Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704770 | XP_039685256.1 | 98.256 | 344 | 6 | 0 | 1 | 344 | 1 | 344 | 0.0 | 696 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704770 | sp|A2RVJ8|HIT4_ARATH | 66.181 | 343 | 105 | 2 | 2 | 344 | 101 | 432 | 1.35e-164 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704770 | A0A396GRK1 | 98.256 | 344 | 6 | 0 | 1 | 344 | 1 | 344 | 0.0 | 696 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0577150 | Msa0704770 | 0.923096 | 4.161789e-89 | -8.615850e-47 |
| Msa0577160 | Msa0704770 | 0.894411 | 2.528954e-75 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704770 | MtrunA17_Chr8g0382951 | 98.256 | 344 | 6 | 0 | 1 | 344 | 1 | 344 | 0.0 | 696 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0704770 | AT5G10010.1 | 66.181 | 343 | 105 | 2 | 2 | 344 | 101 | 432 | 1.38e-165 | 471 |
| Msa0704770 | AT5G64910.4 | 60.923 | 325 | 123 | 4 | 23 | 344 | 149 | 472 | 1.66e-124 | 367 |
| Msa0704770 | AT5G64910.3 | 60.923 | 325 | 123 | 4 | 23 | 344 | 149 | 472 | 1.66e-124 | 367 |
| Msa0704770 | AT5G64910.5 | 60.923 | 325 | 123 | 4 | 23 | 344 | 149 | 472 | 1.66e-124 | 367 |
| Msa0704770 | AT5G64910.1 | 59.677 | 310 | 122 | 3 | 23 | 330 | 149 | 457 | 1.35e-114 | 342 |
| Msa0704770 | AT5G64910.2 | 59.355 | 310 | 120 | 4 | 23 | 330 | 149 | 454 | 5.60e-112 | 336 |
Find 108 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCACCATCTGATAAAAT+TGG | 0.157161 | 4_4:-77250770 | Msa0704770:CDS |
| GGCTCAACTGGATATATTAT+TGG | 0.161747 | 4_4:+77246173 | None:intergenic |
| TCAAATTCATCTTCCTTAAA+TGG | 0.186723 | 4_4:+77246212 | None:intergenic |
| TCAAATTCATCTTCCTTAAA+TGG | 0.186723 | 4_4:+77249402 | None:intergenic |
| CTTCGAAGATAAGCGTAATT+TGG | 0.193911 | 4_4:-77252112 | Msa0704770:intron |
| CGCTTATCTTCGAAGTATTC+AGG | 0.208544 | 4_4:+77252120 | None:intergenic |
| GGAAAGAAGGTTTACCTATT+TGG | 0.212336 | 4_4:-77251427 | Msa0704770:CDS |
| TCCTATGAAGCAAATGAAAA+TGG | 0.241093 | 4_4:-77250711 | Msa0704770:CDS |
| GACACGCTCTTACATTTAAA+AGG | 0.263703 | 4_4:+77252406 | None:intergenic |
| AGATTTCTATCAGCCATTTA+AGG | 0.268276 | 4_4:-77249415 | Msa0704770:CDS |
| CTTACTGGCTTTGGCTCAAC+TGG | 0.294060 | 4_4:+77246161 | None:intergenic |
| TCTTTAATCTATCCAACTTC+AGG | 0.314948 | 4_4:+77249587 | None:intergenic |
| TAAATCATAATTACCGGCTT+TGG | 0.319009 | 4_4:+77249342 | None:intergenic |
| GGCTCAACTGGATATATTAT+CGG | 0.334796 | 4_4:+77249363 | None:intergenic |
| ACTTGTCAGGGAAGTGGTTT+GGG | 0.334902 | 4_4:-77245644 | Msa0704770:CDS |
| GAAGTATTCAGGTTCGGATT+GGG | 0.348830 | 4_4:+77252131 | None:intergenic |
| TAAATGATACTTACTGGCTT+TGG | 0.353260 | 4_4:+77246152 | None:intergenic |
| TGCAGTCTCCATTCATAAAC+AGG | 0.360207 | 4_4:-77248062 | Msa0704770:intron |
| AACTTGTCAGGGAAGTGGTT+TGG | 0.362570 | 4_4:-77245645 | Msa0704770:CDS |
| AATATCTTTACTTACCTTGA+AGG | 0.363364 | 4_4:+77248722 | None:intergenic |
| GAAGCAACAGGTTGGGAATC+AGG | 0.366089 | 4_4:+77252216 | None:intergenic |
| ATTACCGGCTTTGGCTCAAC+TGG | 0.372230 | 4_4:+77249351 | None:intergenic |
| CACCAAAAGTACCTCTCTAT+TGG | 0.385186 | 4_4:+77248584 | None:intergenic |
| GTTGTCGTTTGCAGCTCAAC+TGG | 0.393426 | 4_4:-77251282 | Msa0704770:intron |
| TTCCACCATCTGATAAAATT+GGG | 0.396244 | 4_4:-77250769 | Msa0704770:CDS |
| ATGGTGTTTGCGTTCGAATT+CGG | 0.399450 | 4_4:+77252291 | None:intergenic |
| CCGTAATACCTGTTTATGAA+TGG | 0.401773 | 4_4:+77248054 | None:intergenic |
| TACGCTCGGTGCAACCAAAT+AGG | 0.402505 | 4_4:+77251413 | None:intergenic |
| CGAAGTATTCAGGTTCGGAT+TGG | 0.407077 | 4_4:+77252130 | None:intergenic |
| ATTTGTCAGGGAAAAGGTTC+GGG | 0.419026 | 4_4:-77248619 | Msa0704770:CDS |
| CAACAAACCTCAGTGCCAAC+AGG | 0.419531 | 4_4:+77251733 | None:intergenic |
| TCTTCTTATCGATTTGAATC+CGG | 0.420096 | 4_4:-77252383 | Msa0704770:five_prime_UTR |
| GTAATATCAGTGGGACCAAT+TGG | 0.421390 | 4_4:-77251635 | Msa0704770:intron |
| TCTTTCTTTAGGAACTTGTC+AGG | 0.421962 | 4_4:-77245657 | Msa0704770:intron |
| AGGTTCGGATTGGGGTTTAG+AGG | 0.423673 | 4_4:+77252140 | None:intergenic |
| ATCTTCGAAGTATTCAGGTT+CGG | 0.427533 | 4_4:+77252125 | None:intergenic |
| ACCTGATGTGTCAGGTGTTA+AGG | 0.432564 | 4_4:-77248384 | Msa0704770:intron |
| GAAGAGGGTGGCCTCTTGTA+TGG | 0.433536 | 4_4:-77251448 | Msa0704770:CDS |
| GGAATCAGGTTGGGAATCTT+CGG | 0.437567 | 4_4:+77252230 | None:intergenic |
| TCTTTCTTTAGGAATTTGTC+AGG | 0.440455 | 4_4:-77248632 | Msa0704770:intron |
| AGGTCTTCTGTGAATTTGAT+TGG | 0.443236 | 4_4:-77249210 | Msa0704770:CDS |
| GAGGCGTTTAGCTTTAGGTT+TGG | 0.448003 | 4_4:+77252167 | None:intergenic |
| AATTTGTCAGGGAAAAGGTT+CGG | 0.448510 | 4_4:-77248620 | Msa0704770:CDS |
| TTAGGAATTTGTCAGGGAAA+AGG | 0.455764 | 4_4:-77248625 | Msa0704770:intron |
| AGCACCTTTCCTCATTGTGA+TGG | 0.464290 | 4_4:+77252272 | None:intergenic |
| TTTGATACACAGCATCCAAT+TGG | 0.469259 | 4_4:+77251620 | None:intergenic |
| TGCTTTGAAACACCTGAAGT+TGG | 0.469556 | 4_4:-77249599 | Msa0704770:CDS |
| GAGCTTACCGCTACAACAAC+AGG | 0.470450 | 4_4:+77251224 | None:intergenic |
| TTGAGACGAAGCAACAGGTT+GGG | 0.473888 | 4_4:+77252209 | None:intergenic |
| CTGGGTTCCGTACATTCCTC+TGG | 0.477758 | 4_4:-77250687 | Msa0704770:CDS |
| CCATTCATAAACAGGTATTA+CGG | 0.479214 | 4_4:-77248054 | Msa0704770:CDS |
| TTGGGAATCTTCGGTATGCT+TGG | 0.479917 | 4_4:+77252239 | None:intergenic |
| TGAATCGAAGGCGCTAGATC+CGG | 0.485544 | 4_4:+77252364 | None:intergenic |
| GTTTACTGATAAACTTATTG+AGG | 0.486345 | 4_4:-77248775 | Msa0704770:CDS |
| TGGCCTCTTGTATGGAAAGA+AGG | 0.486407 | 4_4:-77251440 | Msa0704770:CDS |
| GGTCTTCTGTGAATTTGATT+GGG | 0.487595 | 4_4:-77249209 | Msa0704770:CDS |
| AACAGGTTGGGAATCAGGTT+GGG | 0.488198 | 4_4:+77252221 | None:intergenic |
| TGAAGCAAATGAAAATGGAC+TGG | 0.492057 | 4_4:-77250706 | Msa0704770:CDS |
| GCTCAACTGGTCATGCATCA+AGG | 0.495363 | 4_4:-77251269 | Msa0704770:CDS |
| TTTACTGATAAACTTATTGA+GGG | 0.500654 | 4_4:-77248774 | Msa0704770:CDS |
| ACCTGACACATCAGGTGCAT+CGG | 0.502548 | 4_4:+77248391 | None:intergenic |
| CTCAACTGGTCATGCATCAA+GGG | 0.504378 | 4_4:-77251268 | Msa0704770:CDS |
| CCTGACACATCAGGTGCATC+GGG | 0.504797 | 4_4:+77248392 | None:intergenic |
| TTAGGAACTTGTCAGGGAAG+TGG | 0.504827 | 4_4:-77245650 | Msa0704770:intron |
| GGTGCATCGGGAGATGGAAC+GGG | 0.505043 | 4_4:+77248404 | None:intergenic |
| CAACAGGTTGGGAATCAGGT+TGG | 0.510916 | 4_4:+77252220 | None:intergenic |
| TCTTGCGTTGCACCCAAAGA+AGG | 0.511738 | 4_4:-77250485 | Msa0704770:intron |
| TATATTTATATATAAAATCA+AGG | 0.514458 | 4_4:+77252429 | None:intergenic |
| ACCTTAACACCTGACACATC+AGG | 0.515689 | 4_4:+77248383 | None:intergenic |
| TTCCGCACTCATTTCAGCAA+TGG | 0.517076 | 4_4:+77248469 | None:intergenic |
| AAGTATTCAGGTTCGGATTG+GGG | 0.518136 | 4_4:+77252132 | None:intergenic |
