Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584190 | XP_003606240.1 | 94.179 | 481 | 25 | 1 | 1 | 478 | 1 | 481 | 0.0 | 941 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584190 | sp|Q9ZUX7|IPT2_ARATH | 57.991 | 438 | 169 | 4 | 22 | 455 | 25 | 451 | 2.53e-174 | 500 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0584190 | Msa0610430 | 0.801565 | 8.481679e-49 | -8.615850e-47 |
| Msa0584190 | Msa0747260 | 0.810755 | 9.844886e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584190 | MtrunA17_Chr4g0027051 | 94.179 | 481 | 25 | 1 | 1 | 478 | 1 | 481 | 0.0 | 941 |
| Msa0584190 | MtrunA17_Chr1g0185751 | 53.043 | 115 | 54 | 0 | 9 | 123 | 26 | 140 | 1.32e-36 | 137 |
| Msa0584190 | MtrunA17_Chr1g0185751 | 28.436 | 211 | 115 | 2 | 216 | 423 | 150 | 327 | 1.22e-25 | 107 |
| Msa0584190 | MtrunA17_Chr4g0065731 | 54.386 | 114 | 51 | 1 | 13 | 125 | 33 | 146 | 4.55e-33 | 128 |
| Msa0584190 | MtrunA17_Chr4g0065731 | 33.152 | 184 | 89 | 4 | 216 | 398 | 153 | 303 | 7.23e-22 | 96.3 |
| Msa0584190 | MtrunA17_Chr1g0209731 | 53.390 | 118 | 52 | 3 | 9 | 123 | 55 | 172 | 5.84e-31 | 122 |
| Msa0584190 | MtrunA17_Chr1g0209731 | 32.701 | 211 | 99 | 5 | 198 | 394 | 180 | 361 | 4.38e-26 | 108 |
| Msa0584190 | MtrunA17_Chr2g0287691 | 53.211 | 109 | 50 | 1 | 18 | 125 | 39 | 147 | 8.24e-30 | 119 |
| Msa0584190 | MtrunA17_Chr2g0287691 | 33.516 | 182 | 85 | 3 | 215 | 392 | 153 | 302 | 3.58e-23 | 100 |
| Msa0584190 | MtrunA17_Chr7g0225071 | 48.182 | 110 | 56 | 1 | 15 | 123 | 11 | 120 | 2.95e-29 | 116 |
| Msa0584190 | MtrunA17_Chr7g0225071 | 30.978 | 184 | 91 | 4 | 216 | 394 | 130 | 282 | 6.23e-19 | 87.4 |
| Msa0584190 | MtrunA17_Chr7g0223091 | 48.182 | 110 | 56 | 1 | 15 | 123 | 11 | 120 | 7.57e-29 | 115 |
| Msa0584190 | MtrunA17_Chr7g0223091 | 30.435 | 184 | 92 | 3 | 216 | 394 | 130 | 282 | 6.17e-19 | 87.4 |
| Msa0584190 | MtrunA17_Chr6g0471071 | 41.611 | 149 | 73 | 4 | 15 | 149 | 25 | 173 | 1.23e-28 | 115 |
| Msa0584190 | MtrunA17_Chr6g0471121 | 46.429 | 112 | 59 | 1 | 15 | 125 | 25 | 136 | 1.61e-27 | 112 |
| Msa0584190 | MtrunA17_Chr6g0471121 | 30.978 | 184 | 91 | 4 | 216 | 394 | 144 | 296 | 9.23e-18 | 84.3 |
| Msa0584190 | MtrunA17_Chr6g0471161 | 46.429 | 112 | 59 | 1 | 15 | 125 | 25 | 136 | 1.61e-27 | 112 |
| Msa0584190 | MtrunA17_Chr6g0471161 | 30.978 | 184 | 91 | 4 | 216 | 394 | 144 | 296 | 9.23e-18 | 84.3 |
| Msa0584190 | MtrunA17_Chr3g0084591 | 42.857 | 126 | 66 | 2 | 15 | 139 | 12 | 132 | 2.31e-27 | 111 |
| Msa0584190 | MtrunA17_Chr3g0084591 | 27.306 | 271 | 156 | 5 | 149 | 409 | 59 | 298 | 5.75e-20 | 90.5 |
| Msa0584190 | MtrunA17_Chr3g0084581 | 42.857 | 126 | 66 | 2 | 15 | 139 | 12 | 132 | 2.43e-27 | 111 |
| Msa0584190 | MtrunA17_Chr3g0084581 | 26.937 | 271 | 157 | 5 | 149 | 409 | 59 | 298 | 5.08e-19 | 87.8 |
| Msa0584190 | MtrunA17_Chr6g0471151 | 45.536 | 112 | 60 | 1 | 15 | 125 | 25 | 136 | 4.94e-27 | 109 |
| Msa0584190 | MtrunA17_Chr6g0471151 | 28.700 | 223 | 123 | 3 | 149 | 366 | 72 | 263 | 4.24e-17 | 81.3 |
| Msa0584190 | MtrunA17_Chr6g0471131 | 45.536 | 112 | 60 | 1 | 15 | 125 | 25 | 136 | 4.94e-27 | 109 |
| Msa0584190 | MtrunA17_Chr6g0471131 | 28.700 | 223 | 123 | 3 | 149 | 366 | 72 | 263 | 4.24e-17 | 81.3 |
| Msa0584190 | MtrunA17_Chr6g0471101 | 45.536 | 112 | 60 | 1 | 15 | 125 | 25 | 136 | 4.94e-27 | 109 |
| Msa0584190 | MtrunA17_Chr6g0471101 | 28.700 | 223 | 123 | 3 | 149 | 366 | 72 | 263 | 4.24e-17 | 81.3 |
| Msa0584190 | MtrunA17_Chr6g0471141 | 45.536 | 112 | 60 | 1 | 15 | 125 | 25 | 136 | 4.94e-27 | 109 |
| Msa0584190 | MtrunA17_Chr6g0471141 | 28.700 | 223 | 123 | 3 | 149 | 366 | 72 | 263 | 4.24e-17 | 81.3 |
| Msa0584190 | MtrunA17_Chr6g0471081 | 45.536 | 112 | 60 | 1 | 15 | 125 | 25 | 136 | 5.17e-27 | 109 |
| Msa0584190 | MtrunA17_Chr6g0471081 | 33.088 | 136 | 86 | 1 | 149 | 279 | 72 | 207 | 1.45e-13 | 70.5 |
| Msa0584190 | MtrunA17_Chr3g0084911 | 44.068 | 118 | 65 | 1 | 7 | 123 | 2 | 119 | 1.26e-26 | 109 |
| Msa0584190 | MtrunA17_Chr3g0084911 | 29.648 | 199 | 104 | 3 | 216 | 409 | 129 | 296 | 7.50e-20 | 90.1 |
| Msa0584190 | MtrunA17_Chr6g0471111 | 45.536 | 112 | 60 | 1 | 15 | 125 | 25 | 136 | 1.49e-26 | 109 |
| Msa0584190 | MtrunA17_Chr6g0471111 | 28.516 | 256 | 142 | 5 | 149 | 394 | 72 | 296 | 8.03e-18 | 84.3 |
| Msa0584190 | MtrunA17_Chr2g0315111 | 45.455 | 110 | 59 | 1 | 15 | 123 | 26 | 135 | 1.95e-26 | 109 |
| Msa0584190 | MtrunA17_Chr2g0315111 | 28.261 | 184 | 96 | 3 | 216 | 394 | 145 | 297 | 5.67e-16 | 79.0 |
| Msa0584190 | MtrunA17_Chr3g0084611 | 44.954 | 109 | 59 | 1 | 16 | 123 | 10 | 118 | 3.17e-26 | 108 |
