTG+CGG | 0.760755 | 4_1:-79879642 | None:intergenic |
CGAGTGCGCGGTGATCACCG+AGG | 0.768534 | 4_1:-79879866 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTACATTTTAACTTTA+TGG | + | chr4_1:79884017-79884036 | Msa0575900:intron | 10.0% |
!! | ATAAATGTAAAAATGATAAA+AGG | - | chr4_1:79884052-79884071 | None:intergenic | 10.0% |
!!! | TTTGAAATTTTTTATACTTT+TGG | - | chr4_1:79884451-79884470 | None:intergenic | 10.0% |
!!! | TATATCATAATACATTATTT+TGG | + | chr4_1:79886179-79886198 | Msa0575900:intron | 10.0% |
!! | AAAATAATTTATTTGTGTTT+GGG | - | chr4_1:79886281-79886300 | None:intergenic | 10.0% |
!! | AAAAATAATTTATTTGTGTT+TGG | - | chr4_1:79886282-79886301 | None:intergenic | 10.0% |
!! | TTTAAAAAATTAATACAGAA+AGG | - | chr4_1:79886309-79886328 | None:intergenic | 10.0% |
!! | AATATATGCTTAATTTAAAA+GGG | - | chr4_1:79888419-79888438 | None:intergenic | 10.0% |
!! | ATTATTCATTCTTATTGTAT+AGG | + | chr4_1:79880160-79880179 | Msa0575900:intron | 15.0% |
!! | TTGTGATTACAAATTATTAT+GGG | + | chr4_1:79881070-79881089 | Msa0575900:intron | 15.0% |
!! | AAAATTGGAAATAATATTGT+AGG | - | chr4_1:79881690-79881709 | None:intergenic | 15.0% |
!! | TTTAAAAAGGCAAAAATAAA+AGG | - | chr4_1:79882072-79882091 | None:intergenic | 15.0% |
!!! | TTTTGTTATTCCTATATTTT+AGG | + | chr4_1:79883964-79883983 | Msa0575900:intron | 15.0% |
!!! | TTTGTTATTCCTATATTTTA+GGG | + | chr4_1:79883965-79883984 | Msa0575900:intron | 15.0% |
!!! | AAAACAAGTATCAAATTTTT+GGG | - | chr4_1:79884959-79884978 | None:intergenic | 15.0% |
!! | TCATTTACATAAAAATTACT+TGG | - | chr4_1:79885092-79885111 | None:intergenic | 15.0% |
!! | TATTCTTACAGAAATTAATA+TGG | - | chr4_1:79885711-79885730 | None:intergenic | 15.0% |
!! | TTCCATAAAATTATTTACAA+TGG | + | chr4_1:79885831-79885850 | Msa0575900:intron | 15.0% |
!! | TCCATAAAATTATTTACAAT+GGG | + | chr4_1:79885832-79885851 | Msa0575900:intron | 15.0% |
!! | ATAAGTATATGTTTGATATT+TGG | + | chr4_1:79886933-79886952 | Msa0575900:intron | 15.0% |
!! | AACATAAATCATAACTATAA+AGG | - | chr4_1:79886976-79886995 | None:intergenic | 15.0% |
!! | AAACTTTATAAAATATCTCT+TGG | + | chr4_1:79887312-79887331 | Msa0575900:intron | 15.0% |
!! | TTATAAACAATCAAAACAAA+TGG | + | chr4_1:79887778-79887797 | Msa0575900:intron | 15.0% |
!!! | TACACTTTTTTTCTTATATT+GGG | - | chr4_1:79887830-79887849 | None:intergenic | 15.0% |
!!! | ATACACTTTTTTTCTTATAT+TGG | - | chr4_1:79887831-79887850 | None:intergenic | 15.0% |
!!! | TTATTTAGTTCATTTTTAAG+AGG | - | chr4_1:79888004-79888023 | None:intergenic | 15.0% |
!!! | TTGATAATGCATAATTATTT+GGG | + | chr4_1:79888264-79888283 | Msa0575900:intron | 15.0% |
!! | ATATATGCTTAATTTAAAAG+GGG | - | chr4_1:79888418-79888437 | None:intergenic | 15.0% |
!! | CAATATATGCTTAATTTAAA+AGG | - | chr4_1:79888420-79888439 | None:intergenic | 15.0% |
!! | GATATAAATCAAAGAATTAA+AGG | - | chr4_1:79888832-79888851 | None:intergenic | 15.0% |
!!! | GTTTTAGATAAAACATTCTT+GGG | - | chr4_1:79880681-79880700 | None:intergenic | 20.0% |
!!! | TGTTTTAGATAAAACATTCT+TGG | - | chr4_1:79880682-79880701 | None:intergenic | 20.0% |
!! | AGAAAACTAGTTATATTTGA+CGG | + | chr4_1:79880701-79880720 | Msa0575900:intron | 20.0% |
!! | AGATTAAAAATGCAGTATTA+AGG | + | chr4_1:79880792-79880811 | Msa0575900:intron | 20.0% |
!! | TTTCTATTCAGAGTAATTTA+TGG | + | chr4_1:79880951-79880970 | Msa0575900:intron | 20.0% |
!! | GTTGTGATTACAAATTATTA+TGG | + | chr4_1:79881069-79881088 | Msa0575900:intron | 20.0% |
!! | CAAATTTATTGTTCTTAGAA+CGG | + | chr4_1:79881400-79881419 | Msa0575900:intron | 20.0% |
!!! | ATATTGTTAAACTTGTTTTG+AGG | + | chr4_1:79881600-79881619 | Msa0575900:CDS | 20.0% |
!!! | TAACTTGTGTAAGTTTAAAA+AGG | - | chr4_1:79882085-79882104 | None:intergenic | 20.0% |
!!! | AAATCTATTAGTTTCCTATT+TGG | + | chr4_1:79882404-79882423 | Msa0575900:intron | 20.0% |
!! | AGATGATTTGATTAATAAAG+TGG | + | chr4_1:79882610-79882629 | Msa0575900:CDS | 20.0% |
!! | GTAAAAATGATAAAAGGAAA+AGG | - | chr4_1:79884046-79884065 | None:intergenic | 20.0% |
!! | AAACTATAAGAGAAACTATT+AGG | + | chr4_1:79884731-79884750 | Msa0575900:intron | 20.0% |
!! | TAAGTTTGAGAGATTTAATA+TGG | - | chr4_1:79884923-79884942 | None:intergenic | 20.0% |
!!! | CAAAACAAGTATCAAATTTT+TGG | - | chr4_1:79884960-79884979 | None:intergenic | 20.0% |
!! | AAATATTTAACAACAATCTC+TGG | - | chr4_1:79885140-79885159 | None:intergenic | 20.0% |
!!! | ACCCATTGTAAATAATTTTA+TGG | - | chr4_1:79885836-79885855 | None:intergenic | 20.0% |
!!! | ATGAATAAAAGAGTGTATTA+TGG | - | chr4_1:79886156-79886175 | None:intergenic | 20.0% |
!!! | TCATTTTTCAATCTGAAAAA+CGG | - | chr4_1:79886411-79886430 | None:intergenic | 20.0% |
!!! | CTATTTTGTTGAAATAAACA+AGG | - | chr4_1:79886477-79886496 | None:intergenic | 20.0% |
!! | ATTAATAATTTACAAGGGAA+AGG | - | chr4_1:79886859-79886878 | None:intergenic | 20.0% |
!! | TCCCTTGTAAATTATTAATT+TGG | + | chr4_1:79886860-79886879 | Msa0575900:intron | 20.0% |
!! | CCCAAATTAATAATTTACAA+GGG | - | chr4_1:79886864-79886883 | None:intergenic | 20.0% |
!! | CCCTTGTAAATTATTAATTT+GGG | + | chr4_1:79886861-79886880 | Msa0575900:intron | 20.0% |
!! | ACCCAAATTAATAATTTACA+AGG | - | chr4_1:79886865-79886884 | None:intergenic | 20.0% |
!!! | TTGTAAATTATTAATTTGGG+TGG | + | chr4_1:79886864-79886883 | Msa0575900:intron | 20.0% |
!! | AGGAAAAAATGAAAATAGAA+AGG | - | chr4_1:79887004-79887023 | None:intergenic | 20.0% |
!! | TTTAGTAGAACAGAATAAAA+AGG | - | chr4_1:79887209-79887228 | None:intergenic | 20.0% |
!! | TAATTTAATCTCGAAGATAA+AGG | - | chr4_1:79887270-79887289 | None:intergenic | 20.0% |
!!! | TCAGAAATTGTTTTCTTATA+TGG | + | chr4_1:79887362-79887381 | Msa0575900:intron | 20.0% |
!!! | GTTTAGTTGATAATAACTTT+GGG | + | chr4_1:79887404-79887423 | Msa0575900:intron | 20.0% |
!!! | TTTTGATTGTTTATAATGTC+AGG | - | chr4_1:79887774-79887793 | None:intergenic | 20.0% |
!!! | AGAAAAAAAGTGTATATGTT+TGG | + | chr4_1:79887836-79887855 | Msa0575900:intron | 20.0% |
!! | ATAATTATGCATTATCAACA+AGG | - | chr4_1:79888262-79888281 | None:intergenic | 20.0% |
!!! | GTTGATAATGCATAATTATT+TGG | + | chr4_1:79888263-79888282 | Msa0575900:intron | 20.0% |
!! | TATATGCTTAATTTAAAAGG+GGG | - | chr4_1:79888417-79888436 | None:intergenic | 20.0% |
! | TAATTACCAAATAAAGACGT+AGG | + | chr4_1:79879427-79879446 | Msa0575900:five_prime_UTR | 25.0% |
!! | ACGTATCGATCAATTTAATA+TGG | + | chr4_1:79879578-79879597 | Msa0575900:five_prime_UTR | 25.0% |
! | AGAGAGATGATGATAATAAT+CGG | - | chr4_1:79879609-79879628 | None:intergenic | 25.0% |
! | CTCCATATTTCACATAAATT+AGG | + | chr4_1:79880477-79880496 | Msa0575900:intron | 25.0% |
! | AGCCTAATTTATGTGAAATA+TGG | - | chr4_1:79880482-79880501 | None:intergenic | 25.0% |
! | ACTAATAGTATACTCAATGA+AGG | - | chr4_1:79880589-79880608 | None:intergenic | 25.0% |
! | GAGTATACTATTAGTTACAT+TGG | + | chr4_1:79880594-79880613 | Msa0575900:intron | 25.0% |
! | ACTATTAGTTACATTGGATA+TGG | + | chr4_1:79880600-79880619 | Msa0575900:intron | 25.0% |
!! | ACCTAATAGATTATGCTTTT+GGG | - | chr4_1:79880648-79880667 | None:intergenic | 25.0% |
! | AGTTATATATTGCCTATGAT+GGG | - | chr4_1:79880828-79880847 | None:intergenic | 25.0% |
! | AAGTTATATATTGCCTATGA+TGG | - | chr4_1:79880829-79880848 | None:intergenic | 25.0% |
! | CATGTTGATCAAATCATATA+AGG | + | chr4_1:79881132-79881151 | Msa0575900:intron | 25.0% |
! | TGGTGAAATTAATGAAACTT+GGG | - | chr4_1:79881255-79881274 | None:intergenic | 25.0% |
!!! | ATCTAAAACTTACCTTTTCT+GGG | - | chr4_1:79881826-79881845 | None:intergenic | 25.0% |
!!! | TATCTAAAACTTACCTTTTC+TGG | - | chr4_1:79881827-79881846 | None:intergenic | 25.0% |
! | GAAATACTTCAGAAATCAAA+TGG | - | chr4_1:79882021-79882040 | None:intergenic | 25.0% |
! | ACTTCAACTGATCAAAATAA+AGG | - | chr4_1:79882109-79882128 | None:intergenic | 25.0% |
! | GAATGAAATTCAAAATAACG+AGG | + | chr4_1:79882556-79882575 | Msa0575900:CDS | 25.0% |