| CCCGATGCACCTGATGTGTC+AGG | 0.518892 | 4_4:-77248392 | Msa0704770:CDS |
| GAGACTTCAGTCTATCAACT+TGG | 0.519749 | 4_4:+77250517 | None:intergenic |
| CTTGAGACGAAGCAACAGGT+TGG | 0.521578 | 4_4:+77252208 | None:intergenic |
| CGCTGCTCCAGAGGAATGTA+CGG | 0.522172 | 4_4:+77250680 | None:intergenic |
| ACATCAGGTGCATCGGGAGA+TGG | 0.546211 | 4_4:+77248398 | None:intergenic |
| AGGTGCATCGGGAGATGGAA+CGG | 0.548169 | 4_4:+77248403 | None:intergenic |
| TGGCTCGAAACATTCCCTGT+TGG | 0.567509 | 4_4:-77251748 | Msa0704770:CDS |
| CTTTCTTTAGGAACTTGTCA+GGG | 0.575135 | 4_4:-77245656 | Msa0704770:intron |
| GAAGCAAAGAAAGCCAATAG+AGG | 0.575705 | 4_4:-77245622 | None:intergenic |
| GATGCATACCGCTGCTCCAG+AGG | 0.579974 | 4_4:+77250671 | None:intergenic |
| TTTCAGAATGCATTCGAAGA+GGG | 0.581363 | 4_4:-77251463 | Msa0704770:intron |
| TTGGGAATTAGATGAACTTG+AGG | 0.587442 | 4_4:-77249191 | Msa0704770:intron |
| AAACCTTCTTTCCATACAAG+AGG | 0.588752 | 4_4:+77251437 | None:intergenic |
| TACTGATAAACTTATTGAGG+GGG | 0.590109 | 4_4:-77248772 | Msa0704770:CDS |
| TCTTGTAGGCAAGGGAAGCA+CGG | 0.590773 | 4_4:-77248499 | Msa0704770:intron |
| GAAGCAAATGAAAATGGACT+GGG | 0.591547 | 4_4:-77250705 | Msa0704770:CDS |
| ATATCCAGTTGAGCCAAAGC+CGG | 0.594956 | 4_4:-77249355 | Msa0704770:intron |
| CATAAACAGGTATTACGGAA+AGG | 0.597848 | 4_4:-77248049 | Msa0704770:CDS |
| AGATGAATTTGAACAAAGCA+CGG | 0.612836 | 4_4:-77249391 | Msa0704770:CDS |
| CGTACATTCCTCTGGAGCAG+CGG | 0.615658 | 4_4:-77250679 | Msa0704770:intron |
| CAGAATGCATTCGAAGAGGG+TGG | 0.615896 | 4_4:-77251460 | Msa0704770:CDS |
| CTTTCTTTAGGAATTTGTCA+GGG | 0.618977 | 4_4:-77248631 | Msa0704770:intron |
| AACATTCCCTGTTGGCACTG+AGG | 0.620526 | 4_4:-77251740 | Msa0704770:intron |
| TTACTGATAAACTTATTGAG+GGG | 0.626862 | 4_4:-77248773 | Msa0704770:CDS |
| GTATTACGGAAAGGCTCATG+AGG | 0.629234 | 4_4:-77248040 | Msa0704770:intron |
| AACACCATCACAATGAGGAA+AGG | 0.636181 | 4_4:-77252276 | Msa0704770:exon |
| AGCAAAGAAAGCCAATAGAG+AGG | 0.639340 | 4_4:-77248595 | Msa0704770:intron |
| GATTAACTCAGTTCAGAGAG+AGG | 0.642388 | 4_4:-77250747 | Msa0704770:CDS |
| CTGCATACCTGTTGTTGTAG+CGG | 0.645013 | 4_4:-77251231 | Msa0704770:intron |
| ATGCTGTGTATCAAATCAAG+TGG | 0.652338 | 4_4:-77251612 | Msa0704770:CDS |
| AACAAACCTCAGTGCCAACA+GGG | 0.653030 | 4_4:+77251734 | None:intergenic |
| TCAACTGGTCATGCATCAAG+GGG | 0.656478 | 4_4:-77251267 | Msa0704770:CDS |
| TTATATATAAAATCAAGGCG+TGG | 0.660704 | 4_4:+77252434 | None:intergenic |
| GTTTCAGAATGCATTCGAAG+AGG | 0.661105 | 4_4:-77251464 | Msa0704770:intron |
| AGCCATTGCTGAAATGAGTG+CGG | 0.676262 | 4_4:-77248471 | Msa0704770:CDS |
| ACGCAAACACCATCACAATG+AGG | 0.678492 | 4_4:-77252281 | Msa0704770:exon |
| TGAATTTGAACAAAGCACGG+AGG | 0.770299 | 4_4:-77249388 | Msa0704770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTATTTTTTTCATTAAATT+TGG | - | chr4_4:77246961-77246980 | Msa0704770:intron | 10.0% |
| !!! | AATTGTTTTAAATTTTTTAG+TGG | - | chr4_4:77247504-77247523 | Msa0704770:intron | 10.0% |
| !!! | AAATAATAATGATAGTTTTT+GGG | + | chr4_4:77247773-77247792 | None:intergenic | 10.0% |
| !!! | AAAATAATAATGATAGTTTT+TGG | + | chr4_4:77247774-77247793 | None:intergenic | 10.0% |
| !!! | AAATTTTAAATCATAATTAC+CGG | + | chr4_4:77248778-77248797 | None:intergenic | 10.0% |
| !!! | ATACATTTAATTTAATTTGA+AGG | + | chr4_4:77250401-77250420 | None:intergenic | 10.0% |
| !! | TTAATATTATTAAGGAGAAA+CGG | - | chr4_4:77246217-77246236 | Msa0704770:intron | 15.0% |
| !! | TTTCGTTTATATCATTAATT+AGG | - | chr4_4:77246256-77246275 | Msa0704770:intron | 15.0% |
| !!! | TTTTTTTTTTGTAATATCAG+TGG | - | chr4_4:77246466-77246485 | Msa0704770:intron | 15.0% |
| !!! | TTTTTTTTTGTAATATCAGT+GGG | - | chr4_4:77246467-77246486 | Msa0704770:intron | 15.0% |
| !! | AAAAAATACTGTAATTAGTT+TGG | + | chr4_4:77246951-77246970 | None:intergenic | 15.0% |
| !! | AATGAACTAATAAACAAATT+AGG | + | chr4_4:77247465-77247484 | None:intergenic | 15.0% |
| !!! | AATTTAAAACAATTTACCAA+AGG | + | chr4_4:77247498-77247517 | None:intergenic | 15.0% |
| !! | AACAACAAAAACTAAATAAA+CGG | + | chr4_4:77248385-77248404 | None:intergenic | 15.0% |
| !!! | TCATTTTTTTTTTGTTTGTT+TGG | - | chr4_4:77250513-77250532 | Msa0704770:CDS | 15.0% |
| !!! | ATTCGTGTTAATTTTGAATT+TGG | - | chr4_4:77246099-77246118 | Msa0704770:intron | 20.0% |
| !! | ATTACTAATGAATTTACCAA+AGG | + | chr4_4:77247532-77247551 | None:intergenic | 20.0% |
| !! | TTGAAGACATAAATTAAATG+AGG | + | chr4_4:77247565-77247584 | None:intergenic | 20.0% |
| !! | GTAAAAAATATACCTTCTTT+GGG | + | chr4_4:77247641-77247660 | None:intergenic | 20.0% |
| !! | AGTAAAAAATATACCTTCTT+TGG | + | chr4_4:77247642-77247661 | None:intergenic | 20.0% |
| !! | TTAAATTATTAAACATGCGT+TGG | - | chr4_4:77247717-77247736 | Msa0704770:intron | 20.0% |
| !!! | ATATGTTCAAATTTTGTATG+AGG | - | chr4_4:77248602-77248621 | Msa0704770:CDS | 20.0% |
| !! | CTAGGAAATATTTAATTATC+TGG | - | chr4_4:77249147-77249166 | Msa0704770:intron | 20.0% |
| !! | AATATTTAATTATCTGGTGT+AGG | - | chr4_4:77249153-77249172 | Msa0704770:intron | 20.0% |
| !! | CCATTATTAGTATATTTATC+TGG | + | chr4_4:77249275-77249294 | None:intergenic | 20.0% |
| !! | CCAGATAAATATACTAATAA+TGG | - | chr4_4:77249272-77249291 | Msa0704770:intron | 20.0% |
| !! | AATATACTAATAATGGTCAA+AGG | - | chr4_4:77249279-77249298 | Msa0704770:intron | 20.0% |
| !! | TTTACTGATAAACTTATTGA+GGG | - | chr4_4:77249337-77249356 | Msa0704770:intron | 20.0% |
| !! | AATAAACTCAATATCATCAT+CGG | + | chr4_4:77249943-77249962 | None:intergenic | 20.0% |
| !! | ATATATTATCAGTAAACTGT+AGG | + | chr4_4:77250018-77250037 | None:intergenic | 20.0% |
| !! | AACTTCATATAGAACAAATA+CGG | + | chr4_4:77250148-77250167 | None:intergenic | 20.0% |
| !! | ACATGATAAAGAAAATTTGA+TGG | + | chr4_4:77250193-77250212 | None:intergenic | 20.0% |
| !! | TTATCATGTAATTGTCTAAA+AGG | - | chr4_4:77250204-77250223 | Msa0704770:intron | 20.0% |
| !! | TATCATGTAATTGTCTAAAA+GGG | - | chr4_4:77250205-77250224 | Msa0704770:intron | 20.0% |
| !! | GGAAAAAATAATACTTTCAT+AGG | + | chr4_4:77250380-77250399 | None:intergenic | 20.0% |
| !! | ATTATACAGTTCAACTTTAA+TGG | - | chr4_4:77250813-77250832 | Msa0704770:intron | 20.0% |
| !! | TTATACAGTTCAACTTTAAT+GGG | - | chr4_4:77250814-77250833 | Msa0704770:intron | 20.0% |
| !!! | CATTTTGTTTAGTTTATAGA+AGG | + | chr4_4:77250880-77250899 | None:intergenic | 20.0% |
| !! | CTTCTATAAACTAAACAAAA+TGG | - | chr4_4:77250878-77250897 | Msa0704770:intron | 20.0% |
| !!! | TTATTTGATTCGTCAATTAT+AGG | - | chr4_4:77251779-77251798 | Msa0704770:intron | 20.0% |
| !!! | TATTTGATTCGTCAATTATA+GGG | - | chr4_4:77251780-77251799 | Msa0704770:intron | 20.0% |
| !! | AATTTCTAAATGATACTTAC+TGG | + | chr4_4:77251968-77251987 | None:intergenic | 20.0% |
