AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0082290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0082290 MtrunA17_Chr1g0195521 94.900 451 2 1 1 430 1 451 0.0 877
Msa0082290 MtrunA17_Chr4g0067461 70.938 437 106 6 1 430 1 423 0.0 615
Msa0082290 MtrunA17_Chr4g0031131 70.978 317 86 2 115 425 29 345 1.72e-164 466
Msa0082290 MtrunA17_Chr2g0327981 71.704 311 82 2 115 419 35 345 7.19e-162 459
Msa0082290 MtrunA17_Chr1g0182091 84.956 226 34 0 202 427 5 230 2.71e-142 405
Msa0082290 MtrunA17_Chr1g0182071 55.051 198 77 3 8 205 14 199 6.56e-63 202
Msa0082290 MtrunA17_Chr7g0274131 27.711 332 209 10 118 429 29 349 2.43e-26 109
Msa0082290 MtrunA17_Chr1g0190771 26.852 324 218 8 118 426 28 347 3.42e-26 108
Msa0082290 MtrunA17_Chr4g0027491 28.177 362 193 14 105 404 5 361 2.49e-25 106
Msa0082290 MtrunA17_Chr1g0208111 27.714 350 195 12 116 408 17 365 8.72e-25 105
Msa0082290 MtrunA17_Chr8g0359401 27.796 313 193 12 120 408 9 312 6.21e-24 104
Msa0082290 MtrunA17_Chr2g0314601 27.476 313 194 12 120 408 9 312 1.01e-22 100
Msa0082290 MtrunA17_Chr1g0208571 28.060 335 195 13 116 408 17 347 2.19e-22 98.2
Msa0082290 MtrunA17_Chr1g0147841 25.625 320 209 12 120 417 7 319 7.56e-22 98.2
Msa0082290 MtrunA17_Chr7g0230291 26.794 418 224 17 42 412 24 406 1.12e-21 96.7
Msa0082290 MtrunA17_Chr4g0073351 27.479 353 201 15 98 412 84 419 1.91e-20 93.2
Msa0082290 MtrunA17_Chr4g0011281 25.816 337 202 12 115 412 98 425 6.50e-19 88.6
Msa0082290 MtrunA17_Chr3g0121661 26.727 333 192 15 117 408 98 419 1.50e-18 87.4
Msa0082290 MtrunA17_Chr5g0398811 26.946 334 196 12 118 412 90 414 5.21e-17 82.8
Msa0082290 MtrunA17_Chr4g0056941 26.018 442 252 19 12 408 2 413 9.19e-17 82.0
Msa0082290 MtrunA17_Chr8g0388261 27.077 325 185 15 120 401 6 321 5.35e-15 75.9
Msa0082290 MtrunA17_Chr5g0396571 26.462 325 187 15 120 401 6 321 7.16e-15 75.5
Msa0082290 MtrunA17_Chr4g0076751 26.970 330 191 13 120 406 27 349 2.03e-14 74.3
Msa0082290 MtrunA17_Chr5g0396581 25.231 325 191 15 120 401 49 364 2.43e-13 71.2
Msa0082290 MtrunA17_Chr8g0386331 24.620 329 192 15 119 401 7 325 2.48e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0082290 AT3G62830.2 78.330 443 68 5 1 426 1 432 0.0 702
Msa0082290 AT3G62830.1 78.330 443 68 5 1 426 1 432 0.0 702
Msa0082290 AT2G47650.1 78.767 438 75 5 1 425 1 433 0.0 695
Msa0082290 AT2G47650.2 77.703 444 75 6 1 425 1 439 0.0 688
Msa0082290 AT3G53520.1 71.942 417 102 4 19 427 25 434 0.0 607
Msa0082290 AT3G53520.2 71.463 417 102 5 19 427 25 432 0.0 598
Msa0082290 AT3G53520.4 68.182 440 102 5 19 427 25 457 0.0 593
Msa0082290 AT2G28760.4 72.669 311 79 2 115 419 59 369 7.59e-167 473
Msa0082290 AT2G28760.1 72.669 311 79 2 115 419 28 338 9.99e-167 472
Msa0082290 AT2G28760.2 72.669 311 79 2 115 419 28 338 9.99e-167 472
Msa0082290 AT2G28760.3 72.669 311 79 2 115 419 28 338 9.99e-167 472
Msa0082290 AT3G46440.2 71.203 316 84 3 115 424 26 340 5.66e-165 468
Msa0082290 AT3G46440.1 71.203 316 84 3 115 424 26 340 5.66e-165 468
Msa0082290 AT5G59290.1 71.753 308 81 2 118 419 30 337 1.03e-163 464
Msa0082290 AT5G59290.2 71.753 308 81 2 118 419 45 352 1.08e-163 465
Msa0082290 AT5G59290.4 71.753 308 81 2 118 419 1 308 1.76e-163 462
Msa0082290 AT5G59290.3 71.753 308 81 2 118 419 23 330 6.18e-163 462
Msa0082290 AT3G53520.3 72.500 320 73 4 19 330 25 337 1.30e-162 462
Msa0082290 AT1G08200.1 28.286 350 185 15 116 404 16 360 8.99e-26 108
Msa0082290 AT2G27860.1 28.161 348 184 14 118 404 18 360 1.71e-25 107
Msa0082290 AT5G28840.2 27.964 329 217 9 116 429 26 349 3.31e-25 106
Msa0082290 AT5G28840.1 27.964 329 217 9 116 429 26 349 3.31e-25 106
Msa0082290 AT3G14790.2 27.796 313 193 11 120 408 12 315 9.64e-25 107
Msa0082290 AT3G14790.1 27.796 313 193 11 120 408 9 312 9.68e-25 107
Msa0082290 AT1G53500.1 27.187 320 204 12 120 417 11 323 8.10e-24 104
Msa0082290 AT1G78570.1 27.329 322 201 11 120 417 9 321 8.43e-24 104
Msa0082290 AT2G45310.1 25.770 357 203 13 117 427 96 436 1.96e-20 93.6
Msa0082290 AT1G02000.1 25.714 350 212 13 115 427 89 427 6.28e-19 89.0
Msa0082290 AT4G00110.1 24.709 429 253 17 20 408 13 411 7.94e-19 88.6
Msa0082290 AT4G30440.1 26.243 362 194 15 98 412 77 412 9.07e-19 88.6
Msa0082290 AT3G23820.1 25.740 338 189 13 117 408 111 432 5.82e-17 83.2
Msa0082290 AT4G12250.1 25.210 357 201 13 117 425 95 433 2.04e-15 78.2
Msa0082290 AT4G10960.1 27.052 329 190 15 120 406 6 326 1.10e-13 72.4
Msa0082290 AT2G28755.1 49.123 57 29 0 328 384 4 60 2.34e-13 65.1
Msa0082290 AT4G23920.1 25.816 337 198 15 120 415 5 330 5.49e-13 70.5

Find 163 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGAGCCTTTGACAGTTTA+TGG 0.132583 1_2:+61124547 Msa0082290:CDS
CATCTGGGTCGATTGTTTCT+TGG 0.195325 1_2:-61126274 None:intergenic
GAGAACGTTATGCATCATTT+TGG 0.259027 1_2:+61122749 Msa0082290:CDS
CCTGTTTGCCATATTATATC+TGG 0.276091 1_2:+61126831 Msa0082290:three_prime_UTR
TCCATCATCTAAGCACATTC+TGG 0.277067 1_2:-61124375 None:intergenic
CTGTACACTATCTTTGCATC+TGG 0.284479 1_2:-61126290 None:intergenic
AGCCATGGTTTGTTTGGTTT+TGG 0.308012 1_2:-61122344 None:intergenic
TTTCCCTTTCTCACTCTCTA+AGG 0.308944 1_2:-61126514 None:intergenic
CTACAAAACCAGATATAATA+TGG 0.320793 1_2:-61126839 None:intergenic
GCTAGGATCTTTAATACATA+TGG 0.330642 1_2:+61124350 Msa0082290:CDS
ACATACCACCATCAAGAATT+AGG 0.334411 1_2:-61126477 None:intergenic
ATCCTCAGAAGGAGACTTAC+TGG 0.338208 1_2:+61123120 Msa0082290:CDS
ATTCAACTTATTTGTGAAGT+TGG 0.354971 1_2:-61126800 None:intergenic
GGAGGGTCTAATGCGCCTTA+TGG 0.364799 1_2:+61125796 Msa0082290:CDS
GCCGCGGTGGTTCATTCGTC+CGG 0.369904 1_2:+61122581 Msa0082290:CDS
ACAGAGAGCCATGGTTTGTT+TGG 0.370816 1_2:-61122350 None:intergenic
TCCTTAGCATTACTAATATC+AGG 0.371147 1_2:-61126347 None:intergenic
CCATCAACCGATCCACTAGA+TGG 0.373651 1_2:-61122676 None:intergenic