!!! | TGAGAATTTTTAGATTGTGA+GGG | - | chr4_1:79883031-79883050 | None:intergenic | 25.0% |
!!! | ATGAGAATTTTTAGATTGTG+AGG | - | chr4_1:79883032-79883051 | None:intergenic | 25.0% |
!! | ACCACTATTGATGATATAAA+TGG | + | chr4_1:79883115-79883134 | Msa0575900:CDS | 25.0% |
!! | CCACTATTGATGATATAAAT+GGG | + | chr4_1:79883116-79883135 | Msa0575900:CDS | 25.0% |
!! | CATTCACGTGATTTTTATAT+GGG | - | chr4_1:79883339-79883358 | None:intergenic | 25.0% |
! | CATATAAAAATCACGTGAAT+GGG | + | chr4_1:79883338-79883357 | Msa0575900:CDS | 25.0% |
!!! | ATATTTTCCTCATGTTGATT+TGG | - | chr4_1:79883385-79883404 | None:intergenic | 25.0% |
! | CAAAATGGCATTTGTTTATT+TGG | + | chr4_1:79883439-79883458 | Msa0575900:CDS | 25.0% |
! | TATTGAAATAACTCTCTTCT+TGG | - | chr4_1:79883593-79883612 | None:intergenic | 25.0% |
! | GATAAAATCATCATTCTCTT+GGG | - | chr4_1:79883749-79883768 | None:intergenic | 25.0% |
! | ATTTGAGTGGAAAAATCAAA+TGG | + | chr4_1:79883902-79883921 | Msa0575900:intron | 25.0% |
! | TCTCATCTTCAAAAAGAAAT+TGG | + | chr4_1:79884170-79884189 | Msa0575900:intron | 25.0% |
! | CTCATCTTCAAAAAGAAATT+GGG | + | chr4_1:79884171-79884190 | Msa0575900:intron | 25.0% |
! | TCATCTTCAAAAAGAAATTG+GGG | + | chr4_1:79884172-79884191 | Msa0575900:intron | 25.0% |
! | TGTAATCAATAGATAACTAC+AGG | - | chr4_1:79884329-79884348 | None:intergenic | 25.0% |
! | TTAGCTATTAATCAAGTAAG+TGG | + | chr4_1:79884488-79884507 | Msa0575900:intron | 25.0% |
!! | TATACCATCTTTTCTACTAT+AGG | - | chr4_1:79884600-79884619 | None:intergenic | 25.0% |
!! | GTTTCTCTTATAGTTTTTCT+AGG | - | chr4_1:79884727-79884746 | None:intergenic | 25.0% |
! | TAATGAGTTTGATCCAAATT+TGG | + | chr4_1:79884768-79884787 | Msa0575900:intron | 25.0% |
! | GTTCTATCATAAACCAAATT+TGG | - | chr4_1:79884784-79884803 | None:intergenic | 25.0% |
! | TGGTTTATGATAGAACATTA+TGG | + | chr4_1:79884788-79884807 | Msa0575900:intron | 25.0% |
!!! | ATATGGTTTTTAAGTCATCT+GGG | - | chr4_1:79884906-79884925 | None:intergenic | 25.0% |
!!! | AATATGGTTTTTAAGTCATC+TGG | - | chr4_1:79884907-79884926 | None:intergenic | 25.0% |
! | CAAGATATTGTTAAATCTTC+TGG | + | chr4_1:79885206-79885225 | Msa0575900:intron | 25.0% |
! | AAGAGTTTCATGATAACAAA+AGG | + | chr4_1:79885264-79885283 | Msa0575900:intron | 25.0% |
! | AAAAGTAAGAATCTTGTAAG+CGG | - | chr4_1:79885304-79885323 | None:intergenic | 25.0% |
!!! | ATCATTTCAAGTGTTTGTTT+TGG | - | chr4_1:79885427-79885446 | None:intergenic | 25.0% |
! | TTGTCATTAGTACATTCATT+TGG | + | chr4_1:79885667-79885686 | Msa0575900:intron | 25.0% |
! | AGAAATTAATATGGTAAGCA+TGG | - | chr4_1:79885702-79885721 | None:intergenic | 25.0% |
!!! | GTGCTTTAGTTTTGAATTTT+AGG | + | chr4_1:79885771-79885790 | Msa0575900:intron | 25.0% |
!! | TTGTTTTCACAAAACACAAA+TGG | - | chr4_1:79885809-79885828 | None:intergenic | 25.0% |
! | TATATGAATGGTTGTATTGA+GGG | - | chr4_1:79885887-79885906 | None:intergenic | 25.0% |
! | CAAGATTTACATAATAATCC+AGG | + | chr4_1:79885913-79885932 | Msa0575900:intron | 25.0% |
! | AGAAGAGAAAATCATAAAAG+AGG | + | chr4_1:79885945-79885964 | Msa0575900:intron | 25.0% |
!!! | TCAACTATCAAGTTTGTTTT+CGG | - | chr4_1:79886050-79886069 | None:intergenic | 25.0% |
! | GGTAAGGTAAAATCATTTAA+GGG | - | chr4_1:79886215-79886234 | None:intergenic | 25.0% |
! | ATCTGAAAAACGGATATAAT+GGG | - | chr4_1:79886401-79886420 | None:intergenic | 25.0% |
! | AATCTGAAAAACGGATATAA+TGG | - | chr4_1:79886402-79886421 | None:intergenic | 25.0% |
! | TCTATGTTGTTGAATAATAC+AGG | - | chr4_1:79886449-79886468 | None:intergenic | 25.0% |
!!! | AAGTAGTAAGTTTTTAACTG+TGG | + | chr4_1:79886682-79886701 | Msa0575900:intron | 25.0% |
!! | TTTTTCCTTCTATAATAGAC+TGG | + | chr4_1:79887016-79887035 | Msa0575900:intron | 25.0% |
!! | TTTTCCTTCTATAATAGACT+GGG | + | chr4_1:79887017-79887036 | Msa0575900:intron | 25.0% |
!!! | CGTTTAGTTGATAATAACTT+TGG | + | chr4_1:79887403-79887422 | Msa0575900:intron | 25.0% |
! | ATTCTTAATTGTACTGGATA+TGG | + | chr4_1:79887449-79887468 | Msa0575900:intron | 25.0% |
!! | TTCTATTAGCTATTAGTTTG+CGG | + | chr4_1:79887522-79887541 | Msa0575900:intron | 25.0% |
!!! | TGAGATGGTAAGTATTTTTT+GGG | + | chr4_1:79887728-79887747 | Msa0575900:intron | 25.0% |
!!! | AAATGGATTTTCAATTCATG+AGG | + | chr4_1:79887795-79887814 | Msa0575900:intron | 25.0% |
!!! | AGTTCATTTTTAAGAGGAAA+TGG | - | chr4_1:79887998-79888017 | None:intergenic | 25.0% |
!!! | TTTAAGTTTTGTTTAGTTGG+AGG | - | chr4_1:79888074-79888093 | None:intergenic | 25.0% |
!!! | AGCTTTAAGTTTTGTTTAGT+TGG | - | chr4_1:79888077-79888096 | None:intergenic | 25.0% |
! | AAACTTCAAAAGGTTATCTT+TGG | - | chr4_1:79888622-79888641 | None:intergenic | 25.0% |
!!! | TTCTTTTTTCTTTTCCTTTC+TGG | + | chr4_1:79888761-79888780 | Msa0575900:three_prime_UTR | 25.0% |
TAAATTGATCGATACGTGTA+CGG | - | chr4_1:79879575-79879594 | None:intergenic | 30.0% | |
TTATTGTATAGGATGCTCTT+CGG | + | chr4_1:79880171-79880190 | Msa0575900:intron | 30.0% | |
CACAAGATACGAATGATAAT+CGG | - | chr4_1:79880247-79880266 | None:intergenic | 30.0% | |
AGGAAAAATCTAAATCCAGA+CGG | - | chr4_1:79880559-79880578 | None:intergenic | 30.0% | |
AATAGTATACTCAATGAAGG+TGG | - | chr4_1:79880586-79880605 | None:intergenic | 30.0% | |
! | CCTAATAGATTATGCTTTTG+GGG | - | chr4_1:79880647-79880666 | None:intergenic | 30.0% |
! | CACCTAATAGATTATGCTTT+TGG | - | chr4_1:79880649-79880668 | None:intergenic | 30.0% |
AACTAGTTATATTTGACGGA+TGG | + | chr4_1:79880705-79880724 | Msa0575900:intron | 30.0% | |
TAGTCTAAATGCTCACAATA+TGG | + | chr4_1:79880975-79880994 | Msa0575900:intron | 30.0% | |
TAATTCGATTCTTGCAGAAT+TGG | + | chr4_1:79881012-79881031 | Msa0575900:intron | 30.0% | |
TCAGCACAAGTTGTAAATAT+AGG | + | chr4_1:79881036-79881055 | Msa0575900:intron | 30.0% | |
GGTGAAATTAATGAAACTTG+GGG | - | chr4_1:79881254-79881273 | None:intergenic | 30.0% | |
CTGGTGAAATTAATGAAACT+TGG | - | chr4_1:79881256-79881275 | None:intergenic | 30.0% | |
!! | ACATGGATTGACTGATATTT+TGG | + | chr4_1:79881344-79881363 | Msa0575900:intron | 30.0% |
ACTTTGAGTACTTAAATGTG+AGG | + | chr4_1:79881459-79881478 | Msa0575900:intron | 30.0% | |
GAGGAAAGCAAATTATTTGT+AGG | + | chr4_1:79881478-79881497 | Msa0575900:intron | 30.0% | |
ATCCAACAAAATAGGTATGT+GGG | - | chr4_1:79881563-79881582 | None:intergenic | 30.0% | |
!! | AAACTCTAGCTCTGAAAAAT+TGG | - | chr4_1:79881705-79881724 | None:intergenic | 30.0% |
TTCTGAATCTAAAAAGCTTG+TGG | + | chr4_1:79881735-79881754 | Msa0575900:CDS | 30.0% | |
! | AGCATTGAGTGGAAAAAAAA+TGG | - | chr4_1:79881948-79881967 | None:intergenic | 30.0% |
ATCAAATGGCATCTAAATAG+AGG | - | chr4_1:79882007-79882026 | None:intergenic | 30.0% | |
! | AAATTAACGCTACGGATTTT+TGG | + | chr4_1:79882141-79882160 | Msa0575900:CDS | 30.0% |
!! | GAATTATTTGTTATGCACCT+CGG | + | chr4_1:79882318-79882337 | Msa0575900:intron | 30.0% |
! | GATCATTTAAAACAAAACCG+AGG | - | chr4_1:79882338-79882357 | None:intergenic | 30.0% |
CTGAAAAATCAGTAGAAACT+TGG | + | chr4_1:79882699-79882718 | Msa0575900:CDS | 30.0% | |
TCAGTAGAAACTTGGAAAAA+AGG | + | chr4_1:79882707-79882726 | Msa0575900:CDS | 30.0% | |
! | TCCTTATTTGTATGGTTTCT+GGG | - | chr4_1:79882767-79882786 | None:intergenic | 30.0% |
! | TTTCAAATCCTTTTCACTTC+AGG | + | chr4_1:79882991-79883010 | Msa0575900:CDS | 30.0% |
! | TTCAAATCCTTTTCACTTCA+GGG | + | chr4_1:79882992-79883011 | Msa0575900:CDS | 30.0% |
ATTAATTCCCTGAAGTGAAA+AGG | - | chr4_1:79883002-79883021 | None:intergenic | 30.0% | |
!! | AGAATTTTTAGATTGTGAGG+GGG | - | chr4_1:79883029-79883048 | None:intergenic | 30.0% |
!! | GAGAATTTTTAGATTGTGAG+GGG | - | chr4_1:79883030-79883049 | None:intergenic | 30.0% |
ATATCATCAATAGTGGTCAA+TGG | - | chr4_1:79883112-79883131 | None:intergenic | 30.0% | |
CCCATTTATATCATCAATAG+TGG | - | chr4_1:79883119-79883138 | None:intergenic | 30.0% | |
AAATTTCCTCTACCAAGTTA+TGG | - | chr4_1:79883207-79883226 | None:intergenic | 30.0% | |