| !! | TCATTTAGAAATTATCCAAT+AGG | - | chr4_4:77251975-77251994 | Msa0704770:intron | 20.0% |
| !! | TACGAAAAAATTCAGAAAAA+TGG | + | chr4_4:77252276-77252295 | None:intergenic | 20.0% |
| !! | ACAATGATTGTAAAAATAAC+AGG | + | chr4_4:77249086-77249105 | None:intergenic | 20.0% |
| !!! | TGTTATTTTTACAATCATTG+TGG | - | chr4_4:77249085-77249104 | Msa0704770:intron | 20.0% |
| !! | GGATATAACGCTTAATTTTT+GGG | + | chr4_4:77245659-77245678 | None:intergenic | 25.0% |
| !! | TGGATATAACGCTTAATTTT+TGG | + | chr4_4:77245660-77245679 | None:intergenic | 25.0% |
| ! | TTATATATAAAATCAAGGCG+TGG | + | chr4_4:77245680-77245699 | None:intergenic | 25.0% |
| ! | ACAATAGAGATATCTCATTT+AGG | + | chr4_4:77246309-77246328 | None:intergenic | 25.0% |
| ! | TAAGATAAATATGACCAGAT+CGG | + | chr4_4:77246790-77246809 | None:intergenic | 25.0% |
| !!! | ACCAAAACTATTTTTCCTTT+GGG | + | chr4_4:77247068-77247087 | None:intergenic | 25.0% |
| !!! | AACCAAAACTATTTTTCCTT+TGG | + | chr4_4:77247069-77247088 | None:intergenic | 25.0% |
| ! | ATCTTAACAACTAAGCATTT+AGG | + | chr4_4:77247191-77247210 | None:intergenic | 25.0% |
| !! | AGATATCAGTTTTACTTACT+TGG | - | chr4_4:77247220-77247239 | Msa0704770:intron | 25.0% |
| !! | TTAATCCCAATTTTATCAGA+TGG | + | chr4_4:77247350-77247369 | None:intergenic | 25.0% |
| !!! | AAATTTTTTAGTGGTTCCTT+TGG | - | chr4_4:77247513-77247532 | Msa0704770:intron | 25.0% |
| ! | ACTAACATTATTGACAGTAA+AGG | + | chr4_4:77247665-77247684 | None:intergenic | 25.0% |
| ! | ATGCATAATAATACATGTGT+TGG | - | chr4_4:77247855-77247874 | Msa0704770:intron | 25.0% |
| ! | TGCATAATAATACATGTGTT+GGG | - | chr4_4:77247856-77247875 | Msa0704770:intron | 25.0% |
| !! | TCATTTTAAATAAATGAGCG+TGG | - | chr4_4:77248209-77248228 | Msa0704770:intron | 25.0% |
| !! | CTATATACTTTTACAATTGC+TGG | + | chr4_4:77248319-77248338 | None:intergenic | 25.0% |
| ! | AAAGTATATAGCCACTTATT+TGG | - | chr4_4:77248328-77248347 | Msa0704770:intron | 25.0% |
| ! | TCACATATTATAACAAGGTT+AGG | + | chr4_4:77248484-77248503 | None:intergenic | 25.0% |
| ! | CTGTATCACATATTATAACA+AGG | + | chr4_4:77248489-77248508 | None:intergenic | 25.0% |
| !! | CTTGTTATAATATGTGATAC+AGG | - | chr4_4:77248487-77248506 | Msa0704770:CDS | 25.0% |
| ! | TCAAATTCATCTTCCTTAAA+TGG | + | chr4_4:77248712-77248731 | None:intergenic | 25.0% |
| !!! | GGATATTTTTTCTTACAGTA+CGG | - | chr4_4:77248831-77248850 | Msa0704770:intron | 25.0% |
| !!! | GATATTTTTTCTTACAGTAC+GGG | - | chr4_4:77248832-77248851 | Msa0704770:intron | 25.0% |
| ! | GTGACAAAGAAAACAAAATA+TGG | + | chr4_4:77248863-77248882 | None:intergenic | 25.0% |
| ! | TTTCTAAACTGTAACATATC+AGG | + | chr4_4:77248979-77248998 | None:intergenic | 25.0% |
| ! | AGAAAAATGGCTATTATAAG+CGG | + | chr4_4:77249023-77249042 | None:intergenic | 25.0% |
| ! | TACTAGAGATTGTTAAAGTT+AGG | - | chr4_4:77249244-77249263 | Msa0704770:intron | 25.0% |
| ! | ACTAGAGATTGTTAAAGTTA+GGG | - | chr4_4:77249245-77249264 | Msa0704770:intron | 25.0% |
| ! | GTTTACTGATAAACTTATTG+AGG | - | chr4_4:77249336-77249355 | Msa0704770:intron | 25.0% |
| ! | TTACTGATAAACTTATTGAG+GGG | - | chr4_4:77249338-77249357 | Msa0704770:intron | 25.0% |
| ! | AATATCTTTACTTACCTTGA+AGG | + | chr4_4:77249392-77249411 | None:intergenic | 25.0% |
| ! | AGAGATGATTGTAAATAGTT+AGG | - | chr4_4:77249811-77249830 | Msa0704770:intron | 25.0% |
| !!! | AACTTTAAGACATAAGTTGA+GGG | + | chr4_4:77249886-77249905 | None:intergenic | 25.0% |
| !!! | AAACTTTAAGACATAAGTTG+AGG | + | chr4_4:77249887-77249906 | None:intergenic | 25.0% |
| ! | TTATGTCTTAAAGTTTGAGA+TGG | - | chr4_4:77249891-77249910 | Msa0704770:intron | 25.0% |
| ! | ACATAATCAACAGAAATTCA+GGG | + | chr4_4:77249975-77249994 | None:intergenic | 25.0% |
| ! | AACATAATCAACAGAAATTC+AGG | + | chr4_4:77249976-77249995 | None:intergenic | 25.0% |
| ! | ACTTCATATAGAACAAATAC+GGG | + | chr4_4:77250147-77250166 | None:intergenic | 25.0% |
| !! | CTCAGAAATTCTCTAAAAAA+TGG | + | chr4_4:77250312-77250331 | None:intergenic | 25.0% |
| !!! | TTGAATTCTCTTTGTTTTGA+TGG | + | chr4_4:77251051-77251070 | None:intergenic | 25.0% |
| ! | AACAAAAGAACCTAAATTGT+AGG | + | chr4_4:77251147-77251166 | None:intergenic | 25.0% |
| ! | ATTGGTTGATTGTACATATA+TGG | - | chr4_4:77251267-77251286 | Msa0704770:CDS | 25.0% |
| ! | TTGGTTGATTGTACATATAT+GGG | - | chr4_4:77251268-77251287 | Msa0704770:CDS | 25.0% |
| !!! | ATTTTATTAACTTGATCCAG+TGG | + | chr4_4:77251706-77251725 | None:intergenic | 25.0% |
| ! | GAATACATAGTTCAATAAAG+TGG | - | chr4_4:77251728-77251747 | Msa0704770:intron | 25.0% |
| ! | TGACGAATCAAATAATACTA+TGG | + | chr4_4:77251774-77251793 | None:intergenic | 25.0% |
| ! | TCAAATTCATCTTCCTTAAA+TGG | + | chr4_4:77248712-77248731 | None:intergenic | 25.0% |
| !!! | TTGACATTCTTTGAGTTTTT+TGG | - | chr4_4:77251999-77252018 | Msa0704770:intron | 25.0% |
| !!! | TGACATTCTTTGAGTTTTTT+GGG | - | chr4_4:77252000-77252019 | Msa0704770:intron | 25.0% |
| !!! | ATTTTTTCGTATTATTCTGC+AGG | - | chr4_4:77252285-77252304 | Msa0704770:exon | 25.0% |
| ! | TTACTTATCTTATGTCTAAC+AGG | + | chr4_4:77252375-77252394 | None:intergenic | 25.0% |
| ! | CATAAGATAAGTAACAAGTT+AGG | - | chr4_4:77252381-77252400 | Msa0704770:five_prime_UTR | 25.0% |
| ! | GAAAGAAAGAAAGAAAGAAA+GGG | + | chr4_4:77252412-77252431 | None:intergenic | 25.0% |
| ! | AGAAAGAAAGAAAGAAAGAA+AGG | + | chr4_4:77252413-77252432 | None:intergenic | 25.0% |
| ! | CTTTCTTTCTTTCTTTCTTT+AGG | - | chr4_4:77252411-77252430 | Msa0704770:five_prime_UTR | 25.0% |
| !! | TCTTCTTATCGATTTGAATC+CGG | - | chr4_4:77245728-77245747 | Msa0704770:intron | 30.0% |
| !!! | AAAAAGATAGGGTTTTGAAG+GGG | + | chr4_4:77245773-77245792 | None:intergenic | 30.0% |
| !!! | GAAAAAGATAGGGTTTTGAA+GGG | + | chr4_4:77245774-77245793 | None:intergenic | 30.0% |
| !! | AGAAAAAGATAGGGTTTTGA+AGG | + | chr4_4:77245775-77245794 | None:intergenic | 30.0% |
| GAGAGAGAAAGAAAAAGATA+GGG | + | chr4_4:77245784-77245803 | None:intergenic | 30.0% | |
| AGAGAGAGAAAGAAAAAGAT+AGG | + | chr4_4:77245785-77245804 | None:intergenic | 30.0% | |
| !!! | GTTGTTGATTTCAATTTTGC+AGG | - | chr4_4:77246332-77246351 | Msa0704770:intron | 30.0% |
| TAACCTAGAAGTGAGTATTA+AGG | - | chr4_4:77246530-77246549 | Msa0704770:intron | 30.0% | |
| AAGATAAATATGACCAGATC+GGG | + | chr4_4:77246789-77246808 | None:intergenic | 30.0% | |
| TTTAAGCTTCCAATTATGCA+TGG | - | chr4_4:77246988-77247007 | Msa0704770:intron | 30.0% | |
| ATATTTGGACCATGCATAAT+TGG | + | chr4_4:77247000-77247019 | None:intergenic | 30.0% | |
| !! | AAACTATTTTTCCTTTGGGT+GGG | + | chr4_4:77247064-77247083 | None:intergenic | 30.0% |
| !! | AAAACTATTTTTCCTTTGGG+TGG | + | chr4_4:77247065-77247084 | None:intergenic | 30.0% |
| ! | ACCCAAAGGAAAAATAGTTT+TGG | - | chr4_4:77247064-77247083 | Msa0704770:intron | 30.0% |