| Msa0584190 | MtrunA17_Chr3g0084611 | 30.151 | 199 | 103 | 3 | 216 | 409 | 128 | 295 | 5.92e-21 | 93.2 |
| Msa0584190 | MtrunA17_Chr3g0080851 | 42.373 | 118 | 67 | 1 | 7 | 123 | 16 | 133 | 8.40e-26 | 107 |
| Msa0584190 | MtrunA17_Chr3g0080851 | 28.936 | 235 | 126 | 5 | 185 | 409 | 107 | 310 | 4.21e-20 | 90.9 |
| Msa0584190 | MtrunA17_Chr6g0471091 | 44.643 | 112 | 61 | 1 | 15 | 125 | 25 | 136 | 1.26e-25 | 107 |
| Msa0584190 | MtrunA17_Chr6g0471091 | 29.457 | 258 | 125 | 7 | 142 | 394 | 91 | 296 | 1.92e-18 | 86.3 |
| Msa0584190 | MtrunA17_Chr3g0084901 | 43.220 | 118 | 66 | 1 | 7 | 123 | 15 | 132 | 1.78e-25 | 106 |
| Msa0584190 | MtrunA17_Chr3g0084901 | 26.562 | 256 | 147 | 4 | 149 | 394 | 70 | 294 | 3.03e-17 | 82.4 |
| Msa0584190 | MtrunA17_Chr3g0084601 | 44.037 | 109 | 60 | 1 | 16 | 123 | 11 | 119 | 1.79e-25 | 106 |
| Msa0584190 | MtrunA17_Chr3g0084601 | 27.197 | 239 | 133 | 4 | 181 | 409 | 89 | 296 | 2.44e-18 | 85.5 |
| Msa0584190 | MtrunA17_Chr3g0084891 | 42.373 | 118 | 67 | 1 | 7 | 123 | 15 | 132 | 2.31e-24 | 101 |
| Msa0584190 | MtrunA17_Chr3g0084891 | 27.684 | 177 | 115 | 3 | 148 | 317 | 69 | 239 | 2.83e-14 | 72.8 |
| Msa0584190 | MtrunA17_Chr2g0316331 | 38.793 | 116 | 71 | 0 | 8 | 123 | 37 | 152 | 1.00e-20 | 94.7 |
| Msa0584190 | MtrunA17_Chr3g0084561 | 28.099 | 242 | 131 | 6 | 181 | 410 | 6 | 216 | 7.76e-20 | 88.2 |
| Msa0584190 | MtrunA17_Chr6g0471061 | 50.667 | 75 | 36 | 1 | 18 | 91 | 14 | 88 | 5.48e-19 | 81.6 |
| Msa0584190 | MtrunA17_Chr6g0471171 | 40.541 | 111 | 41 | 2 | 15 | 125 | 11 | 96 | 3.12e-18 | 85.1 |
| Msa0584190 | MtrunA17_Chr6g0471171 | 29.891 | 184 | 93 | 3 | 216 | 394 | 104 | 256 | 1.23e-17 | 83.2 |
| Msa0584190 | MtrunA17_Chr3g0080841 | 37.705 | 122 | 53 | 4 | 171 | 287 | 11 | 114 | 3.42e-18 | 81.6 |
| Msa0584190 | MtrunA17_Chr7g0215101 | 29.348 | 184 | 94 | 3 | 216 | 394 | 46 | 198 | 5.14e-18 | 82.8 |
| Msa0584190 | MtrunA17_Chr7g0215111 | 52.542 | 59 | 28 | 0 | 15 | 73 | 27 | 85 | 2.14e-16 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584190 | AT2G27760.1 | 57.991 | 438 | 169 | 4 | 22 | 455 | 25 | 451 | 2.57e-175 | 500 |
| Msa0584190 | AT1G68460.1 | 50.893 | 112 | 54 | 1 | 15 | 125 | 63 | 174 | 1.18e-31 | 125 |
| Msa0584190 | AT1G68460.1 | 31.122 | 196 | 94 | 6 | 212 | 395 | 191 | 357 | 1.15e-17 | 84.7 |
| Msa0584190 | AT5G19040.1 | 51.304 | 115 | 55 | 1 | 11 | 124 | 27 | 141 | 2.17e-31 | 123 |
| Msa0584190 | AT5G19040.1 | 35.519 | 183 | 82 | 3 | 215 | 393 | 148 | 298 | 5.68e-26 | 108 |
| Msa0584190 | AT5G19040.2 | 51.304 | 115 | 55 | 1 | 11 | 124 | 27 | 141 | 2.17e-31 | 123 |
| Msa0584190 | AT5G19040.2 | 35.519 | 183 | 82 | 3 | 215 | 393 | 148 | 298 | 5.68e-26 | 108 |
| Msa0584190 | AT5G19040.3 | 51.304 | 115 | 55 | 1 | 11 | 124 | 27 | 141 | 2.17e-31 | 123 |
| Msa0584190 | AT5G19040.3 | 35.519 | 183 | 82 | 3 | 215 | 393 | 148 | 298 | 5.68e-26 | 108 |
| Msa0584190 | AT3G63110.1 | 47.407 | 135 | 65 | 2 | 5 | 139 | 30 | 158 | 4.53e-31 | 123 |
| Msa0584190 | AT3G63110.1 | 31.915 | 188 | 89 | 3 | 216 | 397 | 157 | 311 | 2.20e-23 | 101 |
| Msa0584190 | AT4G24650.1 | 53.211 | 109 | 50 | 1 | 18 | 125 | 6 | 114 | 1.23e-28 | 115 |
| Msa0584190 | AT4G24650.1 | 27.692 | 195 | 97 | 6 | 215 | 394 | 134 | 299 | 5.14e-16 | 79.3 |
| Msa0584190 | AT1G25410.1 | 50.000 | 110 | 53 | 2 | 18 | 125 | 46 | 155 | 2.71e-27 | 112 |
| Msa0584190 | AT3G23630.1 | 47.541 | 122 | 59 | 3 | 13 | 130 | 31 | 151 | 1.68e-26 | 110 |
| Msa0584190 | AT3G23630.1 | 35.484 | 186 | 83 | 4 | 217 | 398 | 152 | 304 | 6.47e-25 | 105 |
| Msa0584190 | AT3G19160.1 | 49.533 | 107 | 53 | 1 | 18 | 123 | 44 | 150 | 8.30e-25 | 105 |
| Msa0584190 | AT5G20040.2 | 41.176 | 102 | 60 | 0 | 19 | 120 | 52 | 153 | 1.10e-19 | 92.0 |
| Msa0584190 | AT5G20040.1 | 41.176 | 102 | 60 | 0 | 19 | 120 | 52 | 153 | 1.29e-19 | 91.7 |
| Msa0584190 | AT5G20040.3 | 41.176 | 102 | 60 | 0 | 19 | 120 | 52 | 153 | 1.55e-19 | 91.7 |
Find 116 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGACCTTTCTATGGTTATT+TGG | 0.152843 | 4_2:+3269183 | None:intergenic |
| CGATTTGAGTGAAAGCTATT+TGG | 0.170907 | 4_2:-3269401 | Msa0584190:CDS |
| AACAACTGTGCTTGATAAAA+AGG | 0.239084 | 4_2:+3266474 | None:intergenic |
| ATATAGAAACATATGTAAAA+TGG | 0.258988 | 4_2:-3266403 | Msa0584190:three_prime_UTR |
| AGAGTTGTAGATTTAGTATC+AGG | 0.260641 | 4_2:+3268004 | None:intergenic |
| TACTAAATCTACAACTCTTT+TGG | 0.272839 | 4_2:-3267999 | Msa0584190:CDS |
| GGGTACTGTGAATCCGAATT+TGG | 0.273951 | 4_2:-3270945 | Msa0584190:CDS |