! | CCATTCACGTGATTTTTATA+TGG | - | chr4_1:79883340-79883359 | None:intergenic | 30.0% |
CCATATAAAAATCACGTGAA+TGG | + | chr4_1:79883337-79883356 | Msa0575900:CDS | 30.0% | |
TATATCTCCAAATCAACATG+AGG | + | chr4_1:79883375-79883394 | Msa0575900:CDS | 30.0% | |
!!! | AGCCAACAAACTGATTTTTT+CGG | + | chr4_1:79883544-79883563 | Msa0575900:CDS | 30.0% |
GACAGATTACAGCAAATTTA+AGG | + | chr4_1:79883671-79883690 | Msa0575900:CDS | 30.0% | |
! | ATGATTTCGCTGAATTTTGT+TGG | + | chr4_1:79883710-79883729 | Msa0575900:CDS | 30.0% |
CGATAAAATCATCATTCTCT+TGG | - | chr4_1:79883750-79883769 | None:intergenic | 30.0% | |
ATAATGATTACAGCCTTCAT+TGG | - | chr4_1:79883809-79883828 | None:intergenic | 30.0% | |
GACTTGTATCCCTAAAATAT+AGG | - | chr4_1:79883977-79883996 | None:intergenic | 30.0% | |
ATCATATGTGATTATGTGAG+AGG | - | chr4_1:79884263-79884282 | None:intergenic | 30.0% | |
CAAAGAGTTGCAAAAATATC+TGG | + | chr4_1:79884363-79884382 | Msa0575900:intron | 30.0% | |
!!! | TATGGTTTTTAAGTCATCTG+GGG | - | chr4_1:79884905-79884924 | None:intergenic | 30.0% |
AATCTCTCAAACTTAACCTT+TGG | + | chr4_1:79884928-79884947 | Msa0575900:intron | 30.0% | |
ATCTCTCAAACTTAACCTTT+GGG | + | chr4_1:79884929-79884948 | Msa0575900:intron | 30.0% | |
! | TGCATCTTAACCAAACTTTT+GGG | - | chr4_1:79885369-79885388 | None:intergenic | 30.0% |
! | ATGCATCTTAACCAAACTTT+TGG | - | chr4_1:79885370-79885389 | None:intergenic | 30.0% |
TTAAGATGCATTACTGGTAT+CGG | + | chr4_1:79885379-79885398 | Msa0575900:intron | 30.0% | |
!! | AAATCAAGTGCTGAATAATG+TGG | - | chr4_1:79885471-79885490 | None:intergenic | 30.0% |
! | CTAATTAATGTTGCTTCTGA+TGG | + | chr4_1:79885588-79885607 | Msa0575900:CDS | 30.0% |
GTATATGAATGGTTGTATTG+AGG | - | chr4_1:79885888-79885907 | None:intergenic | 30.0% | |
ATCTTGTGCATGTATATGAA+TGG | - | chr4_1:79885899-79885918 | None:intergenic | 30.0% | |
TTCTCTTCTATAAACTTTCC+TGG | - | chr4_1:79885934-79885953 | None:intergenic | 30.0% | |
!! | TTGGAAAGTATCACCTATTT+GGG | - | chr4_1:79885997-79886016 | None:intergenic | 30.0% |
GGGTAAGGTAAAATCATTTA+AGG | - | chr4_1:79886216-79886235 | None:intergenic | 30.0% | |
TAATCCTTGTTCAAAGTTAG+AGG | - | chr4_1:79886370-79886389 | None:intergenic | 30.0% | |
!! | GTTTTTAACTGTGGTTCTTT+TGG | + | chr4_1:79886691-79886710 | Msa0575900:intron | 30.0% |
CAATGCTTCTTGTTACAAAA+AGG | - | chr4_1:79886752-79886771 | None:intergenic | 30.0% | |
ACATGAATCAAACACTTGTA+TGG | - | chr4_1:79886799-79886818 | None:intergenic | 30.0% | |
ATACAAGTGTTTGATTCATG+TGG | + | chr4_1:79886798-79886817 | Msa0575900:CDS | 30.0% | |
ATTCTAGATGCTCAATAAGA+AGG | + | chr4_1:79886826-79886845 | Msa0575900:CDS | 30.0% | |
TTTCCTTCTATAATAGACTG+GGG | + | chr4_1:79887018-79887037 | Msa0575900:intron | 30.0% | |
!!! | TGGGGTTTTGGAAATTTAAA+TGG | + | chr4_1:79887036-79887055 | Msa0575900:intron | 30.0% |
TGGAAATTTAAATGGCAGTT+TGG | + | chr4_1:79887044-79887063 | Msa0575900:intron | 30.0% | |
!! | AGTTGATAATAACTTTGGGA+AGG | + | chr4_1:79887408-79887427 | Msa0575900:intron | 30.0% |
GTCTTCAATTGAAATTTGCA+AGG | + | chr4_1:79887487-79887506 | Msa0575900:intron | 30.0% | |
TTACACTTACAGAAGAATCA+TGG | + | chr4_1:79887565-79887584 | Msa0575900:intron | 30.0% | |
! | CATGAATCGATTCTGTAATA+TGG | - | chr4_1:79887687-79887706 | None:intergenic | 30.0% |
!!! | CTGAGATGGTAAGTATTTTT+TGG | + | chr4_1:79887727-79887746 | Msa0575900:intron | 30.0% |
!!! | GAGATGGTAAGTATTTTTTG+GGG | + | chr4_1:79887729-79887748 | Msa0575900:intron | 30.0% |
! | TTTTCAATTCATGAGGTGAT+AGG | + | chr4_1:79887802-79887821 | Msa0575900:intron | 30.0% |
! | AGTGTATATGTTTGGTTCAA+TGG | + | chr4_1:79887844-79887863 | Msa0575900:intron | 30.0% |
TAAATTGTGGAAATTCTGAG+GGG | - | chr4_1:79887954-79887973 | None:intergenic | 30.0% | |
CTAAATTGTGGAAATTCTGA+GGG | - | chr4_1:79887955-79887974 | None:intergenic | 30.0% | |
AGAATTTCCACAATTTAGGA+GGG | + | chr4_1:79887957-79887976 | Msa0575900:intron | 30.0% | |
GAAAATAGAAAGAAAGTGAG+GGG | - | chr4_1:79888052-79888071 | None:intergenic | 30.0% | |
GGAAAATAGAAAGAAAGTGA+GGG | - | chr4_1:79888053-79888072 | None:intergenic | 30.0% | |
AGGAAAATAGAAAGAAAGTG+AGG | - | chr4_1:79888054-79888073 | None:intergenic | 30.0% | |
ATTATGCATTATCAACAAGG+AGG | - | chr4_1:79888259-79888278 | None:intergenic | 30.0% | |
!! | TTTGATTTGATTCGTACCGA+TGG | + | chr4_1:79879470-79879489 | Msa0575900:five_prime_UTR | 35.0% |
! | TTGATTTGATTCGTACCGAT+GGG | + | chr4_1:79879471-79879490 | Msa0575900:five_prime_UTR | 35.0% |
GGAAATTCAATTCAGTCAGA+GGG | - | chr4_1:79879546-79879565 | None:intergenic | 35.0% | |
TGGAAATTCAATTCAGTCAG+AGG | - | chr4_1:79879547-79879566 | None:intergenic | 35.0% | |
AAAAGGCAAGAAAGACAAAG+GGG | - | chr4_1:79879970-79879989 | None:intergenic | 35.0% | |
CAAAAGGCAAGAAAGACAAA+GGG | - | chr4_1:79879971-79879990 | None:intergenic | 35.0% | |
! | CTTTGTCTTTCTTGCCTTTT+GGG | + | chr4_1:79879970-79879989 | Msa0575900:CDS | 35.0% |
! | TTGGGGAGAATCTTTTATCT+CGG | - | chr4_1:79880219-79880238 | None:intergenic | 35.0% |
AGATAAAAGATTCTCCCCAA+TGG | + | chr4_1:79880219-79880238 | Msa0575900:CDS | 35.0% | |
! | AATGATAATCGGTTCCATTG+GGG | - | chr4_1:79880236-79880255 | None:intergenic | 35.0% |
! | GAATGATAATCGGTTCCATT+GGG | - | chr4_1:79880237-79880256 | None:intergenic | 35.0% |
! | CTGTACCAAATTGAAGCATT+TGG | + | chr4_1:79880373-79880392 | Msa0575900:CDS | 35.0% |
! | AAATTGAAGCATTTGGACCT+CGG | + | chr4_1:79880380-79880399 | Msa0575900:CDS | 35.0% |
! | ATAATTTTATCCTTCCCGTC+TGG | + | chr4_1:79880541-79880560 | Msa0575900:intron | 35.0% |
GGAAAAATCTAAATCCAGAC+GGG | - | chr4_1:79880558-79880577 | None:intergenic | 35.0% | |
!! | ACATTGGATATGGTTTTGCA+AGG | + | chr4_1:79880610-79880629 | Msa0575900:intron | 35.0% |
! | CCCCAAAAGCATAATCTATT+AGG | + | chr4_1:79880644-79880663 | Msa0575900:intron | 35.0% |
AAGAATGTCTGACAATGACA+TGG | + | chr4_1:79881094-79881113 | Msa0575900:intron | 35.0% | |
ACAGCCAATTATGGAAAGTT+GGG | - | chr4_1:79881214-79881233 | None:intergenic | 35.0% | |
AAAGAGACGACTCTTCAATT+AGG | - | chr4_1:79881426-79881445 | None:intergenic | 35.0% | |
TTTCAGTTAGCCATTTGCTT+TGG | + | chr4_1:79881536-79881555 | Msa0575900:intron | 35.0% | |
TTCAGTTAGCCATTTGCTTT+GGG | + | chr4_1:79881537-79881556 | Msa0575900:intron | 35.0% | |
GATCCAACAAAATAGGTATG+TGG | - | chr4_1:79881564-79881583 | None:intergenic | 35.0% | |
! | GAGAATTTGAAGTCACTTGA+AGG | + | chr4_1:79881653-79881672 | Msa0575900:CDS | 35.0% |
GAATCTAAAAAGCTTGTGGA+TGG | + | chr4_1:79881739-79881758 | Msa0575900:CDS | 35.0% | |
! | AAAACTTACCTTTTCTGGGT+AGG | - | chr4_1:79881822-79881841 | None:intergenic | 35.0% |
ATGGCATCTAAATAGAGGTA+CGG | - | chr4_1:79882002-79882021 | None:intergenic | 35.0% | |
!!! | TGCGACATATTCAGCTTTTT+TGG | + | chr4_1:79882043-79882062 | Msa0575900:intron | 35.0% |
TCAGTTGAAGTTAGATGAGA+AGG | + | chr4_1:79882118-79882137 | Msa0575900:intron | 35.0% | |
TGAGAAGGAAATTAACGCTA+CGG | + | chr4_1:79882133-79882152 | Msa0575900:CDS | 35.0% | |
AGGTACATAAATCCCAAAAC+TGG | - | chr4_1:79882207-79882226 | None:intergenic | 35.0% | |
ATCGCTATGTAGATCCAAAT+AGG | - | chr4_1:79882421-79882440 | None:intergenic | 35.0% | |
! | TTGTTTTCTCAAGCAGAGAA+AGG | + | chr4_1:79882457-79882476 | Msa0575900:intron | 35.0% |
CACTAGTATATGTTCTGATC+AGG | + | chr4_1:79882517-79882536 | Msa0575900:CDS | 35.0% | |
GCTTCGTCATCAAATAAATC+AGG | - | chr4_1:79882584-79882603 | None:intergenic | 35.0% | |
!! | AGAAAGAGCGTTCTATTCTT+TGG | + | chr4_1:79882642-79882661 | Msa0575900:CDS | 35.0% |
GAAACTTGGAAAAAAGGAAG+AGG | + | chr4_1:79882713-79882732 | Msa0575900:CDS | 35.0% | |
ACCCAGAAACCATACAAATA+AGG | + | chr4_1:79882763-79882782 | Msa0575900:CDS | 35.0% | |
! | CTCCTTATTTGTATGGTTTC+TGG | - | chr4_1:79882768-79882787 | None:intergenic | 35.0% |
! | CATGTTGCTCCTTATTTGTA+TGG | - | chr4_1:79882775-79882794 | None:intergenic | 35.0% |
