Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577150 | XP_039685256.1 | 98.256 | 344 | 6 | 0 | 1 | 344 | 1 | 344 | 0.0 | 696 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577150 | sp|A2RVJ8|HIT4_ARATH | 66.181 | 343 | 105 | 2 | 2 | 344 | 101 | 432 | 1.35e-164 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577150 | A0A396GRK1 | 98.256 | 344 | 6 | 0 | 1 | 344 | 1 | 344 | 0.0 | 696 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0577150 | Msa0577160 | 0.924575 | 5.863793e-90 | -8.615850e-47 |
| Msa0577150 | Msa0704770 | 0.923096 | 4.161789e-89 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577150 | MtrunA17_Chr8g0382951 | 98.256 | 344 | 6 | 0 | 1 | 344 | 1 | 344 | 0.0 | 696 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0577150 | AT5G10010.1 | 66.181 | 343 | 105 | 2 | 2 | 344 | 101 | 432 | 1.38e-165 | 471 |
| Msa0577150 | AT5G64910.4 | 60.923 | 325 | 123 | 4 | 23 | 344 | 149 | 472 | 1.66e-124 | 367 |
| Msa0577150 | AT5G64910.3 | 60.923 | 325 | 123 | 4 | 23 | 344 | 149 | 472 | 1.66e-124 | 367 |
| Msa0577150 | AT5G64910.5 | 60.923 | 325 | 123 | 4 | 23 | 344 | 149 | 472 | 1.66e-124 | 367 |
| Msa0577150 | AT5G64910.1 | 59.677 | 310 | 122 | 3 | 23 | 330 | 149 | 457 | 1.35e-114 | 342 |
| Msa0577150 | AT5G64910.2 | 59.355 | 310 | 120 | 4 | 23 | 330 | 149 | 454 | 5.60e-112 | 336 |
Find 108 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCACCATCTGATAAAAT+TGG | 0.157161 | 4_1:-81337151 | Msa0577150:CDS |
| GGCTCAACTGGATATATTAT+TGG | 0.161747 | 4_1:+81332554 | None:intergenic |
| TCAAATTCATCTTCCTTAAA+TGG | 0.186723 | 4_1:+81332593 | None:intergenic |
| TCAAATTCATCTTCCTTAAA+TGG | 0.186723 | 4_1:+81335783 | None:intergenic |
| CTTCGAAGATAAGCGTAATT+TGG | 0.193911 | 4_1:-81338492 | Msa0577150:intron |
| CGCTTATCTTCGAAGTATTC+AGG | 0.208544 | 4_1:+81338500 | None:intergenic |
| GGAAAGAAGGTTTACCTATT+TGG | 0.212336 | 4_1:-81337807 | Msa0577150:CDS |
| TCCTATGAAGCAAATGAAAA+TGG | 0.241093 | 4_1:-81337092 | Msa0577150:CDS |
| GACACGCTCTTACATTTAAA+AGG | 0.263703 | 4_1:+81338786 | None:intergenic |
| AGATTTCTATCAGCCATTTA+AGG | 0.268276 | 4_1:-81335796 | Msa0577150:CDS |
| CTTACTGGCTTTGGCTCAAC+TGG | 0.294060 | 4_1:+81332542 | None:intergenic |
| TCTTTAATCTATCCAACTTC+AGG | 0.314948 | 4_1:+81335968 | None:intergenic |
| TAAATCATAATTACCGGCTT+TGG | 0.319009 | 4_1:+81335723 | None:intergenic |
| GGCTCAACTGGATATATTAT+CGG | 0.334796 | 4_1:+81335744 | None:intergenic |
| ACTTGTCAGGGAAGTGGTTT+GGG | 0.334902 | 4_1:-81332029 | Msa0577150:CDS |
| GAAGTATTCAGGTTCGGATT+GGG | 0.348830 | 4_1:+81338511 | None:intergenic |
| TAAATGATACTTACTGGCTT+TGG | 0.353260 | 4_1:+81332533 | None:intergenic |
| TGCAGTCTCCATTCATAAAC+AGG | 0.360207 | 4_1:-81334445 | Msa0577150:intron |
| AACTTGTCAGGGAAGTGGTT+TGG | 0.362570 | 4_1:-81332030 | Msa0577150:CDS |
| AATATCTTTACTTACCTTGA+AGG | 0.363364 | 4_1:+81335105 | None:intergenic |
| GAAGCAACAGGTTGGGAATC+AGG | 0.366089 | 4_1:+81338596 | None:intergenic |
| ATTACCGGCTTTGGCTCAAC+TGG | 0.372230 | 4_1:+81335732 | None:intergenic |
| CACCAAAAGTACCTCTCTAT+TGG | 0.385186 | 4_1:+81334967 | None:intergenic |
| GTTGTCGTTTGCAGCTCAAC+TGG | 0.393426 | 4_1:-81337663 | Msa0577150:intron |
| TTCCACCATCTGATAAAATT+GGG | 0.396244 | 4_1:-81337150 | Msa0577150:CDS |
| ATGGTGTTTGCGTTCGAATT+CGG | 0.399450 | 4_1:+81338671 | None:intergenic |
| CCGTAATACCTGTTTATGAA+TGG | 0.401773 | 4_1:+81334437 | None:intergenic |
| TACGCTCGGTGCAACCAAAT+AGG | 0.402505 | 4_1:+81337793 | None:intergenic |
| CGAAGTATTCAGGTTCGGAT+TGG | 0.407077 | 4_1:+81338510 | None:intergenic |
| ATTTGTCAGGGAAAAGGTTC+GGG | 0.419026 | 4_1:-81335002 | Msa0577150:CDS |
| CAACAAACCTCAGTGCCAAC+AGG | 0.419531 | 4_1:+81338113 | None:intergenic |
| TCTTCTTATCGATTTGAATC+CGG | 0.420096 | 4_1:-81338763 | Msa0577150:five_prime_UTR |
| GTAATATCAGTGGGACCAAT+TGG | 0.421390 | 4_1:-81338015 | Msa0577150:intron |
| TCTTTCTTTAGGAACTTGTC+AGG | 0.421962 | 4_1:-81332042 | Msa0577150:intron |
| AGGTTCGGATTGGGGTTTAG+AGG | 0.423673 | 4_1:+81338520 | None:intergenic |
| ATCTTCGAAGTATTCAGGTT+CGG | 0.427533 | 4_1:+81338505 | None:intergenic |
| TTGGGAATCTTCGGTGTGCT+TGG | 0.428739 | 4_1:+81338619 | None:intergenic |
| ACCTGATGTGTCAGGTGTTA+AGG | 0.432564 | 4_1:-81334767 | Msa0577150:intron |
| GGAATCAGGTTGGGAATCTT+CGG | 0.433336 | 4_1:+81338610 | None:intergenic |
| GAAGAGGGTGGCCTCTTGTA+TGG | 0.433536 | 4_1:-81337828 | Msa0577150:CDS |
| TCTTTCTTTAGGAATTTGTC+AGG | 0.440455 | 4_1:-81335015 | Msa0577150:intron |
| AGGTCTTCTGTGAATTTGAT+TGG | 0.443236 | 4_1:-81335591 | Msa0577150:CDS |
| GAGGCGTTTAGCTTTAGGTT+TGG | 0.448003 | 4_1:+81338547 | None:intergenic |
| AATTTGTCAGGGAAAAGGTT+CGG | 0.448510 | 4_1:-81335003 | Msa0577150:CDS |
| TTAGGAATTTGTCAGGGAAA+AGG | 0.455764 | 4_1:-81335008 | Msa0577150:intron |
| AGCACCTTTCCTCATTGTGA+TGG | 0.464290 | 4_1:+81338652 | None:intergenic |
| TTTGATACACAGCATCCAAT+TGG | 0.469259 | 4_1:+81338000 | None:intergenic |
| TGCTTTGAAACACCTGAAGT+TGG | 0.469556 | 4_1:-81335980 | Msa0577150:CDS |
| GAGCTTACCGCTACAACAAC+AGG | 0.470450 | 4_1:+81337605 | None:intergenic |
| TTGAGACGAAGCAACAGGTT+GGG | 0.473888 | 4_1:+81338589 | None:intergenic |
| CTGGGTTCCGTACATTCCTC+TGG | 0.477758 | 4_1:-81337068 | Msa0577150:CDS |
| CCATTCATAAACAGGTATTA+CGG | 0.479214 | 4_1:-81334437 | Msa0577150:CDS |
| TGAATCGAAGGCGCTAGATC+CGG | 0.485544 | 4_1:+81338744 | None:intergenic |
| GTTTACTGATAAACTTATTG+AGG | 0.486345 | 4_1:-81335158 | Msa0577150:CDS |
| TGGCCTCTTGTATGGAAAGA+AGG | 0.486407 | 4_1:-81337820 | Msa0577150:CDS |
| GGTCTTCTGTGAATTTGATT+GGG | 0.487595 | 4_1:-81335590 | Msa0577150:CDS |
| AACAGGTTGGGAATCAGGTT+GGG | 0.488198 | 4_1:+81338601 | None:intergenic |
| TGAAGCAAATGAAAATGGAC+TGG | 0.492057 | 4_1:-81337087 | Msa0577150:CDS |
| GCTCAACTGGTCATGCATCA+AGG | 0.495363 | 4_1:-81337650 | Msa0577150:CDS |
| TTTACTGATAAACTTATTGA+GGG | 0.500654 | 4_1:-81335157 | Msa0577150:CDS |
| ACCTGACACATCAGGTGCAT+CGG | 0.502548 | 4_1:+81334774 | None:intergenic |
| CTCAACTGGTCATGCATCAA+GGG | 0.504378 | 4_1:-81337649 | Msa0577150:CDS |
| CCTGACACATCAGGTGCATC+GGG | 0.504797 | 4_1:+81334775 | None:intergenic |
| TTAGGAACTTGTCAGGGAAG+TGG | 0.504827 | 4_1:-81332035 | Msa0577150:intron |
| GGTGCATCGGGAGATGGAAC+GGG | 0.505043 | 4_1:+81334787 | None:intergenic |
| CAACAGGTTGGGAATCAGGT+TGG | 0.510916 | 4_1:+81338600 | None:intergenic |
| TCTTGCGTTGCACCCAAAGA+AGG | 0.511738 | 4_1:-81336866 | Msa0577150:intron |
| TATATTTATATATAAAATCA+AGG | 0.514458 | 4_1:+81338809 | None:intergenic |
| ACCTTAACACCTGACACATC+AGG | 0.515689 | 4_1:+81334766 | None:intergenic |
| TTCCGCACTCATTTCAGCAA+TGG | 0.517076 | 4_1:+81334852 | None:intergenic |
| AAGTATTCAGGTTCGGATTG+GGG | 0.518136 | 4_1:+81338512 | None:intergenic |