CCCTTGCGCAGGTCCACCTT+GGG 0.374902 1_2:-61126386 None:intergenic
GTATGCTACCTCTACCTTCC+TGG 0.376519 1_2:+61126863 Msa0082290:three_prime_UTR
ACTGGTGGAGCGGGGTTCGT+TGG 0.383783 1_2:+61122650 Msa0082290:CDS
TATCCCTAACGGAATCTTCC+CGG 0.388157 1_2:-61122600 None:intergenic
GCGCAAGGGCCTCCCACTAA+TGG 0.391517 1_2:+61126400 Msa0082290:CDS
AGGAGCCTTTGACAGTTTAT+GGG 0.392286 1_2:+61124548 Msa0082290:CDS
CTGGTGGAGCGGGGTTCGTT+GGG 0.393802 1_2:+61122651 Msa0082290:CDS
TCAAATTATTTACCTAGATT+AGG 0.396832 1_2:+61126897 Msa0082290:three_prime_UTR
ATCGTGGTGACTGGTGGAGC+GGG 0.397599 1_2:+61122641 Msa0082290:CDS
GGGCTGCGGATCGTGGTGAC+TGG 0.410525 1_2:+61122632 Msa0082290:CDS
TTCCCTCATCGTAGCAGCTT+CGG 0.415039 1_2:-61124128 None:intergenic
CCTCTACCTTCCTGGACACT+CGG 0.426101 1_2:+61126871 Msa0082290:three_prime_UTR
ATCTGATGCCTAATTCTTGA+TGG 0.429722 1_2:+61126469 Msa0082290:exon
AGTTGGAGCAAAATAGAATA+AGG 0.433617 1_2:-61126783 None:intergenic
TATAGATAGAATTATATAGA+TGG 0.433980 1_2:-61126697 None:intergenic
CATAAATGAAAGCCTAATCT+AGG 0.435969 1_2:-61126909 None:intergenic
GCCCTTGCGCAGGTCCACCT+TGG 0.438364 1_2:-61126387 None:intergenic
CCATCTAGTGGATCGGTTGA+TGG 0.441443 1_2:+61122676 Msa0082290:CDS
ATGCTAAGGAGCACCTTGGC+TGG 0.442296 1_2:+61126360 Msa0082290:CDS
TGGGGAAACGTTAATCCAAT+TGG 0.447650 1_2:+61123140 Msa0082290:CDS
CCAGATATAATATGGCAAAC+AGG 0.449264 1_2:-61126831 None:intergenic
GTTGTTGATAATTTCTTCAC+TGG 0.449487 1_2:+61122719 Msa0082290:CDS
CGGAAGTCGGAAACCATTAG+TGG 0.450288 1_2:-61126413 None:intergenic
CCATCATCTAAGCACATTCT+GGG 0.451125 1_2:-61124374 None:intergenic
TACGGCTGAGACATTGACTA+TGG 0.452590 1_2:+61124155 Msa0082290:CDS
CAACAAAAGTAACATTTAAG+AGG 0.457596 1_2:-61126602 None:intergenic
CAATCAATCTTCAAAGATTG+AGG 0.457660 1_2:-61126634 None:intergenic
TAATTTCTTCACTGGTAGAA+AGG 0.458747 1_2:+61122727 Msa0082290:CDS
CTGCGGATCGTGGTGACTGG+TGG 0.460556 1_2:+61122635 Msa0082290:CDS
CCGTTCAACCTTGGAAATCC+TGG 0.460579 1_2:+61125836 Msa0082290:CDS
CTCTACCTTCCTGGACACTC+GGG 0.462862 1_2:+61126872 Msa0082290:three_prime_UTR
GATGAAGAAGTTGAAGATGA+AGG 0.465158 1_2:-61122464 None:intergenic
TCGTCCGGGAAGATTCCGTT+AGG 0.467216 1_2:+61122596 Msa0082290:CDS
GGGTTGAACTTGTAATGAAC+AGG 0.472521 1_2:-61122863 None:intergenic
ACAAGTACAAGTGAGGTCTA+TGG 0.474387 1_2:+61123083 Msa0082290:CDS
CCTTTGACAGTTTATGGGGA+TGG 0.479069 1_2:+61124553 Msa0082290:CDS
CTTGGATTGGCGAAAAGAGT+TGG 0.481126 1_2:+61123044 Msa0082290:CDS
TGTACCTTAGAGAGTGAGAA+AGG 0.484526 1_2:+61126510 Msa0082290:three_prime_UTR
GAAATTGATAAATGAAATCA+TGG 0.484544 1_2:-61126671 None:intergenic
CGTTAGTAACTTCGTTGCTC+AGG 0.484924 1_2:+61124403 Msa0082290:CDS
CCACCTTGGGTTCCCAGCCA+AGG 0.489999 1_2:-61126373 None:intergenic
CTTTGACAGTTTATGGGGAT+GGG 0.494567 1_2:+61124554 Msa0082290:CDS
CCCTTCCTCTTTATCCCTAA+CGG 0.497420 1_2:-61122611 None:intergenic
GGATAAAGAGGAAGGGGCTG+CGG 0.500833 1_2:+61122618 Msa0082290:CDS
CATGTGGGGCCGTTCAACCT+TGG 0.503780 1_2:+61125827 Msa0082290:CDS
AATGAAATCATGGCTGGCTA+TGG 0.506217 1_2:-61126661 None:intergenic
TACCATGCTTGAACTTGCCA+AGG 0.506479 1_2:+61125865 Msa0082290:CDS
TTGATAAATGAAATCATGGC+TGG 0.507655 1_2:-61126667 None:intergenic
CCACATGTTCCCCTTCCATA+AGG 0.508074 1_2:-61125811 None:intergenic
GTGGGAACATTGAACATGCT+TGG 0.509297 1_2:+61123026 Msa0082290:CDS
TGCTAAGGAGCACCTTGGCT+GGG 0.512225 1_2:+61126361 Msa0082290:CDS
GGTCTAATGCGCCTTATGGA+AGG 0.512523 1_2:+61125800 Msa0082290:CDS
CCGCGGTGGTTCATTCGTCC+GGG 0.513229 1_2:+61122582 Msa0082290:CDS
TCCTCAGAAGGAGACTTACT+GGG 0.519434 1_2:+61123121 Msa0082290:CDS
CCAGGATTTCCAAGGTTGAA+CGG 0.522672 1_2:-61125836 None:intergenic
CCCCAGTAAGTCTCCTTCTG+AGG 0.524128 1_2:-61123122 None:intergenic
AACATTGAACATGCTTGGAT+TGG 0.524725 1_2:+61123031 Msa0082290:CDS
TTGGGTCCCATCTAGTGGAT+CGG 0.526167 1_2:+61122669 Msa0082290:CDS
AGTTCAGAATTGACTTTCAG+AGG 0.526556 1_2:+61122287 Msa0082290:CDS
TAAGCAACGCGCTGCCGCGG+TGG 0.526605 1_2:+61122568 Msa0082290:CDS
CCGAGTGTCCAGGAAGGTAG+AGG 0.526772 1_2:-61126871 None:intergenic
TGATCAACTTCAAGAAGAAG+AGG 0.527982 1_2:-61122812 None:intergenic
GTTCGTTGGGTCCCATCTAG+TGG 0.529461 1_2:+61122664 Msa0082290:CDS
TCCTTCTGAGGATGCTGCAG+AGG 0.534418 1_2:-61123110 None:intergenic
TTTCCAATACGTCTCTGACT+TGG 0.538596 1_2:+61124591 Msa0082290:CDS
TTGTAATGAACAGGAGAAGC+AGG 0.538705 1_2:-61122854 None:intergenic
GATAGAATTATATAGATGGC+AGG 0.541480 1_2:-61126693 None:intergenic
AATCAATCTTCAAAGATTGA+GGG 0.543476 1_2:-61126633 None:intergenic
GCCTGATATTAGTAATGCTA+AGG 0.543495 1_2:+61126346 Msa0082290:CDS
ACCCAAGGTGGACCTGCGCA+AGG 0.544301 1_2:+61126385 Msa0082290:CDS
CCATCCCCATAAACTGTCAA+AGG 0.544642 1_2:-61124553 None:intergenic
TTACCAAGTCAGAGACGTAT+TGG 0.546881 1_2:-61124594 None:intergenic
GTCTAATGCGCCTTATGGAA+GGG 0.547257 1_2:+61125801 Msa0082290:CDS
CGAGTCTGATTCGTATGGAC+GGG 0.548354 1_2:-61122501 None:intergenic
TACCTTGGCAAGTTCAAGCA+TGG 0.549103 1_2:-61125867 None:intergenic
TGTACACTATCTTTGCATCT+GGG 0.549639 1_2:-61126289 None:intergenic
GCACCTTGGCTGGGAACCCA+AGG 0.550808 1_2:+61126370 Msa0082290:CDS
TCACAGAGGGGCCGGTGTAG+AGG 0.552066 1_2:+61124182 Msa0082290:CDS
TTTATGTTGGCACAGGTGGA+GGG 0.552335 1_2:+61125779 Msa0082290:intron
CCTTATGGAAGGGGAACATG+TGG 0.552410 1_2:+61125811 Msa0082290:CDS
ATGGATTATCACAGAGGGGC+CGG 0.554708 1_2:+61124174 Msa0082290:CDS
CCCAGAATGTGCTTAGATGA+TGG 0.557030 1_2:+61124374 Msa0082290:CDS
TCTAATGCGCCTTATGGAAG+GGG 0.557519 1_2:+61125802 Msa0082290:CDS
CTACATGCAGGCGCTGAGGA+AGG 0.558115 1_2:+61124528 Msa0082290:intron
TCCGTTAGGGATAAAGAGGA+AGG 0.560397 1_2:+61122610 Msa0082290:CDS
TCACGAAGCATGTAACGAAT+CGG 0.561879 1_2:-61122380 None:intergenic
TCCTCTGCAGCATCCTCAGA+AGG 0.565302 1_2:+61123109 Msa0082290:CDS
AGATTCCGTTAGGGATAAAG+AGG 0.565904 1_2:+61122606 Msa0082290:CDS
GATCGTGGTGACTGGTGGAG+CGG 0.568659 1_2:+61122640 Msa0082290:CDS