CATACAAATAAGGAGCAACA+TGG | + | chr4_1:79882773-79882792 | Msa0575900:CDS | 35.0% | |
CAGCAATACTTTGATTACAG+AGG | + | chr4_1:79882908-79882927 | Msa0575900:CDS | 35.0% | |
TTTGATTACAGAGGATCTCT+TGG | + | chr4_1:79882917-79882936 | Msa0575900:CDS | 35.0% | |
!! | AGAAGGTCTTTTTGAAAGTG+AGG | - | chr4_1:79883175-79883194 | None:intergenic | 35.0% |
CATGAATACTTCCTTGTCTT+GGG | - | chr4_1:79883414-79883433 | None:intergenic | 35.0% | |
AGTATTCATGCAGGACAAAA+TGG | + | chr4_1:79883424-79883443 | Msa0575900:CDS | 35.0% | |
!!! | GCCAACAAACTGATTTTTTC+GGG | + | chr4_1:79883545-79883564 | Msa0575900:CDS | 35.0% |
TCCCGAAAAAATCAGTTTGT+TGG | - | chr4_1:79883549-79883568 | None:intergenic | 35.0% | |
GAGAATGCAAACATCAATTC+AGG | + | chr4_1:79883619-79883638 | Msa0575900:CDS | 35.0% | |
GAACAAGAGCAGATAAATCA+AGG | + | chr4_1:79883649-79883668 | Msa0575900:CDS | 35.0% | |
TGGAGACAAACTACAAAGAA+AGG | + | chr4_1:79883854-79883873 | Msa0575900:CDS | 35.0% | |
TTCACTTTATGCAGTTCTGT+TGG | + | chr4_1:79883932-79883951 | Msa0575900:intron | 35.0% | |
! | TTTATGCAGTTCTGTTGGTT+AGG | + | chr4_1:79883937-79883956 | Msa0575900:intron | 35.0% |
AGGTTAAACACTCAATGAGT+AGG | - | chr4_1:79884243-79884262 | None:intergenic | 35.0% | |
TAGATAACTACAGGAAAGAC+TGG | - | chr4_1:79884320-79884339 | None:intergenic | 35.0% | |
GATTAGTGGTAAGACTAGAA+GGG | + | chr4_1:79884530-79884549 | Msa0575900:intron | 35.0% | |
AGCACCTATAGTAGAAAAGA+TGG | + | chr4_1:79884593-79884612 | Msa0575900:intron | 35.0% | |
AGTATGAAGAGTAGATCAGA+TGG | + | chr4_1:79884669-79884688 | Msa0575900:intron | 35.0% | |
!!! | AAATTTTTGGGTACACCCAA+AGG | - | chr4_1:79884947-79884966 | None:intergenic | 35.0% |
! | CAACAATCTCTGGAAAGAAT+CGG | - | chr4_1:79885130-79885149 | None:intergenic | 35.0% |
AAGAATCTTGTAAGCGGAAA+TGG | - | chr4_1:79885298-79885317 | None:intergenic | 35.0% | |
!! | TTAACCAAACTTTTGGGTGA+AGG | - | chr4_1:79885363-79885382 | None:intergenic | 35.0% |
GTTTGGTTAAGATGCATTAC+TGG | + | chr4_1:79885373-79885392 | Msa0575900:intron | 35.0% | |
! | AGTGCTGAATAATGTGGATA+GGG | - | chr4_1:79885465-79885484 | None:intergenic | 35.0% |
!! | AAGTGCTGAATAATGTGGAT+AGG | - | chr4_1:79885466-79885485 | None:intergenic | 35.0% |
!!! | TTTTTTTGTGTGTTCCTCTG+TGG | + | chr4_1:79885488-79885507 | Msa0575900:intron | 35.0% |
AGAAATTAAACATGCCACAG+AGG | - | chr4_1:79885505-79885524 | None:intergenic | 35.0% | |
CTAACAAAAGAGAAACGCAA+TGG | - | chr4_1:79885625-79885644 | None:intergenic | 35.0% | |
! | GTTTCTCTTTTGTTAGCACA+AGG | + | chr4_1:79885629-79885648 | Msa0575900:intron | 35.0% |
ACAAAATACTCTCCCCAAAT+AGG | + | chr4_1:79885981-79886000 | Msa0575900:intron | 35.0% | |
!! | TGGAAAGTATCACCTATTTG+GGG | - | chr4_1:79885996-79886015 | None:intergenic | 35.0% |
!! | GTTGGAAAGTATCACCTATT+TGG | - | chr4_1:79885998-79886017 | None:intergenic | 35.0% |
CCAAACAAGATGAACATTGT+TGG | - | chr4_1:79886016-79886035 | None:intergenic | 35.0% | |
CCAACAATGTTCATCTTGTT+TGG | + | chr4_1:79886013-79886032 | Msa0575900:intron | 35.0% | |
! | CTTGATAGTTGATACTGCAT+CGG | + | chr4_1:79886058-79886077 | Msa0575900:intron | 35.0% |
ATGAGAAAGTCAAAGTTCCT+TGG | - | chr4_1:79886108-79886127 | None:intergenic | 35.0% | |
!! | CAAGTGAACTGCTTTTGTTT+GGG | - | chr4_1:79886236-79886255 | None:intergenic | 35.0% |
!! | TCAAGTGAACTGCTTTTGTT+TGG | - | chr4_1:79886237-79886256 | None:intergenic | 35.0% |
! | TTAGAGGAAGCACACAAATT+GGG | - | chr4_1:79886354-79886373 | None:intergenic | 35.0% |
! | CATTTTAAATACGCCATCCA+GGG | + | chr4_1:79886546-79886565 | Msa0575900:intron | 35.0% |
! | ATTTTAAATACGCCATCCAG+GGG | + | chr4_1:79886547-79886566 | Msa0575900:intron | 35.0% |
TAGATGCTCAATAAGAAGGT+GGG | + | chr4_1:79886830-79886849 | Msa0575900:intron | 35.0% | |
AAACCCCAGTCTATTATAGA+AGG | - | chr4_1:79887024-79887043 | None:intergenic | 35.0% | |
! | TCTATAATAGACTGGGGTTT+TGG | + | chr4_1:79887024-79887043 | Msa0575900:intron | 35.0% |
TTGTTTGGCAACCAAATATG+CGG | + | chr4_1:79887084-79887103 | Msa0575900:CDS | 35.0% | |
CAGCATATATCAGTATGCAA+TGG | + | chr4_1:79887119-79887138 | Msa0575900:CDS | 35.0% | |
GTACTTGTCTGTTGTAATCA+TGG | + | chr4_1:79887141-79887160 | Msa0575900:CDS | 35.0% | |
TCTGGCATTCTTAATTGTAC+TGG | + | chr4_1:79887443-79887462 | Msa0575900:intron | 35.0% | |
TCTTCTGTAAGTGTAAGACA+AGG | - | chr4_1:79887561-79887580 | None:intergenic | 35.0% | |
AATTGCTGACATTACTGAGA+TGG | + | chr4_1:79887713-79887732 | Msa0575900:CDS | 35.0% | |
! | GTATATGTTTGGTTCAATGG+AGG | + | chr4_1:79887847-79887866 | Msa0575900:intron | 35.0% |
CCTAAATTGTGGAAATTCTG+AGG | - | chr4_1:79887956-79887975 | None:intergenic | 35.0% | |
CCTCAGAATTTCCACAATTT+AGG | + | chr4_1:79887953-79887972 | Msa0575900:intron | 35.0% | |
CAGAATTTCCACAATTTAGG+AGG | + | chr4_1:79887956-79887975 | Msa0575900:intron | 35.0% | |
GAATTTCCACAATTTAGGAG+GGG | + | chr4_1:79887958-79887977 | Msa0575900:intron | 35.0% | |
GTAGTGTCAGTTAGAGAATT+GGG | - | chr4_1:79888172-79888191 | None:intergenic | 35.0% | |
TGTAGTGTCAGTTAGAGAAT+TGG | - | chr4_1:79888173-79888192 | None:intergenic | 35.0% | |
CATTATCAACAAGGAGGAAT+GGG | - | chr4_1:79888253-79888272 | None:intergenic | 35.0% | |
! | TTCTAAAAATCCTACCTCCA+TGG | + | chr4_1:79888347-79888366 | Msa0575900:intron | 35.0% |
TCTAAAAATCCTACCTCCAT+GGG | + | chr4_1:79888348-79888367 | Msa0575900:intron | 35.0% | |
TATTCCATATAATTGGCCCA+TGG | - | chr4_1:79888367-79888386 | None:intergenic | 35.0% | |
TGGGCCAATTATATGGAATA+AGG | + | chr4_1:79888367-79888386 | Msa0575900:intron | 35.0% | |
GGGCCAATTATATGGAATAA+GGG | + | chr4_1:79888368-79888387 | Msa0575900:intron | 35.0% | |
CAGCCCTTATTCCATATAAT+TGG | - | chr4_1:79888374-79888393 | None:intergenic | 35.0% | |
TGTTTGATGTTACTCTTTGC+AGG | + | chr4_1:79888449-79888468 | Msa0575900:intron | 35.0% | |
GACAGTTACAAGGTTCAATT+GGG | - | chr4_1:79888547-79888566 | None:intergenic | 35.0% | |
TGACAGTTACAAGGTTCAAT+TGG | - | chr4_1:79888548-79888567 | None:intergenic | 35.0% | |
GCAAAGACACAAACTTCAAA+AGG | - | chr4_1:79888632-79888651 | None:intergenic | 35.0% | |
GATGAACATCTTACTACCAA+AGG | - | chr4_1:79888687-79888706 | None:intergenic | 35.0% | |
!!! | TTCTTTTCCTTTCTGGTTTC+TGG | + | chr4_1:79888768-79888787 | Msa0575900:three_prime_UTR | 35.0% |
! | TTTGATTTATATCCACGCAG+TGG | + | chr4_1:79888839-79888858 | Msa0575900:three_prime_UTR | 35.0% |
AGGTAACAACAGACTAACTA+TGG | - | chr4_1:79888927-79888946 | None:intergenic | 35.0% | |
GTTGTTACCTAACTAACTGT+TGG | + | chr4_1:79888937-79888956 | Msa0575900:three_prime_UTR | 35.0% | |
! | TACCTAACTAACTGTTGGTT+TGG | + | chr4_1:79888942-79888961 | Msa0575900:three_prime_UTR | 35.0% |
CTGTCACCTACGTCTTTATT+TGG | - | chr4_1:79879436-79879455 | None:intergenic | 40.0% | |
AATTCAATTCAGTCAGAGGG+AGG | - | chr4_1:79879543-79879562 | None:intergenic | 40.0% | |
GATCAATCAGTGCGGAATTA+GGG | - | chr4_1:79879637-79879656 | None:intergenic | 40.0% | |
! | TGGATTTAGCTTCAAGACGA+AGG | - | chr4_1:79879745-79879764 | None:intergenic | 40.0% |
CAAGACAGAAACAACCTTGA+GGG | - | chr4_1:79879925-79879944 | None:intergenic | 40.0% | |
CCAAAAGGCAAGAAAGACAA+AGG | - | chr4_1:79879972-79879991 | None:intergenic | 40.0% | |
! | CCTTTGTCTTTCTTGCCTTT+TGG | + | chr4_1:79879969-79879988 | Msa0575900:CDS | 40.0% |
! | CGAATGATAATCGGTTCCAT+TGG | - | chr4_1:79880238-79880257 | None:intergenic | 40.0% |
TTCGTATCTTGTGCATGCAA+TGG | + | chr4_1:79880254-79880273 | Msa0575900:CDS | 40.0% | |
ATCTTGTGCATGCAATGGTT+TGG | + | chr4_1:79880259-79880278 | Msa0575900:CDS | 40.0% | |
!! | ATGCAATGGTTTGGTTCTCA+TGG | + | chr4_1:79880268-79880287 | Msa0575900:CDS | 40.0% |
CTTGTTCCTGCTAAGATCAA+GGG | - | chr4_1:79880327-79880346 | None:intergenic | 40.0% | |
ACTTGTTCCTGCTAAGATCA+AGG | - | chr4_1:79880328-79880347 | None:intergenic | 40.0% | |
GAGGTCCAAATGCTTCAATT+TGG | - | chr4_1:79880381-79880400 | None:intergenic | 40.0% | |