| CCCGATGCACCTGATGTGTC+AGG | 0.518892 | 4_1:-81334775 | Msa0577150:CDS |
| GAGACTTCAGTCTATCAACT+TGG | 0.519749 | 4_1:+81336898 | None:intergenic |
| CTTGAGACGAAGCAACAGGT+TGG | 0.521578 | 4_1:+81338588 | None:intergenic |
| CGCTGCTCCAGAGGAATGTA+CGG | 0.522172 | 4_1:+81337061 | None:intergenic |
| ACATCAGGTGCATCGGGAGA+TGG | 0.546211 | 4_1:+81334781 | None:intergenic |
| AGGTGCATCGGGAGATGGAA+CGG | 0.548169 | 4_1:+81334786 | None:intergenic |
| TGGCTCGAAACATTCCCTGT+TGG | 0.567509 | 4_1:-81338128 | Msa0577150:CDS |
| CTTTCTTTAGGAACTTGTCA+GGG | 0.575135 | 4_1:-81332041 | Msa0577150:intron |
| GAAGCAAAGAAAGCCAATAG+AGG | 0.575705 | 4_1:-81332007 | None:intergenic |
| GATGCATACCGCTGCTCCAG+AGG | 0.579974 | 4_1:+81337052 | None:intergenic |
| TTTCAGAATGCATTCGAAGA+GGG | 0.581363 | 4_1:-81337843 | Msa0577150:intron |
| TTGGGAATTAGATGAACTTG+AGG | 0.587442 | 4_1:-81335572 | Msa0577150:intron |
| AAACCTTCTTTCCATACAAG+AGG | 0.588752 | 4_1:+81337817 | None:intergenic |
| TACTGATAAACTTATTGAGG+GGG | 0.590109 | 4_1:-81335155 | Msa0577150:CDS |
| TCTTGTAGGCAAGGGAAGCA+CGG | 0.590773 | 4_1:-81334882 | Msa0577150:intron |
| GAAGCAAATGAAAATGGACT+GGG | 0.591547 | 4_1:-81337086 | Msa0577150:CDS |
| ATATCCAGTTGAGCCAAAGC+CGG | 0.594956 | 4_1:-81335736 | Msa0577150:intron |
| CATAAACAGGTATTACGGAA+AGG | 0.597848 | 4_1:-81334432 | Msa0577150:CDS |
| AGATGAATTTGAACAAAGCA+CGG | 0.612836 | 4_1:-81335772 | Msa0577150:CDS |
| CGTACATTCCTCTGGAGCAG+CGG | 0.615658 | 4_1:-81337060 | Msa0577150:intron |
| CAGAATGCATTCGAAGAGGG+TGG | 0.615896 | 4_1:-81337840 | Msa0577150:CDS |
| CTTTCTTTAGGAATTTGTCA+GGG | 0.618977 | 4_1:-81335014 | Msa0577150:intron |
| AACATTCCCTGTTGGCACTG+AGG | 0.620526 | 4_1:-81338120 | Msa0577150:intron |
| TTACTGATAAACTTATTGAG+GGG | 0.626862 | 4_1:-81335156 | Msa0577150:CDS |
| GTATTACGGAAAGGCTCATG+AGG | 0.629234 | 4_1:-81334423 | Msa0577150:intron |
| AACACCATCACAATGAGGAA+AGG | 0.636181 | 4_1:-81338656 | Msa0577150:exon |
| AGCAAAGAAAGCCAATAGAG+AGG | 0.639340 | 4_1:-81334978 | Msa0577150:intron |
| GATTAACTCAGTTCAGAGAG+AGG | 0.642388 | 4_1:-81337128 | Msa0577150:CDS |
| CTGCATACCTGTTGTTGTAG+CGG | 0.645013 | 4_1:-81337612 | Msa0577150:intron |
| ATGCTGTGTATCAAATCAAG+TGG | 0.652338 | 4_1:-81337992 | Msa0577150:CDS |
| AACAAACCTCAGTGCCAACA+GGG | 0.653030 | 4_1:+81338114 | None:intergenic |
| TCAACTGGTCATGCATCAAG+GGG | 0.656478 | 4_1:-81337648 | Msa0577150:CDS |
| TTATATATAAAATCAAGGCG+TGG | 0.660704 | 4_1:+81338814 | None:intergenic |
| GTTTCAGAATGCATTCGAAG+AGG | 0.661105 | 4_1:-81337844 | Msa0577150:intron |
| AGCCATTGCTGAAATGAGTG+CGG | 0.676262 | 4_1:-81334854 | Msa0577150:CDS |
| ACGCAAACACCATCACAATG+AGG | 0.678492 | 4_1:-81338661 | Msa0577150:exon |
| TGAATTTGAACAAAGCACGG+AGG | 0.770299 | 4_1:-81335769 | Msa0577150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTATTTTTTTCATTAAATT+TGG | - | chr4_1:81333345-81333364 | Msa0577150:intron | 10.0% |
| !!! | AATTGTTTTAAATTTTTTAG+TGG | - | chr4_1:81333888-81333907 | Msa0577150:intron | 10.0% |
| !!! | AAATAATAATGATAGTTTTT+GGG | + | chr4_1:81334157-81334176 | None:intergenic | 10.0% |
| !!! | AAAATAATAATGATAGTTTT+TGG | + | chr4_1:81334158-81334177 | None:intergenic | 10.0% |
| !!! | AAATTTTAAATCATAATTAC+CGG | + | chr4_1:81335162-81335181 | None:intergenic | 10.0% |
| !!! | ATACATTTAATTTAATTTGA+AGG | + | chr4_1:81336784-81336803 | None:intergenic | 10.0% |
| !! | TTAATATTATTAAGGAGAAA+CGG | - | chr4_1:81332602-81332621 | Msa0577150:intron | 15.0% |
| !! | TTTCGTTTATATCATTAATT+AGG | - | chr4_1:81332641-81332660 | Msa0577150:intron | 15.0% |
| !!! | TTTTTTTTTTGTAATATCAG+TGG | - | chr4_1:81332851-81332870 | Msa0577150:intron | 15.0% |
| !!! | TTTTTTTTTGTAATATCAGT+GGG | - | chr4_1:81332852-81332871 | Msa0577150:intron | 15.0% |
| !! | AAAAAATACTGTAATTAGTT+TGG | + | chr4_1:81333335-81333354 | None:intergenic | 15.0% |
| !! | AATGAACTAATAAACAAATT+AGG | + | chr4_1:81333849-81333868 | None:intergenic | 15.0% |
| !!! | AATTTAAAACAATTTACCAA+AGG | + | chr4_1:81333882-81333901 | None:intergenic | 15.0% |
| !! | AACAACAAAAACTAAATAAA+CGG | + | chr4_1:81334769-81334788 | None:intergenic | 15.0% |
| !!! | CATTTTTTTTTTTGTTTGTT+TGG | - | chr4_1:81336897-81336916 | Msa0577150:CDS | 15.0% |
| !!! | ATTCGTGTTAATTTTGAATT+TGG | - | chr4_1:81332484-81332503 | Msa0577150:intron | 20.0% |
| !! | TTGAAGACATAAATTAAATG+AGG | + | chr4_1:81333949-81333968 | None:intergenic | 20.0% |
| !! | TTAAATTATTAAACATGCGT+TGG | - | chr4_1:81334101-81334120 | Msa0577150:intron | 20.0% |
| !! | TCACATATTATAACAAAGTT+AGG | + | chr4_1:81334868-81334887 | None:intergenic | 20.0% |
| !!! | TTTGTTATAATATGTGATAC+AGG | - | chr4_1:81334871-81334890 | Msa0577150:CDS | 20.0% |
| !!! | ATATGTTCAAATTTTGTATG+AGG | - | chr4_1:81334986-81335005 | Msa0577150:CDS | 20.0% |
| !! | CTAGGAAATATTTAATTATC+TGG | - | chr4_1:81335531-81335550 | Msa0577150:intron | 20.0% |
| !! | AATATTTAATTATCTGGTGT+AGG | - | chr4_1:81335537-81335556 | Msa0577150:intron | 20.0% |
| !! | CCATTATTAGTATATTTATC+TGG | + | chr4_1:81335657-81335676 | None:intergenic | 20.0% |
| !! | CCAGATAAATATACTAATAA+TGG | - | chr4_1:81335654-81335673 | Msa0577150:intron | 20.0% |
| !! | AATATACTAATAATGGTCAA+AGG | - | chr4_1:81335661-81335680 | Msa0577150:intron | 20.0% |
| !! | TTTACTGATAAACTTATTGA+GGG | - | chr4_1:81335719-81335738 | Msa0577150:intron | 20.0% |
| !! | AATAAACTCAATATCATCAT+CGG | + | chr4_1:81336325-81336344 | None:intergenic | 20.0% |
| !! | ATATATTATCAGTAAACTGT+AGG | + | chr4_1:81336400-81336419 | None:intergenic | 20.0% |
| !! | AACTTCATATAGAACAAATA+CGG | + | chr4_1:81336530-81336549 | None:intergenic | 20.0% |
| !! | GGAAAAAATAATACTTTCAT+AGG | + | chr4_1:81336763-81336782 | None:intergenic | 20.0% |
| !! | ATTATACAGTTCAACTTTAA+TGG | - | chr4_1:81337197-81337216 | Msa0577150:intron | 20.0% |
| !! | TTATACAGTTCAACTTTAAT+GGG | - | chr4_1:81337198-81337217 | Msa0577150:intron | 20.0% |
| !!! | CATTTTGTTTAGTTTATAGA+AGG | + | chr4_1:81337264-81337283 | None:intergenic | 20.0% |
| !! | CTTCTATAAACTAAACAAAA+TGG | - | chr4_1:81337262-81337281 | Msa0577150:intron | 20.0% |
| !!! | TTATTTGATTCGTCAATTAT+AGG | - | chr4_1:81338163-81338182 | Msa0577150:intron | 20.0% |
| !!! | TATTTGATTCGTCAATTATA+GGG | - | chr4_1:81338164-81338183 | Msa0577150:intron | 20.0% |
| !! | AATTTCTAAATGATACTTAC+TGG | + | chr4_1:81338352-81338371 | None:intergenic | 20.0% |
| !! | TCATTTAGAAATTATCCAAT+AGG | - | chr4_1:81338359-81338378 | Msa0577150:intron | 20.0% |
| !! | TACGAAAAAATTCAGAAAAA+TGG | + | chr4_1:81338660-81338679 | None:intergenic | 20.0% |
| !! | ACAATGATTGTAAAAATAAC+AGG | + | chr4_1:81335470-81335489 | None:intergenic | 20.0% |
| !!! | TGTTATTTTTACAATCATTG+TGG | - | chr4_1:81335469-81335488 | Msa0577150:intron | 20.0% |