TTTGGTGACCACAAGGAAGG+TGG 0.568962 1_2:+61126446 Msa0082290:CDS
CGTTAGGGATAAAGAGGAAG+GGG 0.570309 1_2:+61122612 Msa0082290:CDS
AATTTGAACCCCGAGTGTCC+AGG 0.571273 1_2:-61126881 None:intergenic
TCTTCAAAGATTGAGGGAGA+AGG 0.575434 1_2:-61126627 None:intergenic
TCAAGCATGGTAAATTCACC+AGG 0.575463 1_2:-61125854 None:intergenic
TTAGTGGGAGGCCCTTGCGC+AGG 0.576261 1_2:-61126397 None:intergenic
GCGCGTTGCTTATACACTGC+CGG 0.578384 1_2:-61122557 None:intergenic
TAAATTCACCAGGATTTCCA+AGG 0.581095 1_2:-61125844 None:intergenic
GAGATCGAGTCTGATTCGTA+TGG 0.586595 1_2:-61122506 None:intergenic
GTATAAGCAACGCGCTGCCG+CGG 0.587453 1_2:+61122565 Msa0082290:CDS
TCTGAGGATAACAAACACTT+AGG 0.587516 1_2:+61126545 Msa0082290:three_prime_UTR
AGGTATGATTGTGAAGAATA+CGG 0.588806 1_2:-61122444 None:intergenic
GGAGCCTTTGACAGTTTATG+GGG 0.589496 1_2:+61124549 Msa0082290:CDS
CGTCCGGGAAGATTCCGTTA+GGG 0.590511 1_2:+61122597 Msa0082290:CDS
GTCCGAAGCTGCTACGATGA+GGG 0.595012 1_2:+61124126 Msa0082290:CDS
CCCAAGGTGGACCTGCGCAA+GGG 0.598380 1_2:+61126386 Msa0082290:CDS
GAGGAAGGGGCTGCGGATCG+TGG 0.599017 1_2:+61122625 Msa0082290:CDS
TTATGGAAGGGGAACATGTG+GGG 0.599343 1_2:+61125813 Msa0082290:CDS
TGGATCGGTTGATGGCGAGA+GGG 0.602798 1_2:+61122684 Msa0082290:CDS
CTTATGGAAGGGGAACATGT+GGG 0.604163 1_2:+61125812 Msa0082290:CDS
TGACTATGGATTATCACAGA+GGG 0.606976 1_2:+61124169 Msa0082290:CDS
GGACGAATTACAGAGAGCCA+TGG 0.607729 1_2:-61122359 None:intergenic
GTACCTTAGAGAGTGAGAAA+GGG 0.610517 1_2:+61126511 Msa0082290:three_prime_UTR
TCGTGGTGACTGGTGGAGCG+GGG 0.612656 1_2:+61122642 Msa0082290:CDS
CCTTGGCTGGGAACCCAAGG+TGG 0.613832 1_2:+61126373 Msa0082290:CDS
CATCAACCGATCCACTAGAT+GGG 0.613973 1_2:-61122675 None:intergenic
TCGAGTCTGATTCGTATGGA+CGG 0.616312 1_2:-61122502 None:intergenic
GTGGATCGGTTGATGGCGAG+AGG 0.617231 1_2:+61122683 Msa0082290:CDS
CCGTTAGGGATAAAGAGGAA+GGG 0.621408 1_2:+61122611 Msa0082290:CDS
GGATCGGTTGATGGCGAGAG+GGG 0.622105 1_2:+61122685 Msa0082290:CDS
CACCAAAACCAAACAAACCA+TGG 0.623979 1_2:+61122342 Msa0082290:CDS
TGTCCGAAGCTGCTACGATG+AGG 0.627996 1_2:+61124125 Msa0082290:CDS
TACCCTACATGCAGGCGCTG+AGG 0.629312 1_2:+61124524 Msa0082290:intron
AGTAATGCTAAGGAGCACCT+TGG 0.629892 1_2:+61126356 Msa0082290:CDS
TGTCGAATAAGCTCAAATCT+CGG 0.633642 1_2:-61122776 None:intergenic
CGTTTACAAGACGAATGTGG+TGG 0.636722 1_2:+61123007 Msa0082290:intron
CTACGATGAGGGAAAGCGTA+CGG 0.639259 1_2:+61124137 Msa0082290:CDS
TGATGCCTAATTCTTGATGG+TGG 0.639475 1_2:+61126472 Msa0082290:exon
CATCAGATCCACCTTCCTTG+TGG 0.652215 1_2:-61126454 None:intergenic
GGAAGTCGGAAACCATTAGT+GGG 0.652640 1_2:-61126412 None:intergenic
TTGCTTATACACTGCCGGTG+TGG 0.653879 1_2:-61122552 None:intergenic
GTTTACAAGACGAATGTGGT+GGG 0.657175 1_2:+61123008 Msa0082290:intron
CCGGTGTGGTCTTTGACTCG+CGG 0.658452 1_2:-61122538 None:intergenic
GAACGTTTACAAGACGAATG+TGG 0.658652 1_2:+61123004 Msa0082290:intron
CTTGCTAACAAGTACAAGTG+AGG 0.669816 1_2:+61123076 Msa0082290:CDS
TCTACCTTCCTGGACACTCG+GGG 0.670383 1_2:+61126873 Msa0082290:three_prime_UTR
GTTGAAAATGACCTCTACAC+CGG 0.674888 1_2:-61124193 None:intergenic
TGAACCCCGAGTGTCCAGGA+AGG 0.680945 1_2:-61126877 None:intergenic
GATATAATATGGCAAACAGG+AGG 0.688147 1_2:-61126828 None:intergenic
AGTCGGAAACCATTAGTGGG+AGG 0.693475 1_2:-61126409 None:intergenic
GACTATGGATTATCACAGAG+GGG 0.723185 1_2:+61124170 Msa0082290:CDS
TTGACTATGGATTATCACAG+AGG 0.727119 1_2:+61124168 Msa0082290:CDS
AGTGTACAGAGATAATACAG+AGG 0.727131 1_2:+61126304 Msa0082290:CDS
CCTCAGAAGGAGACTTACTG+GGG 0.731723 1_2:+61123122 Msa0082290:CDS
CCGCGAGTCAAAGACCACAC+CGG 0.734448 1_2:+61122538 Msa0082290:CDS
CCCGGACGAATGAACCACCG+CGG 0.764877 1_2:-61122582 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGTTTTGTTATTTTAATTT+CGG + chr1_2:61123331-61123350 Msa0082290:intron 10.0%
!! AAAAAAAAAAAACTACTAAT+TGG + chr1_2:61124259-61124278 Msa0082290:intron 10.0%
!!! ATTTAATATTTGTTTCTAAT+CGG + chr1_2:61124501-61124520 Msa0082290:intron 10.0%
!!! ATTCTATCTATATATTTTTT+TGG + chr1_2:61126708-61126727 Msa0082290:three_prime_UTR 10.0%
!! AGATAAAGAAATAATGAAAA+AGG - chr1_2:61122906-61122925 None:intergenic 15.0%
!! TAATTTAATTGAATTGAAGT+AGG + chr1_2:61123194-61123213 Msa0082290:intron 15.0%
!!! TTAATTTGAATTCTATTTCT+AGG + chr1_2:61123252-61123271 Msa0082290:intron 15.0%
!!! AATTGATTTTGCTAAAAAAT+TGG - chr1_2:61125103-61125122 None:intergenic 15.0%
!!! AATTTTTTCAATTAAATGTG+CGG - chr1_2:61125386-61125405 None:intergenic 15.0%
!! CATTTAATTGAAAAAATTTC+TGG + chr1_2:61125388-61125407 Msa0082290:intron 15.0%
!! TATAGATAGAATTATATAGA+TGG - chr1_2:61126700-61126719 None:intergenic 15.0%
!!! TATATTTTTTTGGATGTAAT+TGG + chr1_2:61126718-61126737 Msa0082290:three_prime_UTR 15.0%
!!! ATATTTTTTTGGATGTAATT+GGG + chr1_2:61126719-61126738 Msa0082290:three_prime_UTR 15.0%
!!! ATTATTTCTTTATCTATGAC+TGG + chr1_2:61122911-61122930 Msa0082290:intron 20.0%
!!! ATTTTAATTTCGGACTTTTT+TGG + chr1_2:61123341-61123360 Msa0082290:intron 20.0%
!! TCTAAATATCAACTACTAAT+TGG + chr1_2:61124221-61124240 Msa0082290:intron 20.0%
!!! AATGTTATGTATGTGTTTTT+AGG + chr1_2:61124319-61124338 Msa0082290:intron 20.0%
!! AGAATTAATTTAGAGATGTT+TGG + chr1_2:61124954-61124973 Msa0082290:intron 20.0%
!! GGATAAATTCATATAAGAAT+GGG - chr1_2:61125056-61125075 None:intergenic 20.0%
!! TGGATAAATTCATATAAGAA+TGG - chr1_2:61125057-61125076 None:intergenic 20.0%
!! AATGAAAAATGATTCATGTT+TGG - chr1_2:61125077-61125096 None:intergenic 20.0%
!! ATTGAAATCGCAATAAATTA+AGG - chr1_2:61125213-61125232 None:intergenic 20.0%
!!! TTTTTTCCATGTTTGAATTT+TGG + chr1_2:61125302-61125321 Msa0082290:intron 20.0%
!! CGATGATATTTAATTATTCA+CGG - chr1_2:61125666-61125685 None:intergenic 20.0%
!! AACTATTCATTCATAATACT+TGG + chr1_2:61125984-61126003 Msa0082290:intron 20.0%
!!! GAATGAAGAATATTAGTTTT+TGG + chr1_2:61126146-61126165 Msa0082290:intron 20.0%