AGAGAGACATAGACATACCT+GGG | - | chr4_1:79880438-79880457 | None:intergenic | 40.0% | |
AAGAGAGACATAGACATACC+TGG | - | chr4_1:79880439-79880458 | None:intergenic | 40.0% | |
AAATCTAAATCCAGACGGGA+AGG | - | chr4_1:79880554-79880573 | None:intergenic | 40.0% | |
!! | ATATGGTTTTGCAAGGTGTC+AGG | + | chr4_1:79880617-79880636 | Msa0575900:intron | 40.0% |
!! | TATGGTTTTGCAAGGTGTCA+GGG | + | chr4_1:79880618-79880637 | Msa0575900:intron | 40.0% |
AGTAGAAACTGTTACAGCCT+TGG | + | chr4_1:79880853-79880872 | Msa0575900:intron | 40.0% | |
! | TGATTTTTATGGGTCTACCC+AGG | - | chr4_1:79881184-79881203 | None:intergenic | 40.0% |
!! | GGGAGCATGGTGATTTTTAT+GGG | - | chr4_1:79881194-79881213 | None:intergenic | 40.0% |
!! | TGGGAGCATGGTGATTTTTA+TGG | - | chr4_1:79881195-79881214 | None:intergenic | 40.0% |
ATTATGGAAAGTTGGGAGCA+TGG | - | chr4_1:79881207-79881226 | None:intergenic | 40.0% | |
TGCTCCCAACTTTCCATAAT+TGG | + | chr4_1:79881207-79881226 | Msa0575900:intron | 40.0% | |
GACAGCCAATTATGGAAAGT+TGG | - | chr4_1:79881215-79881234 | None:intergenic | 40.0% | |
TATAGCTCGACAGCCAATTA+TGG | - | chr4_1:79881223-79881242 | None:intergenic | 40.0% | |
AAGACCTTGCTGCTCTTTAT+GGG | - | chr4_1:79881280-79881299 | None:intergenic | 40.0% | |
TTCCATGAATCACAGAAGTC+GGG | - | chr4_1:79881325-79881344 | None:intergenic | 40.0% | |
GTTCCATGAATCACAGAAGT+CGG | - | chr4_1:79881326-79881345 | None:intergenic | 40.0% | |
CTTCTGTGATTCATGGAACA+TGG | + | chr4_1:79881327-79881346 | Msa0575900:intron | 40.0% | |
CCTGCATGATCCAACAAAAT+AGG | - | chr4_1:79881571-79881590 | None:intergenic | 40.0% | |
! | CCTATTTTGTTGGATCATGC+AGG | + | chr4_1:79881568-79881587 | Msa0575900:intron | 40.0% |
TTCAGAGCTAGAGTTTCTTG+TGG | + | chr4_1:79881709-79881728 | Msa0575900:CDS | 40.0% | |
TCAGAGCTAGAGTTTCTTGT+GGG | + | chr4_1:79881710-79881729 | Msa0575900:CDS | 40.0% | |
CTAAAAAGCTTGTGGATGGA+AGG | + | chr4_1:79881743-79881762 | Msa0575900:CDS | 40.0% | |
ATACTTGTGCCCTATACCAT+CGG | - | chr4_1:79881787-79881806 | None:intergenic | 40.0% | |
! | GACACACACTGTCTAAAACT+AGG | + | chr4_1:79881868-79881887 | Msa0575900:intron | 40.0% |
AATGCTGTGTATCACTGTGT+TGG | + | chr4_1:79881962-79881981 | Msa0575900:intron | 40.0% | |
! | ATAAGCAACCTGCCAGTTTT+GGG | + | chr4_1:79882192-79882211 | Msa0575900:CDS | 40.0% |
ACATAAATCCCAAAACTGGC+AGG | - | chr4_1:79882203-79882222 | None:intergenic | 40.0% | |
TGGAAGGTGGCAATAATAGA+AGG | + | chr4_1:79882246-79882265 | Msa0575900:CDS | 40.0% | |
GGAAGGTGGCAATAATAGAA+GGG | + | chr4_1:79882247-79882266 | Msa0575900:CDS | 40.0% | |
AGCGTTCTATTCTTTGGTTG+CGG | + | chr4_1:79882648-79882667 | Msa0575900:CDS | 40.0% | |
!! | TCAGATTCTGTTCTAGCTTC+AGG | + | chr4_1:79882815-79882834 | Msa0575900:CDS | 40.0% |
! | CTTTTGCAGATATGTCTGCT+TGG | + | chr4_1:79882876-79882895 | Msa0575900:CDS | 40.0% |
!! | GATCTCTTGGTAATGCTAGT+GGG | + | chr4_1:79882930-79882949 | Msa0575900:CDS | 40.0% |
!! | ATCTCTTGGTAATGCTAGTG+GGG | + | chr4_1:79882931-79882950 | Msa0575900:CDS | 40.0% |
AGTCATTCTATGTGCTCCTT+GGG | - | chr4_1:79883071-79883090 | None:intergenic | 40.0% | |
ATCAATAGTGGTCAATGGTG+AGG | - | chr4_1:79883107-79883126 | None:intergenic | 40.0% | |
!! | GTCTTTTTGAAAGTGAGGAG+GGG | - | chr4_1:79883170-79883189 | None:intergenic | 40.0% |
!! | GGTCTTTTTGAAAGTGAGGA+GGG | - | chr4_1:79883171-79883190 | None:intergenic | 40.0% |
!! | AGGTCTTTTTGAAAGTGAGG+AGG | - | chr4_1:79883172-79883191 | None:intergenic | 40.0% |
TTTCCTCTACCAAGTTATGG+CGG | - | chr4_1:79883204-79883223 | None:intergenic | 40.0% | |
TATGGGTGACAATCGACTAT+GGG | - | chr4_1:79883322-79883341 | None:intergenic | 40.0% | |
ATATGGGTGACAATCGACTA+TGG | - | chr4_1:79883323-79883342 | None:intergenic | 40.0% | |
AATATTTGCAGCCCAAGACA+AGG | + | chr4_1:79883400-79883419 | Msa0575900:CDS | 40.0% | |
GCATGAATACTTCCTTGTCT+TGG | - | chr4_1:79883415-79883434 | None:intergenic | 40.0% | |
!! | AGACAAGGAAGTATTCATGC+AGG | + | chr4_1:79883415-79883434 | Msa0575900:CDS | 40.0% |
TAGTGACCAAACTTCTAAGC+AGG | + | chr4_1:79883468-79883487 | Msa0575900:CDS | 40.0% | |
AGTGACCAAACTTCTAAGCA+GGG | + | chr4_1:79883469-79883488 | Msa0575900:CDS | 40.0% | |
TTGAACCCTGCTTAGAAGTT+TGG | - | chr4_1:79883477-79883496 | None:intergenic | 40.0% | |
!! | GGTTCAATTGATTTTGCTGC+TGG | + | chr4_1:79883490-79883509 | Msa0575900:CDS | 40.0% |
AAGTGAACTGTCATCATCAC+CGG | - | chr4_1:79883518-79883537 | None:intergenic | 40.0% | |
! | TGTAGTTTGTCTCCATCTGA+AGG | - | chr4_1:79883849-79883868 | None:intergenic | 40.0% |
GATATTCACGAGCATTTGAG+TGG | + | chr4_1:79883889-79883908 | Msa0575900:intron | 40.0% | |
GAAGATGAGAAGCTCAACAT+GGG | - | chr4_1:79884160-79884179 | None:intergenic | 40.0% | |
TGAAGATGAGAAGCTCAACA+TGG | - | chr4_1:79884161-79884180 | None:intergenic | 40.0% | |
!! | GTTTCTAGCTGAACAGTTGA+GGG | - | chr4_1:79884410-79884429 | None:intergenic | 40.0% |
!! | AGTTTCTAGCTGAACAGTTG+AGG | - | chr4_1:79884411-79884430 | None:intergenic | 40.0% |
! | AAGATGTTGCGTTGGATTAG+TGG | + | chr4_1:79884516-79884535 | Msa0575900:intron | 40.0% |
! | GGATTAGTGGTAAGACTAGA+AGG | + | chr4_1:79884529-79884548 | Msa0575900:intron | 40.0% |
AGACTAGAAGGGATAGGATT+AGG | + | chr4_1:79884541-79884560 | Msa0575900:intron | 40.0% | |
ACACCATTAGAGAGAGAGTT+GGG | + | chr4_1:79884568-79884587 | Msa0575900:intron | 40.0% | |
TGTAGAGATTAGACCTGTAG+AGG | + | chr4_1:79884644-79884663 | Msa0575900:intron | 40.0% | |
ATGAAGAGTAGATCAGATGG+AGG | + | chr4_1:79884672-79884691 | Msa0575900:intron | 40.0% | |
CAATCCTTCACCCAAAAGTT+TGG | + | chr4_1:79885356-79885375 | Msa0575900:intron | 40.0% | |
! | AATGTTGCTTCTGATGGATC+AGG | + | chr4_1:79885594-79885613 | Msa0575900:CDS | 40.0% |
!! | AACCTACTTTTCTGCATCGA+AGG | + | chr4_1:79885734-79885753 | Msa0575900:intron | 40.0% |
GCATCGAAGGCTACATAATT+CGG | + | chr4_1:79885747-79885766 | Msa0575900:intron | 40.0% | |
AATTTGTGACTCTGACTCCA+AGG | + | chr4_1:79886088-79886107 | Msa0575900:intron | 40.0% | |
!! | GAACTGCTTTTGTTTGGGTA+AGG | - | chr4_1:79886231-79886250 | None:intergenic | 40.0% |
! | GTTAGAGGAAGCACACAAAT+TGG | - | chr4_1:79886355-79886374 | None:intergenic | 40.0% |
GCTTCCTCTAACTTTGAACA+AGG | + | chr4_1:79886363-79886382 | Msa0575900:intron | 40.0% | |
CCTGGATGGCGTATTTAAAA+TGG | - | chr4_1:79886548-79886567 | None:intergenic | 40.0% | |
! | CCATTTTAAATACGCCATCC+AGG | + | chr4_1:79886545-79886564 | Msa0575900:intron | 40.0% |
!! | GAATGGGACTTCAGGTTTTA+AGG | + | chr4_1:79886627-79886646 | Msa0575900:CDS | 40.0% |
CTCATCAGGGTAAATTTCGA+GGG | + | chr4_1:79886714-79886733 | Msa0575900:intron | 40.0% | |
CAAGTGTTTGATTCATGTGG+TGG | + | chr4_1:79886801-79886820 | Msa0575900:CDS | 40.0% | |
CTAGATGCTCAATAAGAAGG+TGG | + | chr4_1:79886829-79886848 | Msa0575900:intron | 40.0% | |
! | TTTAAATGGCAGTTTGGAGC+AGG | + | chr4_1:79887050-79887069 | Msa0575900:intron | 40.0% |
CATTTGAACCACCGCATATT+TGG | - | chr4_1:79887098-79887117 | None:intergenic | 40.0% | |
GTCTGTTGTAATCATGGCAA+TGG | + | chr4_1:79887147-79887166 | Msa0575900:CDS | 40.0% | |
!!! | GGAAGGCTTTTGAAACTATC+TGG | + | chr4_1:79887425-79887444 | Msa0575900:intron | 40.0% |
TCAAGATCGCTGTTTGTGAT+CGG | + | chr4_1:79887591-79887610 | Msa0575900:CDS | 40.0% | |
TCTGTAATATGGAGACACAG+AGG | - | chr4_1:79887676-79887695 | None:intergenic | 40.0% | |
! | TTTGGTTCAATGGAGGAGAA+GGG | + | chr4_1:79887854-79887873 | Msa0575900:intron | 40.0% |
TTCATTCCCCTCCTAAATTG+TGG | - | chr4_1:79887967-79887986 | None:intergenic | 40.0% | |
ATAGAAAGAAAGTGAGGGGA+GGG | - | chr4_1:79888048-79888067 | None:intergenic | 40.0% | |
AATAGAAAGAAAGTGAGGGG+AGG | - | chr4_1:79888049-79888068 | None:intergenic | 40.0% | |
AGTTATGGAATTCCACTGCT+GGG | - | chr4_1:79888107-79888126 | None:intergenic | 40.0% | |
AAGTTATGGAATTCCACTGC+TGG | - | chr4_1:79888108-79888127 | None:intergenic | 40.0% | |