| !! | GGATATAACGCTTAATTTTT+GGG | + | chr4_1:81332044-81332063 | None:intergenic | 25.0% |
| !! | TGGATATAACGCTTAATTTT+TGG | + | chr4_1:81332045-81332064 | None:intergenic | 25.0% |
| ! | TTATATATAAAATCAAGGCG+TGG | + | chr4_1:81332065-81332084 | None:intergenic | 25.0% |
| ! | TAAGATAAATATGACCAGAT+CGG | + | chr4_1:81333174-81333193 | None:intergenic | 25.0% |
| !!! | ACCAAAACTATTTTTCCTTT+GGG | + | chr4_1:81333452-81333471 | None:intergenic | 25.0% |
| !!! | AACCAAAACTATTTTTCCTT+TGG | + | chr4_1:81333453-81333472 | None:intergenic | 25.0% |
| ! | ATCTTAACAACTAAGCATTT+AGG | + | chr4_1:81333575-81333594 | None:intergenic | 25.0% |
| !! | AGATATCAGTTTTACTTACT+TGG | - | chr4_1:81333604-81333623 | Msa0577150:intron | 25.0% |
| !! | TTAATCCCAATTTTATCAGA+TGG | + | chr4_1:81333734-81333753 | None:intergenic | 25.0% |
| !!! | AAATTTTTTAGTGGTTCCTT+TGG | - | chr4_1:81333897-81333916 | Msa0577150:intron | 25.0% |
| ! | ATTACTAAGGAATTTACCAA+AGG | + | chr4_1:81333916-81333935 | None:intergenic | 25.0% |
| ! | GTAAAAAACATACCTTCTTT+GGG | + | chr4_1:81334025-81334044 | None:intergenic | 25.0% |
| ! | AGTAAAAAACATACCTTCTT+TGG | + | chr4_1:81334026-81334045 | None:intergenic | 25.0% |
| ! | ACTAACATTATTGACAGTAA+AGG | + | chr4_1:81334049-81334068 | None:intergenic | 25.0% |
| ! | ATGCATAATAATACATGTGT+TGG | - | chr4_1:81334239-81334258 | Msa0577150:intron | 25.0% |
| ! | TGCATAATAATACATGTGTT+GGG | - | chr4_1:81334240-81334259 | Msa0577150:intron | 25.0% |
| !! | TCATTTTAAATAAATGAGCG+TGG | - | chr4_1:81334593-81334612 | Msa0577150:intron | 25.0% |
| !! | CTATATACTTTTACAATTGC+TGG | + | chr4_1:81334703-81334722 | None:intergenic | 25.0% |
| ! | AAAGTATATAGCCACTTATT+TGG | - | chr4_1:81334712-81334731 | Msa0577150:intron | 25.0% |
| ! | TCAAATTCATCTTCCTTAAA+TGG | + | chr4_1:81335096-81335115 | None:intergenic | 25.0% |
| !!! | GGATATTTTTTCTTACAGTA+CGG | - | chr4_1:81335215-81335234 | Msa0577150:intron | 25.0% |
| !!! | GATATTTTTTCTTACAGTAC+GGG | - | chr4_1:81335216-81335235 | Msa0577150:intron | 25.0% |
| ! | GTGACAAAGAAAACAAAATA+TGG | + | chr4_1:81335247-81335266 | None:intergenic | 25.0% |
| ! | TTTCTAAACTGTAACATATC+AGG | + | chr4_1:81335363-81335382 | None:intergenic | 25.0% |
| ! | AGAAAAATGGCTATTATAAG+CGG | + | chr4_1:81335407-81335426 | None:intergenic | 25.0% |
| ! | TACTAGAGATTGTTAAAGTT+AGG | - | chr4_1:81335626-81335645 | Msa0577150:intron | 25.0% |
| ! | ACTAGAGATTGTTAAAGTTA+GGG | - | chr4_1:81335627-81335646 | Msa0577150:intron | 25.0% |
| ! | GTTTACTGATAAACTTATTG+AGG | - | chr4_1:81335718-81335737 | Msa0577150:intron | 25.0% |
| ! | TTACTGATAAACTTATTGAG+GGG | - | chr4_1:81335720-81335739 | Msa0577150:intron | 25.0% |
| ! | AATATCTTTACTTACCTTGA+AGG | + | chr4_1:81335774-81335793 | None:intergenic | 25.0% |
| ! | AGAGATGATTGTAAATAGTT+AGG | - | chr4_1:81336193-81336212 | Msa0577150:intron | 25.0% |
| !!! | AACTTTAAGACATAAGTTGA+GGG | + | chr4_1:81336268-81336287 | None:intergenic | 25.0% |
| !!! | AAACTTTAAGACATAAGTTG+AGG | + | chr4_1:81336269-81336288 | None:intergenic | 25.0% |
| ! | TTATGTCTTAAAGTTTGAGA+TGG | - | chr4_1:81336273-81336292 | Msa0577150:intron | 25.0% |
| ! | ACATAATCAACAGAAATTCA+GGG | + | chr4_1:81336357-81336376 | None:intergenic | 25.0% |
| ! | AACATAATCAACAGAAATTC+AGG | + | chr4_1:81336358-81336377 | None:intergenic | 25.0% |
| ! | ACTTCATATAGAACAAATAC+GGG | + | chr4_1:81336529-81336548 | None:intergenic | 25.0% |
| ! | CATAGGTAAAGAAAATTTGA+TGG | + | chr4_1:81336575-81336594 | None:intergenic | 25.0% |
| ! | TACCTATGTAATTGTCTAAA+AGG | - | chr4_1:81336587-81336606 | Msa0577150:intron | 25.0% |
| ! | ACCTATGTAATTGTCTAAAA+GGG | - | chr4_1:81336588-81336607 | Msa0577150:intron | 25.0% |
| !! | CTCAGAAATTCTCTAAAAAA+TGG | + | chr4_1:81336695-81336714 | None:intergenic | 25.0% |
| !!! | TTGAATTCTCTTTGTTTTGA+TGG | + | chr4_1:81337435-81337454 | None:intergenic | 25.0% |
| ! | AACAAAAGAACCTAAATTGT+AGG | + | chr4_1:81337531-81337550 | None:intergenic | 25.0% |
| ! | ATTGGTTGATTGTACATATA+TGG | - | chr4_1:81337651-81337670 | Msa0577150:CDS | 25.0% |
| ! | TTGGTTGATTGTACATATAT+GGG | - | chr4_1:81337652-81337671 | Msa0577150:CDS | 25.0% |
| !!! | ATTTTATTAACTTGATCCAG+TGG | + | chr4_1:81338090-81338109 | None:intergenic | 25.0% |
| ! | GAATACATAGTTCAATAAAG+TGG | - | chr4_1:81338112-81338131 | Msa0577150:intron | 25.0% |
| ! | TGACGAATCAAATAATACTA+TGG | + | chr4_1:81338158-81338177 | None:intergenic | 25.0% |
| ! | TCAAATTCATCTTCCTTAAA+TGG | + | chr4_1:81335096-81335115 | None:intergenic | 25.0% |
| !!! | TTGACATTCTTTGAGTTTTT+TGG | - | chr4_1:81338383-81338402 | Msa0577150:intron | 25.0% |
| !!! | TGACATTCTTTGAGTTTTTT+GGG | - | chr4_1:81338384-81338403 | Msa0577150:intron | 25.0% |
| !!! | ATTTTTTCGTATTATTCTGC+AGG | - | chr4_1:81338669-81338688 | Msa0577150:five_prime_UTR | 25.0% |
| ! | TTACTTATCTTATGTCTAAC+AGG | + | chr4_1:81338759-81338778 | None:intergenic | 25.0% |
| ! | CATAAGATAAGTAACAAGTT+AGG | - | chr4_1:81338765-81338784 | Msa0577150:five_prime_UTR | 25.0% |
| ! | GAAAGAAAGAAAGAAAGAAA+GGG | + | chr4_1:81338796-81338815 | None:intergenic | 25.0% |
| ! | AGAAAGAAAGAAAGAAAGAA+AGG | + | chr4_1:81338797-81338816 | None:intergenic | 25.0% |
| ! | CTTTCTTTCTTTCTTTCTTT+AGG | - | chr4_1:81338795-81338814 | Msa0577150:five_prime_UTR | 25.0% |
| !! | TCTTCTTATCGATTTGAATC+CGG | - | chr4_1:81332113-81332132 | Msa0577150:intron | 30.0% |
| !!! | AAAAAGATAGGGTTTTGAAG+GGG | + | chr4_1:81332158-81332177 | None:intergenic | 30.0% |
| !!! | GAAAAAGATAGGGTTTTGAA+GGG | + | chr4_1:81332159-81332178 | None:intergenic | 30.0% |
| !! | AGAAAAAGATAGGGTTTTGA+AGG | + | chr4_1:81332160-81332179 | None:intergenic | 30.0% |
| GAGAGAGAAAGAAAAAGATA+GGG | + | chr4_1:81332169-81332188 | None:intergenic | 30.0% | |
| AGAGAGAGAAAGAAAAAGAT+AGG | + | chr4_1:81332170-81332189 | None:intergenic | 30.0% | |
| ACAATAGAGATATCTCAGTT+AGG | + | chr4_1:81332694-81332713 | None:intergenic | 30.0% | |
| !!! | GTTGTTGATTTCAATTTTGC+AGG | - | chr4_1:81332717-81332736 | Msa0577150:intron | 30.0% |
| TAACCTAGAAGTGAGTATTA+AGG | - | chr4_1:81332915-81332934 | Msa0577150:intron | 30.0% | |
| AAGATAAATATGACCAGATC+GGG | + | chr4_1:81333173-81333192 | None:intergenic | 30.0% | |
| TTTAAGCTTCCAATTATGCA+TGG | - | chr4_1:81333372-81333391 | Msa0577150:intron | 30.0% | |
| ATATTTGGACCATGCATAAT+TGG | + | chr4_1:81333384-81333403 | None:intergenic | 30.0% | |
| !! | AAACTATTTTTCCTTTGGGT+GGG | + | chr4_1:81333448-81333467 | None:intergenic | 30.0% |
| !! | AAAACTATTTTTCCTTTGGG+TGG | + | chr4_1:81333449-81333468 | None:intergenic | 30.0% |
| ! | ACCCAAAGGAAAAATAGTTT+TGG | - | chr4_1:81333448-81333467 | Msa0577150:intron | 30.0% |
| !!! | ATTTTATCAGATGGTGGAAA+AGG | + | chr4_1:81333725-81333744 | None:intergenic | 30.0% |