!!! ACTAATTGTTTATTTTCTGT+CGG + chr1_2:61126169-61126188 Msa0082290:intron 20.0%
!! TTATGATGCATTCAATAATA+GGG - chr1_2:61126229-61126248 None:intergenic 20.0%
!! ATTATGATGCATTCAATAAT+AGG - chr1_2:61126230-61126249 None:intergenic 20.0%
!! GAAATTGATAAATGAAATCA+TGG - chr1_2:61126674-61126693 None:intergenic 20.0%
!! TCAAATTATTTACCTAGATT+AGG + chr1_2:61126897-61126916 Msa0082290:three_prime_UTR 20.0%
!!! AAAGGATATGATAGTTTTGA+CGG - chr1_2:61122888-61122907 None:intergenic 25.0%
! GGTATAAACAGTGTTTAATT+TGG + chr1_2:61123273-61123292 Msa0082290:intron 25.0%
!!! ATGTTTTTTATAGGAAGTGT+TGG - chr1_2:61123607-61123626 None:intergenic 25.0%
! AACACTTCCTATAAAAAACA+TGG + chr1_2:61123606-61123625 Msa0082290:intron 25.0%
!!! ACATCAACCATGTTTTTTAT+AGG - chr1_2:61123616-61123635 None:intergenic 25.0%
!! ATAAAAAACATGGTTGATGT+TGG + chr1_2:61123616-61123635 Msa0082290:intron 25.0%
!! AGTAGTTGATATTTAGAAAG+AGG - chr1_2:61124218-61124237 None:intergenic 25.0%
!! TGGAAGTACAATAAAAGAAA+GGG - chr1_2:61124433-61124452 None:intergenic 25.0%
!! ATGGAAGTACAATAAAAGAA+AGG - chr1_2:61124434-61124453 None:intergenic 25.0%
!!! TTTGTTGTTTGAAATTGGAA+TGG - chr1_2:61124453-61124472 None:intergenic 25.0%
!!! TTGTTTTAGTCTCAAATTCA+TGG + chr1_2:61125025-61125044 Msa0082290:intron 25.0%
!!! TAATTGTGAGTTTGGTTTTA+TGG - chr1_2:61125147-61125166 None:intergenic 25.0%
! ACATATACTAATTGTGAGTT+TGG - chr1_2:61125155-61125174 None:intergenic 25.0%
! ACTCACAATTAGTATATGTT+AGG + chr1_2:61125156-61125175 Msa0082290:intron 25.0%
! TATTTAATTATTCACGGTCA+CGG - chr1_2:61125660-61125679 None:intergenic 25.0%
! CGTGAATAATTATTTGACTA+TGG + chr1_2:61125684-61125703 Msa0082290:intron 25.0%
!! CATCAATGTGATTTTTATGT+TGG + chr1_2:61125766-61125785 Msa0082290:intron 25.0%
! TTAACTTAGTTGGATTATCA+TGG - chr1_2:61125958-61125977 None:intergenic 25.0%
! AGTTCTTCAATTAACTTAGT+TGG - chr1_2:61125968-61125987 None:intergenic 25.0%
! TAATAAACAATAATGACAGG+AGG - chr1_2:61126099-61126118 None:intergenic 25.0%
! CAGTAATAAACAATAATGAC+AGG - chr1_2:61126102-61126121 None:intergenic 25.0%
! TGTTCATATTCTAATGATGT+GGG + chr1_2:61126120-61126139 Msa0082290:intron 25.0%
! CAACAAAAGTAACATTTAAG+AGG - chr1_2:61126605-61126624 None:intergenic 25.0%
! AATCAATCTTCAAAGATTGA+GGG - chr1_2:61126636-61126655 None:intergenic 25.0%
! ATTCAACTTATTTGTGAAGT+TGG - chr1_2:61126803-61126822 None:intergenic 25.0%
! CTACAAAACCAGATATAATA+TGG - chr1_2:61126842-61126861 None:intergenic 25.0%
AGGTATGATTGTGAAGAATA+CGG - chr1_2:61122447-61122466 None:intergenic 30.0%
!! GTTGTTGATAATTTCTTCAC+TGG + chr1_2:61122719-61122738 Msa0082290:CDS 30.0%
TAATTTCTTCACTGGTAGAA+AGG + chr1_2:61122727-61122746 Msa0082290:CDS 30.0%
!!! AAGGATATGATAGTTTTGAC+GGG - chr1_2:61122887-61122906 None:intergenic 30.0%
GTCTTGTAAACGTTCAATTA+AGG - chr1_2:61122999-61123018 None:intergenic 30.0%
TTAAGATGTTACTCACCAAT+TGG - chr1_2:61123158-61123177 None:intergenic 30.0%
GAATTGAAGTAGGAGTTAAT+AGG + chr1_2:61123204-61123223 Msa0082290:intron 30.0%
! AGTTAATAGGTGGATTTGTT+TGG + chr1_2:61123217-61123236 Msa0082290:intron 30.0%
CTGAAATTCATACGAAAACA+CGG - chr1_2:61123402-61123421 None:intergenic 30.0%
! GTGTTTTCGTATGAATTTCA+GGG + chr1_2:61123401-61123420 Msa0082290:intron 30.0%
AAATTACCATCTATGATGCA+CGG - chr1_2:61123774-61123793 None:intergenic 30.0%
! TGCATCATAGATGGTAATTT+TGG + chr1_2:61123774-61123793 Msa0082290:intron 30.0%
! GCATCATAGATGGTAATTTT+GGG + chr1_2:61123775-61123794 Msa0082290:intron 30.0%
! CATCATAGATGGTAATTTTG+GGG + chr1_2:61123776-61123795 Msa0082290:intron 30.0%
GATAGACACAAAGTTATCTA+TGG - chr1_2:61123843-61123862 None:intergenic 30.0%
AATAAATTGTTGTGTGAGAC+AGG + chr1_2:61124102-61124121 Msa0082290:intron 30.0%
!!! GTTTTTAGGTTAGAATTGCT+AGG + chr1_2:61124333-61124352 Msa0082290:intron 30.0%
GCTAGGATCTTTAATACATA+TGG + chr1_2:61124350-61124369 Msa0082290:CDS 30.0%
AATTTCAAACAACAAAGCCA+CGG + chr1_2:61124457-61124476 Msa0082290:intron 30.0%
!!! CCAGAATAGAGTTTTGTTAA+TGG - chr1_2:61124650-61124669 None:intergenic 30.0%
CCATTAACAAAACTCTATTC+TGG + chr1_2:61124647-61124666 Msa0082290:intron 30.0%
ACTCTATTCTGGACTATATT+TGG + chr1_2:61124658-61124677 Msa0082290:intron 30.0%
TGTTCTAATTCTAACTTAGC+TGG + chr1_2:61124978-61124997 Msa0082290:intron 30.0%
GAAATCGCAATAAATTAAGG+TGG - chr1_2:61125210-61125229 None:intergenic 30.0%
AGTACTCCAAAATTCAAACA+TGG - chr1_2:61125311-61125330 None:intergenic 30.0%
TCTTAATAACTAATGAGCGA+AGG + chr1_2:61125430-61125449 Msa0082290:intron 30.0%
GTAGCAAGAATAAATCAAAG+TGG + chr1_2:61125583-61125602 Msa0082290:intron 30.0%
ATTTAATTATTCACGGTCAC+GGG - chr1_2:61125659-61125678 None:intergenic 30.0%
TTGCCAAGGTAAAGATTATT+AGG + chr1_2:61125879-61125898 Msa0082290:intron 30.0%
CTTCCTAATAATCTTTACCT+TGG - chr1_2:61125885-61125904 None:intergenic 30.0%
CAAGGTAAAGATTATTAGGA+AGG + chr1_2:61125883-61125902 Msa0082290:intron 30.0%
CAAATGATTATGAGCTATTC+TGG - chr1_2:61125912-61125931 None:intergenic 30.0%
TTCATTCATAATACTTGGCA+TGG + chr1_2:61125989-61126008 Msa0082290:intron 30.0%
CTGTTCATATTCTAATGATG+TGG + chr1_2:61126119-61126138 Msa0082290:intron 30.0%
!! AATTGTTTATTTTCTGTCGG+TGG + chr1_2:61126172-61126191 Msa0082290:intron 30.0%
CATCATAATGTATGTACGTT+TGG + chr1_2:61126241-61126260 Msa0082290:intron 30.0%
TCCTTAGCATTACTAATATC+AGG - chr1_2:61126350-61126369 None:intergenic 30.0%
AAGGGAAAAAATATAGTCTG+AGG + chr1_2:61126529-61126548 Msa0082290:three_prime_UTR 30.0%
CAATCAATCTTCAAAGATTG+AGG - chr1_2:61126637-61126656 None:intergenic 30.0%
TTGATAAATGAAATCATGGC+TGG - chr1_2:61126670-61126689 None:intergenic 30.0%
GATAGAATTATATAGATGGC+AGG - chr1_2:61126696-61126715 None:intergenic 30.0%
AGTTGGAGCAAAATAGAATA+AGG - chr1_2:61126786-61126805 None:intergenic 30.0%
! AGTTCAGAATTGACTTTCAG+AGG + chr1_2:61122287-61122306 Msa0082290:CDS 35.0%