| TTACTCATCTGACCTTTCTA+TGG | 0.299747 | 4_2:+3269175 | None:intergenic |
| CGATCCATATCTTTCATATC+AGG | 0.304895 | 4_2:+3266532 | None:intergenic |
| TAGGCAAATCAAATGAAGTA+TGG | 0.323545 | 4_2:-3267373 | Msa0584190:CDS |
| CGGTGTGGTGCATCATCTAT+TGG | 0.327533 | 4_2:-3270966 | Msa0584190:CDS |
| GGAAGCTTGTCGTCAACCTT+TGG | 0.331504 | 4_2:-3267293 | Msa0584190:CDS |
| TGGATTCTATTTGCTGCAAC+TGG | 0.345397 | 4_2:+3269207 | None:intergenic |
| TGGAACTAATTACTATATTC+AGG | 0.349487 | 4_2:-3270755 | Msa0584190:intron |
| TATCATCAAAAGTTACAAAA+AGG | 0.354585 | 4_2:+3266423 | None:intergenic |
| TGCAGTGATCGGGTTCTTAG+AGG | 0.362325 | 4_2:-3266698 | Msa0584190:CDS |
| AATAGTGAGCCATTGTTTGA+TGG | 0.366353 | 4_2:-3268055 | Msa0584190:CDS |
| CCGGTTATGACCACCACTTT+TGG | 0.371072 | 4_2:+3271127 | None:intergenic |
| CCTTTCTATGGTTATTTGGA+TGG | 0.372046 | 4_2:+3269187 | None:intergenic |
| GAAGCTTGTCGTCAACCTTT+GGG | 0.377441 | 4_2:-3267292 | Msa0584190:CDS |
| TTATTAAGTGATATGACAAC+TGG | 0.386456 | 4_2:+3266318 | None:intergenic |
| GATTTGAGTGAAAGCTATTT+GGG | 0.386570 | 4_2:-3269400 | Msa0584190:CDS |
| CACTTACCTGTTATTGTTGG+TGG | 0.392726 | 4_2:-3270775 | Msa0584190:CDS |
| GAATGTTGTTACTATCTTTG+TGG | 0.400302 | 4_2:+3267328 | None:intergenic |
| ATCAAGCACAGTTGTTCCTC+TGG | 0.413748 | 4_2:-3266467 | Msa0584190:three_prime_UTR |
| TTAGTTCCACCAACAATAAC+AGG | 0.414098 | 4_2:+3270769 | None:intergenic |
| TTCTTAGAGGGTTACATGAA+TGG | 0.417120 | 4_2:-3266685 | Msa0584190:CDS |
| CCAAAAGTGGTGGTCATAAC+CGG | 0.420448 | 4_2:-3271127 | Msa0584190:CDS |
| GTTGACAGGCCTGCAGTGAT+CGG | 0.422034 | 4_2:-3266709 | Msa0584190:intron |
| ACTGGAAACATTGTTTGGTT+GGG | 0.428105 | 4_2:-3267522 | Msa0584190:CDS |
| ATTGAGTCCAGAGGTCCCTT+TGG | 0.428923 | 4_2:+3267240 | None:intergenic |
| TTAGCAGTGAATTCCAAATT+CGG | 0.428934 | 4_2:+3270932 | None:intergenic |
| AGTCGACTGGAAACATTGTT+TGG | 0.429317 | 4_2:-3267527 | Msa0584190:CDS |
| TTCAGAGAAGGGGAGTTTGT+TGG | 0.437008 | 4_2:+3270994 | None:intergenic |
| TCACCCTGATATGAAAGATA+TGG | 0.442412 | 4_2:-3266536 | Msa0584190:three_prime_UTR |
| AATCACTTACCTGTTATTGT+TGG | 0.458319 | 4_2:-3270778 | Msa0584190:CDS |
| ATAACCGGCCCCACCGGCTC+CGG | 0.461019 | 4_2:-3271112 | Msa0584190:CDS |
| ATTAGTTTGTACTCTCGAAC+TGG | 0.462338 | 4_2:-3268863 | Msa0584190:CDS |
| GAAGAGGATGCTCAGTCGAC+TGG | 0.463895 | 4_2:-3267540 | Msa0584190:CDS |
| CATTGGTGTCCGCGAATTTG+AGG | 0.465811 | 4_2:-3268152 | Msa0584190:CDS |
| GGTGTGGTGCATCATCTATT+GGG | 0.467739 | 4_2:-3270965 | Msa0584190:CDS |
| CAGGAGACTTGTCCGCCGTC+AGG | 0.470900 | 4_2:-3267945 | Msa0584190:intron |
| ACAACATTCCTGAGTGAGAA+TGG | 0.472131 | 4_2:-3267314 | Msa0584190:CDS |
| TTAGAAGATCCTCAAATTCG+CGG | 0.475029 | 4_2:+3268143 | None:intergenic |
| TCTTAGAGGGTTACATGAAT+GGG | 0.476937 | 4_2:-3266684 | Msa0584190:CDS |
| GACTGGAAACATTGTTTGGT+TGG | 0.477682 | 4_2:-3267523 | Msa0584190:CDS |
| TCAACCTTTGGGATGTCAAA+TGG | 0.480422 | 4_2:-3267281 | Msa0584190:CDS |
| ATTGTTTGATGGCAATTTGT+TGG | 0.482205 | 4_2:-3268044 | Msa0584190:CDS |
| TTGACAGGCCTGCAGTGATC+GGG | 0.494285 | 4_2:-3266708 | Msa0584190:intron |
| AAATAATCCAAAGGGACCTC+TGG | 0.497189 | 4_2:-3267247 | Msa0584190:CDS |
| AATGGCCTGTCGCAAACCTC+TGG | 0.502020 | 4_2:+3268171 | None:intergenic |
| ATCAGCGTTGATTACTTCGA+TGG | 0.504631 | 4_2:+3271051 | None:intergenic |
| TCTACATATCTATCTAGCAC+TGG | 0.510259 | 4_2:+3268271 | None:intergenic |
| GAACAGCATATACGCGGTCG+TGG | 0.511572 | 4_2:-3266662 | Msa0584190:CDS |
| AAGAGAGGGGAAAATAATTG+AGG | 0.512112 | 4_2:-3268092 | Msa0584190:CDS |
| GAGTTGTAGATTTAGTATCA+GGG | 0.512186 | 4_2:+3268005 | None:intergenic |
| GTGGGTAGGGTTTATTGTTG+CGG | 0.523153 | 4_2:+3271159 | None:intergenic |
| AGAGAGGGGAAAATAATTGA+GGG | 0.523489 | 4_2:-3268091 | Msa0584190:CDS |
| TCAGCGTTGATTACTTCGAT+GGG | 0.524921 | 4_2:+3271052 | None:intergenic |
| AGAAGCAATTGAGAAAGTAA+AGG | 0.528300 | 4_2:-3267975 | Msa0584190:CDS |
| CTCAAATTCGCGGACACCAA+TGG | 0.531223 | 4_2:+3268153 | None:intergenic |
| TTGTCATGGAAAGATTTGTA+TGG | 0.531888 | 4_2:-3266508 | Msa0584190:three_prime_UTR |
| CTTACTTAATATTGATTCCG+TGG | 0.533744 | 4_2:+3267481 | None:intergenic |
| AGAGGTTTGCGACAGGCCAT+TGG | 0.537281 | 4_2:-3268169 | Msa0584190:CDS |
| TTTGGGATGTCAAATGGCAC+TGG | 0.537369 | 4_2:-3267275 | Msa0584190:CDS |
| AGTTGTAGATTTAGTATCAG+GGG | 0.537453 | 4_2:+3268006 | None:intergenic |
| AGCTATTTGGGTGACTCACC+TGG | 0.539708 | 4_2:-3269388 | Msa0584190:intron |
| GTAAAATGGAATTAGATCGC+AGG | 0.546146 | 4_2:-3266389 | Msa0584190:three_prime_UTR |