GAGAGTGAGAAAGGAAGTTA+TGG | - | chr4_1:79888122-79888141 | None:intergenic | 40.0% | |
TGTCAGTTAGAGAATTGGGA+GGG | - | chr4_1:79888168-79888187 | None:intergenic | 40.0% | |
TCATGATAAGATGCACGCTT+GGG | - | chr4_1:79888216-79888235 | None:intergenic | 40.0% | |
ACAAGGAGGAATGGGAATTT+GGG | - | chr4_1:79888245-79888264 | None:intergenic | 40.0% | |
AACAAGGAGGAATGGGAATT+TGG | - | chr4_1:79888246-79888265 | None:intergenic | 40.0% | |
GCATTATCAACAAGGAGGAA+TGG | - | chr4_1:79888254-79888273 | None:intergenic | 40.0% | |
TTACTCTTTGCAGGTGATTG+TGG | + | chr4_1:79888458-79888477 | Msa0575900:intron | 40.0% | |
ACAAGGTTCAATTGGGTAGA+AGG | - | chr4_1:79888540-79888559 | None:intergenic | 40.0% | |
!! | GCTCTCTGAAATTGAAGCTT+CGG | + | chr4_1:79888589-79888608 | Msa0575900:CDS | 40.0% |
GAAGTTTGTGTCTTTGCTGA+AGG | + | chr4_1:79888635-79888654 | Msa0575900:CDS | 40.0% | |
CCAAAAACCAGAAACCAGAA+AGG | - | chr4_1:79888778-79888797 | None:intergenic | 40.0% | |
!!! | CCTTTCTGGTTTCTGGTTTT+TGG | + | chr4_1:79888775-79888794 | Msa0575900:three_prime_UTR | 40.0% |
AGCCAAACCAACAGTTAGTT+AGG | - | chr4_1:79888947-79888966 | None:intergenic | 40.0% | |
TCGATACGTGTACGGATGAA+TGG | - | chr4_1:79879567-79879586 | None:intergenic | 45.0% | |
GGATCAATCAGTGCGGAATT+AGG | - | chr4_1:79879638-79879657 | None:intergenic | 45.0% | |
!! | TCCGCACTGATTGATCCATA+TGG | + | chr4_1:79879641-79879660 | Msa0575900:exon | 45.0% |
GCCATATGGATCAATCAGTG+CGG | - | chr4_1:79879645-79879664 | None:intergenic | 45.0% | |
ATCCATATGGCGATTGTGAC+CGG | + | chr4_1:79879654-79879673 | Msa0575900:exon | 45.0% | |
CTTCTCCAGATAACGATCTC+CGG | - | chr4_1:79879676-79879695 | None:intergenic | 45.0% | |
TGTCAAGTTCGTCGAAGATC+AGG | + | chr4_1:79879698-79879717 | Msa0575900:CDS | 45.0% | |
GTCTTGAAGCTAAATCCAGC+CGG | + | chr4_1:79879747-79879766 | Msa0575900:CDS | 45.0% | |
TGAGAAGACGAAGGATCCTA+CGG | - | chr4_1:79879899-79879918 | None:intergenic | 45.0% | |
GCAAGACAGAAACAACCTTG+AGG | - | chr4_1:79879926-79879945 | None:intergenic | 45.0% | |
! | TGTCTTTCTTGCCTTTTGGG+AGG | + | chr4_1:79879973-79879992 | Msa0575900:CDS | 45.0% |
AGAACCTTCAACCTCCCAAA+AGG | - | chr4_1:79879987-79880006 | None:intergenic | 45.0% | |
TTGAAGGTTCTTGAGCTCAG+AGG | + | chr4_1:79879996-79880015 | Msa0575900:CDS | 45.0% | |
GATCAAGGGTTTCGACAGAA+GGG | - | chr4_1:79880313-79880332 | None:intergenic | 45.0% | |
AGATCAAGGGTTTCGACAGA+AGG | - | chr4_1:79880314-79880333 | None:intergenic | 45.0% | |
TCGAAACCCTTGATCTTAGC+AGG | + | chr4_1:79880318-79880337 | Msa0575900:CDS | 45.0% | |
!! | TTCTGAGGTGATTGAAACCG+AGG | - | chr4_1:79880400-79880419 | None:intergenic | 45.0% |
CATAGACATACCTGGGTGAA+GGG | - | chr4_1:79880431-79880450 | None:intergenic | 45.0% | |
ACATAGACATACCTGGGTGA+AGG | - | chr4_1:79880432-79880451 | None:intergenic | 45.0% | |
TACTCAATGAAGGTGGCTAG+AGG | - | chr4_1:79880579-79880598 | None:intergenic | 45.0% | |
AACCAAACCAGCCCTATCAT+GGG | - | chr4_1:79880733-79880752 | None:intergenic | 45.0% | |
TAACCAAACCAGCCCTATCA+TGG | - | chr4_1:79880734-79880753 | None:intergenic | 45.0% | |
GTCACAGCTTAACTGATCCA+AGG | - | chr4_1:79880873-79880892 | None:intergenic | 45.0% | |
AGACCTTGCTGCTCTTTATG+GGG | - | chr4_1:79881279-79881298 | None:intergenic | 45.0% | |
GAAGACCTTGCTGCTCTTTA+TGG | - | chr4_1:79881281-79881300 | None:intergenic | 45.0% | |
! | GGCCCACATACCTATTTTGT+TGG | + | chr4_1:79881558-79881577 | Msa0575900:intron | 45.0% |
AATGCTCTAACTACTCTGCG+AGG | + | chr4_1:79881626-79881645 | Msa0575900:CDS | 45.0% | |
ATGCTCTAACTACTCTGCGA+GGG | + | chr4_1:79881627-79881646 | Msa0575900:CDS | 45.0% | |
ATCCTTTATGTTGTGCCCGA+TGG | + | chr4_1:79881768-79881787 | Msa0575900:CDS | 45.0% | |
TACCATCGGGCACAACATAA+AGG | - | chr4_1:79881773-79881792 | None:intergenic | 45.0% | |
TATGTTGTGCCCGATGGTAT+AGG | + | chr4_1:79881774-79881793 | Msa0575900:CDS | 45.0% | |
ATGTTGTGCCCGATGGTATA+GGG | + | chr4_1:79881775-79881794 | Msa0575900:CDS | 45.0% | |
TACTTGTGCCCTATACCATC+GGG | - | chr4_1:79881786-79881805 | None:intergenic | 45.0% | |
TTTCTTCGCCTACCCAGAAA+AGG | + | chr4_1:79881811-79881830 | Msa0575900:CDS | 45.0% | |
! | TGACAGTTTGCTCTCGTTTG+AGG | + | chr4_1:79881912-79881931 | Msa0575900:intron | 45.0% |
! | GACAGTTTGCTCTCGTTTGA+GGG | + | chr4_1:79881913-79881932 | Msa0575900:intron | 45.0% |
! | CAGTGATACACAGCATTGAG+TGG | - | chr4_1:79881959-79881978 | None:intergenic | 45.0% |
! | CATAAGCAACCTGCCAGTTT+TGG | + | chr4_1:79882191-79882210 | Msa0575900:CDS | 45.0% |
TGGGATTTATGTACCTGCCA+AGG | + | chr4_1:79882211-79882230 | Msa0575900:CDS | 45.0% | |
TTATGTACCTGCCAAGGATG+AGG | + | chr4_1:79882217-79882236 | Msa0575900:CDS | 45.0% | |
TTCCACTATAGCCTCATCCT+TGG | - | chr4_1:79882231-79882250 | None:intergenic | 45.0% | |
! | AAGGATGAGGCTATAGTGGA+AGG | + | chr4_1:79882230-79882249 | Msa0575900:CDS | 45.0% |
GCGTTCTATTCTTTGGTTGC+GGG | + | chr4_1:79882649-79882668 | Msa0575900:CDS | 45.0% | |
!! | GGATCTCTTGGTAATGCTAG+TGG | + | chr4_1:79882929-79882948 | Msa0575900:CDS | 45.0% |
TCATTCTATGTGCTCCTTGG+GGG | - | chr4_1:79883069-79883088 | None:intergenic | 45.0% | |
GTCATTCTATGTGCTCCTTG+GGG | - | chr4_1:79883070-79883089 | None:intergenic | 45.0% | |
CAGTCATTCTATGTGCTCCT+TGG | - | chr4_1:79883072-79883091 | None:intergenic | 45.0% | |
! | CAAGGAGCACATAGAATGAC+TGG | + | chr4_1:79883070-79883089 | Msa0575900:CDS | 45.0% |
!! | GTCAGCTGATTCCTTTTCAG+TGG | + | chr4_1:79883234-79883253 | Msa0575900:CDS | 45.0% |
ATCAGAAGACGCCACTGAAA+AGG | - | chr4_1:79883248-79883267 | None:intergenic | 45.0% | |
CAATCGACTATGGGAACTGA+TGG | - | chr4_1:79883313-79883332 | None:intergenic | 45.0% | |
!! | ATTGATTTTGCTGCTGGTGC+CGG | + | chr4_1:79883496-79883515 | Msa0575900:CDS | 45.0% |
CTGCAATTCCATCCTTCAGA+TGG | + | chr4_1:79883834-79883853 | Msa0575900:CDS | 45.0% | |
GTTTGTCTCCATCTGAAGGA+TGG | - | chr4_1:79883845-79883864 | None:intergenic | 45.0% | |
GAGAAGCTCAACATGGGAAA+AGG | - | chr4_1:79884154-79884173 | None:intergenic | 45.0% | |
TGGAGATGAAGATGTTGCGT+TGG | + | chr4_1:79884508-79884527 | Msa0575900:intron | 45.0% | |
GTGGTAAGACTAGAAGGGAT+AGG | + | chr4_1:79884535-79884554 | Msa0575900:intron | 45.0% | |
GACACCATTAGAGAGAGAGT+TGG | + | chr4_1:79884567-79884586 | Msa0575900:intron | 45.0% | |
CACCATTAGAGAGAGAGTTG+GGG | + | chr4_1:79884569-79884588 | Msa0575900:intron | 45.0% | |
TACCCCAACTCTCTCTCTAA+TGG | - | chr4_1:79884574-79884593 | None:intergenic | 45.0% | |
! | CTCTTCATACTAGCCTCTAC+AGG | - | chr4_1:79884660-79884679 | None:intergenic | 45.0% |
AGTCAGATCTGAAGAGGTAG+AGG | + | chr4_1:79884697-79884716 | Msa0575900:intron | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4_1:79884837-79884856 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4_1:79884838-79884857 | None:intergenic | 45.0% |
GCAGCACATAGAGCTTCTTA+AGG | - | chr4_1:79885569-79885588 | None:intergenic | 45.0% | |
! | TGCTTCTGATGGATCAGGTT+CGG | + | chr4_1:79885599-79885618 | Msa0575900:intron | 45.0% |
AGCCTTCGATGCAGAAAAGT+AGG | - | chr4_1:79885739-79885758 | None:intergenic | 45.0% | |
AATACGCTCAAAAGTTCCCC+TGG | - | chr4_1:79886566-79886585 | None:intergenic | 45.0% | |
! | CGTATTGAGTTGCCACAAGA+TGG | + | chr4_1:79886580-79886599 | Msa0575900:CDS | 45.0% |
!!! | TGTGGTTCTTTTGGCTCATC+AGG | + | chr4_1:79886700-79886719 | Msa0575900:intron | 45.0% |
!!! | GTGGTTCTTTTGGCTCATCA+GGG | + | chr4_1:79886701-79886720 | Msa0575900:intron | 45.0% |
GCTCATCAGGGTAAATTTCG+AGG | + | chr4_1:79886713-79886732 | Msa0575900:intron | 45.0% | |
ATCAGGGTAAATTTCGAGGG+TGG | + | chr4_1:79886717-79886736 | Msa0575900:intron | 45.0% | |
TCAGGGTAAATTTCGAGGGT+GGG | + | chr4_1:79886718-79886737 | Msa0575900:intron | 45.0% | |
TTTGGCAACCAAATATGCGG+TGG | + | chr4_1:79887087-79887106 | Msa0575900:CDS | 45.0% | |
! | GTTTGGTTCAATGGAGGAGA+AGG | + | chr4_1:79887853-79887872 | Msa0575900:intron | 45.0% |