GATGAAGAAGTTGAAGATGA+AGG - chr1_2:61122467-61122486 None:intergenic 35.0%
! GAGAACGTTATGCATCATTT+TGG + chr1_2:61122749-61122768 Msa0082290:CDS 35.0%
TGTCGAATAAGCTCAAATCT+CGG - chr1_2:61122779-61122798 None:intergenic 35.0%
TGATCAACTTCAAGAAGAAG+AGG - chr1_2:61122815-61122834 None:intergenic 35.0%
!!! AGGATATGATAGTTTTGACG+GGG - chr1_2:61122886-61122905 None:intergenic 35.0%
AACATTGAACATGCTTGGAT+TGG + chr1_2:61123031-61123050 Msa0082290:CDS 35.0%
TTGAAGTAGGAGTTAATAGG+TGG + chr1_2:61123207-61123226 Msa0082290:intron 35.0%
TGGTTAACCAATAAGACAAG+TGG + chr1_2:61123361-61123380 Msa0082290:intron 35.0%
! CGTGTTTTCGTATGAATTTC+AGG + chr1_2:61123400-61123419 Msa0082290:intron 35.0%
!! TTTTAGGTATCCGTGATTTG+CGG + chr1_2:61123429-61123448 Msa0082290:intron 35.0%
! ATTTTCACGTTTATGCAACG+TGG - chr1_2:61123493-61123512 None:intergenic 35.0%
! CTTTTTACTACAGCACACAA+GGG - chr1_2:61123518-61123537 None:intergenic 35.0%
! ACTTTTTACTACAGCACACA+AGG - chr1_2:61123519-61123538 None:intergenic 35.0%
TAAAAAGTGAACGTGAACGT+AGG + chr1_2:61123531-61123550 Msa0082290:intron 35.0%
GCTACACATTATAGAACACA+TGG - chr1_2:61123583-61123602 None:intergenic 35.0%
TCTATGATTACACTGCGTTA+TGG + chr1_2:61123677-61123696 Msa0082290:intron 35.0%
!!! TAATTTTGGGGTTTGTGGTT+GGG + chr1_2:61123788-61123807 Msa0082290:intron 35.0%
TCTATGGCACCAAAAAACTA+TGG - chr1_2:61123827-61123846 None:intergenic 35.0%
!!! CCATAGTTTTTTGGTGACAT+TGG - chr1_2:61123936-61123955 None:intergenic 35.0%
CCAATGTCACCAAAAAACTA+TGG + chr1_2:61123933-61123952 Msa0082290:intron 35.0%
ACCACAAACGGAAAATACTT+GGG - chr1_2:61123961-61123980 None:intergenic 35.0%
AACCACAAACGGAAAATACT+TGG - chr1_2:61123962-61123981 None:intergenic 35.0%
! TCCTATTGAGGTGTTCAAAT+TGG + chr1_2:61124015-61124034 Msa0082290:intron 35.0%
! CCTATTGAGGTGTTCAAATT+GGG + chr1_2:61124016-61124035 Msa0082290:intron 35.0%
ATTGGGAAAGTGAAGAAAAG+TGG + chr1_2:61124033-61124052 Msa0082290:intron 35.0%
! TTTTGTCCTTGTCTCTATGT+AGG + chr1_2:61124060-61124079 Msa0082290:intron 35.0%
TAACAACCTACATAGAGACA+AGG - chr1_2:61124069-61124088 None:intergenic 35.0%
TTGTCTCTATGTAGGTTGTT+AGG + chr1_2:61124068-61124087 Msa0082290:intron 35.0%
GTAGGTTGTTAGGTACAATT+TGG + chr1_2:61124078-61124097 Msa0082290:intron 35.0%
! TTGACTATGGATTATCACAG+AGG + chr1_2:61124168-61124187 Msa0082290:CDS 35.0%
! TGACTATGGATTATCACAGA+GGG + chr1_2:61124169-61124188 Msa0082290:CDS 35.0%
!! GTGGCTTTGTTGTTTGAAAT+TGG - chr1_2:61124458-61124477 None:intergenic 35.0%
ATTTCAAACAACAAAGCCAC+GGG + chr1_2:61124458-61124477 Msa0082290:intron 35.0%
ACACCATAGATATTGCAAAG+CGG + chr1_2:61124873-61124892 Msa0082290:intron 35.0%
TTGCTATCACAATTCACAGT+AGG - chr1_2:61124918-61124937 None:intergenic 35.0%
! AATTTCTGGACTTCTGTTGA+TGG + chr1_2:61125402-61125421 Msa0082290:intron 35.0%
CAAACTGCAATTATATGAGC+TGG - chr1_2:61125551-61125570 None:intergenic 35.0%
GAGAAAGATTCCAAATCCAA+AGG - chr1_2:61125738-61125757 None:intergenic 35.0%
! TGTGATTTTTATGTTGGCAC+AGG + chr1_2:61125772-61125791 Msa0082290:intron 35.0%
TAAATTCACCAGGATTTCCA+AGG - chr1_2:61125847-61125866 None:intergenic 35.0%
!!! AGTTAGCTGGACCAATTTTT+TGG + chr1_2:61126059-61126078 Msa0082290:intron 35.0%
CAGTGAAGCAACCAAAAAAT+TGG - chr1_2:61126073-61126092 None:intergenic 35.0%
!! AATGTATGTACGTTTGGTGT+AGG + chr1_2:61126247-61126266 Msa0082290:intron 35.0%
TGTACACTATCTTTGCATCT+GGG - chr1_2:61126292-61126311 None:intergenic 35.0%
AGTGTACAGAGATAATACAG+AGG + chr1_2:61126304-61126323 Msa0082290:CDS 35.0%
! TATCAGGCTTTCTTTTGTGT+GGG - chr1_2:61126334-61126353 None:intergenic 35.0%
! ATATCAGGCTTTCTTTTGTG+TGG - chr1_2:61126335-61126354 None:intergenic 35.0%
GCCTGATATTAGTAATGCTA+AGG + chr1_2:61126346-61126365 Msa0082290:CDS 35.0%
ATCTGATGCCTAATTCTTGA+TGG + chr1_2:61126469-61126488 Msa0082290:exon 35.0%
ACATACCACCATCAAGAATT+AGG - chr1_2:61126480-61126499 None:intergenic 35.0%
TCTGAGGATAACAAACACTT+AGG + chr1_2:61126545-61126564 Msa0082290:three_prime_UTR 35.0%
GATATAATATGGCAAACAGG+AGG - chr1_2:61126831-61126850 None:intergenic 35.0%
CCAGATATAATATGGCAAAC+AGG - chr1_2:61126834-61126853 None:intergenic 35.0%
CCTGTTTGCCATATTATATC+TGG + chr1_2:61126831-61126850 Msa0082290:three_prime_UTR 35.0%
CACCAAAACCAAACAAACCA+TGG + chr1_2:61122342-61122361 Msa0082290:CDS 40.0%
!!! AGCCATGGTTTGTTTGGTTT+TGG - chr1_2:61122347-61122366 None:intergenic 40.0%
TCACGAAGCATGTAACGAAT+CGG - chr1_2:61122383-61122402 None:intergenic 40.0%
AGATTCCGTTAGGGATAAAG+AGG + chr1_2:61122606-61122625 Msa0082290:CDS 40.0%
TTGTAATGAACAGGAGAAGC+AGG - chr1_2:61122857-61122876 None:intergenic 40.0%
GGGTTGAACTTGTAATGAAC+AGG - chr1_2:61122866-61122885 None:intergenic 40.0%
GAACGTTTACAAGACGAATG+TGG + chr1_2:61123004-61123023 Msa0082290:intron 40.0%
GTTTACAAGACGAATGTGGT+GGG + chr1_2:61123008-61123027 Msa0082290:intron 40.0%
CTTGCTAACAAGTACAAGTG+AGG + chr1_2:61123076-61123095 Msa0082290:CDS 40.0%
ACAAGTACAAGTGAGGTCTA+TGG + chr1_2:61123083-61123102 Msa0082290:CDS 40.0%
TGGGGAAACGTTAATCCAAT+TGG + chr1_2:61123140-61123159 Msa0082290:CDS 40.0%
AGAAATCACACAGAACATGC+AGG - chr1_2:61123302-61123321 None:intergenic 40.0%
!!! GAATTTCAGGGTGTCGTTTT+AGG + chr1_2:61123413-61123432 Msa0082290:intron 40.0%
! TTTAGGTATCCGTGATTTGC+GGG + chr1_2:61123430-61123449 Msa0082290:intron 40.0%
! TATCTGAGCCGTTGATTAAG+TGG - chr1_2:61123457-61123476 None:intergenic 40.0%
TAGATCATATGTCGTGTCGA+CGG - chr1_2:61123661-61123680 None:intergenic 40.0%
CTATATCCGTGCATCATAGA+TGG + chr1_2:61123765-61123784 Msa0082290:intron 40.0%
!!! GATGGTAATTTTGGGGTTTG+TGG + chr1_2:61123783-61123802 Msa0082290:intron 40.0%
!!! GTAATTTTGGGGTTTGTGGT+TGG + chr1_2:61123787-61123806 Msa0082290:intron 40.0%
!!! ACTTGGGTGCCATAGTTTTT+TGG + chr1_2:61123815-61123834 Msa0082290:intron 40.0%
