Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577020 | KEH20951.1 | 92.279 | 272 | 14 | 1 | 1 | 272 | 1 | 265 | 3.82e-180 | 515 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577020 | sp|A5EY31|GATA_DICNV | 38.532 | 109 | 67 | 0 | 164 | 272 | 3 | 111 | 1.03e-13 | 73.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577020 | A0A072TUX3 | 92.279 | 272 | 14 | 1 | 1 | 272 | 1 | 265 | 1.83e-180 | 515 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0576810 | Msa0577020 | 0.873098 | 1.912689e-67 | -8.615850e-47 |
| Msa0577020 | Msa0706250 | 0.804764 | 1.846903e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577020 | MtrunA17_Chr8g0385461 | 92.279 | 272 | 14 | 1 | 1 | 272 | 1 | 265 | 0.0 | 515 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577020 | AT5G07360.2 | 64.039 | 203 | 73 | 0 | 70 | 272 | 105 | 307 | 1.83e-89 | 278 |
| Msa0577020 | AT5G07360.1 | 64.039 | 203 | 73 | 0 | 70 | 272 | 105 | 307 | 2.22e-89 | 278 |
| Msa0577020 | AT5G07360.3 | 64.039 | 203 | 73 | 0 | 70 | 272 | 105 | 307 | 2.22e-89 | 278 |
Find 62 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTTCATGGGATTCCTTA+TGG | 0.207420 | 4_1:-81198865 | Msa0577020:CDS |
| GCAATATCTTCTTCAGATTC+TGG | 0.244608 | 4_1:+81199567 | None:intergenic |
| GTTCATATATCCTTCTATTT+CGG | 0.304318 | 4_1:-81199601 | Msa0577020:CDS |
| TTTAACCAGGTTCTTGAGTT+AGG | 0.324762 | 4_1:-81199423 | Msa0577020:intron |
| GGTTCAGAAACTGCATTTAC+AGG | 0.333670 | 4_1:+81200823 | None:intergenic |
| AGAAGGATATATGAACCTTT+TGG | 0.336084 | 4_1:+81199608 | None:intergenic |
| AGAAGCTACAAGTTCTCTAT+TGG | 0.343289 | 4_1:+81199707 | None:intergenic |
| GTTACTACAGCTTCAAGAAT+AGG | 0.347909 | 4_1:+81199213 | None:intergenic |
| TGGAAGCTTGGATCTATAAA+AGG | 0.349207 | 4_1:-81198765 | Msa0577020:CDS |
| TTCATTGAAGGGCCTCTTCA+TGG | 0.352867 | 4_1:-81198877 | Msa0577020:intron |
| ACTTGATGCCAACTTCTTCA+AGG | 0.382626 | 4_1:-81199861 | Msa0577020:CDS |
| CTTAGCCAAGGAGTCTATCT+AGG | 0.384637 | 4_1:-81199141 | Msa0577020:intron |
| TTCAGAATTGAACCTGGGTC+TGG | 0.387904 | 4_1:+81200900 | None:intergenic |
| GTAAACCTAAGGAACATCTT+AGG | 0.389631 | 4_1:+81199882 | None:intergenic |
| GTTCTTCAACATGCTTTCTT+CGG | 0.400483 | 4_1:+81200855 | None:intergenic |
| CTCCGTATCTCCGAAATAGA+AGG | 0.418422 | 4_1:+81199591 | None:intergenic |
| CCCTGCCTAAGATGTTCCTT+AGG | 0.419921 | 4_1:-81199887 | Msa0577020:CDS |
| TGGGATTCCTTATGGATTGA+AGG | 0.421366 | 4_1:-81198857 | Msa0577020:CDS |
| CTGATCATCCTTGAAGAAGT+TGG | 0.448974 | 4_1:+81199853 | None:intergenic |
| CAACTTCTTCAAGGATGATC+AGG | 0.452601 | 4_1:-81199852 | Msa0577020:intron |
| ATCCTTCTATTTCGGAGATA+CGG | 0.461533 | 4_1:-81199593 | Msa0577020:CDS |
| GAACTTGTAGCTTCTAAGAA+TGG | 0.462031 | 4_1:-81199699 | Msa0577020:CDS |
| AGTAACTTATACAGAAGAAC+TGG | 0.464189 | 4_1:-81199196 | Msa0577020:CDS |
| TCATTGAAGGGCCTCTTCAT+GGG | 0.464627 | 4_1:-81198876 | Msa0577020:intron |
| ACCTAAGGAACATCTTAGGC+AGG | 0.478047 | 4_1:+81199886 | None:intergenic |
| CAGTTCACTGCGCAACCAAA+AGG | 0.481855 | 4_1:-81199623 | Msa0577020:CDS |
| TCAGAATTGAACCTGGGTCT+GGG | 0.482683 | 4_1:+81200901 | None:intergenic |
| TGAGGAAGGATATGCGAGAA+GGG | 0.489622 | 4_1:+81200723 | None:intergenic |
| CCGACACGTGGCAGAGGTGG+TGG | 0.497482 | 4_1:-81200802 | Msa0577020:CDS |
| ATTATGTCCTTCAATCCATA+AGG | 0.498873 | 4_1:+81198850 | None:intergenic |
| AACTAAACAAATTACTTCGC+AGG | 0.517999 | 4_1:-81199388 | Msa0577020:CDS |
| GTGAGGAAGGATATGCGAGA+AGG | 0.530767 | 4_1:+81200722 | None:intergenic |
| TTAGATTGACGAGATTGCTA+AGG | 0.531406 | 4_1:-81199763 | Msa0577020:intron |
| AACAACCTAGATAGACTCCT+TGG | 0.539798 | 4_1:+81199136 | None:intergenic |
| GAAGAACAAAGTGGTGAGGA+AGG | 0.544988 | 4_1:+81200709 | None:intergenic |
| CAATCCGCACTGAAAACTAA+AGG | 0.546483 | 4_1:+81199657 | None:intergenic |
| GCACTGAAAACTAAAGGTGA+TGG | 0.561148 | 4_1:+81199663 | None:intergenic |
| GTTGGCATCAAGTAAACCTA+AGG | 0.563829 | 4_1:+81199871 | None:intergenic |
| TAGATTGACGAGATTGCTAA+GGG | 0.573146 | 4_1:-81199762 | Msa0577020:CDS |
| AAGTTATTGACATGGAAGCT+TGG | 0.574781 | 4_1:-81198777 | Msa0577020:CDS |