TTCAATGGAGGAGAAGGGAA+GGG | + | chr4_1:79887859-79887878 | Msa0575900:intron | 45.0% | |
GAATACACGTTTACGAGGAC+AGG | - | chr4_1:79888146-79888165 | None:intergenic | 45.0% | |
GTGTCAGTTAGAGAATTGGG+AGG | - | chr4_1:79888169-79888188 | None:intergenic | 45.0% | |
ACGCTTGGGAAGAAGAAAGA+GGG | - | chr4_1:79888202-79888221 | None:intergenic | 45.0% | |
CTCATGATAAGATGCACGCT+TGG | - | chr4_1:79888217-79888236 | None:intergenic | 45.0% | |
CAAGCGTGCATCTTATCATG+AGG | + | chr4_1:79888215-79888234 | Msa0575900:intron | 45.0% | |
TATAATTGGCCCATGGAGGT+AGG | - | chr4_1:79888360-79888379 | None:intergenic | 45.0% | |
ACCTCCATGGGCCAATTATA+TGG | + | chr4_1:79888360-79888379 | Msa0575900:intron | 45.0% | |
TCCATATAATTGGCCCATGG+AGG | - | chr4_1:79888364-79888383 | None:intergenic | 45.0% | |
!! | GACAGCTGCTGTGTTACTTT+AGG | + | chr4_1:79888486-79888505 | Msa0575900:CDS | 45.0% |
AACCTTGTAACTGTCAGCCA+TGG | + | chr4_1:79888552-79888571 | Msa0575900:CDS | 45.0% | |
TTCCATGGCTGACAGTTACA+AGG | - | chr4_1:79888557-79888576 | None:intergenic | 45.0% | |
AACTGTCAGCCATGGAAACA+CGG | + | chr4_1:79888560-79888579 | Msa0575900:CDS | 45.0% | |
CTTCAATTTCAGAGAGCCTG+GGG | - | chr4_1:79888586-79888605 | None:intergenic | 45.0% | |
GCTTCAATTTCAGAGAGCCT+GGG | - | chr4_1:79888587-79888606 | None:intergenic | 45.0% | |
AGCTTCAATTTCAGAGAGCC+TGG | - | chr4_1:79888588-79888607 | None:intergenic | 45.0% | |
!! | CTCTGAAATTGAAGCTTCGG+TGG | + | chr4_1:79888592-79888611 | Msa0575900:CDS | 45.0% |
GGCATTCCATGCAGAAAAAG+TGG | + | chr4_1:79888656-79888675 | Msa0575900:CDS | 45.0% | |
TGAAAAGAACAACCACTGCG+TGG | - | chr4_1:79888854-79888873 | None:intergenic | 45.0% | |
TACCGATGGGCGTTTGTGTT+TGG | + | chr4_1:79879484-79879503 | Msa0575900:five_prime_UTR | 50.0% | |
AGCCAAACACAAACGCCCAT+CGG | - | chr4_1:79879489-79879508 | None:intergenic | 50.0% | |
ATTCAGTCAGAGGGAGGATG+AGG | - | chr4_1:79879537-79879556 | None:intergenic | 50.0% | |
TGTGACCGGAGATCGTTATC+TGG | + | chr4_1:79879668-79879687 | Msa0575900:CDS | 50.0% | |
CAAGTTCGTCGAAGATCAGG+CGG | + | chr4_1:79879701-79879720 | Msa0575900:CDS | 50.0% | |
AAGTTCGTCGAAGATCAGGC+GGG | + | chr4_1:79879702-79879721 | Msa0575900:CDS | 50.0% | |
ACGAAGGATCCTTCGATGAG+AGG | - | chr4_1:79879729-79879748 | None:intergenic | 50.0% | |
TGATTGGACGTAGTGAAGGC+CGG | - | chr4_1:79879769-79879788 | None:intergenic | 50.0% | |
GCCTTCACTACGTCCAATCA+AGG | + | chr4_1:79879769-79879788 | Msa0575900:CDS | 50.0% | |
GCCTTGATTGGACGTAGTGA+AGG | - | chr4_1:79879773-79879792 | None:intergenic | 50.0% | |
GAAGGGATTCGAGCCTTGAT+TGG | - | chr4_1:79879785-79879804 | None:intergenic | 50.0% | |
GAGACTCTCAAGCTCGTGAA+GGG | - | chr4_1:79879802-79879821 | None:intergenic | 50.0% | |
TAGGCACGAAGGTAATCGAC+GGG | - | chr4_1:79879837-79879856 | None:intergenic | 50.0% | |
GTAGGCACGAAGGTAATCGA+CGG | - | chr4_1:79879838-79879857 | None:intergenic | 50.0% | |
TGAGGGAAGTGAGAAGACGA+AGG | - | chr4_1:79879908-79879927 | None:intergenic | 50.0% | |
TCGTCTTCTCACTTCCCTCA+AGG | + | chr4_1:79879908-79879927 | Msa0575900:CDS | 50.0% | |
TGTCTTGCAACCTCCCGTTA+GGG | + | chr4_1:79879938-79879957 | Msa0575900:CDS | 50.0% | |
GGCAAGAAAGACAAAGGGGT+GGG | - | chr4_1:79879966-79879985 | None:intergenic | 50.0% | |
AGGCAAGAAAGACAAAGGGG+TGG | - | chr4_1:79879967-79879986 | None:intergenic | 50.0% | |
!! | CTTGCCTTTTGGGAGGTTGA+AGG | + | chr4_1:79879980-79879999 | Msa0575900:CDS | 50.0% |
! | TCTTCTCGAGAGTATGCCTG+AGG | - | chr4_1:79880061-79880080 | None:intergenic | 50.0% |
TGAAGGGAGCAAGTGTTCTG+AGG | - | chr4_1:79880415-79880434 | None:intergenic | 50.0% | |
! | TGACGGATGGAACCCATGAT+AGG | + | chr4_1:79880718-79880737 | Msa0575900:intron | 50.0% |
GACGGATGGAACCCATGATA+GGG | + | chr4_1:79880719-79880738 | Msa0575900:intron | 50.0% | |
!! | AACCCATGATAGGGCTGGTT+TGG | + | chr4_1:79880728-79880747 | Msa0575900:intron | 50.0% |
! | TTGCCTATGATGGGATCAGC+AGG | - | chr4_1:79880819-79880838 | None:intergenic | 50.0% |
AAACATGCGCACACTCACCT+GGG | + | chr4_1:79881164-79881183 | Msa0575900:intron | 50.0% | |
GTCCCGACTTCTGTGATTCA+TGG | + | chr4_1:79881320-79881339 | Msa0575900:intron | 50.0% | |
GTATGTGGGCCCAAAGCAAA+TGG | - | chr4_1:79881549-79881568 | None:intergenic | 50.0% | |
GACAGTGTGTGTCTGTGTGT+CGG | - | chr4_1:79881861-79881880 | None:intergenic | 50.0% | |
GGCAGGTTGCTTATGCATAC+TGG | - | chr4_1:79882186-79882205 | None:intergenic | 50.0% | |
ACTATAGCCTCATCCTTGGC+AGG | - | chr4_1:79882227-79882246 | None:intergenic | 50.0% | |
TGCCAAGGATGAGGCTATAG+TGG | + | chr4_1:79882226-79882245 | Msa0575900:CDS | 50.0% | |
! | GATGAGGCTATAGTGGAAGG+TGG | + | chr4_1:79882233-79882252 | Msa0575900:CDS | 50.0% |
GGTTGCGGGAATTTAGAGAC+TGG | + | chr4_1:79882663-79882682 | Msa0575900:CDS | 50.0% | |
CATTCTATGTGCTCCTTGGG+GGG | - | chr4_1:79883068-79883087 | None:intergenic | 50.0% | |
TGAAAGTGAGGAGGGGATGT+GGG | - | chr4_1:79883163-79883182 | None:intergenic | 50.0% | |
TTGAAAGTGAGGAGGGGATG+TGG | - | chr4_1:79883164-79883183 | None:intergenic | 50.0% | |
AGTTATGGCGGCGATGAAGA+AGG | - | chr4_1:79883192-79883211 | None:intergenic | 50.0% | |
TCTTCATCGCCGCCATAACT+TGG | + | chr4_1:79883192-79883211 | Msa0575900:CDS | 50.0% | |
!! | GCCTTCATTGGCTTCAGAGT+CGG | - | chr4_1:79883797-79883816 | None:intergenic | 50.0% |
CTGAACAGTTGAGGGAAGCA+AGG | - | chr4_1:79884402-79884421 | None:intergenic | 50.0% | |
GAGGAGAGTCAGATCTGAAG+AGG | + | chr4_1:79884691-79884710 | Msa0575900:intron | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | - | chr4_1:79884833-79884852 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4_1:79884839-79884858 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | + | chr4_1:79884836-79884855 | Msa0575900:intron | 50.0% | |
GAGGGCTTCTTCAAGCAACA+CGG | - | chr4_1:79885869-79885888 | None:intergenic | 50.0% | |
GCCACAAGATGGAAGAAGCT+CGG | + | chr4_1:79886591-79886610 | Msa0575900:CDS | 50.0% | |
CCACAAGATGGAAGAAGCTC+GGG | + | chr4_1:79886592-79886611 | Msa0575900:CDS | 50.0% | |
! | GCTTGTTGGAATGGGACTTC+AGG | + | chr4_1:79886619-79886638 | Msa0575900:CDS | 50.0% |
CAGGGTAAATTTCGAGGGTG+GGG | + | chr4_1:79886719-79886738 | Msa0575900:intron | 50.0% | |
! | CAGGTCCAGGTTGAGTTGTT+TGG | + | chr4_1:79887069-79887088 | Msa0575900:CDS | 50.0% |
GGTTGCCAAACAACTCAACC+TGG | - | chr4_1:79887077-79887096 | None:intergenic | 50.0% | |
AGATCGCTGTTTGTGATCGG+AGG | + | chr4_1:79887594-79887613 | Msa0575900:CDS | 50.0% | |
GTTCAATGGAGGAGAAGGGA+AGG | + | chr4_1:79887858-79887877 | Msa0575900:intron | 50.0% | |
TCAATGGAGGAGAAGGGAAG+GGG | + | chr4_1:79887860-79887879 | Msa0575900:intron | 50.0% | |
AGGACAGGTGAGAGTGAGAA+AGG | - | chr4_1:79888131-79888150 | None:intergenic | 50.0% | |
GGAGGGAATACACGTTTACG+AGG | - | chr4_1:79888151-79888170 | None:intergenic | 50.0% | |
CACGCTTGGGAAGAAGAAAG+AGG | - | chr4_1:79888203-79888222 | None:intergenic | 50.0% | |
TCTTTGCAGGTGATTGTGGC+TGG | + | chr4_1:79888462-79888481 | Msa0575900:intron | 50.0% | |
AGAAAAAGTGGCGTCGCCTT+TGG | + | chr4_1:79888668-79888687 | Msa0575900:CDS | 50.0% | |
CTCCGGTCACAATCGCCATA+TGG | - | chr4_1:79879659-79879678 | None:intergenic | 55.0% | |
GGAGACTCTCAAGCTCGTGA+AGG | - | chr4_1:79879803-79879822 | None:intergenic | 55.0% | |
GAGCTTGAGAGTCTCCTCCT+CGG | + | chr4_1:79879807-79879826 | Msa0575900:CDS | 55.0% | |
AGGCACGAAGGTAATCGACG+GGG | - | chr4_1:79879836-79879855 | None:intergenic | 55.0% | |
CTGTCTTGCAACCTCCCGTT+AGG | + | chr4_1:79879937-79879956 | Msa0575900:CDS | 55.0% | |
AAAGGGGTGGGATCCCTAAC+GGG | - | chr4_1:79879954-79879973 | None:intergenic | 55.0% | |
CAAAGGGGTGGGATCCCTAA+CGG | - | chr4_1:79879955-79879974 | None:intergenic | 55.0% | |
GAGGTCGAGCAATCCTTTGG+CGG | - | chr4_1:79880042-79880061 | None:intergenic | 55.0% | |
CCTGAGGTCGAGCAATCCTT+TGG | - | chr4_1:79880045-79880064 | None:intergenic | 55.0% | |