| !!! | ATTTTATCAGATGGTGGAAA+AGG | + | chr4_4:77247341-77247360 | None:intergenic | 30.0% |
| TTTCCACCATCTGATAAAAT+TGG | - | chr4_4:77247341-77247360 | Msa0704770:intron | 30.0% | |
| TTCCACCATCTGATAAAATT+GGG | - | chr4_4:77247342-77247361 | Msa0704770:intron | 30.0% | |
| TCCTATGAAGCAAATGAAAA+TGG | - | chr4_4:77247400-77247419 | Msa0704770:intron | 30.0% | |
| ! | TCCATTTTCATTTGCTTCAT+AGG | + | chr4_4:77247404-77247423 | None:intergenic | 30.0% |
| !!! | TTCATTTTTAGCTGTTCCTT+TGG | - | chr4_4:77247479-77247498 | Msa0704770:intron | 30.0% |
| !!! | TAATGATAGTTTTTGGGTAC+AGG | + | chr4_4:77247767-77247786 | None:intergenic | 30.0% |
| TATCATCATAGCAGTATTTC+AGG | + | chr4_4:77247819-77247838 | None:intergenic | 30.0% | |
| TGAAATACTGCTATGATGAT+AGG | - | chr4_4:77247818-77247837 | Msa0704770:intron | 30.0% | |
| ACTTGACTACATATAAGTGA+TGG | + | chr4_4:77247916-77247935 | None:intergenic | 30.0% | |
| CTTTCATCTGTATATCTCTA+AGG | - | chr4_4:77247942-77247961 | Msa0704770:intron | 30.0% | |
| TGAATTGAAACCATGGTAAA+TGG | + | chr4_4:77248094-77248113 | None:intergenic | 30.0% | |
| AACTGCAAATACCAAATAAG+TGG | + | chr4_4:77248342-77248361 | None:intergenic | 30.0% | |
| !! | TTCACAAATTTGCTACATCA+AGG | + | chr4_4:77248450-77248469 | None:intergenic | 30.0% |
| TCTTTAATCTATCCAACTTC+AGG | + | chr4_4:77248527-77248546 | None:intergenic | 30.0% | |
| AGATTTCTATCAGCCATTTA+AGG | - | chr4_4:77248696-77248715 | Msa0704770:intron | 30.0% | |
| AGATGAATTTGAACAAAGCA+CGG | - | chr4_4:77248720-77248739 | Msa0704770:intron | 30.0% | |
| !! | TAAATCATAATTACCGGCTT+TGG | + | chr4_4:77248772-77248791 | None:intergenic | 30.0% |
| TAAACTGTAACATATCAGGA+AGG | + | chr4_4:77248975-77248994 | None:intergenic | 30.0% | |
| !!! | ATAGCCATTTTTCTGAATCT+TGG | - | chr4_4:77249029-77249048 | Msa0704770:intron | 30.0% |
| AACACCAAGATTCAGAAAAA+TGG | + | chr4_4:77249036-77249055 | None:intergenic | 30.0% | |
| TTAATTATCTGGTGTAGGAA+TGG | - | chr4_4:77249158-77249177 | Msa0704770:intron | 30.0% | |
| CTTTAACAATCTCTAGTAGA+AGG | + | chr4_4:77249242-77249261 | None:intergenic | 30.0% | |
| CTAGAGATTGTTAAAGTTAG+GGG | - | chr4_4:77249246-77249265 | Msa0704770:intron | 30.0% | |
| TTGTTTGTTTAATATCCTGC+AGG | - | chr4_4:77249312-77249331 | Msa0704770:intron | 30.0% | |
| TACTGATAAACTTATTGAGG+GGG | - | chr4_4:77249339-77249358 | Msa0704770:intron | 30.0% | |
| !! | TGACTTTGAAGTAACAAGTT+AGG | - | chr4_4:77249438-77249457 | Msa0704770:intron | 30.0% |
| CTCTCTTTCTTTCTTTCTTT+AGG | - | chr4_4:77249468-77249487 | Msa0704770:intron | 30.0% | |
| ! | TCTTTCTTTAGGAATTTGTC+AGG | - | chr4_4:77249479-77249498 | Msa0704770:intron | 30.0% |
| ! | CTTTCTTTAGGAATTTGTCA+GGG | - | chr4_4:77249480-77249499 | Msa0704770:intron | 30.0% |
| AAGGTTAAAAAAGCAGAAAG+CGG | + | chr4_4:77249585-77249604 | None:intergenic | 30.0% | |
| ! | TAACCTTCTTTTTCTCTTGT+AGG | - | chr4_4:77249598-77249617 | Msa0704770:CDS | 30.0% |
| TTCTTCTACCAAAAAGGAAA+AGG | + | chr4_4:77249779-77249798 | None:intergenic | 30.0% | |
| GTGAATTTCTTCTACCAAAA+AGG | + | chr4_4:77249785-77249804 | None:intergenic | 30.0% | |
| CCATTCATAAACAGGTATTA+CGG | - | chr4_4:77250057-77250076 | Msa0704770:intron | 30.0% | |
| GAAAATTGCAATTGTTGTCT+TGG | + | chr4_4:77250111-77250130 | None:intergenic | 30.0% | |
| TGTTCTATATGAAGTTTACC+CGG | - | chr4_4:77250152-77250171 | Msa0704770:intron | 30.0% | |
| AAATCCTAGATAAGTGAAGT+AGG | - | chr4_4:77250254-77250273 | Msa0704770:intron | 30.0% | |
| !!! | ATTTTTTTGTAGCTTCCATC+AGG | + | chr4_4:77250562-77250581 | None:intergenic | 30.0% |
| ! | AGTCAATCTGTACTATGTTT+TGG | - | chr4_4:77250714-77250733 | Msa0704770:CDS | 30.0% |
| AATTAAATTTACGCATCACG+AGG | - | chr4_4:77250774-77250793 | Msa0704770:CDS | 30.0% | |
| !!! | AGCAAAATTGTTTTGAACAC+CGG | - | chr4_4:77250918-77250937 | Msa0704770:intron | 30.0% |
| TTGGCAATTATCAATGTCAT+GGG | - | chr4_4:77251008-77251027 | Msa0704770:intron | 30.0% | |
| ! | TATTCCAGTAGTTTGTATAC+TGG | - | chr4_4:77251083-77251102 | Msa0704770:intron | 30.0% |
| GAATGTTTGTCCTACAATTT+AGG | - | chr4_4:77251134-77251153 | Msa0704770:intron | 30.0% | |
| AAAGAATGAGAGCTCTATAT+TGG | - | chr4_4:77251249-77251268 | Msa0704770:CDS | 30.0% | |
| TTGTACATATATGGGTGAAT+CGG | - | chr4_4:77251276-77251295 | Msa0704770:intron | 30.0% | |
| TGATCCTATGTCAAACAAAA+GGG | + | chr4_4:77251305-77251324 | None:intergenic | 30.0% | |
| ATGATCCTATGTCAAACAAA+AGG | + | chr4_4:77251306-77251325 | None:intergenic | 30.0% | |
| TTCATATGACTATATCAGCT+TGG | - | chr4_4:77251330-77251349 | Msa0704770:intron | 30.0% | |
| TTACATTTATAGTCGAGTTC+TGG | - | chr4_4:77251367-77251386 | Msa0704770:intron | 30.0% | |
| TTAAATGTTACTCCAAACAG+AGG | + | chr4_4:77251450-77251469 | None:intergenic | 30.0% | |
| AAGCAATACTATCCAACTTA+AGG | + | chr4_4:77251618-77251637 | None:intergenic | 30.0% | |
| CTAAACCCAGAAAACTTATA+GGG | + | chr4_4:77251642-77251661 | None:intergenic | 30.0% | |
| TCTAAACCCAGAAAACTTAT+AGG | + | chr4_4:77251643-77251662 | None:intergenic | 30.0% | |
| GTTCAATAAAGTGGTTATGA+TGG | - | chr4_4:77251737-77251756 | Msa0704770:intron | 30.0% | |
| ! | ATTATAGGGAATTTTGTACG+AGG | - | chr4_4:77251794-77251813 | Msa0704770:intron | 30.0% |
| AATAAAAACATTGACCGATG+AGG | + | chr4_4:77251827-77251846 | None:intergenic | 30.0% | |
| ! | AGTTTTCTATCAGCCATTTA+AGG | - | chr4_4:77251886-77251905 | Msa0704770:intron | 30.0% |
| !! | TAAATGATACTTACTGGCTT+TGG | + | chr4_4:77251962-77251981 | None:intergenic | 30.0% |
| TCAAAGAATGTCAATCCTAT+TGG | + | chr4_4:77251993-77252012 | None:intergenic | 30.0% | |
| ATTTACATAACCATGCTGTA+CGG | + | chr4_4:77252034-77252053 | None:intergenic | 30.0% | |
| CACATAGAGAAAATCAAATC+TGG | + | chr4_4:77252116-77252135 | None:intergenic | 30.0% | |
| TCTCGTAAAAACAACGCTAT+CGG | + | chr4_4:77245628-77245647 | None:intergenic | 35.0% | |
| GACACGCTCTTACATTTAAA+AGG | + | chr4_4:77245708-77245727 | None:intergenic | 35.0% | |
| ! | ATCTTCGAAGTATTCAGGTT+CGG | + | chr4_4:77245989-77246008 | None:intergenic | 35.0% |
| CTTCGAAGATAAGCGTAATT+TGG | - | chr4_4:77245999-77246018 | Msa0704770:intron | 35.0% | |
| CTTCAGCATTAAAAGCTACA+CGG | + | chr4_4:77246151-77246170 | None:intergenic | 35.0% | |
| ! | CAATTTTGCAGGAAGATTTG+TGG | - | chr4_4:77246343-77246362 | Msa0704770:intron | 35.0% |
| TTTGATACACAGCATCCAAT+TGG | + | chr4_4:77246494-77246513 | None:intergenic | 35.0% | |
| ATGCTGTGTATCAAATCAAG+TGG | - | chr4_4:77246499-77246518 | Msa0704770:intron | 35.0% | |
| GTCATCAACGAAAATCTAAG+CGG | + | chr4_4:77246556-77246575 | None:intergenic | 35.0% | |
| TTTCAGAATGCATTCGAAGA+GGG | - | chr4_4:77246648-77246667 | Msa0704770:intron | 35.0% | |
| AAACCTTCTTTCCATACAAG+AGG | + | chr4_4:77246677-77246696 | None:intergenic | 35.0% | |