| ACAAGTAGAATTACCATGAT+CGG | 0.577662 | 4_1:+81200673 | None:intergenic |
| TCTGAACCGACACGTGGCAG+AGG | 0.581655 | 4_1:-81200808 | Msa0577020:CDS |
| GTAGAATTACCATGATCGGT+TGG | 0.583196 | 4_1:+81200677 | None:intergenic |
| AGCTTACACAAATATTCTTG+CGG | 0.595183 | 4_1:-81199365 | Msa0577020:CDS |
| TTGTAGCTTCTAAGAATGGA+GGG | 0.595333 | 4_1:-81199695 | Msa0577020:CDS |
| GAACCGACACGTGGCAGAGG+TGG | 0.595634 | 4_1:-81200805 | Msa0577020:CDS |
| CTTGTAGCTTCTAAGAATGG+AGG | 0.602574 | 4_1:-81199696 | Msa0577020:CDS |
| GCTGATGAATTGCTTAGCCA+AGG | 0.603099 | 4_1:-81199153 | Msa0577020:CDS |
| CCTAAGGAACATCTTAGGCA+GGG | 0.603224 | 4_1:+81199887 | None:intergenic |
| TGCCAGAATACAAAACAACA+TGG | 0.604012 | 4_1:-81198822 | Msa0577020:CDS |
| GCCAGAATACAAAACAACAT+GGG | 0.614131 | 4_1:-81198821 | Msa0577020:CDS |
| CAGAGTTCAGAATTGAACCT+GGG | 0.618362 | 4_1:+81200895 | None:intergenic |
| GTTGGAAGAACAAAGTGGTG+AGG | 0.621389 | 4_1:+81200705 | None:intergenic |
| AAGAAAGAACTCCCAGACCC+AGG | 0.623595 | 4_1:-81200912 | Msa0577020:five_prime_UTR |
| TCAGAGTTCAGAATTGAACC+TGG | 0.624654 | 4_1:+81200894 | None:intergenic |
| CCACCACCTCTGCCACGTGT+CGG | 0.626864 | 4_1:+81200802 | None:intergenic |
| CCATAAGGAATCCCATGAAG+AGG | 0.635203 | 4_1:+81198865 | None:intergenic |
| GAGGAAGGATATGCGAGAAG+GGG | 0.635335 | 4_1:+81200724 | None:intergenic |
| AACTCTGAACTTAACGAGAG+CGG | 0.655935 | 4_1:-81200879 | Msa0577020:five_prime_UTR |
| CCAGAATACAAAACAACATG+GGG | 0.665616 | 4_1:-81198820 | Msa0577020:CDS |
| ATATGCGAGAAGGGGAACAA+CGG | 0.666354 | 4_1:+81200732 | None:intergenic |
| GCAGTTTCTGAACCGACACG+TGG | 0.699421 | 4_1:-81200814 | Msa0577020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAATAACATTTTTTTTTA+AGG | - | chr4_1:81198831-81198850 | Msa0577020:CDS | 10.0% |
| !! | ACAATTAATTCATTAATTTA+TGG | + | chr4_1:81199234-81199253 | None:intergenic | 10.0% |
| !!! | TACAATTAAAATCAATTTTT+CGG | + | chr4_1:81200334-81200353 | None:intergenic | 10.0% |
| !!! | ATCAATAACATTTTTTTTTA+AGG | - | chr4_1:81198831-81198850 | Msa0577020:CDS | 10.0% |
| !! | ACAATTAATTCATTAATTTA+TGG | + | chr4_1:81199234-81199253 | None:intergenic | 10.0% |
| !!! | TACAATTAAAATCAATTTTT+CGG | + | chr4_1:81200334-81200353 | None:intergenic | 10.0% |
| !!! | TATTTTTTTTAATAGAGGAA+AGG | + | chr4_1:81199444-81199463 | None:intergenic | 15.0% |
| !! | AGAGTAAATATTTCAAAAAT+TGG | + | chr4_1:81200537-81200556 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTAATAGAGGAA+AGG | + | chr4_1:81199444-81199463 | None:intergenic | 15.0% |
| !! | AGAGTAAATATTTCAAAAAT+TGG | + | chr4_1:81200537-81200556 | None:intergenic | 15.0% |
| !! | TTAGAATCGTAAAAAGAATA+TGG | - | chr4_1:81199319-81199338 | Msa0577020:intron | 20.0% |
| !!! | GCTGATATTTTTTTTAATAG+AGG | + | chr4_1:81199449-81199468 | None:intergenic | 20.0% |
| !!! | ATGTTTATGTCATCTTTTAT+CGG | + | chr4_1:81199661-81199680 | None:intergenic | 20.0% |
| !!! | GATGTAATTATTTTATCATG+AGG | - | chr4_1:81200357-81200376 | Msa0577020:intron | 20.0% |
| !! | ATACAAGATGAATAGAAATT+AGG | - | chr4_1:81200769-81200788 | Msa0577020:CDS | 20.0% |
| !!! | TCTTTTAAATAGTACTTTTG+CGG | - | chr4_1:81200829-81200848 | Msa0577020:CDS | 20.0% |
| !!! | TAAATTTTGGTTTTCATTGA+AGG | - | chr4_1:81200951-81200970 | Msa0577020:intron | 20.0% |
| !!! | AAATTTTGGTTTTCATTGAA+GGG | - | chr4_1:81200952-81200971 | Msa0577020:intron | 20.0% |
| !! | TAAAAATCAAGTTATTGACA+TGG | - | chr4_1:81201055-81201074 | Msa0577020:five_prime_UTR | 20.0% |
| !! | TTAGAATCGTAAAAAGAATA+TGG | - | chr4_1:81199319-81199338 | Msa0577020:intron | 20.0% |
| !!! | GCTGATATTTTTTTTAATAG+AGG | + | chr4_1:81199449-81199468 | None:intergenic | 20.0% |
| !!! | ATGTTTATGTCATCTTTTAT+CGG | + | chr4_1:81199661-81199680 | None:intergenic | 20.0% |
| !!! | GATGTAATTATTTTATCATG+AGG | - | chr4_1:81200357-81200376 | Msa0577020:intron | 20.0% |
| !! | ATACAAGATGAATAGAAATT+AGG | - | chr4_1:81200769-81200788 | Msa0577020:CDS | 20.0% |
| !!! | TCTTTTAAATAGTACTTTTG+CGG | - | chr4_1:81200829-81200848 | Msa0577020:CDS | 20.0% |
| !!! | TAAATTTTGGTTTTCATTGA+AGG | - | chr4_1:81200951-81200970 | Msa0577020:intron | 20.0% |