| TTTCCACCATCTGATAAAAT+TGG | - | chr4_1:81333725-81333744 | Msa0577150:intron | 30.0% | |
| TTCCACCATCTGATAAAATT+GGG | - | chr4_1:81333726-81333745 | Msa0577150:intron | 30.0% | |
| TCCTATGAAGCAAATGAAAA+TGG | - | chr4_1:81333784-81333803 | Msa0577150:intron | 30.0% | |
| ! | TCCATTTTCATTTGCTTCAT+AGG | + | chr4_1:81333788-81333807 | None:intergenic | 30.0% |
| !!! | TTCATTTTTAGCTGTTCCTT+TGG | - | chr4_1:81333863-81333882 | Msa0577150:intron | 30.0% |
| !!! | TAATGATAGTTTTTGGGTAC+AGG | + | chr4_1:81334151-81334170 | None:intergenic | 30.0% |
| TATCATCATAGCAGTATTTC+AGG | + | chr4_1:81334203-81334222 | None:intergenic | 30.0% | |
| TGAAATACTGCTATGATGAT+AGG | - | chr4_1:81334202-81334221 | Msa0577150:intron | 30.0% | |
| ACTTGACTACATATAAGTGA+TGG | + | chr4_1:81334300-81334319 | None:intergenic | 30.0% | |
| CTTTCATCTGTATATCTCTA+AGG | - | chr4_1:81334326-81334345 | Msa0577150:intron | 30.0% | |
| TGAATTGAAACCATGGTAAA+TGG | + | chr4_1:81334478-81334497 | None:intergenic | 30.0% | |
| AACTGCAAATACCAAATAAG+TGG | + | chr4_1:81334726-81334745 | None:intergenic | 30.0% | |
| !! | TTCACAAATTTGCTACATCA+AGG | + | chr4_1:81334834-81334853 | None:intergenic | 30.0% |
| TCTTTAATCTATCCAACTTC+AGG | + | chr4_1:81334911-81334930 | None:intergenic | 30.0% | |
| AGATTTCTATCAGCCATTTA+AGG | - | chr4_1:81335080-81335099 | Msa0577150:intron | 30.0% | |
| AGATGAATTTGAACAAAGCA+CGG | - | chr4_1:81335104-81335123 | Msa0577150:intron | 30.0% | |
| !! | TAAATCATAATTACCGGCTT+TGG | + | chr4_1:81335156-81335175 | None:intergenic | 30.0% |
| TAAACTGTAACATATCAGGA+AGG | + | chr4_1:81335359-81335378 | None:intergenic | 30.0% | |
| !!! | ATAGCCATTTTTCTGAATCT+TGG | - | chr4_1:81335413-81335432 | Msa0577150:intron | 30.0% |
| AACACCAAGATTCAGAAAAA+TGG | + | chr4_1:81335420-81335439 | None:intergenic | 30.0% | |
| TTAATTATCTGGTGTAGGAA+TGG | - | chr4_1:81335542-81335561 | Msa0577150:intron | 30.0% | |
| CTTTAACAATCTCTAGTAGA+AGG | + | chr4_1:81335624-81335643 | None:intergenic | 30.0% | |
| CTAGAGATTGTTAAAGTTAG+GGG | - | chr4_1:81335628-81335647 | Msa0577150:intron | 30.0% | |
| TTGTTTGTTTAATATCCTGC+AGG | - | chr4_1:81335694-81335713 | Msa0577150:intron | 30.0% | |
| TACTGATAAACTTATTGAGG+GGG | - | chr4_1:81335721-81335740 | Msa0577150:intron | 30.0% | |
| !! | TGACTTTGAAGTAACAAGTT+AGG | - | chr4_1:81335820-81335839 | Msa0577150:intron | 30.0% |
| CTCTCTTTCTTTCTTTCTTT+AGG | - | chr4_1:81335850-81335869 | Msa0577150:intron | 30.0% | |
| ! | TCTTTCTTTAGGAATTTGTC+AGG | - | chr4_1:81335861-81335880 | Msa0577150:intron | 30.0% |
| ! | CTTTCTTTAGGAATTTGTCA+GGG | - | chr4_1:81335862-81335881 | Msa0577150:intron | 30.0% |
| AAGGTTAAAAAAGCAGAAAG+CGG | + | chr4_1:81335967-81335986 | None:intergenic | 30.0% | |
| ! | TAACCTTCTTTTTCTCTTGT+AGG | - | chr4_1:81335980-81335999 | Msa0577150:CDS | 30.0% |
| TTCTTCTACCAAAAAGGAAA+AGG | + | chr4_1:81336161-81336180 | None:intergenic | 30.0% | |
| GTGAATTTCTTCTACCAAAA+AGG | + | chr4_1:81336167-81336186 | None:intergenic | 30.0% | |
| CCATTCATAAACAGGTATTA+CGG | - | chr4_1:81336439-81336458 | Msa0577150:intron | 30.0% | |
| GAAAATTGCAATTGTTGTCT+TGG | + | chr4_1:81336493-81336512 | None:intergenic | 30.0% | |
| TGTTCTATATGAAGTTTACC+CGG | - | chr4_1:81336534-81336553 | Msa0577150:intron | 30.0% | |
| ! | TCCCTTTTAGACAATTACAT+AGG | + | chr4_1:81336592-81336611 | None:intergenic | 30.0% |
| AAATCCTAGATAAGTGAAGT+AGG | - | chr4_1:81336637-81336656 | Msa0577150:intron | 30.0% | |
| !!! | ATTTTTTTGTAGCTTCCATC+AGG | + | chr4_1:81336946-81336965 | None:intergenic | 30.0% |
| ! | AGTCAATCTGTACTATGTTT+TGG | - | chr4_1:81337098-81337117 | Msa0577150:CDS | 30.0% |
| AATTAAATTTACGCATCACG+AGG | - | chr4_1:81337158-81337177 | Msa0577150:CDS | 30.0% | |
| TTGGCAATTATCAATGTCAT+GGG | - | chr4_1:81337392-81337411 | Msa0577150:intron | 30.0% | |
| ! | TATTCCAGTAGTTTGTATAC+TGG | - | chr4_1:81337467-81337486 | Msa0577150:intron | 30.0% |
| GAATGTTTGTCCTACAATTT+AGG | - | chr4_1:81337518-81337537 | Msa0577150:intron | 30.0% | |
| AAAGAATGAGAGCTCTATAT+TGG | - | chr4_1:81337633-81337652 | Msa0577150:CDS | 30.0% | |
| TTGTACATATATGGGTGAAT+CGG | - | chr4_1:81337660-81337679 | Msa0577150:intron | 30.0% | |
| TGATCCTATGTCAAACAAAA+GGG | + | chr4_1:81337689-81337708 | None:intergenic | 30.0% | |
| ATGATCCTATGTCAAACAAA+AGG | + | chr4_1:81337690-81337709 | None:intergenic | 30.0% | |
| TTCATATGACTATATCAGCT+TGG | - | chr4_1:81337714-81337733 | Msa0577150:intron | 30.0% | |
| TTACATTTATAGTCGAGTTC+TGG | - | chr4_1:81337751-81337770 | Msa0577150:intron | 30.0% | |
| TTAAATGTTACTCCAAACAG+AGG | + | chr4_1:81337834-81337853 | None:intergenic | 30.0% | |
| AAGCAATACTATCCAACTTA+AGG | + | chr4_1:81338002-81338021 | None:intergenic | 30.0% | |
| CTAAACCCAGAAAACTTATA+GGG | + | chr4_1:81338026-81338045 | None:intergenic | 30.0% | |
| TCTAAACCCAGAAAACTTAT+AGG | + | chr4_1:81338027-81338046 | None:intergenic | 30.0% | |
| GTTCAATAAAGTGGTTATGA+TGG | - | chr4_1:81338121-81338140 | Msa0577150:CDS | 30.0% | |
| ! | ATTATAGGGAATTTTGTACG+AGG | - | chr4_1:81338178-81338197 | Msa0577150:intron | 30.0% |
| AATAAAAACATTGACCGATG+AGG | + | chr4_1:81338211-81338230 | None:intergenic | 30.0% | |
| ! | AGTTTTCTATCAGCCATTTA+AGG | - | chr4_1:81338270-81338289 | Msa0577150:intron | 30.0% |
| !! | TAAATGATACTTACTGGCTT+TGG | + | chr4_1:81338346-81338365 | None:intergenic | 30.0% |
| TCAAAGAATGTCAATCCTAT+TGG | + | chr4_1:81338377-81338396 | None:intergenic | 30.0% | |
| ATTTACATAACCATGCTGTA+CGG | + | chr4_1:81338418-81338437 | None:intergenic | 30.0% | |
| CACATAGAGAAAATCAAATC+TGG | + | chr4_1:81338500-81338519 | None:intergenic | 30.0% | |
| TCTCGTAAAAACAACGCTAT+CGG | + | chr4_1:81332013-81332032 | None:intergenic | 35.0% | |
| GACACGCTCTTACATTTAAA+AGG | + | chr4_1:81332093-81332112 | None:intergenic | 35.0% | |
| ! | ATCTTCGAAGTATTCAGGTT+CGG | + | chr4_1:81332374-81332393 | None:intergenic | 35.0% |
| CTTCGAAGATAAGCGTAATT+TGG | - | chr4_1:81332384-81332403 | Msa0577150:intron | 35.0% | |
| CTTCAGCATTAAAAGCTACA+CGG | + | chr4_1:81332536-81332555 | None:intergenic | 35.0% | |
| ! | CAATTTTGCAGGAAGATTTG+TGG | - | chr4_1:81332728-81332747 | Msa0577150:intron | 35.0% |
| TTTGATACACAGCATCCAAT+TGG | + | chr4_1:81332879-81332898 | None:intergenic | 35.0% | |
| ATGCTGTGTATCAAATCAAG+TGG | - | chr4_1:81332884-81332903 | Msa0577150:intron | 35.0% | |
| GTCATCAACGAAAATCTAAG+CGG | + | chr4_1:81332941-81332960 | None:intergenic | 35.0% | |
| TTTCAGAATGCATTCGAAGA+GGG | - | chr4_1:81333033-81333052 | Msa0577150:intron | 35.0% | |
| AAACCTTCTTTCCATACAAG+AGG | + | chr4_1:81333062-81333081 | None:intergenic | 35.0% | |
| GGAAAGAAGGTTTACCTATT+TGG | - | chr4_1:81333069-81333088 | Msa0577150:intron | 35.0% | |