!!! ACTTGGGTGCCATAGTTTTT+TGG - chr1_2:61123815-61123834 None:intergenic 40.0%
! ACCCAAGTATTTTCCGTTTG+TGG + chr1_2:61123957-61123976 Msa0082290:intron 40.0%
TTTCCGTTTGTGGTTACAGA+AGG + chr1_2:61123967-61123986 Msa0082290:intron 40.0%
CAACCTTCTGTAACCACAAA+CGG - chr1_2:61123973-61123992 None:intergenic 40.0%
TTGTGGTTACAGAAGGTTGA+AGG + chr1_2:61123974-61123993 Msa0082290:intron 40.0%
TTACAGAAGGTTGAAGGAGA+GGG + chr1_2:61123980-61123999 Msa0082290:intron 40.0%
CCCAATTTGAACACCTCAAT+AGG - chr1_2:61124019-61124038 None:intergenic 40.0%
! GACTATGGATTATCACAGAG+GGG + chr1_2:61124170-61124189 Msa0082290:CDS 40.0%
GTTGAAAATGACCTCTACAC+CGG - chr1_2:61124196-61124215 None:intergenic 40.0%
CCATCATCTAAGCACATTCT+GGG - chr1_2:61124377-61124396 None:intergenic 40.0%
TCCATCATCTAAGCACATTC+TGG - chr1_2:61124378-61124397 None:intergenic 40.0%
AAGGAGCCTTTGACAGTTTA+TGG + chr1_2:61124547-61124566 Msa0082290:CDS 40.0%
AGGAGCCTTTGACAGTTTAT+GGG + chr1_2:61124548-61124567 Msa0082290:CDS 40.0%
CTTTGACAGTTTATGGGGAT+GGG + chr1_2:61124554-61124573 Msa0082290:CDS 40.0%
TTTCCAATACGTCTCTGACT+TGG + chr1_2:61124591-61124610 Msa0082290:CDS 40.0%
TTACCAAGTCAGAGACGTAT+TGG - chr1_2:61124597-61124616 None:intergenic 40.0%
CGCGTATTTGATATCATGAG+AGG + chr1_2:61124713-61124732 Msa0082290:intron 40.0%
!! GTACGATGCTTTTTACGTTG+AGG + chr1_2:61125332-61125351 Msa0082290:intron 40.0%
TGAAATGTACCAATGCGCAA+TGG - chr1_2:61125481-61125500 None:intergenic 40.0%
AGATTCCAAATCCAAAGGCA+TGG - chr1_2:61125733-61125752 None:intergenic 40.0%
! GATTTTTATGTTGGCACAGG+TGG + chr1_2:61125775-61125794 Msa0082290:intron 40.0%
TCAAGCATGGTAAATTCACC+AGG - chr1_2:61125857-61125876 None:intergenic 40.0%
TCCTTAAAACCAGAGTTAGC+TGG + chr1_2:61126046-61126065 Msa0082290:intron 40.0%
!!! TCCAGCTAACTCTGGTTTTA+AGG - chr1_2:61126050-61126069 None:intergenic 40.0%
AAAATTGGTCCAGCTAACTC+TGG - chr1_2:61126058-61126077 None:intergenic 40.0%
CTGTACACTATCTTTGCATC+TGG - chr1_2:61126293-61126312 None:intergenic 40.0%
AAAAATGCGTTGTCGGAAGT+CGG - chr1_2:61126429-61126448 None:intergenic 40.0%
!!! ATTTTTGGTGACCACAAGGA+AGG + chr1_2:61126443-61126462 Msa0082290:CDS 40.0%
TGATGCCTAATTCTTGATGG+TGG + chr1_2:61126472-61126491 Msa0082290:exon 40.0%
TGTACCTTAGAGAGTGAGAA+AGG + chr1_2:61126510-61126529 Msa0082290:three_prime_UTR 40.0%
GTACCTTAGAGAGTGAGAAA+GGG + chr1_2:61126511-61126530 Msa0082290:three_prime_UTR 40.0%
TTTCCCTTTCTCACTCTCTA+AGG - chr1_2:61126517-61126536 None:intergenic 40.0%
TCTTCAAAGATTGAGGGAGA+AGG - chr1_2:61126630-61126649 None:intergenic 40.0%
! AATGAAATCATGGCTGGCTA+TGG - chr1_2:61126664-61126683 None:intergenic 40.0%
!! ACAGAGAGCCATGGTTTGTT+TGG - chr1_2:61122353-61122372 None:intergenic 45.0%
! CGACTCGTTTTCGTCTTGAT+CGG + chr1_2:61122407-61122426 Msa0082290:CDS 45.0%
! TCGAGTCTGATTCGTATGGA+CGG - chr1_2:61122505-61122524 None:intergenic 45.0%
! GAGATCGAGTCTGATTCGTA+TGG - chr1_2:61122509-61122528 None:intergenic 45.0%
TATCCCTAACGGAATCTTCC+CGG - chr1_2:61122603-61122622 None:intergenic 45.0%
TCCGTTAGGGATAAAGAGGA+AGG + chr1_2:61122610-61122629 Msa0082290:CDS 45.0%
CCCTTCCTCTTTATCCCTAA+CGG - chr1_2:61122614-61122633 None:intergenic 45.0%
CCGTTAGGGATAAAGAGGAA+GGG + chr1_2:61122611-61122630 Msa0082290:CDS 45.0%
CGTTAGGGATAAAGAGGAAG+GGG + chr1_2:61122612-61122631 Msa0082290:CDS 45.0%
CATCAACCGATCCACTAGAT+GGG - chr1_2:61122678-61122697 None:intergenic 45.0%
CGTTTACAAGACGAATGTGG+TGG + chr1_2:61123007-61123026 Msa0082290:intron 45.0%
GTGGGAACATTGAACATGCT+TGG + chr1_2:61123026-61123045 Msa0082290:CDS 45.0%
!! CTTGGATTGGCGAAAAGAGT+TGG + chr1_2:61123044-61123063 Msa0082290:CDS 45.0%
ATCCTCAGAAGGAGACTTAC+TGG + chr1_2:61123120-61123139 Msa0082290:CDS 45.0%
TCCTCAGAAGGAGACTTACT+GGG + chr1_2:61123121-61123140 Msa0082290:CDS 45.0%
CCACGTTCCACTTGTCTTAT+TGG - chr1_2:61123371-61123390 None:intergenic 45.0%
CCAATAAGACAAGTGGAACG+TGG + chr1_2:61123368-61123387 Msa0082290:intron 45.0%
TTAAGTGGACCCGCAAATCA+CGG - chr1_2:61123442-61123461 None:intergenic 45.0%
TTGCGGGTCCACTTAATCAA+CGG + chr1_2:61123446-61123465 Msa0082290:intron 45.0%
!! TGTTGGCTTGTGTCAGTGTA+TGG + chr1_2:61123633-61123652 Msa0082290:intron 45.0%
GTTACAGAAGGTTGAAGGAG+AGG + chr1_2:61123979-61123998 Msa0082290:intron 45.0%
AGGGCAATTTGGTCCTATTG+AGG + chr1_2:61124003-61124022 Msa0082290:intron 45.0%
! TACGGCTGAGACATTGACTA+TGG + chr1_2:61124155-61124174 Msa0082290:CDS 45.0%
CCCAGAATGTGCTTAGATGA+TGG + chr1_2:61124374-61124393 Msa0082290:CDS 45.0%
CGTTAGTAACTTCGTTGCTC+AGG + chr1_2:61124403-61124422 Msa0082290:CDS 45.0%
GGAGCCTTTGACAGTTTATG+GGG + chr1_2:61124549-61124568 Msa0082290:CDS 45.0%
CCATCCCCATAAACTGTCAA+AGG - chr1_2:61124556-61124575 None:intergenic 45.0%
CCTTTGACAGTTTATGGGGA+TGG + chr1_2:61124553-61124572 Msa0082290:CDS 45.0%
! GAGCCGCTTTGCAATATCTA+TGG - chr1_2:61124879-61124898 None:intergenic 45.0%
CTAATGAGCGAAGGTTGTGT+TGG + chr1_2:61125439-61125458 Msa0082290:intron 45.0%
ATGATGTGTCCATTGCGCAT+TGG + chr1_2:61125469-61125488 Msa0082290:intron 45.0%
AAGAACCATTTGCACGTGAC+TGG + chr1_2:61125504-61125523 Msa0082290:intron 45.0%
ATTATATGAGCTGGTCCACC+CGG - chr1_2:61125542-61125561 None:intergenic 45.0%
GTATCCCCATCTTATACACG+AGG - chr1_2:61125612-61125631 None:intergenic 45.0%
TTTGATTGCTGCCATGCCTT+TGG + chr1_2:61125719-61125738 Msa0082290:intron 45.0%
! TTTTATGTTGGCACAGGTGG+AGG + chr1_2:61125778-61125797 Msa0082290:intron 45.0%
TTTATGTTGGCACAGGTGGA+GGG + chr1_2:61125779-61125798 Msa0082290:intron 45.0%
GTCTAATGCGCCTTATGGAA+GGG + chr1_2:61125801-61125820 Msa0082290:CDS 45.0%
TCTAATGCGCCTTATGGAAG+GGG + chr1_2:61125802-61125821 Msa0082290:CDS 45.0%
CTTATGGAAGGGGAACATGT+GGG + chr1_2:61125812-61125831 Msa0082290:CDS 45.0%
TTATGGAAGGGGAACATGTG+GGG + chr1_2:61125813-61125832 Msa0082290:CDS 45.0%
CCAGGATTTCCAAGGTTGAA+CGG - chr1_2:61125839-61125858 None:intergenic 45.0%