| CTGACGGCGGACAAGTCTCC+TGG | 0.546827 | 4_2:+3267946 | None:intergenic |
| AGTCTCAAGAGCAAGGCAAA+AGG | 0.546841 | 4_2:-3266620 | Msa0584190:CDS |
| CTCCCCTTCTCTGAACAAAA+CGG | 0.547500 | 4_2:-3270986 | Msa0584190:CDS |
| TTGATGGCAATTTGTTGGAG+TGG | 0.550035 | 4_2:-3268039 | Msa0584190:CDS |
| CCATCCAAATAACCATAGAA+AGG | 0.552132 | 4_2:-3269187 | Msa0584190:intron |
| CTTGTGGCAGGGCAGAAGTG+GGG | 0.552448 | 4_2:-3268349 | Msa0584190:intron |
| AACAAATTGCCATCAAACAA+TGG | 0.552812 | 4_2:+3268046 | None:intergenic |
| GTGGTCATAACCGGCCCCAC+CGG | 0.553825 | 4_2:-3271118 | Msa0584190:CDS |
| GTAGATCACATGATGGATGC+AGG | 0.554563 | 4_2:-3268241 | Msa0584190:CDS |
| TCTGAGCATTCGTGCTCAGA+TGG | 0.554916 | 4_2:+3266569 | None:intergenic |
| GCAGTGATCGGGTTCTTAGA+GGG | 0.558700 | 4_2:-3266697 | Msa0584190:CDS |
| TAAAATGGAATTAGATCGCA+GGG | 0.559383 | 4_2:-3266388 | Msa0584190:three_prime_UTR |
| TCTAAGAACCCGATCACTGC+AGG | 0.561716 | 4_2:+3266700 | None:intergenic |
| CATACACTATGTTGATTCCA+CGG | 0.564623 | 4_2:-3267498 | Msa0584190:CDS |
| CTACATATCTATCTAGCACT+GGG | 0.567510 | 4_2:+3268272 | None:intergenic |
| CCACCCAAAACAACCAAAAG+TGG | 0.569560 | 4_2:-3271140 | Msa0584190:CDS |
| AAGATATGGATCGCTTGTCA+TGG | 0.578301 | 4_2:-3266522 | Msa0584190:three_prime_UTR |
| AGATAGATATGTAGAGCAGA+GGG | 0.579087 | 4_2:-3268263 | Msa0584190:CDS |
| GAGGCCACTGTAGACTTGCA+TGG | 0.588760 | 4_2:+3271027 | None:intergenic |
| GGCAAAAGGTCTTAGTTCTG+TGG | 0.592242 | 4_2:-3266606 | Msa0584190:CDS |
| TTATACCAGAGGTTTGCGAC+AGG | 0.593044 | 4_2:-3268176 | Msa0584190:CDS |
| GATCCATATCTTTCATATCA+GGG | 0.596307 | 4_2:+3266533 | None:intergenic |
| AGTATGGAATAGACAAGTGG+TGG | 0.597956 | 4_2:-3267357 | Msa0584190:CDS |
| AACAGCATATACGCGGTCGT+GGG | 0.601681 | 4_2:-3266661 | Msa0584190:CDS |
| TGGGACGAAAATAATCCAAA+GGG | 0.607622 | 4_2:-3267255 | Msa0584190:CDS |
| ACAAGCTTCCATTCTCACTC+AGG | 0.613267 | 4_2:+3267306 | None:intergenic |
| TAGATAGATATGTAGAGCAG+AGG | 0.614018 | 4_2:-3268264 | Msa0584190:CDS |
| CTGGGACGAAAATAATCCAA+AGG | 0.619151 | 4_2:-3267256 | Msa0584190:CDS |
| TATTTCTAGTCTCAAGAGCA+AGG | 0.621557 | 4_2:-3266627 | Msa0584190:CDS |
| TTGGGATGTCAAATGGCACT+GGG | 0.629926 | 4_2:-3267274 | Msa0584190:CDS |
| ATGAATGCAGATTATACCAG+AGG | 0.643969 | 4_2:-3268187 | Msa0584190:CDS |
| CTGGACTCAATACACATGCA+AGG | 0.646107 | 4_2:-3267228 | Msa0584190:intron |
| CTTCTCTGAACAAAACGGTG+TGG | 0.647710 | 4_2:-3270981 | Msa0584190:CDS |
| AGAAAGTAAAGGTTAATACC+AGG | 0.649086 | 4_2:-3267964 | Msa0584190:CDS |
| GCAGAGGGTAGATCACATGA+TGG | 0.650378 | 4_2:-3268248 | Msa0584190:CDS |
| AAACAAGCAAACAATGACGA+CGG | 0.652291 | 4_2:-3271188 | None:intergenic |
| TATTAAGTGATATGACAACT+GGG | 0.654565 | 4_2:+3266319 | None:intergenic |
| TACTTCGATGGGGAAGTGTG+AGG | 0.654992 | 4_2:+3271063 | None:intergenic |
| CCCAAAACAACCAAAAGTGG+TGG | 0.656500 | 4_2:-3271137 | Msa0584190:CDS |
| GATTCCATGCAAGTCTACAG+TGG | 0.657414 | 4_2:-3271031 | Msa0584190:CDS |
| TGAAGTATGGAATAGACAAG+TGG | 0.657466 | 4_2:-3267360 | Msa0584190:CDS |
| GAAGTGTGAGGCTAAATCGA+CGG | 0.664688 | 4_2:+3271075 | None:intergenic |
| AGTGCCATTTGACATCCCAA+AGG | 0.668646 | 4_2:+3267277 | None:intergenic |
| GTTTGTTGGTGAGAATATCG+AGG | 0.682479 | 4_2:+3271008 | None:intergenic |
| CAGCGTTGATTACTTCGATG+GGG | 0.689009 | 4_2:+3271053 | None:intergenic |
| TGCATGTGTATTGAGTCCAG+AGG | 0.718690 | 4_2:+3267231 | None:intergenic |
| GTTTCTGCTAGATGACTCGA+CGG | 0.724111 | 4_2:-3269425 | Msa0584190:CDS |
| GAATGGGAACAGCATATACG+CGG | 0.770894 | 4_2:-3266668 | Msa0584190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATGTTTATGATTTTAA+GGG | - | chr4_2:3268423-3268442 | Msa0584190:intron | 10.0% |
| !!! | TATAATTATAATGATTTTCT+TGG | - | chr4_2:3268756-3268775 | Msa0584190:intron | 10.0% |
| !! | GGTATATATTTAATATTTAA+AGG | - | chr4_2:3268814-3268833 | Msa0584190:intron | 10.0% |
| !!! | CTTTAATGTTTATGATTTTA+AGG | - | chr4_2:3268422-3268441 | Msa0584190:intron | 15.0% |
| !!! | TTTAGAATTATCTATTGATT+TGG | - | chr4_2:3270063-3270082 | Msa0584190:intron | 15.0% |
| !!! | ATTTGGATATTCTATATTTT+AGG | - | chr4_2:3270080-3270099 | Msa0584190:intron | 15.0% |
| !!! | TGTTTAAACTGAAAAATTTT+GGG | + | chr4_2:3270494-3270513 | None:intergenic | 15.0% |
| !!! | TTGTTTAAACTGAAAAATTT+TGG | + | chr4_2:3270495-3270514 | None:intergenic | 15.0% |
| !! | ATATAGAAACATATGTAAAA+TGG | - | chr4_2:3271069-3271088 | Msa0584190:CDS | 15.0% |
| !! | GATACTAAATAGTAAATTGA+AGG | + | chr4_2:3266807-3266826 | None:intergenic | 20.0% |