| !!! | AAATTTTGGTTTTCATTGAA+GGG | - | chr4_1:81200952-81200971 | Msa0577020:intron | 20.0% |
| !! | TAAAAATCAAGTTATTGACA+TGG | - | chr4_1:81201055-81201074 | Msa0577020:five_prime_UTR | 20.0% |
| ! | CTATATCCAAATCTAACATA+GGG | + | chr4_1:81199485-81199504 | None:intergenic | 25.0% |
| ! | ACTATATCCAAATCTAACAT+AGG | + | chr4_1:81199486-81199505 | None:intergenic | 25.0% |
| ! | TGTAACTAATTCAATAACAG+AGG | - | chr4_1:81199513-81199532 | Msa0577020:intron | 25.0% |
| ! | ATGAAAATAACGAGCTATAT+AGG | + | chr4_1:81199856-81199875 | None:intergenic | 25.0% |
| !!! | TTTCCTATTTGTTATCAATC+AGG | - | chr4_1:81199886-81199905 | Msa0577020:CDS | 25.0% |
| !!! | TTCCTATTTGTTATCAATCA+GGG | - | chr4_1:81199887-81199906 | Msa0577020:CDS | 25.0% |
| !! | GCAAAATCAATTTTCAGATA+AGG | - | chr4_1:81199919-81199938 | Msa0577020:CDS | 25.0% |
| !!! | TAATTTCGATTTTGATGACT+TGG | - | chr4_1:81200011-81200030 | Msa0577020:intron | 25.0% |
| !!! | TCTCTATTGGCTTTTATAAT+TGG | + | chr4_1:81200123-81200142 | None:intergenic | 25.0% |
| ! | GTTCATATATCCTTCTATTT+CGG | - | chr4_1:81200239-81200258 | Msa0577020:intron | 25.0% |
| ! | AACCTGGTTAAAAACAAATA+GGG | + | chr4_1:81200409-81200428 | None:intergenic | 25.0% |
| ! | TCTTAATTAACTTTATCTCC+TGG | - | chr4_1:81200585-81200604 | Msa0577020:intron | 25.0% |
| ! | CTATATCCAAATCTAACATA+GGG | + | chr4_1:81199485-81199504 | None:intergenic | 25.0% |
| ! | ACTATATCCAAATCTAACAT+AGG | + | chr4_1:81199486-81199505 | None:intergenic | 25.0% |
| ! | TGTAACTAATTCAATAACAG+AGG | - | chr4_1:81199513-81199532 | Msa0577020:intron | 25.0% |
| ! | ATGAAAATAACGAGCTATAT+AGG | + | chr4_1:81199856-81199875 | None:intergenic | 25.0% |
| !!! | TTTCCTATTTGTTATCAATC+AGG | - | chr4_1:81199886-81199905 | Msa0577020:CDS | 25.0% |
| !!! | TTCCTATTTGTTATCAATCA+GGG | - | chr4_1:81199887-81199906 | Msa0577020:CDS | 25.0% |
| !! | GCAAAATCAATTTTCAGATA+AGG | - | chr4_1:81199919-81199938 | Msa0577020:CDS | 25.0% |
| !!! | TAATTTCGATTTTGATGACT+TGG | - | chr4_1:81200011-81200030 | Msa0577020:intron | 25.0% |
| !!! | TCTCTATTGGCTTTTATAAT+TGG | + | chr4_1:81200123-81200142 | None:intergenic | 25.0% |
| ! | GTTCATATATCCTTCTATTT+CGG | - | chr4_1:81200239-81200258 | Msa0577020:intron | 25.0% |
| ! | AACCTGGTTAAAAACAAATA+GGG | + | chr4_1:81200409-81200428 | None:intergenic | 25.0% |
| ! | TCTTAATTAACTTTATCTCC+TGG | - | chr4_1:81200585-81200604 | Msa0577020:intron | 25.0% |
| TGATGATAAGATCATACAGT+AGG | + | chr4_1:81198807-81198826 | None:intergenic | 30.0% | |
| ! | TTTTTGTTGGAAGAACAAAG+TGG | + | chr4_1:81199143-81199162 | None:intergenic | 30.0% |
| ACAAGTAGAATTACCATGAT+CGG | + | chr4_1:81199170-81199189 | None:intergenic | 30.0% | |
| TTGTTTGAGTGAATTACCAA+AGG | - | chr4_1:81199411-81199430 | Msa0577020:CDS | 30.0% | |
| ACTAAACCCTATGTTAGATT+TGG | - | chr4_1:81199476-81199495 | Msa0577020:intron | 30.0% | |
| !! | GTTGTTTTCATTAGCTATCT+TGG | + | chr4_1:81199711-81199730 | None:intergenic | 30.0% |
| ! | TTCCCTGATTGATAACAAAT+AGG | + | chr4_1:81199892-81199911 | None:intergenic | 30.0% |
| ! | AGAAGGATATATGAACCTTT+TGG | + | chr4_1:81200235-81200254 | None:intergenic | 30.0% |
| ! | ATGAGGTACTATTTCATGAT+TGG | - | chr4_1:81200374-81200393 | Msa0577020:intron | 30.0% |
| !!! | TTCCCTATTTGTTTTTAACC+AGG | - | chr4_1:81200404-81200423 | Msa0577020:intron | 30.0% |
| GAACCTGGTTAAAAACAAAT+AGG | + | chr4_1:81200410-81200429 | None:intergenic | 30.0% | |
| AACTAAACAAATTACTTCGC+AGG | - | chr4_1:81200452-81200471 | Msa0577020:intron | 30.0% | |
| AGCTTACACAAATATTCTTG+CGG | - | chr4_1:81200475-81200494 | Msa0577020:intron | 30.0% | |
| GGAGAATGAAAAAGTAGTAT+CGG | - | chr4_1:81200496-81200515 | Msa0577020:intron | 30.0% | |
| AGTAACTTATACAGAAGAAC+TGG | - | chr4_1:81200644-81200663 | Msa0577020:intron | 30.0% | |
| TGTTCATAACTTTACACTCT+AGG | + | chr4_1:81200737-81200756 | None:intergenic | 30.0% | |
| TTCTATTCATCTTGTATAGC+AGG | + | chr4_1:81200766-81200785 | None:intergenic | 30.0% | |
| ATTATGTCCTTCAATCCATA+AGG | + | chr4_1:81200993-81201012 | None:intergenic | 30.0% | |
| TGATGATAAGATCATACAGT+AGG | + | chr4_1:81198807-81198826 | None:intergenic | 30.0% | |