TACCATGCTTGAACTTGCCA+AGG + chr1_2:61125865-61125884 Msa0082290:CDS 45.0%
TACCTTGGCAAGTTCAAGCA+TGG - chr1_2:61125870-61125889 None:intergenic 45.0%
!! GTATGTACGTTTGGTGTAGG+TGG + chr1_2:61126250-61126269 Msa0082290:intron 45.0%
! CATCTGGGTCGATTGTTTCT+TGG - chr1_2:61126277-61126296 None:intergenic 45.0%
!! AGTAATGCTAAGGAGCACCT+TGG + chr1_2:61126356-61126375 Msa0082290:CDS 45.0%
GGAAGTCGGAAACCATTAGT+GGG - chr1_2:61126415-61126434 None:intergenic 45.0%
! GACTTCCGACAACGCATTTT+TGG + chr1_2:61126428-61126447 Msa0082290:CDS 45.0%
GGTCACCAAAAATGCGTTGT+CGG - chr1_2:61126436-61126455 None:intergenic 45.0%
!!! ACGCATTTTTGGTGACCACA+AGG + chr1_2:61126439-61126458 Msa0082290:CDS 45.0%
GGACGAATTACAGAGAGCCA+TGG - chr1_2:61122362-61122381 None:intergenic 50.0%
! CGAGTCTGATTCGTATGGAC+GGG - chr1_2:61122504-61122523 None:intergenic 50.0%
TTGCTTATACACTGCCGGTG+TGG - chr1_2:61122555-61122574 None:intergenic 50.0%
! TTGGGTCCCATCTAGTGGAT+CGG + chr1_2:61122669-61122688 Msa0082290:CDS 50.0%
CCATCAACCGATCCACTAGA+TGG - chr1_2:61122679-61122698 None:intergenic 50.0%
! CCATCTAGTGGATCGGTTGA+TGG + chr1_2:61122676-61122695 Msa0082290:CDS 50.0%
CCTCAGAAGGAGACTTACTG+GGG + chr1_2:61123122-61123141 Msa0082290:CDS 50.0%
ACGGCTCAGATAGTTGCTGT+TGG + chr1_2:61123465-61123484 Msa0082290:intron 50.0%
! CGGCTCAGATAGTTGCTGTT+GGG + chr1_2:61123466-61123485 Msa0082290:intron 50.0%
GTGAACGTGAACGTAGGTTG+AGG + chr1_2:61123537-61123556 Msa0082290:intron 50.0%
! GTGAACGTAGGTTGAGGAGA+TGG + chr1_2:61123543-61123562 Msa0082290:intron 50.0%
! AACGTAGGTTGAGGAGATGG+TGG + chr1_2:61123546-61123565 Msa0082290:intron 50.0%
!!! TTTTGGGGTTTGTGGTTGGG+TGG + chr1_2:61123791-61123810 Msa0082290:intron 50.0%
TTTGTGGTTGGGTGGCACTT+GGG + chr1_2:61123799-61123818 Msa0082290:intron 50.0%
AGAAGGTTGAAGGAGAGGGA+GGG + chr1_2:61123984-61124003 Msa0082290:intron 50.0%
TTCCCTCATCGTAGCAGCTT+CGG - chr1_2:61124131-61124150 None:intergenic 50.0%
! CTACGATGAGGGAAAGCGTA+CGG + chr1_2:61124137-61124156 Msa0082290:CDS 50.0%
! ATGGATTATCACAGAGGGGC+CGG + chr1_2:61124174-61124193 Msa0082290:CDS 50.0%
! AAGCCACGGGTTGTTGTTGT+TGG + chr1_2:61124471-61124490 Msa0082290:intron 50.0%
ATGCCAACAACAACAACCCG+TGG - chr1_2:61124477-61124496 None:intergenic 50.0%
CTAATCGGTACCCTACATGC+AGG + chr1_2:61124516-61124535 Msa0082290:intron 50.0%
AAAGCGGCTCGCTGTGAATT+CGG + chr1_2:61124889-61124908 Msa0082290:intron 50.0%
AAATGTGCGGCATGCACATG+CGG - chr1_2:61125373-61125392 None:intergenic 50.0%
AGCTTCCAGTCACGTGCAAA+TGG - chr1_2:61125512-61125531 None:intergenic 50.0%
!! TGACTGGAAGCTTGTTAGCC+CGG + chr1_2:61125520-61125539 Msa0082290:intron 50.0%
TTATATGAGCTGGTCCACCC+GGG - chr1_2:61125541-61125560 None:intergenic 50.0%
TCCCCATCTTATACACGAGG+CGG - chr1_2:61125609-61125628 None:intergenic 50.0%
TGCTGCCATGCCTTTGGATT+TGG + chr1_2:61125725-61125744 Msa0082290:intron 50.0%
GGTCTAATGCGCCTTATGGA+AGG + chr1_2:61125800-61125819 Msa0082290:CDS 50.0%
CCACATGTTCCCCTTCCATA+AGG - chr1_2:61125814-61125833 None:intergenic 50.0%
CCTTATGGAAGGGGAACATG+TGG + chr1_2:61125811-61125830 Msa0082290:CDS 50.0%
CCGTTCAACCTTGGAAATCC+TGG + chr1_2:61125836-61125855 Msa0082290:CDS 50.0%
AGTCGGAAACCATTAGTGGG+AGG - chr1_2:61126412-61126431 None:intergenic 50.0%
CGGAAGTCGGAAACCATTAG+TGG - chr1_2:61126416-61126435 None:intergenic 50.0%
! TTTGGTGACCACAAGGAAGG+TGG + chr1_2:61126446-61126465 Msa0082290:CDS 50.0%
CATCAGATCCACCTTCCTTG+TGG - chr1_2:61126457-61126476 None:intergenic 50.0%
GTATGCTACCTCTACCTTCC+TGG + chr1_2:61126863-61126882 Msa0082290:three_prime_UTR 50.0%
AATTTGAACCCCGAGTGTCC+AGG - chr1_2:61126884-61126903 None:intergenic 50.0%
GCGCGTTGCTTATACACTGC+CGG - chr1_2:61122560-61122579 None:intergenic 55.0%
TCGTCCGGGAAGATTCCGTT+AGG + chr1_2:61122596-61122615 Msa0082290:CDS 55.0%
CGTCCGGGAAGATTCCGTTA+GGG + chr1_2:61122597-61122616 Msa0082290:CDS 55.0%
GGATAAAGAGGAAGGGGCTG+CGG + chr1_2:61122618-61122637 Msa0082290:CDS 55.0%
GTTCGTTGGGTCCCATCTAG+TGG + chr1_2:61122664-61122683 Msa0082290:CDS 55.0%
!! TGGATCGGTTGATGGCGAGA+GGG + chr1_2:61122684-61122703 Msa0082290:CDS 55.0%
TCCTCTGCAGCATCCTCAGA+AGG + chr1_2:61123109-61123128 Msa0082290:CDS 55.0%
! TCCTTCTGAGGATGCTGCAG+AGG - chr1_2:61123113-61123132 None:intergenic 55.0%
CCCCAGTAAGTCTCCTTCTG+AGG - chr1_2:61123125-61123144 None:intergenic 55.0%
GACAAGTGGAACGTGGCAAG+AGG + chr1_2:61123375-61123394 Msa0082290:intron 55.0%
! GTAGGTTGAGGAGATGGTGG+TGG + chr1_2:61123549-61123568 Msa0082290:intron 55.0%
GTTTGTGGTTGGGTGGCACT+TGG + chr1_2:61123798-61123817 Msa0082290:intron 55.0%
CAGAAGGTTGAAGGAGAGGG+AGG + chr1_2:61123983-61124002 Msa0082290:intron 55.0%
GAAGGAGAGGGAGGGCAATT+TGG + chr1_2:61123992-61124011 Msa0082290:intron 55.0%
TGTCCGAAGCTGCTACGATG+AGG + chr1_2:61124125-61124144 Msa0082290:CDS 55.0%
GTCCGAAGCTGCTACGATGA+GGG + chr1_2:61124126-61124145 Msa0082290:CDS 55.0%
TTCCTCAGCGCCTGCATGTA+GGG - chr1_2:61124529-61124548 None:intergenic 55.0%
!! GACTGGAAGCTTGTTAGCCC+GGG + chr1_2:61125521-61125540 Msa0082290:intron 55.0%
TGGCCGCCTCGTGTATAAGA+TGG + chr1_2:61125603-61125622 Msa0082290:intron 55.0%
GGCCGCCTCGTGTATAAGAT+GGG + chr1_2:61125604-61125623 Msa0082290:intron 55.0%
GCCGCCTCGTGTATAAGATG+GGG + chr1_2:61125605-61125624 Msa0082290:intron 55.0%
GGAGGGTCTAATGCGCCTTA+TGG + chr1_2:61125796-61125815 Msa0082290:CDS 55.0%
!! ATGCTAAGGAGCACCTTGGC+TGG + chr1_2:61126360-61126379 Msa0082290:CDS 55.0%
!! TGCTAAGGAGCACCTTGGCT+GGG + chr1_2:61126361-61126380 Msa0082290:CDS 55.0%
CCTCTACCTTCCTGGACACT+CGG + chr1_2:61126871-61126890 Msa0082290:three_prime_UTR 55.0%
CTCTACCTTCCTGGACACTC+GGG + chr1_2:61126872-61126891 Msa0082290:three_prime_UTR 55.0%
TCTACCTTCCTGGACACTCG+GGG + chr1_2:61126873-61126892 Msa0082290:three_prime_UTR 55.0%
! CCGGTGTGGTCTTTGACTCG+CGG - chr1_2:61122541-61122560 None:intergenic 60.0%