| !!! | TTTTAGGAACTAACTTTAAA+AGG | + | chr4_2:3267026-3267045 | None:intergenic | 20.0% |
| !! | TAGTTCCTAAAATATCTATT+TGG | - | chr4_2:3267034-3267053 | Msa0584190:intron | 20.0% |
| !! | TAGAAATAAAAAATAGAACC+TGG | + | chr4_2:3267979-3267998 | None:intergenic | 20.0% |
| !! | AGTTATTTGAATTTCTTAAC+CGG | - | chr4_2:3268532-3268551 | Msa0584190:intron | 20.0% |
| !!! | ATTTTTTAAAATTCAAACCC+TGG | - | chr4_2:3268840-3268859 | Msa0584190:CDS | 20.0% |
| !!! | TGGAAGTTTTTTTTTTTTGA+GGG | + | chr4_2:3268933-3268952 | None:intergenic | 20.0% |
| !!! | ATGGAAGTTTTTTTTTTTTG+AGG | + | chr4_2:3268934-3268953 | None:intergenic | 20.0% |
| !!! | TCTTGTCTTTTAAATAATGT+TGG | - | chr4_2:3269095-3269114 | Msa0584190:intron | 20.0% |
| !! | AAAAACAAAAATCAAAGAGA+GGG | - | chr4_2:3269366-3269385 | Msa0584190:intron | 20.0% |
| !!! | AACAAATGACATTAGTTTTA+CGG | + | chr4_2:3269558-3269577 | None:intergenic | 20.0% |
| !!! | TATTTACAGAACATTTCTTT+TGG | - | chr4_2:3269601-3269620 | Msa0584190:intron | 20.0% |
| !!! | AATATTGGCATTTTTGTTTT+TGG | - | chr4_2:3269742-3269761 | Msa0584190:intron | 20.0% |
| !!! | ATATTGGCATTTTTGTTTTT+GGG | - | chr4_2:3269743-3269762 | Msa0584190:intron | 20.0% |
| !! | TATAAAAGAAGTTTGATTCA+AGG | + | chr4_2:3270354-3270373 | None:intergenic | 20.0% |
| !! | TATCATCAAAAGTTACAAAA+AGG | + | chr4_2:3271052-3271071 | None:intergenic | 20.0% |
| !!! | TATATGAGCTTTGAAACTTA+CGG | + | chr4_2:3266589-3266608 | None:intergenic | 25.0% |
| ! | TGGAACTAATTACTATATTC+AGG | - | chr4_2:3266717-3266736 | Msa0584190:intron | 25.0% |
| ! | TTAACAGTTTCTCTTATAGT+TGG | + | chr4_2:3267683-3267702 | None:intergenic | 25.0% |
| ! | CTAACTGTATGAATATAAGA+TGG | + | chr4_2:3268364-3268383 | None:intergenic | 25.0% |
| ! | GTTATTTGAATTTCTTAACC+GGG | - | chr4_2:3268533-3268552 | Msa0584190:intron | 25.0% |
| ! | TTATTTGAATTTCTTAACCG+GGG | - | chr4_2:3268534-3268553 | Msa0584190:intron | 25.0% |
| !! | ATAAACTCTTTTCCCTTATA+TGG | - | chr4_2:3268717-3268736 | Msa0584190:intron | 25.0% |
| !! | TAAACTCTTTTCCCTTATAT+GGG | - | chr4_2:3268718-3268737 | Msa0584190:intron | 25.0% |
| ! | TTGAAACAAATCCCATATAA+GGG | + | chr4_2:3268732-3268751 | None:intergenic | 25.0% |
| !! | TTTTTGAATTTTCCTTGGAA+TGG | + | chr4_2:3268787-3268806 | None:intergenic | 25.0% |
| !! | ACAAGTTTTTGAATTTTCCT+TGG | + | chr4_2:3268792-3268811 | None:intergenic | 25.0% |
| !! | GGAAAATTCAAAAACTTGTT+TGG | - | chr4_2:3268793-3268812 | Msa0584190:intron | 25.0% |
| ! | GAGAATAAAAATGAAGACAT+GGG | - | chr4_2:3268992-3269011 | Msa0584190:intron | 25.0% |
| !!! | TTCTAAAGCATTGATTCTAA+GGG | + | chr4_2:3269028-3269047 | None:intergenic | 25.0% |
| !!! | TTTCTAAAGCATTGATTCTA+AGG | + | chr4_2:3269029-3269048 | None:intergenic | 25.0% |
| !!! | TGATTGTTGTTTTATAAGTG+TGG | - | chr4_2:3269167-3269186 | Msa0584190:intron | 25.0% |
| ! | CAAAAACAAAAATCAAAGAG+AGG | - | chr4_2:3269365-3269384 | Msa0584190:intron | 25.0% |
| ! | AAAACAAAAATCAAAGAGAG+GGG | - | chr4_2:3269367-3269386 | Msa0584190:intron | 25.0% |
| !! | TACTAAATCTACAACTCTTT+TGG | - | chr4_2:3269473-3269492 | Msa0584190:intron | 25.0% |
| ! | ACTTTAAATGCTTCATCTAT+AGG | - | chr4_2:3269692-3269711 | Msa0584190:intron | 25.0% |
| !! | CATCTATAGGACAATTATTT+TGG | - | chr4_2:3269705-3269724 | Msa0584190:intron | 25.0% |
| !!! | TATAGGACAATTATTTTGGA+TGG | - | chr4_2:3269709-3269728 | Msa0584190:intron | 25.0% |
| !!! | ATAGGACAATTATTTTGGAT+GGG | - | chr4_2:3269710-3269729 | Msa0584190:intron | 25.0% |
| ! | TATATTTCTTCAAACTAGCA+TGG | + | chr4_2:3269872-3269891 | None:intergenic | 25.0% |
| ! | GAAAATTTACAAGATTGAGA+TGG | + | chr4_2:3270017-3270036 | None:intergenic | 25.0% |
| ! | TTTCCAGATAAACTTTAATC+TGG | + | chr4_2:3270457-3270476 | None:intergenic | 25.0% |
| ! | TATTAAGTGATATGACAACT+GGG | + | chr4_2:3271156-3271175 | None:intergenic | 25.0% |
| ! | TTATTAAGTGATATGACAAC+TGG | + | chr4_2:3271157-3271176 | None:intergenic | 25.0% |
| TTAGCAGTGAATTCCAAATT+CGG | + | chr4_2:3266543-3266562 | None:intergenic | 30.0% | |
| !! | ATATGAGCTTTGAAACTTAC+GGG | + | chr4_2:3266588-3266607 | None:intergenic | 30.0% |
| AATCACTTACCTGTTATTGT+TGG | - | chr4_2:3266694-3266713 | Msa0584190:CDS | 30.0% | |
| !! | TTTCTATAGTTCTGATTGCA+TGG | + | chr4_2:3266829-3266848 | None:intergenic | 30.0% |
| GCATCATGGAGTAATTTAAT+TGG | + | chr4_2:3267001-3267020 | None:intergenic | 30.0% | |
| ! | AACTTTAAAAGGTTGCATCA+TGG | + | chr4_2:3267015-3267034 | None:intergenic | 30.0% |
| ! | CCATGCCAAATAGATATTTT+AGG | + | chr4_2:3267042-3267061 | None:intergenic | 30.0% |