| ! | TTTTTGTTGGAAGAACAAAG+TGG | + | chr4_1:81199143-81199162 | None:intergenic | 30.0% |
| ACAAGTAGAATTACCATGAT+CGG | + | chr4_1:81199170-81199189 | None:intergenic | 30.0% | |
| TTGTTTGAGTGAATTACCAA+AGG | - | chr4_1:81199411-81199430 | Msa0577020:CDS | 30.0% | |
| ACTAAACCCTATGTTAGATT+TGG | - | chr4_1:81199476-81199495 | Msa0577020:intron | 30.0% | |
| !! | GTTGTTTTCATTAGCTATCT+TGG | + | chr4_1:81199711-81199730 | None:intergenic | 30.0% |
| ! | TTCCCTGATTGATAACAAAT+AGG | + | chr4_1:81199892-81199911 | None:intergenic | 30.0% |
| ! | AGAAGGATATATGAACCTTT+TGG | + | chr4_1:81200235-81200254 | None:intergenic | 30.0% |
| ! | ATGAGGTACTATTTCATGAT+TGG | - | chr4_1:81200374-81200393 | Msa0577020:intron | 30.0% |
| !!! | TTCCCTATTTGTTTTTAACC+AGG | - | chr4_1:81200404-81200423 | Msa0577020:intron | 30.0% |
| GAACCTGGTTAAAAACAAAT+AGG | + | chr4_1:81200410-81200429 | None:intergenic | 30.0% | |
| AACTAAACAAATTACTTCGC+AGG | - | chr4_1:81200452-81200471 | Msa0577020:intron | 30.0% | |
| AGCTTACACAAATATTCTTG+CGG | - | chr4_1:81200475-81200494 | Msa0577020:intron | 30.0% | |
| GGAGAATGAAAAAGTAGTAT+CGG | - | chr4_1:81200496-81200515 | Msa0577020:intron | 30.0% | |
| AGTAACTTATACAGAAGAAC+TGG | - | chr4_1:81200644-81200663 | Msa0577020:intron | 30.0% | |
| TGTTCATAACTTTACACTCT+AGG | + | chr4_1:81200737-81200756 | None:intergenic | 30.0% | |
| TTCTATTCATCTTGTATAGC+AGG | + | chr4_1:81200766-81200785 | None:intergenic | 30.0% | |
| ATTATGTCCTTCAATCCATA+AGG | + | chr4_1:81200993-81201012 | None:intergenic | 30.0% | |
| GTTCTTCAACATGCTTTCTT+CGG | + | chr4_1:81198988-81199007 | None:intergenic | 35.0% | |
| AACCTGTTGTACATTTGTCA+GGG | + | chr4_1:81199301-81199320 | None:intergenic | 35.0% | |
| TAACCTGTTGTACATTTGTC+AGG | + | chr4_1:81199302-81199321 | None:intergenic | 35.0% | |
| ACTAACTAACCTGCAATTTG+CGG | + | chr4_1:81199356-81199375 | None:intergenic | 35.0% | |
| ! | CAGGTTAGTTAGTTAGTTAG+TGG | - | chr4_1:81199363-81199382 | Msa0577020:CDS | 35.0% |
| TGGTAATTCACTCAAACAAG+TGG | + | chr4_1:81199410-81199429 | None:intergenic | 35.0% | |
| GATGTGATGAACTGTAATGT+TGG | - | chr4_1:81199555-81199574 | Msa0577020:intron | 35.0% | |
| ! | GATGAACTGTAATGTTGGTT+TGG | - | chr4_1:81199560-81199579 | Msa0577020:CDS | 35.0% |
| ! | ATGTCATCTTTTATCGGATG+TGG | + | chr4_1:81199655-81199674 | None:intergenic | 35.0% |
| TCAAGTTCTTTAGCCAAACA+TGG | - | chr4_1:81199811-81199830 | Msa0577020:intron | 35.0% | |
| TGCAAAATTTGAGCCATGTT+TGG | + | chr4_1:81199827-81199846 | None:intergenic | 35.0% | |
| GTAAACCTAAGGAACATCTT+AGG | + | chr4_1:81199961-81199980 | None:intergenic | 35.0% | |
| TTAGATTGACGAGATTGCTA+AGG | - | chr4_1:81200077-81200096 | Msa0577020:intron | 35.0% | |
| TAGATTGACGAGATTGCTAA+GGG | - | chr4_1:81200078-81200097 | Msa0577020:intron | 35.0% | |
| AGAAGCTACAAGTTCTCTAT+TGG | + | chr4_1:81200136-81200155 | None:intergenic | 35.0% | |
| ! | GAACTTGTAGCTTCTAAGAA+TGG | - | chr4_1:81200141-81200160 | Msa0577020:intron | 35.0% |
| ! | TTGTAGCTTCTAAGAATGGA+GGG | - | chr4_1:81200145-81200164 | Msa0577020:intron | 35.0% |
| !!! | ATCACCTTTAGTTTTCAGTG+CGG | - | chr4_1:81200179-81200198 | Msa0577020:intron | 35.0% |
| !!! | TTTAGTTTTCAGTGCGGATT+GGG | - | chr4_1:81200185-81200204 | Msa0577020:intron | 35.0% |
| ATCCTTCTATTTCGGAGATA+CGG | - | chr4_1:81200247-81200266 | Msa0577020:intron | 35.0% | |
| GCAATATCTTCTTCAGATTC+TGG | + | chr4_1:81200276-81200295 | None:intergenic | 35.0% | |
| TTTAACCAGGTTCTTGAGTT+AGG | - | chr4_1:81200417-81200436 | Msa0577020:intron | 35.0% | |
| TTCAAGAATAGGATTGTACC+TGG | + | chr4_1:81200619-81200638 | None:intergenic | 35.0% | |
| GTTACTACAGCTTCAAGAAT+AGG | + | chr4_1:81200630-81200649 | None:intergenic | 35.0% | |
| CATATACAGTACATCCCAAA+AGG | + | chr4_1:81200900-81200919 | None:intergenic | 35.0% | |
| TGCCAGAATACAAAACAACA+TGG | - | chr4_1:81201018-81201037 | Msa0577020:intron | 35.0% | |
| GCCAGAATACAAAACAACAT+GGG | - | chr4_1:81201019-81201038 | Msa0577020:intron | 35.0% | |
| CCAGAATACAAAACAACATG+GGG | - | chr4_1:81201020-81201039 | Msa0577020:intron | 35.0% | |