CCAAAGGATTGCTCGACCTC+AGG | + | chr4_1:79880042-79880061 | Msa0575900:CDS | 55.0% | |
AACACTTGCTCCCTTCACCC+AGG | + | chr4_1:79880418-79880437 | Msa0575900:CDS | 55.0% | |
GATGGAACCCATGATAGGGC+TGG | + | chr4_1:79880723-79880742 | Msa0575900:intron | 55.0% | |
GGTCCTGCTGATCCCATCAT+AGG | + | chr4_1:79880813-79880832 | Msa0575900:intron | 55.0% | |
CAAACATGCGCACACTCACC+TGG | + | chr4_1:79881163-79881182 | Msa0575900:intron | 55.0% | |
CTTGCTGCTCTTTATGGGGC+TGG | - | chr4_1:79881275-79881294 | None:intergenic | 55.0% | |
CAGCCCCATAAAGAGCAGCA+AGG | + | chr4_1:79881273-79881292 | Msa0575900:intron | 55.0% | |
GGGCCTCTCTTTCTGACTCA+GGG | + | chr4_1:79882951-79882970 | Msa0575900:CDS | 55.0% | |
GGCCTCTCTTTCTGACTCAG+GGG | + | chr4_1:79882952-79882971 | Msa0575900:CDS | 55.0% | |
GCCTCTCTTTCTGACTCAGG+GGG | + | chr4_1:79882953-79882972 | Msa0575900:CDS | 55.0% | |
TCCCCCTGAGTCAGAAAGAG+AGG | - | chr4_1:79882957-79882976 | None:intergenic | 55.0% | |
TCTTTCTGACTCAGGGGGAG+TGG | + | chr4_1:79882958-79882977 | Msa0575900:CDS | 55.0% | |
TCGCCGCCATAACTTGGTAG+AGG | + | chr4_1:79883198-79883217 | Msa0575900:CDS | 55.0% | |
!! | CACGTGAATGGGAGTGTCGA+TGG | + | chr4_1:79883349-79883368 | Msa0575900:CDS | 55.0% |
!! | GCCGACTCTGAAGCCAATGA+AGG | + | chr4_1:79883793-79883812 | Msa0575900:CDS | 55.0% |
ACTAAGTGGGGTCGGCTACA+TGG | - | chr4_1:79884825-79884844 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | chr4_1:79884824-79884843 | Msa0575900:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | chr4_1:79884825-79884844 | Msa0575900:intron | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | + | chr4_1:79884831-79884850 | Msa0575900:intron | 55.0% | |
CGCTCAAAAGTTCCCCTGGA+TGG | - | chr4_1:79886562-79886581 | None:intergenic | 55.0% | |
CCCGAGCTTCTTCCATCTTG+TGG | - | chr4_1:79886595-79886614 | None:intergenic | 55.0% | |
CAAGATGGAAGAAGCTCGGG+AGG | + | chr4_1:79886595-79886614 | Msa0575900:CDS | 55.0% | |
!! | TCGGGAGGTGCTTGTTGGAA+TGG | + | chr4_1:79886610-79886629 | Msa0575900:CDS | 55.0% |
!! | CGGGAGGTGCTTGTTGGAAT+GGG | + | chr4_1:79886611-79886630 | Msa0575900:CDS | 55.0% |
AAGCTTCTTCTGCCCAGCAG+TGG | + | chr4_1:79888092-79888111 | Msa0575900:intron | 55.0% | |
!!! | GCGACGCCACTTTTTCTGCA+TGG | - | chr4_1:79888665-79888684 | None:intergenic | 55.0% |
TCAGAGGGAGGATGAGGAGG+AGG | - | chr4_1:79879531-79879550 | None:intergenic | 60.0% | |
CAGTCAGAGGGAGGATGAGG+AGG | - | chr4_1:79879534-79879553 | None:intergenic | 60.0% | |
GGCACGAAGGTAATCGACGG+GGG | - | chr4_1:79879835-79879854 | None:intergenic | 60.0% | |
ATCACCGAGGTCGGAGACGT+AGG | - | chr4_1:79879856-79879875 | None:intergenic | 60.0% | |
TACGGAGTTGCTCGAGTGCG+CGG | - | chr4_1:79879881-79879900 | None:intergenic | 60.0% | |
CTTTGGCGGCGGAAGTAGAG+AGG | - | chr4_1:79880028-79880047 | None:intergenic | 60.0% | |
CTCTCTACTTCCGCCGCCAA+AGG | + | chr4_1:79880026-79880045 | Msa0575900:CDS | 60.0% | |
GTCGAGCAATCCTTTGGCGG+CGG | - | chr4_1:79880039-79880058 | None:intergenic | 60.0% | |
GGGGCCTCTCTTTCTGACTC+AGG | + | chr4_1:79882950-79882969 | Msa0575900:CDS | 60.0% | |
TGACTCAGGGGGAGTGGATG+TGG | + | chr4_1:79882964-79882983 | Msa0575900:CDS | 60.0% | |
ATGTGCTCCTTGGGGGGCAA+CGG | - | chr4_1:79883062-79883081 | None:intergenic | 60.0% | |
!! | GAAGCTCGGGAGGTGCTTGT+TGG | + | chr4_1:79886605-79886624 | Msa0575900:CDS | 60.0% |
! | TGGCAGTTTGGAGCAGGTCC+AGG | + | chr4_1:79887056-79887075 | Msa0575900:intron | 60.0% |
GAGGGAGGATGAGGAGGAGG+AGG | - | chr4_1:79879528-79879547 | None:intergenic | 65.0% | |
CAGGCGGGTCCTCTCATCGA+AGG | + | chr4_1:79879717-79879736 | Msa0575900:CDS | 65.0% | |
TGGACGTAGTGAAGGCCGGC+TGG | - | chr4_1:79879765-79879784 | None:intergenic | 65.0% | |
GGTCGGAGACGTAGGCACGA+AGG | - | chr4_1:79879848-79879867 | None:intergenic | 65.0% | |
CGTGCCTACGTCTCCGACCT+CGG | + | chr4_1:79879849-79879868 | Msa0575900:CDS | 65.0% | |
TGCGCGGTGATCACCGAGGT+CGG | - | chr4_1:79879865-79879884 | None:intergenic | 65.0% | |
GCGCACTCGAGCAACTCCGT+AGG | + | chr4_1:79879880-79879899 | Msa0575900:CDS | 65.0% | |
TCCTTGGGGGGCAACGGTGT+CGG | - | chr4_1:79883056-79883075 | None:intergenic | 65.0% | |
AGCCATGGAAACACGGCCCC+AGG | + | chr4_1:79888567-79888586 | Msa0575900:CDS | 65.0% | |
AGCCTGGGGCCGTGTTTCCA+TGG | - | chr4_1:79888572-79888591 | None:intergenic | 65.0% | |
!! | AATCGACGGGGGCACCGAGG+AGG | - | chr4_1:79879824-79879843 | None:intergenic | 70.0% |
!! | GGTAATCGACGGGGGCACCG+AGG | - | chr4_1:79879827-79879846 | None:intergenic | 70.0% |
CGAGTGCGCGGTGATCACCG+AGG | - | chr4_1:79879869-79879888 | None:intergenic | 70.0% | |
GGGGTGGGATCCCTAACGGG+AGG | - | chr4_1:79879951-79879970 | None:intergenic | 70.0% | |
TCCGACACCGTTGCCCCCCA+AGG | + | chr4_1:79883052-79883071 | Msa0575900:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 79879420 | 79889015 | 79879420 | ID=Msa0575900;Name=Msa0575900 |
chr4_1 | mRNA | 79879420 | 79889015 | 79879420 | ID=Msa0575900-mRNA-1;Parent=Msa0575900;Name=Msa0575900-mRNA-1;_AED=0.09;_eAED=0.09;_QI=218|1|1|1|0.90|0.83|12|305|1092 |
chr4_1 | exon | 79879420 | 79879522 | 79879420 | ID=Msa0575900-mRNA-1:exon:28513;Parent=Msa0575900-mRNA-1 |
chr4_1 | exon | 79879545 | 79880100 | 79879545 | ID=Msa0575900-mRNA-1:exon:28514;Parent=Msa0575900-mRNA-1 |
chr4_1 | exon | 79880182 | 79880439 | 79880182 | ID=Msa0575900-mRNA-1:exon:28515;Parent=Msa0575900-mRNA-1 |
chr4_1 | exon | 79881590 | 79881832 | 79881590 | ID=Msa0575900-mRNA-1:exon:28516;Parent=Msa0575900-mRNA-1 |
chr4_1 | exon | 79882122 | 79882268 | 79882122 | ID=Msa0575900-mRNA-1:exon:28517;Parent=Msa0575900-mRNA-1 |
chr4_1 | exon | 79882473 | 79883875 | 79882473 | ID=Msa0575900-mRNA-1:exon:28518;Parent=Msa0575900-mRNA-1 |
chr4_1 | exon | 79885542 | 79885615 | 79885542 | ID=Msa0575900-mRNA-1:exon:28519;Parent=Msa0575900-mRNA-1 |
chr4_1 | exon | 79886567 | 79886648 | 79886567 | ID=Msa0575900-mRNA-1:exon:28520;Parent=Msa0575900-mRNA-1 |
chr4_1 | exon | 79886722 | 79886847 | 79886722 | ID=Msa0575900-mRNA-1:exon:28521;Parent=Msa0575900-mRNA-1 |
chr4_1 | exon | 79887062 | 79887168 | 79887062 | ID=Msa0575900-mRNA-1:exon:28522;Parent=Msa0575900-mRNA-1 |
chr4_1 | exon | 79887577 | 79887734 | 79887577 | ID=Msa0575900-mRNA-1:exon:28523;Parent=Msa0575900-mRNA-1 |
chr4_1 | exon | 79888471 | 79889015 | 79888471 | ID=Msa0575900-mRNA-1:exon:28524;Parent=Msa0575900-mRNA-1 |
chr4_1 | five_prime_UTR | 79879420 | 79879522 | 79879420 | ID=Msa0575900-mRNA-1:five_prime_utr;Parent=Msa0575900-mRNA-1 |
chr4_1 | five_prime_UTR | 79879545 | 79879659 | 79879545 | ID=Msa0575900-mRNA-1:five_prime_utr;Parent=Msa0575900-mRNA-1 |
chr4_1 | CDS | 79879660 | 79880100 | 79879660 | ID=Msa0575900-mRNA-1:cds;Parent=Msa0575900-mRNA-1 |
chr4_1 | CDS | 79880182 | 79880439 | 79880182 | ID=Msa0575900-mRNA-1:cds;Parent=Msa0575900-mRNA-1 |
chr4_1 | CDS | 79881590 | 79881832 | 79881590 | ID=Msa0575900-mRNA-1:cds;Parent=Msa0575900-mRNA-1 |
chr4_1 | CDS | 79882122 | 79882268 | 79882122 | ID=Msa0575900-mRNA-1:cds;Parent=Msa0575900-mRNA-1 |
chr4_1 | CDS | 79882473 | 79883875 | 79882473 | ID=Msa0575900-mRNA-1:cds;Parent=Msa0575900-mRNA-1 |
chr4_1 | CDS | 79885542 | 79885615 | 79885542 | ID=Msa0575900-mRNA-1:cds;Parent=Msa0575900-mRNA-1 |
chr4_1 | CDS | 79886567 | 79886648 | 79886567 | ID=Msa0575900-mRNA-1:cds;Parent=Msa0575900-mRNA-1 |
chr4_1 | CDS | 79886722 | 79886847 | 79886722 | ID=Msa0575900-mRNA-1:cds;Parent=Msa0575900-mRNA-1 |
chr4_1 | CDS | 79887062 | 79887168 | 79887062 | ID=Msa0575900-mRNA-1:cds;Parent=Msa0575900-mRNA-1 |
chr4_1 | CDS | 79887577 | 79887734 | 79887577 | ID=Msa0575900-mRNA-1:cds;Parent=Msa0575900-mRNA-1 |
chr4_1 | CDS | 79888471 | 79888710 | 79888471 | ID=Msa0575900-mRNA-1:cds;Parent=Msa0575900-mRNA-1 |
chr4_1 | three_prime_UTR | 79888711 | 79889015 | 79888711 | ID=Msa0575900-mRNA-1:three_prime_utr;Parent=Msa0575900-mRNA-1 |
Gene Sequence |
Protein sequence |