CCGCGAGTCAAAGACCACAC+CGG + chr1_2:61122538-61122557 Msa0082290:CDS 60.0%
GTATAAGCAACGCGCTGCCG+CGG + chr1_2:61122565-61122584 Msa0082290:CDS 60.0%
GATCGTGGTGACTGGTGGAG+CGG + chr1_2:61122640-61122659 Msa0082290:CDS 60.0%
ATCGTGGTGACTGGTGGAGC+GGG + chr1_2:61122641-61122660 Msa0082290:CDS 60.0%
!! GTGGATCGGTTGATGGCGAG+AGG + chr1_2:61122683-61122702 Msa0082290:CDS 60.0%
!! GGATCGGTTGATGGCGAGAG+GGG + chr1_2:61122685-61122704 Msa0082290:CDS 60.0%
! TACCCTACATGCAGGCGCTG+AGG + chr1_2:61124524-61124543 Msa0082290:intron 60.0%
CTTCCTCAGCGCCTGCATGT+AGG - chr1_2:61124530-61124549 None:intergenic 60.0%
!! CTACATGCAGGCGCTGAGGA+AGG + chr1_2:61124528-61124547 Msa0082290:intron 60.0%
!! TGGAAGCTTGTTAGCCCGGG+TGG + chr1_2:61125524-61125543 Msa0082290:intron 60.0%
CATGTGGGGCCGTTCAACCT+TGG + chr1_2:61125827-61125846 Msa0082290:CDS 60.0%
CCGAGTGTCCAGGAAGGTAG+AGG - chr1_2:61126874-61126893 None:intergenic 60.0%
TGAACCCCGAGTGTCCAGGA+AGG - chr1_2:61126880-61126899 None:intergenic 60.0%
GCCGCGGTGGTTCATTCGTC+CGG + chr1_2:61122581-61122600 Msa0082290:CDS 65.0%
CCCGGACGAATGAACCACCG+CGG - chr1_2:61122585-61122604 None:intergenic 65.0%
CCGCGGTGGTTCATTCGTCC+GGG + chr1_2:61122582-61122601 Msa0082290:CDS 65.0%
CTGCGGATCGTGGTGACTGG+TGG + chr1_2:61122635-61122654 Msa0082290:CDS 65.0%
TCGTGGTGACTGGTGGAGCG+GGG + chr1_2:61122642-61122661 Msa0082290:CDS 65.0%
ACTGGTGGAGCGGGGTTCGT+TGG + chr1_2:61122650-61122669 Msa0082290:CDS 65.0%
CTGGTGGAGCGGGGTTCGTT+GGG + chr1_2:61122651-61122670 Msa0082290:CDS 65.0%
TCACAGAGGGGCCGGTGTAG+AGG + chr1_2:61124182-61124201 Msa0082290:CDS 65.0%
GCACCTTGGCTGGGAACCCA+AGG + chr1_2:61126370-61126389 Msa0082290:CDS 65.0%
CCACCTTGGGTTCCCAGCCA+AGG - chr1_2:61126376-61126395 None:intergenic 65.0%
CCTTGGCTGGGAACCCAAGG+TGG + chr1_2:61126373-61126392 Msa0082290:CDS 65.0%
ACCCAAGGTGGACCTGCGCA+AGG + chr1_2:61126385-61126404 Msa0082290:CDS 65.0%
CCCTTGCGCAGGTCCACCTT+GGG - chr1_2:61126389-61126408 None:intergenic 65.0%
CCCAAGGTGGACCTGCGCAA+GGG + chr1_2:61126386-61126405 Msa0082290:CDS 65.0%
TTAGTGGGAGGCCCTTGCGC+AGG - chr1_2:61126400-61126419 None:intergenic 65.0%
GCGCAAGGGCCTCCCACTAA+TGG + chr1_2:61126400-61126419 Msa0082290:CDS 65.0%
TAAGCAACGCGCTGCCGCGG+TGG + chr1_2:61122568-61122587 Msa0082290:CDS 70.0%
GAGGAAGGGGCTGCGGATCG+TGG + chr1_2:61122625-61122644 Msa0082290:CDS 70.0%
GGGCTGCGGATCGTGGTGAC+TGG + chr1_2:61122632-61122651 Msa0082290:CDS 70.0%
GCCCTTGCGCAGGTCCACCT+TGG - chr1_2:61126390-61126409 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 61122284 61126920 61122284 ID=Msa0082290;Name=Msa0082290
chr1_2 mRNA 61122284 61126920 61122284 ID=Msa0082290-mRNA-1;Parent=Msa0082290;Name=Msa0082290-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.83|0.71|1|1|1|7|439|430
chr1_2 exon 61122284 61122886 61122284 ID=Msa0082290-mRNA-1:exon:20081;Parent=Msa0082290-mRNA-1
chr1_2 exon 61123017 61123161 61123017 ID=Msa0082290-mRNA-1:exon:20082;Parent=Msa0082290-mRNA-1
chr1_2 exon 61124124 61124203 61124124 ID=Msa0082290-mRNA-1:exon:20083;Parent=Msa0082290-mRNA-1
chr1_2 exon 61124341 61124424 61124341 ID=Msa0082290-mRNA-1:exon:20084;Parent=Msa0082290-mRNA-1
chr1_2 exon 61124538 61124612 61124538 ID=Msa0082290-mRNA-1:exon:20085;Parent=Msa0082290-mRNA-1
chr1_2 exon 61125794 61125886 61125794 ID=Msa0082290-mRNA-1:exon:20086;Parent=Msa0082290-mRNA-1
chr1_2 exon 61126269 61126920 61126269 ID=Msa0082290-mRNA-1:exon:20087;Parent=Msa0082290-mRNA-1
chr1_2 CDS 61122284 61122886 61122284 ID=Msa0082290-mRNA-1:cds;Parent=Msa0082290-mRNA-1
chr1_2 CDS 61123017 61123161 61123017 ID=Msa0082290-mRNA-1:cds;Parent=Msa0082290-mRNA-1
chr1_2 CDS 61124124 61124203 61124124 ID=Msa0082290-mRNA-1:cds;Parent=Msa0082290-mRNA-1
chr1_2 CDS 61124341 61124424 61124341 ID=Msa0082290-mRNA-1:cds;Parent=Msa0082290-mRNA-1
chr1_2 CDS 61124538 61124612 61124538 ID=Msa0082290-mRNA-1:cds;Parent=Msa0082290-mRNA-1
chr1_2 CDS 61125794 61125886 61125794 ID=Msa0082290-mRNA-1:cds;Parent=Msa0082290-mRNA-1
chr1_2 CDS 61126269 61126481 61126269 ID=Msa0082290-mRNA-1:cds;Parent=Msa0082290-mRNA-1
chr1_2 three_prime_UTR 61126482 61126920 61126482 ID=Msa0082290-mRNA-1:three_prime_utr;Parent=Msa0082290-mRNA-1
Gene Sequence

>Msa0082290

ATGAGTTCAGAATTGACTTTCAGAGGACACGAAACTCAGCAAGTCAACGATGAATACTCACCAAAACCAAACAAACCATGGCTCTCTGTAATTCGTCCGATTCGTTACATGCTTCGTGAACAACGACTCGTTTTCGTCTTGATCGGAATCGTCATCGCATCCGTATTCTTCACAATCATACCTTCATCTTCAACTTCTTCATCTTCATCATTCTCAACCCGTCCATACGAATCAGACTCGATCTCTTACTTCGACCGCGAGTCAAAGACCACACCGGCAGTGTATAAGCAACGCGCTGCCGCGGTGGTTCATTCGTCCGGGAAGATTCCGTTAGGGATAAAGAGGAAGGGGCTGCGGATCGTGGTGACTGGTGGAGCGGGGTTCGTTGGGTCCCATCTAGTGGATCGGTTGATGGCGAGAGGGGACAGTGTGATTGTTGTTGATAATTTCTTCACTGGTAGAAAGGAGAACGTTATGCATCATTTTGGTAATCCGAGATTTGAGCTTATTCGACACGACGTCGTTGAGCCTCTTCTTCTTGAAGTTGATCAGATCTATCATCTTGCTTGTCCTGCTTCTCCTGTTCATTACAAGTTCAACCCCACGAATGTGGTGGGAACATTGAACATGCTTGGATTGGCGAAAAGAGTTGGAGCTAGATTCTTGCTAACAAGTACAAGTGAGGTCTATGGTGATCCTCTGCAGCATCCTCAGAAGGAGACTTACTGGGGAAACGTTAATCCAATTGGTGTCCGAAGCTGCTACGATGAGGGAAAGCGTACGGCTGAGACATTGACTATGGATTATCACAGAGGGGCCGGTGTAGAGGTTAGAATTGCTAGGATCTTTAATACATATGGACCCAGAATGTGCTTAGATGATGGACGTGTCGTTAGTAACTTCGTTGCTCAGGCGCTGAGGAAGGAGCCTTTGACAGTTTATGGGGATGGGAAGCAGACTAGAAGTTTCCAATACGTCTCTGACTTGGTGGAGGGTCTAATGCGCCTTATGGAAGGGGAACATGTGGGGCCGTTCAACCTTGGAAATCCTGGTGAATTTACCATGCTTGAACTTGCCAAGGTGGTCCAAGAAACAATCGACCCAGATGCAAAGATAGTGTACAGAGATAATACAGAGGATGACCCACACAAAAGAAAGCCTGATATTAGTAATGCTAAGGAGCACCTTGGCTGGGAACCCAAGGTGGACCTGCGCAAGGGCCTCCCACTAATGGTTTCCGACTTCCGACAACGCATTTTTGGTGACCACAAGGAAGGTGGATCTGATGCCTAA
Protein sequence

>Msa0082290

MSSELTFRGHETQQVNDEYSPKPNKPWLSVIRPIRYMLREQRLVFVLIGIVIASVFFTIIPSSSTSSSSSFSTRPYESDSISYFDRESKTTPAVYKQRAAAVVHSSGKIPLGIKRKGLRIVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPDAKIVYRDNTEDDPHKRKPDISNAKEHLGWEPKVDLRKGLPLMVSDFRQRIFGDHKEGGSDA*