| GGAAAGAAGGTTTACCTATT+TGG | - | chr4_4:77246684-77246703 | Msa0704770:intron | 35.0% | |
| AACCATAAACTACTTACGCT+CGG | + | chr4_4:77246715-77246734 | None:intergenic | 35.0% | |
| AGATAAATATGACCAGATCG+GGG | + | chr4_4:77246788-77246807 | None:intergenic | 35.0% | |
| GTGATCAGAGGAAACATATT+TGG | + | chr4_4:77247015-77247034 | None:intergenic | 35.0% | |
| !! | AACTATTTTTCCTTTGGGTG+GGG | + | chr4_4:77247063-77247082 | None:intergenic | 35.0% |
| GTTTGTATTTATCTCCTTGC+CGG | - | chr4_4:77247131-77247150 | Msa0704770:intron | 35.0% | |
| AAGTCTACACCAGATAAACA+AGG | + | chr4_4:77247158-77247177 | None:intergenic | 35.0% | |
| TTGTTTATCTGGTGTAGACT+TGG | - | chr4_4:77247157-77247176 | Msa0704770:intron | 35.0% | |
| ATCAGCTCATCAAAGTTGAA+AGG | + | chr4_4:77247254-77247273 | None:intergenic | 35.0% | |
| TTTCAACTCCTTTCTGTAAC+AGG | - | chr4_4:77247307-77247326 | Msa0704770:intron | 35.0% | |
| TGATACAACCTGTTACAGAA+AGG | + | chr4_4:77247318-77247337 | None:intergenic | 35.0% | |
| ! | ATCCCAATTTTATCAGATGG+TGG | + | chr4_4:77247347-77247366 | None:intergenic | 35.0% |
| TGAAGCAAATGAAAATGGAC+TGG | - | chr4_4:77247405-77247424 | Msa0704770:intron | 35.0% | |
| ! | GAAGCAAATGAAAATGGACT+GGG | - | chr4_4:77247406-77247425 | Msa0704770:intron | 35.0% |
| TACTGCTATGATGATAGGTA+TGG | - | chr4_4:77247823-77247842 | Msa0704770:intron | 35.0% | |
| GAAAAGTGAAAATGCCTCTT+AGG | + | chr4_4:77247981-77248000 | None:intergenic | 35.0% | |
| CGTACTGGAGAGTAAAAATA+GGG | + | chr4_4:77248018-77248037 | None:intergenic | 35.0% | |
| !! | GAAAGCATTTCCATTTACCA+TGG | - | chr4_4:77248081-77248100 | Msa0704770:intron | 35.0% |
| TGCATCATGAATTGAAACCA+TGG | + | chr4_4:77248101-77248120 | None:intergenic | 35.0% | |
| GTTTCCTTCAGAGTAACATT+TGG | - | chr4_4:77248171-77248190 | Msa0704770:intron | 35.0% | |
| ACTTCCAAATGTTACTCTGA+AGG | + | chr4_4:77248178-77248197 | None:intergenic | 35.0% | |
| TTCAGAGTAACATTTGGAAG+TGG | - | chr4_4:77248177-77248196 | Msa0704770:intron | 35.0% | |
| ACATTTGGAAGTGGAACATA+TGG | - | chr4_4:77248186-77248205 | Msa0704770:intron | 35.0% | |
| !!! | TTTTTGTTGTTAGCATGCAC+AGG | - | chr4_4:77248394-77248413 | Msa0704770:CDS | 35.0% |
| CTAAAGCCCAAAAACTTACA+GGG | + | chr4_4:77248567-77248586 | None:intergenic | 35.0% | |
| ! | TCTAAAGCCCAAAAACTTAC+AGG | + | chr4_4:77248568-77248587 | None:intergenic | 35.0% |
| ! | AAATTTTGTATGAGGCATGC+TGG | - | chr4_4:77248610-77248629 | Msa0704770:CDS | 35.0% |
| AAATGGCTGATAGAAATCTG+TGG | + | chr4_4:77248695-77248714 | None:intergenic | 35.0% | |
| GGCTCAACTGGATATATTAT+CGG | + | chr4_4:77248751-77248770 | None:intergenic | 35.0% | |
| CCAAAGACTATCAATCGTAA+CGG | + | chr4_4:77248803-77248822 | None:intergenic | 35.0% | |
| ! | CGTTACGATTGATAGTCTTT+GGG | - | chr4_4:77248801-77248820 | Msa0704770:intron | 35.0% |
| !! | TTGATAGTCTTTGGGTTGTT+TGG | - | chr4_4:77248809-77248828 | Msa0704770:intron | 35.0% |
| !! | TGATAGTCTTTGGGTTGTTT+GGG | - | chr4_4:77248810-77248829 | Msa0704770:intron | 35.0% |
| AGGTCTTCTGTGAATTTGAT+TGG | - | chr4_4:77248901-77248920 | Msa0704770:intron | 35.0% | |
| GGTCTTCTGTGAATTTGATT+GGG | - | chr4_4:77248902-77248921 | Msa0704770:intron | 35.0% | |
| TTGGGAATTAGATGAACTTG+AGG | - | chr4_4:77248920-77248939 | Msa0704770:intron | 35.0% | |
| TATCAGGAAGGTTTAACAAC+AGG | + | chr4_4:77248963-77248982 | None:intergenic | 35.0% | |
| TTGCTATGTTACTGAGTTCT+AGG | - | chr4_4:77249129-77249148 | Msa0704770:intron | 35.0% | |
| !!! | TTACCTTGAAGGCATCTTTT+TGG | + | chr4_4:77249381-77249400 | None:intergenic | 35.0% |
| TTAGGAATTTGTCAGGGAAA+AGG | - | chr4_4:77249486-77249505 | Msa0704770:intron | 35.0% | |
| AATTTGTCAGGGAAAAGGTT+CGG | - | chr4_4:77249491-77249510 | Msa0704770:intron | 35.0% | |
| !! | CTTTTGGTGATTTGTGATCT+TGG | - | chr4_4:77249541-77249560 | Msa0704770:intron | 35.0% |
| TTGCCTACAAGAGAAAAAGA+AGG | + | chr4_4:77249604-77249623 | None:intergenic | 35.0% | |
| !! | AGGTGTTAAGGTTGGTATTT+GGG | - | chr4_4:77249739-77249758 | Msa0704770:intron | 35.0% |
| ! | AACTGTGACCTTTTCCTTTT+TGG | - | chr4_4:77249768-77249787 | Msa0704770:intron | 35.0% |
| CCGTAATACCTGTTTATGAA+TGG | + | chr4_4:77250060-77250079 | None:intergenic | 35.0% | |
| CATAAACAGGTATTACGGAA+AGG | - | chr4_4:77250062-77250081 | Msa0704770:intron | 35.0% | |
| ! | GACAACAATTGCAATTTTCC+TGG | - | chr4_4:77250112-77250131 | Msa0704770:intron | 35.0% |
| AGTTTATAGAAGGCCTAAGT+CGG | + | chr4_4:77250870-77250889 | None:intergenic | 35.0% | |
| TACCAATGCATGATGTTACT+TGG | - | chr4_4:77250989-77251008 | Msa0704770:intron | 35.0% | |
| CTTGGCAATTATCAATGTCA+TGG | - | chr4_4:77251007-77251026 | Msa0704770:intron | 35.0% | |
| GAATATTTCTCCAACCAGTT+AGG | - | chr4_4:77251176-77251195 | Msa0704770:intron | 35.0% | |
| ATACTAGCAGAAATCCTAAC+TGG | + | chr4_4:77251193-77251212 | None:intergenic | 35.0% | |
| TGTACATATATGGGTGAATC+GGG | - | chr4_4:77251277-77251296 | Msa0704770:intron | 35.0% | |
| ATCCTATGTCAAACAAAAGG+GGG | + | chr4_4:77251303-77251322 | None:intergenic | 35.0% | |
| GATCCTATGTCAAACAAAAG+GGG | + | chr4_4:77251304-77251323 | None:intergenic | 35.0% | |
| TGTTGTCATTAGACAGTTAC+AGG | - | chr4_4:77251578-77251597 | Msa0704770:intron | 35.0% | |
| !! | TGCTTTGAAACACCTTAAGT+TGG | - | chr4_4:77251603-77251622 | Msa0704770:CDS | 35.0% |
| GGCTCAACTGGATATATTAT+TGG | + | chr4_4:77248751-77248770 | None:intergenic | 35.0% | |
| TCTTGTTGACAAGGGTTATT+TGG | + | chr4_4:77252072-77252091 | None:intergenic | 35.0% | |
| AATAACCCTTGTCAACAAGA+TGG | - | chr4_4:77252072-77252091 | Msa0704770:intron | 35.0% | |
| ! | ATGTATGTATTGCTTGTTGC+AGG | - | chr4_4:77252140-77252159 | Msa0704770:CDS | 35.0% |
| CTGTGAATTTGATGAACTTG+AGG | - | chr4_4:77252167-77252186 | Msa0704770:CDS | 35.0% | |
| GAGGTAATGAACTCACTTTA+TGG | - | chr4_4:77252186-77252205 | Msa0704770:CDS | 35.0% | |
| CTTATCTTATGTCTAACAGG+AGG | + | chr4_4:77252372-77252391 | None:intergenic | 35.0% | |
| ! | TCTTTCTTTAGGAACTTGTC+AGG | - | chr4_4:77252454-77252473 | Msa0704770:five_prime_UTR | 35.0% |
| ! | CTTTCTTTAGGAACTTGTCA+GGG | - | chr4_4:77252455-77252474 | Msa0704770:five_prime_UTR | 35.0% |
| ATGGTGTTTGCGTTCGAATT+CGG | + | chr4_4:77245823-77245842 | None:intergenic | 40.0% | |
| AACACCATCACAATGAGGAA+AGG | - | chr4_4:77245835-77245854 | Msa0704770:intron | 40.0% | |
| ! | TTTTCTTGAGACGAAGCAAC+AGG | + | chr4_4:77245910-77245929 | None:intergenic | 40.0% |
| !!! | GTTTTGAGGCGTTTAGCTTT+AGG | + | chr4_4:77245952-77245971 | None:intergenic | 40.0% |
| ! | ATTGGGGTTTAGAGGTTTTG+AGG | + | chr4_4:77245966-77245985 | None:intergenic | 40.0% |
| ! | AAGTATTCAGGTTCGGATTG+GGG | + | chr4_4:77245982-77246001 | None:intergenic | 40.0% |
| ! | GAAGTATTCAGGTTCGGATT+GGG | + | chr4_4:77245983-77246002 | None:intergenic | 40.0% |