| CCTAAAATATCTATTTGGCA+TGG | - | chr4_2:3267039-3267058 | Msa0584190:intron | 30.0% | |
| TAATTTCTATGAACTGACAG+TGG | + | chr4_2:3267095-3267114 | None:intergenic | 30.0% | |
| TCGCGTAGCATAATAAAAAA+AGG | - | chr4_2:3267218-3267237 | Msa0584190:intron | 30.0% | |
| CGCGTAGCATAATAAAAAAA+GGG | - | chr4_2:3267219-3267238 | Msa0584190:intron | 30.0% | |
| TACAATACACCAAAAATGGT+GGG | + | chr4_2:3267293-3267312 | None:intergenic | 30.0% | |
| AACCTCTTGTGTAAAAAACA+GGG | + | chr4_2:3267326-3267345 | None:intergenic | 30.0% | |
| TATTATGCTACGCGATAAAA+GGG | + | chr4_2:3267419-3267438 | None:intergenic | 30.0% | |
| ATATTATGCTACGCGATAAA+AGG | + | chr4_2:3267420-3267439 | None:intergenic | 30.0% | |
| ATTGCAAATAGGAGATAGTT+TGG | - | chr4_2:3267586-3267605 | Msa0584190:intron | 30.0% | |
| TGACCAAATTCAATGTTTAG+TGG | - | chr4_2:3267609-3267628 | Msa0584190:intron | 30.0% | |
| TAGCCACTAAACATTGAATT+TGG | + | chr4_2:3267615-3267634 | None:intergenic | 30.0% | |
| GATTTGAGTGAAAGCTATTT+GGG | - | chr4_2:3268072-3268091 | Msa0584190:CDS | 30.0% | |
| ! | TGTAATTTTGTATGCATCAC+AGG | - | chr4_2:3268172-3268191 | Msa0584190:CDS | 30.0% |
| ! | GTAATTTTGTATGCATCACA+GGG | - | chr4_2:3268173-3268192 | Msa0584190:CDS | 30.0% |
| GCACTTTCAATTAATTTCTG+AGG | - | chr4_2:3268499-3268518 | Msa0584190:intron | 30.0% | |
| CTTGAAACAAATCCCATATA+AGG | + | chr4_2:3268733-3268752 | None:intergenic | 30.0% | |
| ! | CTTATATGGGATTTGTTTCA+AGG | - | chr4_2:3268731-3268750 | Msa0584190:intron | 30.0% |
| !!! | TTTTTTTGAGGGAATGAGAA+TGG | + | chr4_2:3268922-3268941 | None:intergenic | 30.0% |
| CGAGAATAAAAATGAAGACA+TGG | - | chr4_2:3268991-3269010 | Msa0584190:intron | 30.0% | |
| !!! | AATAATGTTGGTTTTGCTTG+TGG | - | chr4_2:3269107-3269126 | Msa0584190:intron | 30.0% |
| AACAAATTGCCATCAAACAA+TGG | + | chr4_2:3269429-3269448 | None:intergenic | 30.0% | |
| ! | ATTGTTTGATGGCAATTTGT+TGG | - | chr4_2:3269428-3269447 | Msa0584190:CDS | 30.0% |
| AGTTGTAGATTTAGTATCAG+GGG | + | chr4_2:3269469-3269488 | None:intergenic | 30.0% | |
| GAGTTGTAGATTTAGTATCA+GGG | + | chr4_2:3269470-3269489 | None:intergenic | 30.0% | |
| AGAGTTGTAGATTTAGTATC+AGG | + | chr4_2:3269471-3269490 | None:intergenic | 30.0% | |
| AGAAGCAATTGAGAAAGTAA+AGG | - | chr4_2:3269497-3269516 | Msa0584190:intron | 30.0% | |
| AGAAAGTAAAGGTTAATACC+AGG | - | chr4_2:3269508-3269527 | Msa0584190:intron | 30.0% | |
| !! | TCTTTTGGTTAGATATGCAA+TGG | - | chr4_2:3269616-3269635 | Msa0584190:intron | 30.0% |
| ! | ATTTTGTTCTCGATCTGTAA+TGG | - | chr4_2:3269827-3269846 | Msa0584190:intron | 30.0% |
| !! | CTTACTTAATATTGATTCCG+TGG | + | chr4_2:3269994-3270013 | None:intergenic | 30.0% |
| TAGGCAAATCAAATGAAGTA+TGG | - | chr4_2:3270099-3270118 | Msa0584190:intron | 30.0% | |
| GAATGTTGTTACTATCTTTG+TGG | + | chr4_2:3270147-3270166 | None:intergenic | 30.0% | |
| !! | TTTTCCTATCTGAAACAGAA+GGG | + | chr4_2:3270311-3270330 | None:intergenic | 30.0% |
| !! | ATTTTCCTATCTGAAACAGA+AGG | + | chr4_2:3270312-3270331 | None:intergenic | 30.0% |
| TTGCAATTTGTAGTAGAGAA+TGG | + | chr4_2:3270397-3270416 | None:intergenic | 30.0% | |
| TGCAACCAAGAAAATTTAAG+AGG | - | chr4_2:3270412-3270431 | Msa0584190:intron | 30.0% | |
| ! | AGCTTCCTCTTAAATTTTCT+TGG | + | chr4_2:3270420-3270439 | None:intergenic | 30.0% |
| CTACCAGATTAAAGTTTATC+TGG | - | chr4_2:3270451-3270470 | Msa0584190:intron | 30.0% | |
| !! | ATTCTGGCTCTTATATAGAT+AGG | - | chr4_2:3270649-3270668 | Msa0584190:intron | 30.0% |
| !! | TAATCGTTTTGAACATCCAT+AGG | - | chr4_2:3270692-3270711 | Msa0584190:intron | 30.0% |
| GATCCATATCTTTCATATCA+GGG | + | chr4_2:3270942-3270961 | None:intergenic | 30.0% | |
| TTGTCATGGAAAGATTTGTA+TGG | - | chr4_2:3270964-3270983 | Msa0584190:CDS | 30.0% | |
| AACAACTGTGCTTGATAAAA+AGG | + | chr4_2:3271001-3271020 | None:intergenic | 30.0% | |
| GTTACAAAAAGGATGATACA+TGG | + | chr4_2:3271041-3271060 | None:intergenic | 30.0% | |
| TAAAATGGAATTAGATCGCA+GGG | - | chr4_2:3271084-3271103 | Msa0584190:CDS | 30.0% | |
| TTAGTTCCACCAACAATAAC+AGG | + | chr4_2:3266706-3266725 | None:intergenic | 35.0% | |
| CTATATTCAGGTGCGAATTT+CGG | - | chr4_2:3266729-3266748 | Msa0584190:intron | 35.0% | |
| TATATTCAGGTGCGAATTTC+GGG | - | chr4_2:3266730-3266749 | Msa0584190:intron | 35.0% | |
| TCTATTTGGCATGGTTTGAT+CGG | - | chr4_2:3267048-3267067 | Msa0584190:intron | 35.0% | |
| GTACAATACACCAAAAATGG+TGG | + | chr4_2:3267294-3267313 | None:intergenic | 35.0% | |
| TGCGTACAATACACCAAAAA+TGG | + | chr4_2:3267297-3267316 | None:intergenic | 35.0% | |