| AAGTTATTGACATGGAAGCT+TGG | - | chr4_1:81201063-81201082 | Msa0577020:five_prime_UTR | 35.0% | |
| TGGAAGCTTGGATCTATAAA+AGG | - | chr4_1:81201075-81201094 | Msa0577020:five_prime_UTR | 35.0% | |
| GTTCTTCAACATGCTTTCTT+CGG | + | chr4_1:81198988-81199007 | None:intergenic | 35.0% | |
| AACCTGTTGTACATTTGTCA+GGG | + | chr4_1:81199301-81199320 | None:intergenic | 35.0% | |
| TAACCTGTTGTACATTTGTC+AGG | + | chr4_1:81199302-81199321 | None:intergenic | 35.0% | |
| ACTAACTAACCTGCAATTTG+CGG | + | chr4_1:81199356-81199375 | None:intergenic | 35.0% | |
| ! | CAGGTTAGTTAGTTAGTTAG+TGG | - | chr4_1:81199363-81199382 | Msa0577020:CDS | 35.0% |
| TGGTAATTCACTCAAACAAG+TGG | + | chr4_1:81199410-81199429 | None:intergenic | 35.0% | |
| GATGTGATGAACTGTAATGT+TGG | - | chr4_1:81199555-81199574 | Msa0577020:intron | 35.0% | |
| ! | GATGAACTGTAATGTTGGTT+TGG | - | chr4_1:81199560-81199579 | Msa0577020:CDS | 35.0% |
| ! | ATGTCATCTTTTATCGGATG+TGG | + | chr4_1:81199655-81199674 | None:intergenic | 35.0% |
| TCAAGTTCTTTAGCCAAACA+TGG | - | chr4_1:81199811-81199830 | Msa0577020:intron | 35.0% | |
| TGCAAAATTTGAGCCATGTT+TGG | + | chr4_1:81199827-81199846 | None:intergenic | 35.0% | |
| GTAAACCTAAGGAACATCTT+AGG | + | chr4_1:81199961-81199980 | None:intergenic | 35.0% | |
| TTAGATTGACGAGATTGCTA+AGG | - | chr4_1:81200077-81200096 | Msa0577020:intron | 35.0% | |
| TAGATTGACGAGATTGCTAA+GGG | - | chr4_1:81200078-81200097 | Msa0577020:intron | 35.0% | |
| AGAAGCTACAAGTTCTCTAT+TGG | + | chr4_1:81200136-81200155 | None:intergenic | 35.0% | |
| ! | GAACTTGTAGCTTCTAAGAA+TGG | - | chr4_1:81200141-81200160 | Msa0577020:intron | 35.0% |
| ! | TTGTAGCTTCTAAGAATGGA+GGG | - | chr4_1:81200145-81200164 | Msa0577020:intron | 35.0% |
| !!! | ATCACCTTTAGTTTTCAGTG+CGG | - | chr4_1:81200179-81200198 | Msa0577020:intron | 35.0% |
| !!! | TTTAGTTTTCAGTGCGGATT+GGG | - | chr4_1:81200185-81200204 | Msa0577020:intron | 35.0% |
| ATCCTTCTATTTCGGAGATA+CGG | - | chr4_1:81200247-81200266 | Msa0577020:intron | 35.0% | |
| GCAATATCTTCTTCAGATTC+TGG | + | chr4_1:81200276-81200295 | None:intergenic | 35.0% | |
| TTTAACCAGGTTCTTGAGTT+AGG | - | chr4_1:81200417-81200436 | Msa0577020:intron | 35.0% | |
| TTCAAGAATAGGATTGTACC+TGG | + | chr4_1:81200619-81200638 | None:intergenic | 35.0% | |
| GTTACTACAGCTTCAAGAAT+AGG | + | chr4_1:81200630-81200649 | None:intergenic | 35.0% | |
| CATATACAGTACATCCCAAA+AGG | + | chr4_1:81200900-81200919 | None:intergenic | 35.0% | |
| TGCCAGAATACAAAACAACA+TGG | - | chr4_1:81201018-81201037 | Msa0577020:intron | 35.0% | |
| GCCAGAATACAAAACAACAT+GGG | - | chr4_1:81201019-81201038 | Msa0577020:intron | 35.0% | |
| CCAGAATACAAAACAACATG+GGG | - | chr4_1:81201020-81201039 | Msa0577020:intron | 35.0% | |
| AAGTTATTGACATGGAAGCT+TGG | - | chr4_1:81201063-81201082 | Msa0577020:five_prime_UTR | 35.0% | |
| TGGAAGCTTGGATCTATAAA+AGG | - | chr4_1:81201075-81201094 | Msa0577020:five_prime_UTR | 35.0% | |
| CAGAGTTCAGAATTGAACCT+GGG | + | chr4_1:81198948-81198967 | None:intergenic | 40.0% | |
| TCAGAGTTCAGAATTGAACC+TGG | + | chr4_1:81198949-81198968 | None:intergenic | 40.0% | |
| AACTCTGAACTTAACGAGAG+CGG | - | chr4_1:81198961-81198980 | Msa0577020:intron | 40.0% | |
| GGTTCAGAAACTGCATTTAC+AGG | + | chr4_1:81199020-81199039 | None:intergenic | 40.0% | |
| !!! | CATGATCGGTTGGTTTTTGT+TGG | + | chr4_1:81199156-81199175 | None:intergenic | 40.0% |
| CAACAAAAACCAACCGATCA+TGG | - | chr4_1:81199154-81199173 | Msa0577020:CDS | 40.0% | |
| GTAGAATTACCATGATCGGT+TGG | + | chr4_1:81199166-81199185 | None:intergenic | 40.0% | |
| TGGACAGTAAGAAACAGAGT+TGG | + | chr4_1:81199214-81199233 | None:intergenic | 40.0% | |
| ACCTGTTGTACATTTGTCAG+GGG | + | chr4_1:81199300-81199319 | None:intergenic | 40.0% | |
| AATATTCTGCCGCAAATTGC+AGG | - | chr4_1:81199344-81199363 | Msa0577020:intron | 40.0% | |
| TGACTGTTGCTCTTGAACTT+GGG | + | chr4_1:81199589-81199608 | None:intergenic | 40.0% | |
| GTTGGCATCAAGTAAACCTA+AGG | + | chr4_1:81199972-81199991 | None:intergenic | 40.0% | |
| ACTTGATGCCAACTTCTTCA+AGG | - | chr4_1:81199979-81199998 | Msa0577020:intron | 40.0% | |