| ! | CGCTTATCTTCGAAGTATTC+AGG | + | chr4_4:77245994-77246013 | None:intergenic | 40.0% |
| GTAATATCAGTGGGACCAAT+TGG | - | chr4_4:77246476-77246495 | Msa0704770:intron | 40.0% | |
| GTTTCAGAATGCATTCGAAG+AGG | - | chr4_4:77246647-77246666 | Msa0704770:intron | 40.0% | |
| ! | GGTTTCATCATTTTGCGAGT+TGG | - | chr4_4:77246731-77246750 | Msa0704770:intron | 40.0% |
| ATAAATATGACCAGATCGGG+GGG | + | chr4_4:77246786-77246805 | None:intergenic | 40.0% | |
| GATAAATATGACCAGATCGG+GGG | + | chr4_4:77246787-77246806 | None:intergenic | 40.0% | |
| CATTGCTTGATCCACTAAAC+TGG | - | chr4_4:77247037-77247056 | Msa0704770:intron | 40.0% | |
| TACACCAGATAAACAAGGTC+CGG | + | chr4_4:77247153-77247172 | None:intergenic | 40.0% | |
| GATTAACTCAGTTCAGAGAG+AGG | - | chr4_4:77247364-77247383 | Msa0704770:intron | 40.0% | |
| GAGACTTCAGTCTATCAACT+TGG | + | chr4_4:77247597-77247616 | None:intergenic | 40.0% | |
| !!! | TGATAGTTTTTGGGTACAGG+CGG | + | chr4_4:77247764-77247783 | None:intergenic | 40.0% |
| GAAAACCTGTTCTTCCTAAG+AGG | - | chr4_4:77247964-77247983 | Msa0704770:intron | 40.0% | |
| AAATGCCTCTTAGGAAGAAC+AGG | + | chr4_4:77247972-77247991 | None:intergenic | 40.0% | |
| GCGTACTGGAGAGTAAAAAT+AGG | + | chr4_4:77248019-77248038 | None:intergenic | 40.0% | |
| GCTATTTAACAAGTGCGTAC+TGG | + | chr4_4:77248033-77248052 | None:intergenic | 40.0% | |
| TTTGCTACATCAAGGACAAC+AGG | + | chr4_4:77248442-77248461 | None:intergenic | 40.0% | |
| !! | TGCTTTGAAACACCTGAAGT+TGG | - | chr4_4:77248512-77248531 | Msa0704770:intron | 40.0% |
| ! | TGCTTGCCCTGTAAGTTTTT+GGG | - | chr4_4:77248558-77248577 | Msa0704770:intron | 40.0% |
| !! | GGCTTTAGAATGTTACTCAC+AGG | - | chr4_4:77248579-77248598 | Msa0704770:intron | 40.0% |
| TGAATTTGAACAAAGCACGG+AGG | - | chr4_4:77248723-77248742 | Msa0704770:intron | 40.0% | |
| ! | CCGTTACGATTGATAGTCTT+TGG | - | chr4_4:77248800-77248819 | Msa0704770:intron | 40.0% |
| ! | ACTTATGCATTGCTTGTTGC+AGG | - | chr4_4:77248881-77248900 | Msa0704770:intron | 40.0% |
| TGGCTATTATAAGCGGTAGA+AGG | + | chr4_4:77249016-77249035 | None:intergenic | 40.0% | |
| !! | GAATCTTGGTGTTATTCTGC+AGG | - | chr4_4:77249043-77249062 | Msa0704770:intron | 40.0% |
| GAACTCAGTAACATAGCAAC+AGG | + | chr4_4:77249128-77249147 | None:intergenic | 40.0% | |
| CTAGTAGAAGGACATGTAAG+AGG | + | chr4_4:77249230-77249249 | None:intergenic | 40.0% | |
| GTTTATCAGTAAACTCCTGC+AGG | + | chr4_4:77249330-77249349 | None:intergenic | 40.0% | |
| AGACCAAAAAGATGCCTTCA+AGG | - | chr4_4:77249375-77249394 | Msa0704770:CDS | 40.0% | |
| ATTTGTCAGGGAAAAGGTTC+GGG | - | chr4_4:77249492-77249511 | Msa0704770:intron | 40.0% | |
| AGCAAAGAAAGCCAATAGAG+AGG | - | chr4_4:77249516-77249535 | Msa0704770:intron | 40.0% | |
| !!! | AGCCAATAGAGAGGTACTTT+TGG | - | chr4_4:77249525-77249544 | Msa0704770:intron | 40.0% |
| !! | CACCAAAAGTACCTCTCTAT+TGG | + | chr4_4:77249530-77249549 | None:intergenic | 40.0% |
| !! | CAGGTGTTAAGGTTGGTATT+TGG | - | chr4_4:77249738-77249757 | Msa0704770:intron | 40.0% |
| AGATGGACATATCCATATCC+AGG | - | chr4_4:77249908-77249927 | Msa0704770:intron | 40.0% | |
| GATGGACATATCCATATCCA+GGG | - | chr4_4:77249909-77249928 | Msa0704770:intron | 40.0% | |
| TGCAGTCTCCATTCATAAAC+AGG | - | chr4_4:77250049-77250068 | Msa0704770:intron | 40.0% | |
| ! | AAATTTGATGGAGCACCAAG+AGG | + | chr4_4:77250181-77250200 | None:intergenic | 40.0% |
| TCCTAGATAAGTGAAGTAGG+TGG | - | chr4_4:77250257-77250276 | Msa0704770:intron | 40.0% | |
| ACCACCTACTTCACTTATCT+AGG | + | chr4_4:77250261-77250280 | None:intergenic | 40.0% | |
| GGATAATTGAGACGTGTTTC+TGG | - | chr4_4:77250283-77250302 | Msa0704770:intron | 40.0% | |
| ATCAATTGTCCTCTTCCTGA+TGG | - | chr4_4:77250544-77250563 | Msa0704770:intron | 40.0% | |
| GTTTGACAAAGACCAGAACA+GGG | + | chr4_4:77250661-77250680 | None:intergenic | 40.0% | |
| TGTTTGACAAAGACCAGAAC+AGG | + | chr4_4:77250662-77250681 | None:intergenic | 40.0% | |
| TGCCAAGTAACATCATGCAT+TGG | + | chr4_4:77250994-77251013 | None:intergenic | 40.0% | |
| CAATTATCAATGTCATGGGC+TGG | - | chr4_4:77251012-77251031 | Msa0704770:intron | 40.0% | |
| GAAGCCAGTATACAAACTAC+TGG | + | chr4_4:77251090-77251109 | None:intergenic | 40.0% | |
| ! | AACTTCGTTTTACGAGTCAG+TGG | - | chr4_4:77251112-77251131 | Msa0704770:intron | 40.0% |
| TAGCAGAAATCCTAACTGGT+TGG | + | chr4_4:77251189-77251208 | None:intergenic | 40.0% | |
| GTAGAGACAACAAATGAGCA+TGG | - | chr4_4:77251226-77251245 | Msa0704770:intron | 40.0% | |
| ! | CATTTATAGTCGAGTTCTGG+AGG | - | chr4_4:77251370-77251389 | Msa0704770:intron | 40.0% |
| CATTTGCTTGCTTGTCATGT+TGG | - | chr4_4:77251393-77251412 | Msa0704770:intron | 40.0% | |
| ATGTTACTCCAAACAGAGGT+GGG | + | chr4_4:77251446-77251465 | None:intergenic | 40.0% | |
| AATGTTACTCCAAACAGAGG+TGG | + | chr4_4:77251447-77251466 | None:intergenic | 40.0% | |
| !!! | GAGGATTTGTTTTGGAGAGT+AGG | + | chr4_4:77251494-77251513 | None:intergenic | 40.0% |
| !! | TCAGAGAGGAGGATTTGTTT+TGG | + | chr4_4:77251502-77251521 | None:intergenic | 40.0% |
| ! | ACAAATCCTCCTCTCTGAAA+AGG | - | chr4_4:77251504-77251523 | Msa0704770:intron | 40.0% |
| ! | CAAATCCTCCTCTCTGAAAA+GGG | - | chr4_4:77251505-77251524 | Msa0704770:intron | 40.0% |
| ! | TGCTTGCCCTATAAGTTTTC+TGG | - | chr4_4:77251633-77251652 | Msa0704770:intron | 40.0% |
| ! | GCTTGCCCTATAAGTTTTCT+GGG | - | chr4_4:77251634-77251653 | Msa0704770:intron | 40.0% |
| ! | GGATATTTTTCCGTACAGCA+TGG | - | chr4_4:77252021-77252040 | Msa0704770:intron | 40.0% |
| GTGGTTGACTGAACCTTAAA+TGG | - | chr4_4:77252346-77252365 | Msa0704770:five_prime_UTR | 40.0% | |
| !!! | GTTTTGAAGGGGTGAATCGA+AGG | + | chr4_4:77245762-77245781 | None:intergenic | 45.0% |
| ACGCAAACACCATCACAATG+AGG | - | chr4_4:77245830-77245849 | Msa0704770:intron | 45.0% | |
| AGCACCTTTCCTCATTGTGA+TGG | + | chr4_4:77245842-77245861 | None:intergenic | 45.0% | |
| TTGGGAATCTTCGGTATGCT+TGG | + | chr4_4:77245875-77245894 | None:intergenic | 45.0% | |
| !! | GGAATCAGGTTGGGAATCTT+CGG | + | chr4_4:77245884-77245903 | None:intergenic | 45.0% |
| ! | AACAGGTTGGGAATCAGGTT+GGG | + | chr4_4:77245893-77245912 | None:intergenic | 45.0% |
| TTGAGACGAAGCAACAGGTT+GGG | + | chr4_4:77245905-77245924 | None:intergenic | 45.0% | |
| !! | GAGGCGTTTAGCTTTAGGTT+TGG | + | chr4_4:77245947-77245966 | None:intergenic | 45.0% |
| ! | CGAAGTATTCAGGTTCGGAT+TGG | + | chr4_4:77245984-77246003 | None:intergenic | 45.0% |
| AACAAACCTCAGTGCCAACA+GGG | + | chr4_4:77246380-77246399 | None:intergenic | 45.0% | |
| CGGCCTTAATACTCACTTCT+AGG | + | chr4_4:77246536-77246555 | None:intergenic | 45.0% | |
| TGGCCTCTTGTATGGAAAGA+AGG | - | chr4_4:77246671-77246690 | Msa0704770:intron | 45.0% | |
| CACCGAGCGTAAGTAGTTTA+TGG | - | chr4_4:77246710-77246729 | Msa0704770:intron | 45.0% | |