| AACCATAAACTACTTACGCT+CGG | + | chr4_1:81333100-81333119 | None:intergenic | 35.0% | |
| AGATAAATATGACCAGATCG+GGG | + | chr4_1:81333172-81333191 | None:intergenic | 35.0% | |
| GTGATCAGAGGAAACATATT+TGG | + | chr4_1:81333399-81333418 | None:intergenic | 35.0% | |
| !! | AACTATTTTTCCTTTGGGTG+GGG | + | chr4_1:81333447-81333466 | None:intergenic | 35.0% |
| GTTTGTATTTATCTCCTTGC+CGG | - | chr4_1:81333515-81333534 | Msa0577150:intron | 35.0% | |
| AAGTCTACACCAGATAAACA+AGG | + | chr4_1:81333542-81333561 | None:intergenic | 35.0% | |
| TTGTTTATCTGGTGTAGACT+TGG | - | chr4_1:81333541-81333560 | Msa0577150:intron | 35.0% | |
| ATCAGCTCATCAAAGTTGAA+AGG | + | chr4_1:81333638-81333657 | None:intergenic | 35.0% | |
| TTTCAACTCCTTTCTGTAAC+AGG | - | chr4_1:81333691-81333710 | Msa0577150:intron | 35.0% | |
| TGATACAACCTGTTACAGAA+AGG | + | chr4_1:81333702-81333721 | None:intergenic | 35.0% | |
| ! | ATCCCAATTTTATCAGATGG+TGG | + | chr4_1:81333731-81333750 | None:intergenic | 35.0% |
| TGAAGCAAATGAAAATGGAC+TGG | - | chr4_1:81333789-81333808 | Msa0577150:intron | 35.0% | |
| ! | GAAGCAAATGAAAATGGACT+GGG | - | chr4_1:81333790-81333809 | Msa0577150:intron | 35.0% |
| AGGAAGTTGAGAGATTACTA+AGG | + | chr4_1:81333929-81333948 | None:intergenic | 35.0% | |
| TACTGCTATGATGATAGGTA+TGG | - | chr4_1:81334207-81334226 | Msa0577150:intron | 35.0% | |
| GAAAAGTGAAAATGCCTCTT+AGG | + | chr4_1:81334365-81334384 | None:intergenic | 35.0% | |
| CGTACTGGAGAGTAAAAATA+GGG | + | chr4_1:81334402-81334421 | None:intergenic | 35.0% | |
| !! | GAAAGCATTTCCATTTACCA+TGG | - | chr4_1:81334465-81334484 | Msa0577150:intron | 35.0% |
| TGCATCATGAATTGAAACCA+TGG | + | chr4_1:81334485-81334504 | None:intergenic | 35.0% | |
| GTTTCCTTCAGAGTAACATT+TGG | - | chr4_1:81334555-81334574 | Msa0577150:intron | 35.0% | |
| ACTTCCAAATGTTACTCTGA+AGG | + | chr4_1:81334562-81334581 | None:intergenic | 35.0% | |
| TTCAGAGTAACATTTGGAAG+TGG | - | chr4_1:81334561-81334580 | Msa0577150:intron | 35.0% | |
| ACATTTGGAAGTGGAACATA+TGG | - | chr4_1:81334570-81334589 | Msa0577150:intron | 35.0% | |
| !!! | TTTTTGTTGTTAGCATGCAC+AGG | - | chr4_1:81334778-81334797 | Msa0577150:CDS | 35.0% |
| CTAAAGCCCAAAAACTTACA+GGG | + | chr4_1:81334951-81334970 | None:intergenic | 35.0% | |
| ! | TCTAAAGCCCAAAAACTTAC+AGG | + | chr4_1:81334952-81334971 | None:intergenic | 35.0% |
| ! | AAATTTTGTATGAGGCATGC+TGG | - | chr4_1:81334994-81335013 | Msa0577150:CDS | 35.0% |
| AAATGGCTGATAGAAATCTG+TGG | + | chr4_1:81335079-81335098 | None:intergenic | 35.0% | |
| GGCTCAACTGGATATATTAT+CGG | + | chr4_1:81335135-81335154 | None:intergenic | 35.0% | |
| CCAAAGACTATCAATCGTAA+CGG | + | chr4_1:81335187-81335206 | None:intergenic | 35.0% | |
| ! | CGTTACGATTGATAGTCTTT+GGG | - | chr4_1:81335185-81335204 | Msa0577150:intron | 35.0% |
| !! | TTGATAGTCTTTGGGTTGTT+TGG | - | chr4_1:81335193-81335212 | Msa0577150:intron | 35.0% |
| !! | TGATAGTCTTTGGGTTGTTT+GGG | - | chr4_1:81335194-81335213 | Msa0577150:intron | 35.0% |
| AGGTCTTCTGTGAATTTGAT+TGG | - | chr4_1:81335285-81335304 | Msa0577150:intron | 35.0% | |
| GGTCTTCTGTGAATTTGATT+GGG | - | chr4_1:81335286-81335305 | Msa0577150:intron | 35.0% | |
| TTGGGAATTAGATGAACTTG+AGG | - | chr4_1:81335304-81335323 | Msa0577150:intron | 35.0% | |
| TATCAGGAAGGTTTAACAAC+AGG | + | chr4_1:81335347-81335366 | None:intergenic | 35.0% | |
| TTGCTATGTTACTGAGTTCT+AGG | - | chr4_1:81335513-81335532 | Msa0577150:intron | 35.0% | |
| !!! | TTACCTTGAAGGCATCTTTT+TGG | + | chr4_1:81335763-81335782 | None:intergenic | 35.0% |
| TTAGGAATTTGTCAGGGAAA+AGG | - | chr4_1:81335868-81335887 | Msa0577150:intron | 35.0% | |
| AATTTGTCAGGGAAAAGGTT+CGG | - | chr4_1:81335873-81335892 | Msa0577150:intron | 35.0% | |
| !! | CTTTTGGTGATTTGTGATCT+TGG | - | chr4_1:81335923-81335942 | Msa0577150:intron | 35.0% |
| TTGCCTACAAGAGAAAAAGA+AGG | + | chr4_1:81335986-81336005 | None:intergenic | 35.0% | |
| ! | TTCTTTTTCTCTTGTAGGCA+AGG | - | chr4_1:81335985-81336004 | Msa0577150:CDS | 35.0% |
| !! | AGGTGTTAAGGTTGGTATTT+GGG | - | chr4_1:81336121-81336140 | Msa0577150:intron | 35.0% |
| ! | AACTGTGACCTTTTCCTTTT+TGG | - | chr4_1:81336150-81336169 | Msa0577150:intron | 35.0% |
| CCGTAATACCTGTTTATGAA+TGG | + | chr4_1:81336442-81336461 | None:intergenic | 35.0% | |
| CATAAACAGGTATTACGGAA+AGG | - | chr4_1:81336444-81336463 | Msa0577150:intron | 35.0% | |
| ! | GACAACAATTGCAATTTTCC+TGG | - | chr4_1:81336494-81336513 | Msa0577150:intron | 35.0% |
| AGTTTATAGAAGGCCTAAGT+CGG | + | chr4_1:81337254-81337273 | None:intergenic | 35.0% | |
| AGCAAAATTGTTGTGAACAC+CGG | - | chr4_1:81337302-81337321 | Msa0577150:intron | 35.0% | |
| TACCAATGCATGATGTTACT+TGG | - | chr4_1:81337373-81337392 | Msa0577150:intron | 35.0% | |
| CTTGGCAATTATCAATGTCA+TGG | - | chr4_1:81337391-81337410 | Msa0577150:intron | 35.0% | |
| ! | AACTTCGTTTTACGAGTCAA+TGG | - | chr4_1:81337496-81337515 | Msa0577150:intron | 35.0% |
| GAATATTTCTCCAACCAGTT+AGG | - | chr4_1:81337560-81337579 | Msa0577150:intron | 35.0% | |
| ATACTAGCAGAAATCCTAAC+TGG | + | chr4_1:81337577-81337596 | None:intergenic | 35.0% | |
| TGTACATATATGGGTGAATC+GGG | - | chr4_1:81337661-81337680 | Msa0577150:intron | 35.0% | |
| ATCCTATGTCAAACAAAAGG+GGG | + | chr4_1:81337687-81337706 | None:intergenic | 35.0% | |
| GATCCTATGTCAAACAAAAG+GGG | + | chr4_1:81337688-81337707 | None:intergenic | 35.0% | |
| TGTTGTCATTAGACAGTTAC+AGG | - | chr4_1:81337962-81337981 | Msa0577150:intron | 35.0% | |
| !! | TGCTTTGAAACACCTTAAGT+TGG | - | chr4_1:81337987-81338006 | Msa0577150:CDS | 35.0% |
| GGCTCAACTGGATATATTAT+TGG | + | chr4_1:81335135-81335154 | None:intergenic | 35.0% | |
| TCTTGTTGACAAGGGTTATT+TGG | + | chr4_1:81338456-81338475 | None:intergenic | 35.0% | |
| AATAACCCTTGTCAACAAGA+TGG | - | chr4_1:81338456-81338475 | Msa0577150:intron | 35.0% | |
| ! | ATGTATGTATTGCTTGTTGC+AGG | - | chr4_1:81338524-81338543 | Msa0577150:CDS | 35.0% |
| CTGTGAATTTGATGAACTTG+AGG | - | chr4_1:81338551-81338570 | Msa0577150:CDS | 35.0% | |
| GAGGTAATGAACTCACTTTA+TGG | - | chr4_1:81338570-81338589 | Msa0577150:CDS | 35.0% | |
| CTTATCTTATGTCTAACAGG+AGG | + | chr4_1:81338756-81338775 | None:intergenic | 35.0% | |
| ! | TCTTTCTTTAGGAACTTGTC+AGG | - | chr4_1:81338834-81338853 | Msa0577150:five_prime_UTR | 35.0% |
| ! | CTTTCTTTAGGAACTTGTCA+GGG | - | chr4_1:81338835-81338854 | Msa0577150:five_prime_UTR | 35.0% |
| ATGGTGTTTGCGTTCGAATT+CGG | + | chr4_1:81332208-81332227 | None:intergenic | 40.0% | |
| AACACCATCACAATGAGGAA+AGG | - | chr4_1:81332220-81332239 | Msa0577150:intron | 40.0% | |
| ! | TTTTCTTGAGACGAAGCAAC+AGG | + | chr4_1:81332295-81332314 | None:intergenic | 40.0% |
| !!! | GTTTTGAGGCGTTTAGCTTT+AGG | + | chr4_1:81332337-81332356 | None:intergenic | 40.0% |