| CTGATCATCCTTGAAGAAGT+TGG | + | chr4_1:81199990-81200009 | None:intergenic | 40.0% | |
| CAACTTCTTCAAGGATGATC+AGG | - | chr4_1:81199988-81200007 | Msa0577020:intron | 40.0% | |
| ! | GAGTTGTTACAGTTGATGCT+TGG | - | chr4_1:81200033-81200052 | Msa0577020:intron | 40.0% |
| ! | TTGTTACAGTTGATGCTTGG+TGG | - | chr4_1:81200036-81200055 | Msa0577020:intron | 40.0% |
| AGCAATCTCGTCAATCTAAG+AGG | + | chr4_1:81200076-81200095 | None:intergenic | 40.0% | |
| ! | CTTGTAGCTTCTAAGAATGG+AGG | - | chr4_1:81200144-81200163 | Msa0577020:intron | 40.0% |
| GCACTGAAAACTAAAGGTGA+TGG | + | chr4_1:81200180-81200199 | None:intergenic | 40.0% | |
| CAATCCGCACTGAAAACTAA+AGG | + | chr4_1:81200186-81200205 | None:intergenic | 40.0% | |
| !!! | CTTTAGTTTTCAGTGCGGAT+TGG | - | chr4_1:81200184-81200203 | Msa0577020:intron | 40.0% |
| AACAACCTAGATAGACTCCT+TGG | + | chr4_1:81200707-81200726 | None:intergenic | 40.0% | |
| ! | TGGGATTCCTTATGGATTGA+AGG | - | chr4_1:81200983-81201002 | Msa0577020:intron | 40.0% |
| !!! | CCCCATGTTGTTTTGTATTC+TGG | + | chr4_1:81201023-81201042 | None:intergenic | 40.0% |
| CAGAGTTCAGAATTGAACCT+GGG | + | chr4_1:81198948-81198967 | None:intergenic | 40.0% | |
| TCAGAGTTCAGAATTGAACC+TGG | + | chr4_1:81198949-81198968 | None:intergenic | 40.0% | |
| AACTCTGAACTTAACGAGAG+CGG | - | chr4_1:81198961-81198980 | Msa0577020:intron | 40.0% | |
| GGTTCAGAAACTGCATTTAC+AGG | + | chr4_1:81199020-81199039 | None:intergenic | 40.0% | |
| !!! | CATGATCGGTTGGTTTTTGT+TGG | + | chr4_1:81199156-81199175 | None:intergenic | 40.0% |
| CAACAAAAACCAACCGATCA+TGG | - | chr4_1:81199154-81199173 | Msa0577020:CDS | 40.0% | |
| GTAGAATTACCATGATCGGT+TGG | + | chr4_1:81199166-81199185 | None:intergenic | 40.0% | |
| TGGACAGTAAGAAACAGAGT+TGG | + | chr4_1:81199214-81199233 | None:intergenic | 40.0% | |
| ACCTGTTGTACATTTGTCAG+GGG | + | chr4_1:81199300-81199319 | None:intergenic | 40.0% | |
| AATATTCTGCCGCAAATTGC+AGG | - | chr4_1:81199344-81199363 | Msa0577020:intron | 40.0% | |
| TGACTGTTGCTCTTGAACTT+GGG | + | chr4_1:81199589-81199608 | None:intergenic | 40.0% | |
| GTTGGCATCAAGTAAACCTA+AGG | + | chr4_1:81199972-81199991 | None:intergenic | 40.0% | |
| ACTTGATGCCAACTTCTTCA+AGG | - | chr4_1:81199979-81199998 | Msa0577020:intron | 40.0% | |
| CTGATCATCCTTGAAGAAGT+TGG | + | chr4_1:81199990-81200009 | None:intergenic | 40.0% | |
| CAACTTCTTCAAGGATGATC+AGG | - | chr4_1:81199988-81200007 | Msa0577020:intron | 40.0% | |
| ! | GAGTTGTTACAGTTGATGCT+TGG | - | chr4_1:81200033-81200052 | Msa0577020:intron | 40.0% |
| ! | TTGTTACAGTTGATGCTTGG+TGG | - | chr4_1:81200036-81200055 | Msa0577020:intron | 40.0% |
| AGCAATCTCGTCAATCTAAG+AGG | + | chr4_1:81200076-81200095 | None:intergenic | 40.0% | |
| ! | CTTGTAGCTTCTAAGAATGG+AGG | - | chr4_1:81200144-81200163 | Msa0577020:intron | 40.0% |
| GCACTGAAAACTAAAGGTGA+TGG | + | chr4_1:81200180-81200199 | None:intergenic | 40.0% | |
| CAATCCGCACTGAAAACTAA+AGG | + | chr4_1:81200186-81200205 | None:intergenic | 40.0% | |
| !!! | CTTTAGTTTTCAGTGCGGAT+TGG | - | chr4_1:81200184-81200203 | Msa0577020:intron | 40.0% |
| AACAACCTAGATAGACTCCT+TGG | + | chr4_1:81200707-81200726 | None:intergenic | 40.0% | |
| ! | TGGGATTCCTTATGGATTGA+AGG | - | chr4_1:81200983-81201002 | Msa0577020:intron | 40.0% |
| !!! | CCCCATGTTGTTTTGTATTC+TGG | + | chr4_1:81201023-81201042 | None:intergenic | 40.0% |
| TCAGAATTGAACCTGGGTCT+GGG | + | chr4_1:81198942-81198961 | None:intergenic | 45.0% | |
| TTCAGAATTGAACCTGGGTC+TGG | + | chr4_1:81198943-81198962 | None:intergenic | 45.0% | |
| ATATGCGAGAAGGGGAACAA+CGG | + | chr4_1:81199111-81199130 | None:intergenic | 45.0% | |
| TGAGGAAGGATATGCGAGAA+GGG | + | chr4_1:81199120-81199139 | None:intergenic | 45.0% | |
| GAAGAACAAAGTGGTGAGGA+AGG | + | chr4_1:81199134-81199153 | None:intergenic | 45.0% | |
| GTTGGAAGAACAAAGTGGTG+AGG | + | chr4_1:81199138-81199157 | None:intergenic | 45.0% | |
| TTGTACATTTGTCAGGGGTG+TGG | + | chr4_1:81199295-81199314 | None:intergenic | 45.0% | |
| ACCCCTGACAAATGTACAAC+AGG | - | chr4_1:81199296-81199315 | Msa0577020:intron | 45.0% | |
| GAGGAAAGGACAATAGCCTT+TGG | + | chr4_1:81199430-81199449 | None:intergenic | 45.0% | |