| !!! | CATCATTTTGCGAGTTGGTC+AGG | - | chr4_4:77246736-77246755 | Msa0704770:intron | 45.0% |
| !! | GGTCAGGCAACTAATTTGCT+TGG | - | chr4_4:77246752-77246771 | Msa0704770:intron | 45.0% |
| !! | CAGGCAACTAATTTGCTTGG+TGG | - | chr4_4:77246755-77246774 | Msa0704770:intron | 45.0% |
| TAAATATGACCAGATCGGGG+GGG | + | chr4_4:77246785-77246804 | None:intergenic | 45.0% | |
| CTCAACTGGTCATGCATCAA+GGG | - | chr4_4:77246843-77246862 | Msa0704770:intron | 45.0% | |
| TCAACTGGTCATGCATCAAG+GGG | - | chr4_4:77246844-77246863 | Msa0704770:intron | 45.0% | |
| CTGCATACCTGTTGTTGTAG+CGG | - | chr4_4:77246880-77246899 | Msa0704770:intron | 45.0% | |
| AACGCGTCTTCATGATACAC+AGG | + | chr4_4:77246926-77246945 | None:intergenic | 45.0% | |
| TCAAGCAATGTCGTGATCAG+AGG | + | chr4_4:77247027-77247046 | None:intergenic | 45.0% | |
| !!! | GATAGTTTTTGGGTACAGGC+GGG | + | chr4_4:77247763-77247782 | None:intergenic | 45.0% |
| ! | CTGCTTGCCCTGTAAGTTTT+TGG | - | chr4_4:77248557-77248576 | Msa0704770:intron | 45.0% |
| ATATCCAGTTGAGCCAAAGC+CGG | - | chr4_4:77248756-77248775 | Msa0704770:CDS | 45.0% | |
| TCAGTAACATAGCAACAGGC+AGG | + | chr4_4:77249124-77249143 | None:intergenic | 45.0% | |
| ACTTATTGAGGGGGAAGAGT+TGG | - | chr4_4:77249348-77249367 | Msa0704770:intron | 45.0% | |
| AGCCATTGCTGAAATGAGTG+CGG | - | chr4_4:77249640-77249659 | Msa0704770:intron | 45.0% | |
| TTCCGCACTCATTTCAGCAA+TGG | + | chr4_4:77249645-77249664 | None:intergenic | 45.0% | |
| ACCTGATGTGTCAGGTGTTA+AGG | - | chr4_4:77249727-77249746 | Msa0704770:intron | 45.0% | |
| ACCTTAACACCTGACACATC+AGG | + | chr4_4:77249731-77249750 | None:intergenic | 45.0% | |
| GATGTGTCAGGTGTTAAGGT+TGG | - | chr4_4:77249731-77249750 | Msa0704770:intron | 45.0% | |
| GTATTACGGAAAGGCTCATG+AGG | - | chr4_4:77250071-77250090 | Msa0704770:intron | 45.0% | |
| AAATACGGGCAAAACAAGCC+AGG | + | chr4_4:77250133-77250152 | None:intergenic | 45.0% | |
| GATAAGTGAAGTAGGTGGTG+AGG | - | chr4_4:77250262-77250281 | Msa0704770:intron | 45.0% | |
| TTGTAGCTTCCATCAGGAAG+AGG | + | chr4_4:77250556-77250575 | None:intergenic | 45.0% | |
| GAGATGTACTATCCCTGTTC+TGG | - | chr4_4:77250646-77250665 | Msa0704770:intron | 45.0% | |
| CAGCACACATCTATGAAGCA+CGG | + | chr4_4:77250966-77250985 | None:intergenic | 45.0% | |
| TATACGTTCCCACCTCTGTT+TGG | - | chr4_4:77251435-77251454 | Msa0704770:CDS | 45.0% | |
| !! | TCCTCTCTGAAAAGGGTGTT+GGG | - | chr4_4:77251512-77251531 | Msa0704770:intron | 45.0% |
| !! | GTGGTTATGATGGAGTGTTG+CGG | - | chr4_4:77251747-77251766 | Msa0704770:CDS | 45.0% |
| ! | AGGGAATTTTGTACGAGGCA+TGG | - | chr4_4:77251799-77251818 | Msa0704770:intron | 45.0% |
| CCTGTCCATCTTGTTGACAA+GGG | + | chr4_4:77252080-77252099 | None:intergenic | 45.0% | |
| ACCTGTCCATCTTGTTGACA+AGG | + | chr4_4:77252081-77252100 | None:intergenic | 45.0% | |
| CAACAAGATGGACAGGTAAC+AGG | - | chr4_4:77252084-77252103 | Msa0704770:intron | 45.0% | |
| TCAACTGCAACACATCAGGA+AGG | + | chr4_4:77252222-77252241 | None:intergenic | 45.0% | |
| TCTCTCAACTGCAACACATC+AGG | + | chr4_4:77252226-77252245 | None:intergenic | 45.0% | |
| GTCTAACAGGAGGCCATTTA+AGG | + | chr4_4:77252362-77252381 | None:intergenic | 45.0% | |
| TTAGGAACTTGTCAGGGAAG+TGG | - | chr4_4:77252461-77252480 | Msa0704770:five_prime_UTR | 45.0% | |
| AACTTGTCAGGGAAGTGGTT+TGG | - | chr4_4:77252466-77252485 | Msa0704770:five_prime_UTR | 45.0% | |
| ACTTGTCAGGGAAGTGGTTT+GGG | - | chr4_4:77252467-77252486 | Msa0704770:five_prime_UTR | 45.0% | |
| !! | TATATTTATATATAAAATCA+AGG | + | chr4_4:77245685-77245704 | None:intergenic | 5.0% |
| !! | TTTGTTTATTAATATTATTA+AGG | - | chr4_4:77246209-77246228 | Msa0704770:CDS | 5.0% |
| !! | TGAATCGAAGGCGCTAGATC+CGG | + | chr4_4:77245750-77245769 | None:intergenic | 50.0% |
| ! | CAACAGGTTGGGAATCAGGT+TGG | + | chr4_4:77245894-77245913 | None:intergenic | 50.0% |
| ! | GAAGCAACAGGTTGGGAATC+AGG | + | chr4_4:77245898-77245917 | None:intergenic | 50.0% |
| CTTGAGACGAAGCAACAGGT+TGG | + | chr4_4:77245906-77245925 | None:intergenic | 50.0% | |
| ! | AGGTTCGGATTGGGGTTTAG+AGG | + | chr4_4:77245974-77245993 | None:intergenic | 50.0% |
| TGGCTCGAAACATTCCCTGT+TGG | - | chr4_4:77246363-77246382 | Msa0704770:intron | 50.0% | |
| AACATTCCCTGTTGGCACTG+AGG | - | chr4_4:77246371-77246390 | Msa0704770:intron | 50.0% | |
| CAACAAACCTCAGTGCCAAC+AGG | + | chr4_4:77246381-77246400 | None:intergenic | 50.0% | |
| CAGAATGCATTCGAAGAGGG+TGG | - | chr4_4:77246651-77246670 | Msa0704770:intron | 50.0% | |
| !! | TACGCTCGGTGCAACCAAAT+AGG | + | chr4_4:77246701-77246720 | None:intergenic | 50.0% |
| GTTGAGCTGCAAACGACAAC+AGG | + | chr4_4:77246829-77246848 | None:intergenic | 50.0% | |
| ! | GTTGTCGTTTGCAGCTCAAC+TGG | - | chr4_4:77246829-77246848 | Msa0704770:intron | 50.0% |
| GCTCAACTGGTCATGCATCA+AGG | - | chr4_4:77246842-77246861 | Msa0704770:intron | 50.0% | |
| GAGCTTACCGCTACAACAAC+AGG | + | chr4_4:77246890-77246909 | None:intergenic | 50.0% | |
| TAGCGGTAAGCTCTCACACT+GGG | - | chr4_4:77246897-77246916 | Msa0704770:intron | 50.0% | |
| CAGATAAACAAGGTCCGGCA+AGG | + | chr4_4:77247148-77247167 | None:intergenic | 50.0% | |
| ! | CTTGCCGGACCTTGTTTATC+TGG | - | chr4_4:77247146-77247165 | Msa0704770:intron | 50.0% |
| TCTTGCGTTGCACCCAAAGA+AGG | - | chr4_4:77247626-77247645 | Msa0704770:intron | 50.0% | |
| TTTGGGTACAGGCGGGAAAA+GGG | + | chr4_4:77247756-77247775 | None:intergenic | 50.0% | |
| !! | TTTTGGGTACAGGCGGGAAA+AGG | + | chr4_4:77247757-77247776 | None:intergenic | 50.0% |
| !! | ATTACCGGCTTTGGCTCAAC+TGG | + | chr4_4:77248763-77248782 | None:intergenic | 50.0% |
| ACCTGACACATCAGGTGCAT+CGG | + | chr4_4:77249723-77249742 | None:intergenic | 50.0% | |
| GGACATATCCATATCCAGGG+CGG | - | chr4_4:77249912-77249931 | Msa0704770:intron | 50.0% | |
| GACATATCCATATCCAGGGC+GGG | - | chr4_4:77249913-77249932 | Msa0704770:intron | 50.0% | |
| AAGTTTACCCGGCAACCTCT+TGG | - | chr4_4:77250163-77250182 | Msa0704770:intron | 50.0% | |
| ! | ATTCGCGTCGAAAGCATGTC+CGG | + | chr4_4:77250940-77250959 | None:intergenic | 50.0% |
| !! | AATGTCATGGGCTGGAATGC+TGG | - | chr4_4:77251020-77251039 | Msa0704770:intron | 50.0% |
| !! | GGCCCCCTTTTGTTTGACAT+AGG | - | chr4_4:77251298-77251317 | Msa0704770:intron | 50.0% |
| !! | TGCTTGTCATGTTGGCTTCG+TGG | - | chr4_4:77251401-77251420 | Msa0704770:intron | 50.0% |
| ! | CAACACCCTTTTCAGAGAGG+AGG | + | chr4_4:77251513-77251532 | None:intergenic | 50.0% |
| ! | CTCCTCTCTGAAAAGGGTGT+TGG | - | chr4_4:77251511-77251530 | Msa0704770:intron | 50.0% |
| ! | TCCCAACACCCTTTTCAGAG+AGG | + | chr4_4:77251516-77251535 | None:intergenic | 50.0% |
| !! | GGAGACAGTTACCGACTTAC+TGG | - | chr4_4:77251533-77251552 | Msa0704770:intron | 50.0% |
| !! | ACAGTTACCGACTTACTGGC+AGG | - | chr4_4:77251537-77251556 | Msa0704770:intron | 50.0% |