| CTTGTGTAAAAAACAGGGTA+AGG | + | chr4_2:3267321-3267340 | None:intergenic | 35.0% | |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr4_2:3267321-3267340 | Msa0584190:CDS | 35.0% |
| CAACCTCTTGTGTAAAAAAC+AGG | + | chr4_2:3267327-3267346 | None:intergenic | 35.0% | |
| ATTATGCTACGCGATAAAAG+GGG | + | chr4_2:3267418-3267437 | None:intergenic | 35.0% | |
| ATGTTGTCAATCGCATAAAG+CGG | + | chr4_2:3267568-3267587 | None:intergenic | 35.0% | |
| CGATTGACAACATTGCAAAT+AGG | - | chr4_2:3267575-3267594 | Msa0584190:intron | 35.0% | |
| GCACACAAGGATAAGAAAAA+CGG | + | chr4_2:3267938-3267957 | None:intergenic | 35.0% | |
| CGATTTGAGTGAAAGCTATT+TGG | - | chr4_2:3268071-3268090 | Msa0584190:CDS | 35.0% | |
| CCTTTCTATGGTTATTTGGA+TGG | + | chr4_2:3268288-3268307 | None:intergenic | 35.0% | |
| CCATCCAAATAACCATAGAA+AGG | - | chr4_2:3268285-3268304 | Msa0584190:CDS | 35.0% | |
| CTGACCTTTCTATGGTTATT+TGG | + | chr4_2:3268292-3268311 | None:intergenic | 35.0% | |
| TTACTCATCTGACCTTTCTA+TGG | + | chr4_2:3268300-3268319 | None:intergenic | 35.0% | |
| !! | ATTAGTTTGTACTCTCGAAC+TGG | - | chr4_2:3268609-3268628 | Msa0584190:intron | 35.0% |
| TGTCCTTGAAAAACTTTGCT+GGG | + | chr4_2:3268642-3268661 | None:intergenic | 35.0% | |
| !! | CAGAGGTTTGTTATCTTCTT+TGG | - | chr4_2:3268667-3268686 | Msa0584190:intron | 35.0% |
| GTTATCTTCTTTGGCATTCA+TGG | - | chr4_2:3268676-3268695 | Msa0584190:intron | 35.0% | |
| ! | TTTAAAATTCAAACCCTGGC+AGG | - | chr4_2:3268844-3268863 | Msa0584190:CDS | 35.0% |
| AACTTCCATTCTCATGTAAG+TGG | - | chr4_2:3268945-3268964 | Msa0584190:intron | 35.0% | |
| TCTTTCCACTTACATGAGAA+TGG | + | chr4_2:3268953-3268972 | None:intergenic | 35.0% | |
| GACAAGAAAAAAGACTGAAC+TGG | + | chr4_2:3269082-3269101 | None:intergenic | 35.0% | |
| CTACATATCTATCTAGCACT+GGG | + | chr4_2:3269203-3269222 | None:intergenic | 35.0% | |
| TCTACATATCTATCTAGCAC+TGG | + | chr4_2:3269204-3269223 | None:intergenic | 35.0% | |
| TAGATAGATATGTAGAGCAG+AGG | - | chr4_2:3269208-3269227 | Msa0584190:CDS | 35.0% | |
| AGATAGATATGTAGAGCAGA+GGG | - | chr4_2:3269209-3269228 | Msa0584190:CDS | 35.0% | |
| ATGAATGCAGATTATACCAG+AGG | - | chr4_2:3269285-3269304 | Msa0584190:intron | 35.0% | |
| TTAGAAGATCCTCAAATTCG+CGG | + | chr4_2:3269332-3269351 | None:intergenic | 35.0% | |
| AAGAGAGGGGAAAATAATTG+AGG | - | chr4_2:3269380-3269399 | Msa0584190:intron | 35.0% | |
| AGAGAGGGGAAAATAATTGA+GGG | - | chr4_2:3269381-3269400 | Msa0584190:intron | 35.0% | |
| AATAGTGAGCCATTGTTTGA+TGG | - | chr4_2:3269417-3269436 | Msa0584190:CDS | 35.0% | |
| ! | AGTTTTACGGTTTTACCTGA+CGG | + | chr4_2:3269545-3269564 | None:intergenic | 35.0% |
| ATGATTGCTTCAGAAAGTCA+TGG | + | chr4_2:3269581-3269600 | None:intergenic | 35.0% | |
| !!! | AGTTTTGTTCATGACAGAAG+AGG | - | chr4_2:3269916-3269935 | Msa0584190:intron | 35.0% |
| ACTGGAAACATTGTTTGGTT+GGG | - | chr4_2:3269950-3269969 | Msa0584190:intron | 35.0% | |
| !! | CATACACTATGTTGATTCCA+CGG | - | chr4_2:3269974-3269993 | Msa0584190:intron | 35.0% |
| TGAAGTATGGAATAGACAAG+TGG | - | chr4_2:3270112-3270131 | Msa0584190:intron | 35.0% | |
| TGGGACGAAAATAATCCAAA+GGG | - | chr4_2:3270217-3270236 | Msa0584190:intron | 35.0% | |
| ! | TTTCCTATCTGAAACAGAAG+GGG | + | chr4_2:3270310-3270329 | None:intergenic | 35.0% |
| ! | GTTTGACTTTATTCTCTACG+CGG | - | chr4_2:3270616-3270635 | Msa0584190:intron | 35.0% |
| ! | TTTGACTTTATTCTCTACGC+GGG | - | chr4_2:3270617-3270636 | Msa0584190:intron | 35.0% |
| TTCTTAGAGGGTTACATGAA+TGG | - | chr4_2:3270787-3270806 | Msa0584190:CDS | 35.0% | |
| TCTTAGAGGGTTACATGAAT+GGG | - | chr4_2:3270788-3270807 | Msa0584190:CDS | 35.0% | |
| !! | TATTTCTAGTCTCAAGAGCA+AGG | - | chr4_2:3270845-3270864 | Msa0584190:intron | 35.0% |
| TCACCCTGATATGAAAGATA+TGG | - | chr4_2:3270936-3270955 | Msa0584190:CDS | 35.0% | |
| CGATCCATATCTTTCATATC+AGG | + | chr4_2:3270943-3270962 | None:intergenic | 35.0% | |
| ! | GTTGTTCCTCTGGATATTTT+TGG | - | chr4_2:3271015-3271034 | Msa0584190:CDS | 35.0% |
| GTAAAATGGAATTAGATCGC+AGG | - | chr4_2:3271083-3271102 | Msa0584190:CDS | 35.0% | |
| !!! | CACTTTTGGTTGTTTTGGGT+GGG | + | chr4_2:3266334-3266353 | None:intergenic | 40.0% |
| !! | CCACCACTTTTGGTTGTTTT+GGG | + | chr4_2:3266338-3266357 | None:intergenic | 40.0% |
| !! | ACCACCACTTTTGGTTGTTT+TGG | + | chr4_2:3266339-3266358 | None:intergenic | 40.0% |
| !! | TCAGCGTTGATTACTTCGAT+GGG | + | chr4_2:3266423-3266442 | None:intergenic | 40.0% |
| !! | ATCAGCGTTGATTACTTCGA+TGG | + | chr4_2:3266424-3266443 | None:intergenic | 40.0% |