| GACTGTTGCTCTTGAACTTG+GGG | + | chr4_1:81199588-81199607 | None:intergenic | 45.0% | |
| CTGACTGTTGCTCTTGAACT+TGG | + | chr4_1:81199590-81199609 | None:intergenic | 45.0% | |
| CCTAAGGAACATCTTAGGCA+GGG | + | chr4_1:81199956-81199975 | None:intergenic | 45.0% | |
| ACCTAAGGAACATCTTAGGC+AGG | + | chr4_1:81199957-81199976 | None:intergenic | 45.0% | |
| CTCCGTATCTCCGAAATAGA+AGG | + | chr4_1:81200252-81200271 | None:intergenic | 45.0% | |
| GTTCACCTAACTCAAGAACC+TGG | + | chr4_1:81200425-81200444 | None:intergenic | 45.0% | |
| GCTGATGAATTGCTTAGCCA+AGG | - | chr4_1:81200687-81200706 | Msa0577020:CDS | 45.0% | |
| CTTAGCCAAGGAGTCTATCT+AGG | - | chr4_1:81200699-81200718 | Msa0577020:CDS | 45.0% | |
| CAAAAGGATGCAGAAGGTTG+CGG | + | chr4_1:81200884-81200903 | None:intergenic | 45.0% | |
| ! | GCAACCTTCTGCATCCTTTT+GGG | - | chr4_1:81200883-81200902 | Msa0577020:five_prime_UTR | 45.0% |
| ACATCCCAAAAGGATGCAGA+AGG | + | chr4_1:81200890-81200909 | None:intergenic | 45.0% | |
| TTCATTGAAGGGCCTCTTCA+TGG | - | chr4_1:81200963-81200982 | Msa0577020:intron | 45.0% | |
| TCATTGAAGGGCCTCTTCAT+GGG | - | chr4_1:81200964-81200983 | Msa0577020:intron | 45.0% | |
| CCATAAGGAATCCCATGAAG+AGG | + | chr4_1:81200978-81200997 | None:intergenic | 45.0% | |
| CCTCTTCATGGGATTCCTTA+TGG | - | chr4_1:81200975-81200994 | Msa0577020:intron | 45.0% | |
| TCAGAATTGAACCTGGGTCT+GGG | + | chr4_1:81198942-81198961 | None:intergenic | 45.0% | |
| TTCAGAATTGAACCTGGGTC+TGG | + | chr4_1:81198943-81198962 | None:intergenic | 45.0% | |
| ATATGCGAGAAGGGGAACAA+CGG | + | chr4_1:81199111-81199130 | None:intergenic | 45.0% | |
| TGAGGAAGGATATGCGAGAA+GGG | + | chr4_1:81199120-81199139 | None:intergenic | 45.0% | |
| GAAGAACAAAGTGGTGAGGA+AGG | + | chr4_1:81199134-81199153 | None:intergenic | 45.0% | |
| GTTGGAAGAACAAAGTGGTG+AGG | + | chr4_1:81199138-81199157 | None:intergenic | 45.0% | |
| TTGTACATTTGTCAGGGGTG+TGG | + | chr4_1:81199295-81199314 | None:intergenic | 45.0% | |
| ACCCCTGACAAATGTACAAC+AGG | - | chr4_1:81199296-81199315 | Msa0577020:intron | 45.0% | |
| GAGGAAAGGACAATAGCCTT+TGG | + | chr4_1:81199430-81199449 | None:intergenic | 45.0% | |
| GACTGTTGCTCTTGAACTTG+GGG | + | chr4_1:81199588-81199607 | None:intergenic | 45.0% | |
| CTGACTGTTGCTCTTGAACT+TGG | + | chr4_1:81199590-81199609 | None:intergenic | 45.0% | |
| CCTAAGGAACATCTTAGGCA+GGG | + | chr4_1:81199956-81199975 | None:intergenic | 45.0% | |
| ACCTAAGGAACATCTTAGGC+AGG | + | chr4_1:81199957-81199976 | None:intergenic | 45.0% | |
| CTCCGTATCTCCGAAATAGA+AGG | + | chr4_1:81200252-81200271 | None:intergenic | 45.0% | |
| GTTCACCTAACTCAAGAACC+TGG | + | chr4_1:81200425-81200444 | None:intergenic | 45.0% | |
| GCTGATGAATTGCTTAGCCA+AGG | - | chr4_1:81200687-81200706 | Msa0577020:CDS | 45.0% | |
| CTTAGCCAAGGAGTCTATCT+AGG | - | chr4_1:81200699-81200718 | Msa0577020:CDS | 45.0% | |
| CAAAAGGATGCAGAAGGTTG+CGG | + | chr4_1:81200884-81200903 | None:intergenic | 45.0% | |
| ! | GCAACCTTCTGCATCCTTTT+GGG | - | chr4_1:81200883-81200902 | Msa0577020:five_prime_UTR | 45.0% |
| ACATCCCAAAAGGATGCAGA+AGG | + | chr4_1:81200890-81200909 | None:intergenic | 45.0% | |
| TTCATTGAAGGGCCTCTTCA+TGG | - | chr4_1:81200963-81200982 | Msa0577020:intron | 45.0% | |
| TCATTGAAGGGCCTCTTCAT+GGG | - | chr4_1:81200964-81200983 | Msa0577020:intron | 45.0% | |
| CCATAAGGAATCCCATGAAG+AGG | + | chr4_1:81200978-81200997 | None:intergenic | 45.0% | |
| CCTCTTCATGGGATTCCTTA+TGG | - | chr4_1:81200975-81200994 | Msa0577020:intron | 45.0% | |
| !!! | TTTAGTTTTAAAATAAATTT+TGG | - | chr4_1:81200938-81200957 | Msa0577020:intron | 5.0% |
| !!! | TTTAGTTTTAAAATAAATTT+TGG | - | chr4_1:81200938-81200957 | Msa0577020:intron | 5.0% |
| AAGAAAGAACTCCCAGACCC+AGG | - | chr4_1:81198928-81198947 | Msa0577020:intron | 50.0% | |
| GAGGAAGGATATGCGAGAAG+GGG | + | chr4_1:81199119-81199138 | None:intergenic | 50.0% | |
| GTGAGGAAGGATATGCGAGA+AGG | + | chr4_1:81199121-81199140 | None:intergenic | 50.0% | |
| CCCTGCCTAAGATGTTCCTT+AGG | - | chr4_1:81199953-81199972 | Msa0577020:intron | 50.0% | |
| !! | CTTTTGGTTGCGCAGTGAAC+TGG | + | chr4_1:81200219-81200238 | None:intergenic | 50.0% |