| TACGAGGCATGGTTCCTCAT+CGG | - | chr4_4:77251810-77251829 | Msa0704770:intron | 50.0% | |
| !! | CTTACTGGCTTTGGCTCAAC+TGG | + | chr4_4:77251953-77251972 | None:intergenic | 50.0% |
| CCCTTGTCAACAAGATGGAC+AGG | - | chr4_4:77252077-77252096 | Msa0704770:intron | 50.0% | |
| GAAGAGGGTGGCCTCTTGTA+TGG | - | chr4_4:77246663-77246682 | Msa0704770:intron | 55.0% | |
| GTAGCGGTAAGCTCTCACAC+TGG | - | chr4_4:77246896-77246915 | Msa0704770:intron | 55.0% | |
| TTTGGGTGGGGCCAGTTTAG+TGG | + | chr4_4:77247051-77247070 | None:intergenic | 55.0% | |
| ACTAAACTGGCCCCACCCAA+AGG | - | chr4_4:77247050-77247069 | Msa0704770:intron | 55.0% | |
| CTGGGTTCCGTACATTCCTC+TGG | - | chr4_4:77247424-77247443 | Msa0704770:intron | 55.0% | |
| CGCTGCTCCAGAGGAATGTA+CGG | + | chr4_4:77247434-77247453 | None:intergenic | 55.0% | |
| !! | CGTACATTCCTCTGGAGCAG+CGG | - | chr4_4:77247432-77247451 | Msa0704770:intron | 55.0% |
| AGGTGCATCGGGAGATGGAA+CGG | + | chr4_4:77249711-77249730 | None:intergenic | 55.0% | |
| ACATCAGGTGCATCGGGAGA+TGG | + | chr4_4:77249716-77249735 | None:intergenic | 55.0% | |
| CCTGACACATCAGGTGCATC+GGG | + | chr4_4:77249722-77249741 | None:intergenic | 55.0% | |
| ! | ATGGAGCACCAAGAGGTTGC+CGG | + | chr4_4:77250174-77250193 | None:intergenic | 55.0% |
| GAAGGCCTAAGTCGGAAACC+AGG | + | chr4_4:77250862-77250881 | None:intergenic | 55.0% | |
| TATGACCAGATCGGGGGGGT+TGG | + | chr4_4:77246781-77246800 | None:intergenic | 60.0% | |
| GATGCATACCGCTGCTCCAG+AGG | + | chr4_4:77247443-77247462 | None:intergenic | 60.0% | |
| GGTGCATCGGGAGATGGAAC+GGG | + | chr4_4:77249710-77249729 | None:intergenic | 60.0% | |
| CCCGATGCACCTGATGTGTC+AGG | - | chr4_4:77249719-77249738 | Msa0704770:intron | 60.0% | |
| ! | TGGAGCACCAAGAGGTTGCC+GGG | + | chr4_4:77250173-77250192 | None:intergenic | 60.0% |
| GCCTAAGTCGGAAACCAGGC+GGG | + | chr4_4:77250858-77250877 | None:intergenic | 60.0% | |
| GGCCTAAGTCGGAAACCAGG+CGG | + | chr4_4:77250859-77250878 | None:intergenic | 60.0% | |
| GACGACGCCTGCCAGTAAGT+CGG | + | chr4_4:77251547-77251566 | None:intergenic | 60.0% | |
| ! | ACTGGCAGGCGTCGTCATAC+TGG | - | chr4_4:77251551-77251570 | Msa0704770:intron | 60.0% |
| CGTACGCTTCAGCTGACCAC+TGG | - | chr4_4:77251687-77251706 | Msa0704770:intron | 60.0% | |
| CGGTCATCCCGCCCTGGATA+TGG | + | chr4_4:77249923-77249942 | None:intergenic | 65.0% | |
| CATCATCGGTCATCCCGCCC+TGG | + | chr4_4:77249929-77249948 | None:intergenic | 65.0% | |
| ! | AGTCGGAAACCAGGCGGGCT+CGG | + | chr4_4:77250853-77250872 | None:intergenic | 65.0% |
| GCCCGCCTGGTTTCCGACTT+AGG | - | chr4_4:77250854-77250873 | Msa0704770:intron | 65.0% | |
| ! | GCAGGCGTCGTCATACTGGC+AGG | - | chr4_4:77251555-77251574 | Msa0704770:intron | 65.0% |
| AAAGCTCACCCGAGCCCGCC+TGG | - | chr4_4:77250841-77250860 | Msa0704770:intron | 70.0% | |
| ! | GTCGGAAACCAGGCGGGCTC+GGG | + | chr4_4:77250852-77250871 | None:intergenic | 70.0% |
| GGTGGCCAACCCCCCCGATC+TGG | - | chr4_4:77246773-77246792 | Msa0704770:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 77245624 | 77252509 | 77245624 | ID=Msa0704770;Name=Msa0704770 |
| chr4_4 | mRNA | 77245624 | 77252509 | 77245624 | ID=Msa0704770-mRNA-1;Parent=Msa0704770;Name=Msa0704770-mRNA-1;_AED=0.22;_eAED=0.22;_QI=223|0.86|0.81|0.87|0.93|0.93|16|0|382 |
| chr4_4 | exon | 77245624 | 77245668 | 77245624 | ID=Msa0704770-mRNA-1:exon:24464;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77246166 | 77246234 | 77246166 | ID=Msa0704770-mRNA-1:exon:24463;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77248041 | 77248079 | 77248041 | ID=Msa0704770-mRNA-1:exon:24462;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77248385 | 77248513 | 77248385 | ID=Msa0704770-mRNA-1:exon:24461;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77248596 | 77248643 | 77248596 | ID=Msa0704770-mRNA-1:exon:24460;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77248737 | 77248799 | 77248737 | ID=Msa0704770-mRNA-1:exon:24459;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77249192 | 77249230 | 77249192 | ID=Msa0704770-mRNA-1:exon:24458;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77249356 | 77249435 | 77249356 | ID=Msa0704770-mRNA-1:exon:24457;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77249566 | 77249624 | 77249566 | ID=Msa0704770-mRNA-1:exon:24456;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77250486 | 77250545 | 77250486 | ID=Msa0704770-mRNA-1:exon:24455;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77250680 | 77250804 | 77250680 | ID=Msa0704770-mRNA-1:exon:24454;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77251232 | 77251290 | 77251232 | ID=Msa0704770-mRNA-1:exon:24453;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77251416 | 77251479 | 77251416 | ID=Msa0704770-mRNA-1:exon:24452;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77251594 | 77251647 | 77251594 | ID=Msa0704770-mRNA-1:exon:24451;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77251741 | 77251779 | 77251741 | ID=Msa0704770-mRNA-1:exon:24450;Parent=Msa0704770-mRNA-1 |
| chr4_4 | exon | 77252113 | 77252509 | 77252113 | ID=Msa0704770-mRNA-1:exon:24449;Parent=Msa0704770-mRNA-1 |
| chr4_4 | five_prime_UTR | 77252287 | 77252509 | 77252287 | ID=Msa0704770-mRNA-1:five_prime_utr;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77252113 | 77252286 | 77252113 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77251741 | 77251779 | 77251741 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77251594 | 77251647 | 77251594 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77251416 | 77251479 | 77251416 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77251232 | 77251290 | 77251232 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77250680 | 77250804 | 77250680 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77250486 | 77250545 | 77250486 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77249566 | 77249624 | 77249566 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77249356 | 77249435 | 77249356 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77249192 | 77249230 | 77249192 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77248737 | 77248799 | 77248737 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77248596 | 77248643 | 77248596 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77248385 | 77248513 | 77248385 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77248041 | 77248079 | 77248041 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77246166 | 77246234 | 77246166 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| chr4_4 | CDS | 77245624 | 77245668 | 77245624 | ID=Msa0704770-mRNA-1:cds;Parent=Msa0704770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