| ! | ATTGGGGTTTAGAGGTTTTG+AGG | + | chr4_1:81332351-81332370 | None:intergenic | 40.0% |
| ! | AAGTATTCAGGTTCGGATTG+GGG | + | chr4_1:81332367-81332386 | None:intergenic | 40.0% |
| ! | GAAGTATTCAGGTTCGGATT+GGG | + | chr4_1:81332368-81332387 | None:intergenic | 40.0% |
| ! | CGCTTATCTTCGAAGTATTC+AGG | + | chr4_1:81332379-81332398 | None:intergenic | 40.0% |
| GTAATATCAGTGGGACCAAT+TGG | - | chr4_1:81332861-81332880 | Msa0577150:intron | 40.0% | |
| GTTTCAGAATGCATTCGAAG+AGG | - | chr4_1:81333032-81333051 | Msa0577150:intron | 40.0% | |
| ! | GGTTTCATCATTTTGCGAGT+TGG | - | chr4_1:81333116-81333135 | Msa0577150:intron | 40.0% |
| ATAAATATGACCAGATCGGG+GGG | + | chr4_1:81333170-81333189 | None:intergenic | 40.0% | |
| GATAAATATGACCAGATCGG+GGG | + | chr4_1:81333171-81333190 | None:intergenic | 40.0% | |
| CATTGCTTGATCCACTAAAC+TGG | - | chr4_1:81333421-81333440 | Msa0577150:intron | 40.0% | |
| TACACCAGATAAACAAGGTC+CGG | + | chr4_1:81333537-81333556 | None:intergenic | 40.0% | |
| GATTAACTCAGTTCAGAGAG+AGG | - | chr4_1:81333748-81333767 | Msa0577150:intron | 40.0% | |
| GAGACTTCAGTCTATCAACT+TGG | + | chr4_1:81333981-81334000 | None:intergenic | 40.0% | |
| !!! | TGATAGTTTTTGGGTACAGG+CGG | + | chr4_1:81334148-81334167 | None:intergenic | 40.0% |
| GAAAACCTGTTCTTCCTAAG+AGG | - | chr4_1:81334348-81334367 | Msa0577150:intron | 40.0% | |
| AAATGCCTCTTAGGAAGAAC+AGG | + | chr4_1:81334356-81334375 | None:intergenic | 40.0% | |
| GCGTACTGGAGAGTAAAAAT+AGG | + | chr4_1:81334403-81334422 | None:intergenic | 40.0% | |
| GCTATTTAACAAGTGCGTAC+TGG | + | chr4_1:81334417-81334436 | None:intergenic | 40.0% | |
| TTTGCTACATCAAGGACAAC+AGG | + | chr4_1:81334826-81334845 | None:intergenic | 40.0% | |
| !! | TGCTTTGAAACACCTGAAGT+TGG | - | chr4_1:81334896-81334915 | Msa0577150:intron | 40.0% |
| ! | TGCTTGCCCTGTAAGTTTTT+GGG | - | chr4_1:81334942-81334961 | Msa0577150:intron | 40.0% |
| !! | GGCTTTAGAATGTTACTCAC+AGG | - | chr4_1:81334963-81334982 | Msa0577150:intron | 40.0% |
| TGAATTTGAACAAAGCACGG+AGG | - | chr4_1:81335107-81335126 | Msa0577150:intron | 40.0% | |
| ! | CCGTTACGATTGATAGTCTT+TGG | - | chr4_1:81335184-81335203 | Msa0577150:intron | 40.0% |
| ! | ACTTATGCATTGCTTGTTGC+AGG | - | chr4_1:81335265-81335284 | Msa0577150:intron | 40.0% |
| TGGCTATTATAAGCGGTAGA+AGG | + | chr4_1:81335400-81335419 | None:intergenic | 40.0% | |
| !! | GAATCTTGGTGTTATTCTGC+AGG | - | chr4_1:81335427-81335446 | Msa0577150:intron | 40.0% |
| GAACTCAGTAACATAGCAAC+AGG | + | chr4_1:81335512-81335531 | None:intergenic | 40.0% | |
| CTAGTAGAAGGACATGTAAG+AGG | + | chr4_1:81335612-81335631 | None:intergenic | 40.0% | |
| GTTTATCAGTAAACTCCTGC+AGG | + | chr4_1:81335712-81335731 | None:intergenic | 40.0% | |
| AGACCAAAAAGATGCCTTCA+AGG | - | chr4_1:81335757-81335776 | Msa0577150:CDS | 40.0% | |
| ATTTGTCAGGGAAAAGGTTC+GGG | - | chr4_1:81335874-81335893 | Msa0577150:intron | 40.0% | |
| AGCAAAGAAAGCCAATAGAG+AGG | - | chr4_1:81335898-81335917 | Msa0577150:intron | 40.0% | |
| !!! | AGCCAATAGAGAGGTACTTT+TGG | - | chr4_1:81335907-81335926 | Msa0577150:intron | 40.0% |
| !! | CACCAAAAGTACCTCTCTAT+TGG | + | chr4_1:81335912-81335931 | None:intergenic | 40.0% |
| !! | CAGGTGTTAAGGTTGGTATT+TGG | - | chr4_1:81336120-81336139 | Msa0577150:intron | 40.0% |
| AGATGGACATATCCATATCC+AGG | - | chr4_1:81336290-81336309 | Msa0577150:intron | 40.0% | |
| GATGGACATATCCATATCCA+GGG | - | chr4_1:81336291-81336310 | Msa0577150:intron | 40.0% | |
| TGCAGTCTCCATTCATAAAC+AGG | - | chr4_1:81336431-81336450 | Msa0577150:intron | 40.0% | |
| ! | AAATTTGATGGAGCACCAAG+AGG | + | chr4_1:81336563-81336582 | None:intergenic | 40.0% |
| TCCTAGATAAGTGAAGTAGG+TGG | - | chr4_1:81336640-81336659 | Msa0577150:intron | 40.0% | |
| ACCACCTACTTCACTTATCT+AGG | + | chr4_1:81336644-81336663 | None:intergenic | 40.0% | |
| GGATAATTGAGACGTGTTTC+TGG | - | chr4_1:81336666-81336685 | Msa0577150:intron | 40.0% | |
| ATCAATTGTCCTCTTCCTGA+TGG | - | chr4_1:81336928-81336947 | Msa0577150:intron | 40.0% | |
| GTTTGACAAAGACCAGAACA+GGG | + | chr4_1:81337045-81337064 | None:intergenic | 40.0% | |
| TGTTTGACAAAGACCAGAAC+AGG | + | chr4_1:81337046-81337065 | None:intergenic | 40.0% | |
| TGCCAAGTAACATCATGCAT+TGG | + | chr4_1:81337378-81337397 | None:intergenic | 40.0% | |
| CAATTATCAATGTCATGGGC+TGG | - | chr4_1:81337396-81337415 | Msa0577150:intron | 40.0% | |
| GAAGCCAGTATACAAACTAC+TGG | + | chr4_1:81337474-81337493 | None:intergenic | 40.0% | |
| TAGCAGAAATCCTAACTGGT+TGG | + | chr4_1:81337573-81337592 | None:intergenic | 40.0% | |
| GTAGAGACAACAAATGAGCA+TGG | - | chr4_1:81337610-81337629 | Msa0577150:intron | 40.0% | |
| ! | CATTTATAGTCGAGTTCTGG+AGG | - | chr4_1:81337754-81337773 | Msa0577150:intron | 40.0% |
| CATTTGCTTGCTTGTCATGT+TGG | - | chr4_1:81337777-81337796 | Msa0577150:intron | 40.0% | |
| ATGTTACTCCAAACAGAGGT+GGG | + | chr4_1:81337830-81337849 | None:intergenic | 40.0% | |
| AATGTTACTCCAAACAGAGG+TGG | + | chr4_1:81337831-81337850 | None:intergenic | 40.0% | |
| !!! | GAGGATTTGTTTTGGAGAGT+AGG | + | chr4_1:81337878-81337897 | None:intergenic | 40.0% |
| !! | TCAGAGAGGAGGATTTGTTT+TGG | + | chr4_1:81337886-81337905 | None:intergenic | 40.0% |
| ! | ACAAATCCTCCTCTCTGAAA+AGG | - | chr4_1:81337888-81337907 | Msa0577150:intron | 40.0% |
| ! | CAAATCCTCCTCTCTGAAAA+GGG | - | chr4_1:81337889-81337908 | Msa0577150:intron | 40.0% |
| ! | TGCTTGCCCTATAAGTTTTC+TGG | - | chr4_1:81338017-81338036 | Msa0577150:intron | 40.0% |
| ! | GCTTGCCCTATAAGTTTTCT+GGG | - | chr4_1:81338018-81338037 | Msa0577150:intron | 40.0% |
| ! | GGATATTTTTCCGTACAGCA+TGG | - | chr4_1:81338405-81338424 | Msa0577150:intron | 40.0% |
| GTGGTTGACTGAACCTTAAA+TGG | - | chr4_1:81338730-81338749 | Msa0577150:five_prime_UTR | 40.0% | |
| !!! | GTTTTGAAGGGGTGAATCGA+AGG | + | chr4_1:81332147-81332166 | None:intergenic | 45.0% |
| ACGCAAACACCATCACAATG+AGG | - | chr4_1:81332215-81332234 | Msa0577150:intron | 45.0% | |
| AGCACCTTTCCTCATTGTGA+TGG | + | chr4_1:81332227-81332246 | None:intergenic | 45.0% | |
| !! | GGAATCAGGTTGGGAATCTT+CGG | + | chr4_1:81332269-81332288 | None:intergenic | 45.0% |
| ! | AACAGGTTGGGAATCAGGTT+GGG | + | chr4_1:81332278-81332297 | None:intergenic | 45.0% |
| TTGAGACGAAGCAACAGGTT+GGG | + | chr4_1:81332290-81332309 | None:intergenic | 45.0% | |
| !! | GAGGCGTTTAGCTTTAGGTT+TGG | + | chr4_1:81332332-81332351 | None:intergenic | 45.0% |
| ! | CGAAGTATTCAGGTTCGGAT+TGG | + | chr4_1:81332369-81332388 | None:intergenic | 45.0% |
| AACAAACCTCAGTGCCAACA+GGG | + | chr4_1:81332765-81332784 | None:intergenic | 45.0% | |
| CGGCCTTAATACTCACTTCT+AGG | + | chr4_1:81332921-81332940 | None:intergenic | 45.0% | |
| TGGCCTCTTGTATGGAAAGA+AGG | - | chr4_1:81333056-81333075 | Msa0577150:intron | 45.0% | |