| CAGTTCACTGCGCAACCAAA+AGG | - | chr4_1:81200217-81200236 | Msa0577020:intron | 50.0% | |
| ! | CGCAACCTTCTGCATCCTTT+TGG | - | chr4_1:81200882-81200901 | Msa0577020:five_prime_UTR | 50.0% |
| AAGAAAGAACTCCCAGACCC+AGG | - | chr4_1:81198928-81198947 | Msa0577020:intron | 50.0% | |
| GAGGAAGGATATGCGAGAAG+GGG | + | chr4_1:81199119-81199138 | None:intergenic | 50.0% | |
| GTGAGGAAGGATATGCGAGA+AGG | + | chr4_1:81199121-81199140 | None:intergenic | 50.0% | |
| CCCTGCCTAAGATGTTCCTT+AGG | - | chr4_1:81199953-81199972 | Msa0577020:intron | 50.0% | |
| !! | CTTTTGGTTGCGCAGTGAAC+TGG | + | chr4_1:81200219-81200238 | None:intergenic | 50.0% |
| CAGTTCACTGCGCAACCAAA+AGG | - | chr4_1:81200217-81200236 | Msa0577020:intron | 50.0% | |
| ! | CGCAACCTTCTGCATCCTTT+TGG | - | chr4_1:81200882-81200901 | Msa0577020:five_prime_UTR | 50.0% |
| GCAGTTTCTGAACCGACACG+TGG | - | chr4_1:81199026-81199045 | Msa0577020:intron | 55.0% | |
| TATCTCCTGGAGTGAACGCC+AGG | - | chr4_1:81200598-81200617 | Msa0577020:intron | 55.0% | |
| TTGTACCTGGCGTTCACTCC+AGG | + | chr4_1:81200606-81200625 | None:intergenic | 55.0% | |
| GCAGTTTCTGAACCGACACG+TGG | - | chr4_1:81199026-81199045 | Msa0577020:intron | 55.0% | |
| TATCTCCTGGAGTGAACGCC+AGG | - | chr4_1:81200598-81200617 | Msa0577020:intron | 55.0% | |
| TTGTACCTGGCGTTCACTCC+AGG | + | chr4_1:81200606-81200625 | None:intergenic | 55.0% | |
| TCTGAACCGACACGTGGCAG+AGG | - | chr4_1:81199032-81199051 | Msa0577020:intron | 60.0% | |
| TCTGAACCGACACGTGGCAG+AGG | - | chr4_1:81199032-81199051 | Msa0577020:intron | 60.0% | |
| GAACCGACACGTGGCAGAGG+TGG | - | chr4_1:81199035-81199054 | Msa0577020:intron | 65.0% | |
| CCACCACCTCTGCCACGTGT+CGG | + | chr4_1:81199041-81199060 | None:intergenic | 65.0% | |
| GAACCGACACGTGGCAGAGG+TGG | - | chr4_1:81199035-81199054 | Msa0577020:intron | 65.0% | |
| CCACCACCTCTGCCACGTGT+CGG | + | chr4_1:81199041-81199060 | None:intergenic | 65.0% | |
| CCGACACGTGGCAGAGGTGG+TGG | - | chr4_1:81199038-81199057 | Msa0577020:intron | 70.0% | |
| CCGACACGTGGCAGAGGTGG+TGG | - | chr4_1:81199038-81199057 | Msa0577020:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 81198756 | 81201106 | 81198756 | ID=Msa0577020;Name=Msa0577020 |
| chr4_1 | mRNA | 81198756 | 81201106 | 81198756 | ID=Msa0577020-mRNA-1;Parent=Msa0577020;Name=Msa0577020-mRNA-1;_AED=0.11;_eAED=0.11;_QI=124|0.66|0.42|1|0.83|0.57|7|0|275 |
| chr4_1 | exon | 81198756 | 81198889 | 81198756 | ID=Msa0577020-mRNA-1:exon:29254;Parent=Msa0577020-mRNA-1 |
| chr4_1 | exon | 81199142 | 81199242 | 81199142 | ID=Msa0577020-mRNA-1:exon:29253;Parent=Msa0577020-mRNA-1 |
| chr4_1 | exon | 81199354 | 81199436 | 81199354 | ID=Msa0577020-mRNA-1:exon:29252;Parent=Msa0577020-mRNA-1 |
| chr4_1 | exon | 81199557 | 81199781 | 81199557 | ID=Msa0577020-mRNA-1:exon:29251;Parent=Msa0577020-mRNA-1 |
| chr4_1 | exon | 81199853 | 81199954 | 81199853 | ID=Msa0577020-mRNA-1:exon:29250;Parent=Msa0577020-mRNA-1 |
| chr4_1 | exon | 81200687 | 81200936 | 81200687 | ID=Msa0577020-mRNA-1:exon:29249;Parent=Msa0577020-mRNA-1 |
| chr4_1 | exon | 81201053 | 81201106 | 81201053 | ID=Msa0577020-mRNA-1:exon:29248;Parent=Msa0577020-mRNA-1 |
| chr4_1 | five_prime_UTR | 81201053 | 81201106 | 81201053 | ID=Msa0577020-mRNA-1:five_prime_utr;Parent=Msa0577020-mRNA-1 |
| chr4_1 | five_prime_UTR | 81200867 | 81200936 | 81200867 | ID=Msa0577020-mRNA-1:five_prime_utr;Parent=Msa0577020-mRNA-1 |
| chr4_1 | CDS | 81200687 | 81200866 | 81200687 | ID=Msa0577020-mRNA-1:cds;Parent=Msa0577020-mRNA-1 |
| chr4_1 | CDS | 81199853 | 81199954 | 81199853 | ID=Msa0577020-mRNA-1:cds;Parent=Msa0577020-mRNA-1 |
| chr4_1 | CDS | 81199557 | 81199781 | 81199557 | ID=Msa0577020-mRNA-1:cds;Parent=Msa0577020-mRNA-1 |
| chr4_1 | CDS | 81199354 | 81199436 | 81199354 | ID=Msa0577020-mRNA-1:cds;Parent=Msa0577020-mRNA-1 |
| chr4_1 | CDS | 81199142 | 81199242 | 81199142 | ID=Msa0577020-mRNA-1:cds;Parent=Msa0577020-mRNA-1 |
| chr4_1 | CDS | 81198756 | 81198889 | 81198756 | ID=Msa0577020-mRNA-1:cds;Parent=Msa0577020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