| CACCGAGCGTAAGTAGTTTA+TGG | - | chr4_1:81333095-81333114 | Msa0577150:intron | 45.0% | |
| !!! | CATCATTTTGCGAGTTGGTC+AGG | - | chr4_1:81333121-81333140 | Msa0577150:intron | 45.0% |
| !! | GGTCAGGCAACTAATTTGCT+TGG | - | chr4_1:81333137-81333156 | Msa0577150:intron | 45.0% |
| !! | CAGGCAACTAATTTGCTTGG+TGG | - | chr4_1:81333140-81333159 | Msa0577150:intron | 45.0% |
| CTCAACTGGTCATGCATCAA+GGG | - | chr4_1:81333227-81333246 | Msa0577150:intron | 45.0% | |
| TCAACTGGTCATGCATCAAG+GGG | - | chr4_1:81333228-81333247 | Msa0577150:intron | 45.0% | |
| CTGCATACCTGTTGTTGTAG+CGG | - | chr4_1:81333264-81333283 | Msa0577150:intron | 45.0% | |
| AACGCGTCTTCATGATACAC+AGG | + | chr4_1:81333310-81333329 | None:intergenic | 45.0% | |
| TCAAGCAATGTCGTGATCAG+AGG | + | chr4_1:81333411-81333430 | None:intergenic | 45.0% | |
| !!! | GATAGTTTTTGGGTACAGGC+GGG | + | chr4_1:81334147-81334166 | None:intergenic | 45.0% |
| ! | CTGCTTGCCCTGTAAGTTTT+TGG | - | chr4_1:81334941-81334960 | Msa0577150:intron | 45.0% |
| ATATCCAGTTGAGCCAAAGC+CGG | - | chr4_1:81335140-81335159 | Msa0577150:CDS | 45.0% | |
| TCAGTAACATAGCAACAGGC+AGG | + | chr4_1:81335508-81335527 | None:intergenic | 45.0% | |
| ACTTATTGAGGGGGAAGAGT+TGG | - | chr4_1:81335730-81335749 | Msa0577150:intron | 45.0% | |
| AGCCATTGCTGAAATGAGTG+CGG | - | chr4_1:81336022-81336041 | Msa0577150:intron | 45.0% | |
| TTCCGCACTCATTTCAGCAA+TGG | + | chr4_1:81336027-81336046 | None:intergenic | 45.0% | |
| ACCTGATGTGTCAGGTGTTA+AGG | - | chr4_1:81336109-81336128 | Msa0577150:intron | 45.0% | |
| ACCTTAACACCTGACACATC+AGG | + | chr4_1:81336113-81336132 | None:intergenic | 45.0% | |
| GATGTGTCAGGTGTTAAGGT+TGG | - | chr4_1:81336113-81336132 | Msa0577150:intron | 45.0% | |
| GTATTACGGAAAGGCTCATG+AGG | - | chr4_1:81336453-81336472 | Msa0577150:intron | 45.0% | |
| AAATACGGGCAAAACAAGCC+AGG | + | chr4_1:81336515-81336534 | None:intergenic | 45.0% | |
| GATAAGTGAAGTAGGTGGTG+AGG | - | chr4_1:81336645-81336664 | Msa0577150:intron | 45.0% | |
| TTGTAGCTTCCATCAGGAAG+AGG | + | chr4_1:81336940-81336959 | None:intergenic | 45.0% | |
| GAGATGTACTATCCCTGTTC+TGG | - | chr4_1:81337030-81337049 | Msa0577150:intron | 45.0% | |
| CAGCACACATCTATGAAGCA+CGG | + | chr4_1:81337350-81337369 | None:intergenic | 45.0% | |
| TATACGTTCCCACCTCTGTT+TGG | - | chr4_1:81337819-81337838 | Msa0577150:CDS | 45.0% | |
| !! | TCCTCTCTGAAAAGGGTGTT+GGG | - | chr4_1:81337896-81337915 | Msa0577150:intron | 45.0% |
| !! | GTGGTTATGATGGAGTGTTG+CGG | - | chr4_1:81338131-81338150 | Msa0577150:CDS | 45.0% |
| ! | AGGGAATTTTGTACGAGGCA+TGG | - | chr4_1:81338183-81338202 | Msa0577150:intron | 45.0% |
| CCTGTCCATCTTGTTGACAA+GGG | + | chr4_1:81338464-81338483 | None:intergenic | 45.0% | |
| ACCTGTCCATCTTGTTGACA+AGG | + | chr4_1:81338465-81338484 | None:intergenic | 45.0% | |
| CAACAAGATGGACAGGTAAC+AGG | - | chr4_1:81338468-81338487 | Msa0577150:intron | 45.0% | |
| TCAACTGCAACACATCAGGA+AGG | + | chr4_1:81338606-81338625 | None:intergenic | 45.0% | |
| TCTCTCAACTGCAACACATC+AGG | + | chr4_1:81338610-81338629 | None:intergenic | 45.0% | |
| GTCTAACAGGAGGCCATTTA+AGG | + | chr4_1:81338746-81338765 | None:intergenic | 45.0% | |
| TTAGGAACTTGTCAGGGAAG+TGG | - | chr4_1:81338841-81338860 | Msa0577150:five_prime_UTR | 45.0% | |
| AACTTGTCAGGGAAGTGGTT+TGG | - | chr4_1:81338846-81338865 | Msa0577150:five_prime_UTR | 45.0% | |
| ACTTGTCAGGGAAGTGGTTT+GGG | - | chr4_1:81338847-81338866 | Msa0577150:five_prime_UTR | 45.0% | |
| !! | TATATTTATATATAAAATCA+AGG | + | chr4_1:81332070-81332089 | None:intergenic | 5.0% |
| !! | TTTGTTTATTAATATTATTA+AGG | - | chr4_1:81332594-81332613 | Msa0577150:CDS | 5.0% |
| !! | TGAATCGAAGGCGCTAGATC+CGG | + | chr4_1:81332135-81332154 | None:intergenic | 50.0% |
| ! | TTGGGAATCTTCGGTGTGCT+TGG | + | chr4_1:81332260-81332279 | None:intergenic | 50.0% |
| ! | CAACAGGTTGGGAATCAGGT+TGG | + | chr4_1:81332279-81332298 | None:intergenic | 50.0% |
| ! | GAAGCAACAGGTTGGGAATC+AGG | + | chr4_1:81332283-81332302 | None:intergenic | 50.0% |
| CTTGAGACGAAGCAACAGGT+TGG | + | chr4_1:81332291-81332310 | None:intergenic | 50.0% | |
| ! | AGGTTCGGATTGGGGTTTAG+AGG | + | chr4_1:81332359-81332378 | None:intergenic | 50.0% |
| TGGCTCGAAACATTCCCTGT+TGG | - | chr4_1:81332748-81332767 | Msa0577150:intron | 50.0% | |
| AACATTCCCTGTTGGCACTG+AGG | - | chr4_1:81332756-81332775 | Msa0577150:intron | 50.0% | |
| CAACAAACCTCAGTGCCAAC+AGG | + | chr4_1:81332766-81332785 | None:intergenic | 50.0% | |
| CAGAATGCATTCGAAGAGGG+TGG | - | chr4_1:81333036-81333055 | Msa0577150:intron | 50.0% | |
| !! | TACGCTCGGTGCAACCAAAT+AGG | + | chr4_1:81333086-81333105 | None:intergenic | 50.0% |
| GTTGAGCTGCAAACGACAAC+AGG | + | chr4_1:81333213-81333232 | None:intergenic | 50.0% | |
| ! | GTTGTCGTTTGCAGCTCAAC+TGG | - | chr4_1:81333213-81333232 | Msa0577150:intron | 50.0% |
| GCTCAACTGGTCATGCATCA+AGG | - | chr4_1:81333226-81333245 | Msa0577150:intron | 50.0% | |
| GAGCTTACCGCTACAACAAC+AGG | + | chr4_1:81333274-81333293 | None:intergenic | 50.0% | |
| TAGCGGTAAGCTCTCACACT+GGG | - | chr4_1:81333281-81333300 | Msa0577150:intron | 50.0% | |
| CAGATAAACAAGGTCCGGCA+AGG | + | chr4_1:81333532-81333551 | None:intergenic | 50.0% | |
| ! | CTTGCCGGACCTTGTTTATC+TGG | - | chr4_1:81333530-81333549 | Msa0577150:intron | 50.0% |
| TCTTGCGTTGCACCCAAAGA+AGG | - | chr4_1:81334010-81334029 | Msa0577150:intron | 50.0% | |
| TTTGGGTACAGGCGGGAAAA+GGG | + | chr4_1:81334140-81334159 | None:intergenic | 50.0% | |
| !! | TTTTGGGTACAGGCGGGAAA+AGG | + | chr4_1:81334141-81334160 | None:intergenic | 50.0% |
| !! | ATTACCGGCTTTGGCTCAAC+TGG | + | chr4_1:81335147-81335166 | None:intergenic | 50.0% |
| ACCTGACACATCAGGTGCAT+CGG | + | chr4_1:81336105-81336124 | None:intergenic | 50.0% | |
| GACATATCCATATCCAGGGC+AGG | - | chr4_1:81336295-81336314 | Msa0577150:intron | 50.0% | |
| AAGTTTACCCGGCAACCTCT+TGG | - | chr4_1:81336545-81336564 | Msa0577150:intron | 50.0% | |
| ! | ATTCGCGTCGAAAGCATGTC+CGG | + | chr4_1:81337324-81337343 | None:intergenic | 50.0% |
| !! | AATGTCATGGGCTGGAATGC+TGG | - | chr4_1:81337404-81337423 | Msa0577150:intron | 50.0% |
| !! | GGCCCCCTTTTGTTTGACAT+AGG | - | chr4_1:81337682-81337701 | Msa0577150:intron | 50.0% |
| !! | TGCTTGTCATGTTGGCTTCG+TGG | - | chr4_1:81337785-81337804 | Msa0577150:intron | 50.0% |
| ! | CAACACCCTTTTCAGAGAGG+AGG | + | chr4_1:81337897-81337916 | None:intergenic | 50.0% |
| ! | CTCCTCTCTGAAAAGGGTGT+TGG | - | chr4_1:81337895-81337914 | Msa0577150:intron | 50.0% |
| ! | TCCCAACACCCTTTTCAGAG+AGG | + | chr4_1:81337900-81337919 | None:intergenic | 50.0% |
| !! | GGAGACAGTTACCGACTTAC+TGG | - | chr4_1:81337917-81337936 | Msa0577150:intron | 50.0% |
| !! | ACAGTTACCGACTTACTGGC+AGG | - | chr4_1:81337921-81337940 | Msa0577150:intron | 50.0% |
| TACGAGGCATGGTTCCTCAT+CGG | - | chr4_1:81338194-81338213 | Msa0577150:intron | 50.0% | |
| !! | CTTACTGGCTTTGGCTCAAC+TGG | + | chr4_1:81338337-81338356 | None:intergenic | 50.0% |
| CCCTTGTCAACAAGATGGAC+AGG | - | chr4_1:81338461-81338480 | Msa0577150:intron | 50.0% | |
| GAAGAGGGTGGCCTCTTGTA+TGG | - | chr4_1:81333048-81333067 | Msa0577150:intron | 55.0% | |
| ATATGACCAGATCGGGGGGT+TGG | + | chr4_1:81333166-81333185 | None:intergenic | 55.0% | |
| GTAGCGGTAAGCTCTCACAC+TGG | - | chr4_1:81333280-81333299 | Msa0577150:intron | 55.0% | |
| TTTGGGTGGGGCCAGTTTAG+TGG | + | chr4_1:81333435-81333454 | None:intergenic | 55.0% | |
| ACTAAACTGGCCCCACCCAA+AGG | - | chr4_1:81333434-81333453 | Msa0577150:intron | 55.0% | |
| CTGGGTTCCGTACATTCCTC+TGG | - | chr4_1:81333808-81333827 | Msa0577150:intron | 55.0% | |
| CGCTGCTCCAGAGGAATGTA+CGG | + | chr4_1:81333818-81333837 | None:intergenic | 55.0% | |
| !! | CGTACATTCCTCTGGAGCAG+CGG | - | chr4_1:81333816-81333835 | Msa0577150:intron | 55.0% |
| AGGTGCATCGGGAGATGGAA+CGG | + | chr4_1:81336093-81336112 | None:intergenic | 55.0% | |
| ACATCAGGTGCATCGGGAGA+TGG | + | chr4_1:81336098-81336117 | None:intergenic | 55.0% | |
| CCTGACACATCAGGTGCATC+GGG | + | chr4_1:81336104-81336123 | None:intergenic | 55.0% | |
| ! | ATGGAGCACCAAGAGGTTGC+CGG | + | chr4_1:81336556-81336575 | None:intergenic | 55.0% |
| GAAGGCCTAAGTCGGAAACC+AGG | + | chr4_1:81337246-81337265 | None:intergenic | 55.0% | |
| GATGCATACCGCTGCTCCAG+AGG | + | chr4_1:81333827-81333846 | None:intergenic | 60.0% | |
| GGTGCATCGGGAGATGGAAC+GGG | + | chr4_1:81336092-81336111 | None:intergenic | 60.0% | |
| CCCGATGCACCTGATGTGTC+AGG | - | chr4_1:81336101-81336120 | Msa0577150:intron | 60.0% | |
| CGGTCATCCTGCCCTGGATA+TGG | + | chr4_1:81336305-81336324 | None:intergenic | 60.0% | |
| CATCATCGGTCATCCTGCCC+TGG | + | chr4_1:81336311-81336330 | None:intergenic | 60.0% | |
| ! | TGGAGCACCAAGAGGTTGCC+GGG | + | chr4_1:81336555-81336574 | None:intergenic | 60.0% |
| GCCTAAGTCGGAAACCAGGC+GGG | + | chr4_1:81337242-81337261 | None:intergenic | 60.0% | |
| GGCCTAAGTCGGAAACCAGG+CGG | + | chr4_1:81337243-81337262 | None:intergenic | 60.0% | |
| GACGACGCCTGCCAGTAAGT+CGG | + | chr4_1:81337931-81337950 | None:intergenic | 60.0% | |
| ! | ACTGGCAGGCGTCGTCATAC+TGG | - | chr4_1:81337935-81337954 | Msa0577150:intron | 60.0% |
| CGTACGCTTCAGCTGACCAC+TGG | - | chr4_1:81338071-81338090 | Msa0577150:intron | 60.0% | |
| ! | AGTCGGAAACCAGGCGGGCT+CGG | + | chr4_1:81337237-81337256 | None:intergenic | 65.0% |
| GCCCGCCTGGTTTCCGACTT+AGG | - | chr4_1:81337238-81337257 | Msa0577150:intron | 65.0% | |
| ! | GCAGGCGTCGTCATACTGGC+AGG | - | chr4_1:81337939-81337958 | Msa0577150:intron | 65.0% |
| TGGTGGCCAACCCCCCGATC+TGG | - | chr4_1:81333157-81333176 | Msa0577150:intron | 70.0% | |
| AAAGCTCACCCGAGCCCGCC+TGG | - | chr4_1:81337225-81337244 | Msa0577150:intron | 70.0% | |
| ! | GTCGGAAACCAGGCGGGCTC+GGG | + | chr4_1:81337236-81337255 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 81332009 | 81338889 | 81332009 | ID=Msa0577150;Name=Msa0577150 |
| chr4_1 | mRNA | 81332009 | 81338889 | 81332009 | ID=Msa0577150-mRNA-1;Parent=Msa0577150;Name=Msa0577150-mRNA-1;_AED=0.22;_eAED=0.22;_QI=223|0.86|0.81|0.87|0.93|0.93|16|0|382 |
| chr4_1 | exon | 81332009 | 81332053 | 81332009 | ID=Msa0577150-mRNA-1:exon:29332;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81332547 | 81332615 | 81332547 | ID=Msa0577150-mRNA-1:exon:29331;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81334424 | 81334462 | 81334424 | ID=Msa0577150-mRNA-1:exon:29330;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81334768 | 81334896 | 81334768 | ID=Msa0577150-mRNA-1:exon:29329;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81334979 | 81335026 | 81334979 | ID=Msa0577150-mRNA-1:exon:29328;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81335120 | 81335182 | 81335120 | ID=Msa0577150-mRNA-1:exon:29327;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81335573 | 81335611 | 81335573 | ID=Msa0577150-mRNA-1:exon:29326;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81335737 | 81335816 | 81335737 | ID=Msa0577150-mRNA-1:exon:29325;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81335947 | 81336005 | 81335947 | ID=Msa0577150-mRNA-1:exon:29324;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81336867 | 81336926 | 81336867 | ID=Msa0577150-mRNA-1:exon:29323;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81337061 | 81337185 | 81337061 | ID=Msa0577150-mRNA-1:exon:29322;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81337613 | 81337671 | 81337613 | ID=Msa0577150-mRNA-1:exon:29321;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81337796 | 81337859 | 81337796 | ID=Msa0577150-mRNA-1:exon:29320;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81337974 | 81338027 | 81337974 | ID=Msa0577150-mRNA-1:exon:29319;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81338121 | 81338159 | 81338121 | ID=Msa0577150-mRNA-1:exon:29318;Parent=Msa0577150-mRNA-1 |
| chr4_1 | exon | 81338493 | 81338889 | 81338493 | ID=Msa0577150-mRNA-1:exon:29317;Parent=Msa0577150-mRNA-1 |
| chr4_1 | five_prime_UTR | 81338667 | 81338889 | 81338667 | ID=Msa0577150-mRNA-1:five_prime_utr;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81338493 | 81338666 | 81338493 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81338121 | 81338159 | 81338121 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81337974 | 81338027 | 81337974 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81337796 | 81337859 | 81337796 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81337613 | 81337671 | 81337613 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81337061 | 81337185 | 81337061 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81336867 | 81336926 | 81336867 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81335947 | 81336005 | 81335947 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81335737 | 81335816 | 81335737 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81335573 | 81335611 | 81335573 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81335120 | 81335182 | 81335120 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81334979 | 81335026 | 81334979 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81334768 | 81334896 | 81334768 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81334424 | 81334462 | 81334424 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81332547 | 81332615 | 81332547 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| chr4_1 | CDS | 81332009 | 81332053 | 81332009 | ID=Msa0577150-mRNA-1:cds;Parent=Msa0577150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