| ! | GTTTGTTGGTGAGAATATCG+AGG | + | chr4_2:3266467-3266486 | None:intergenic | 40.0% |
| !! | ACACCGTTTTGTTCAGAGAA+GGG | + | chr4_2:3266492-3266511 | None:intergenic | 40.0% |
| CACTTACCTGTTATTGTTGG+TGG | - | chr4_2:3266697-3266716 | Msa0584190:CDS | 40.0% | |
| TAGAAATGCAGTAATGCACG+TGG | + | chr4_2:3266782-3266801 | None:intergenic | 40.0% | |
| ATCGGATGCATGTGCAATAA+AGG | - | chr4_2:3267066-3267085 | Msa0584190:intron | 40.0% | |
| ! | TTACACAAGAGGTTGTTTCG+AGG | - | chr4_2:3267332-3267351 | Msa0584190:CDS | 40.0% |
| GTTGTTGTCATGTGACTGAA+AGG | + | chr4_2:3267372-3267391 | None:intergenic | 40.0% | |
| TTATGCTACGCGATAAAAGG+GGG | + | chr4_2:3267417-3267436 | None:intergenic | 40.0% | |
| !! | TCTATAGCTTTGTAGCACAG+TGG | - | chr4_2:3267520-3267539 | Msa0584190:CDS | 40.0% |
| AATCCTTATCCCAGTAAGTG+GGG | + | chr4_2:3267794-3267813 | None:intergenic | 40.0% | |
| CAATCCTTATCCCAGTAAGT+GGG | + | chr4_2:3267795-3267814 | None:intergenic | 40.0% | |
| GAACAGAATAGCAGTTTACC+AGG | + | chr4_2:3268105-3268124 | None:intergenic | 40.0% | |
| ! | TGGATTCTATTTGCTGCAAC+TGG | + | chr4_2:3268268-3268287 | None:intergenic | 40.0% |
| CTTGAGACAGTGTGTACAAA+AGG | - | chr4_2:3268338-3268357 | Msa0584190:intron | 40.0% | |
| TTGAATTTCTTAACCGGGGA+TGG | - | chr4_2:3268538-3268557 | Msa0584190:intron | 40.0% | |
| ! | CTTCCCAGCAAAGTTTTTCA+AGG | - | chr4_2:3268636-3268655 | Msa0584190:intron | 40.0% |
| CTGTCCTTGAAAAACTTTGC+TGG | + | chr4_2:3268643-3268662 | None:intergenic | 40.0% | |
| !!! | CAGCAAAGTTTTTCAAGGAC+AGG | - | chr4_2:3268641-3268660 | Msa0584190:intron | 40.0% |
| TTCTTGGAAATGCCATTCCA+AGG | - | chr4_2:3268772-3268791 | Msa0584190:intron | 40.0% | |
| !! | TTGATGGCAATTTGTTGGAG+TGG | - | chr4_2:3269433-3269452 | Msa0584190:CDS | 40.0% |
| AGTCGACTGGAAACATTGTT+TGG | - | chr4_2:3269945-3269964 | Msa0584190:intron | 40.0% | |
| GACTGGAAACATTGTTTGGT+TGG | - | chr4_2:3269949-3269968 | Msa0584190:intron | 40.0% | |
| AGTATGGAATAGACAAGTGG+TGG | - | chr4_2:3270115-3270134 | Msa0584190:intron | 40.0% | |
| ACAACATTCCTGAGTGAGAA+TGG | - | chr4_2:3270158-3270177 | Msa0584190:intron | 40.0% | |
| !! | TCAACCTTTGGGATGTCAAA+TGG | - | chr4_2:3270191-3270210 | Msa0584190:intron | 40.0% |
| CTGGGACGAAAATAATCCAA+AGG | - | chr4_2:3270216-3270235 | Msa0584190:intron | 40.0% | |
| AAATAATCCAAAGGGACCTC+TGG | - | chr4_2:3270225-3270244 | Msa0584190:intron | 40.0% | |
| AGTGTTGCAACAAGATCCTA+TGG | + | chr4_2:3270711-3270730 | None:intergenic | 40.0% | |
| CTTATGACCTTTCTGTTGAC+AGG | - | chr4_2:3270749-3270768 | Msa0584190:intron | 40.0% | |
| AAGATATGGATCGCTTGTCA+TGG | - | chr4_2:3270950-3270969 | Msa0584190:CDS | 40.0% | |
| ACATGGCCAAAAATATCCAG+AGG | + | chr4_2:3271024-3271043 | None:intergenic | 40.0% | |
| GTGGGTAGGGTTTATTGTTG+CGG | + | chr4_2:3266316-3266335 | None:intergenic | 45.0% | |
| !!! | TTGGTTGTTTTGGGTGGGTA+GGG | + | chr4_2:3266329-3266348 | None:intergenic | 45.0% |
| !!! | TTTGGTTGTTTTGGGTGGGT+AGG | + | chr4_2:3266330-3266349 | None:intergenic | 45.0% |
| !!! | CCACTTTTGGTTGTTTTGGG+TGG | + | chr4_2:3266335-3266354 | None:intergenic | 45.0% |
| CCACCCAAAACAACCAAAAG+TGG | - | chr4_2:3266332-3266351 | Msa0584190:three_prime_UTR | 45.0% | |
| CCCAAAACAACCAAAAGTGG+TGG | - | chr4_2:3266335-3266354 | Msa0584190:three_prime_UTR | 45.0% | |
| CCAAAAGTGGTGGTCATAAC+CGG | - | chr4_2:3266345-3266364 | Msa0584190:three_prime_UTR | 45.0% | |
| !!! | GAGTTTTGATTTTCCGGAGC+CGG | + | chr4_2:3266376-3266395 | None:intergenic | 45.0% |
| !!! | GACGGCGAGTTTTGATTTTC+CGG | + | chr4_2:3266382-3266401 | None:intergenic | 45.0% |
| GAAGTGTGAGGCTAAATCGA+CGG | + | chr4_2:3266400-3266419 | None:intergenic | 45.0% | |
| !! | CAGCGTTGATTACTTCGATG+GGG | + | chr4_2:3266422-3266441 | None:intergenic | 45.0% |
| GATTCCATGCAAGTCTACAG+TGG | - | chr4_2:3266441-3266460 | Msa0584190:three_prime_UTR | 45.0% | |
| TTCAGAGAAGGGGAGTTTGT+TGG | + | chr4_2:3266481-3266500 | None:intergenic | 45.0% | |
| CTCCCCTTCTCTGAACAAAA+CGG | - | chr4_2:3266486-3266505 | Msa0584190:three_prime_UTR | 45.0% | |
| !! | CACCGTTTTGTTCAGAGAAG+GGG | + | chr4_2:3266491-3266510 | None:intergenic | 45.0% |
| !! | CACACCGTTTTGTTCAGAGA+AGG | + | chr4_2:3266493-3266512 | None:intergenic | 45.0% |
| CTTCTCTGAACAAAACGGTG+TGG | - | chr4_2:3266491-3266510 | Msa0584190:three_prime_UTR | 45.0% | |
| GGTGTGGTGCATCATCTATT+GGG | - | chr4_2:3266507-3266526 | Msa0584190:three_prime_UTR | 45.0% | |
| ! | GGGTACTGTGAATCCGAATT+TGG | - | chr4_2:3266527-3266546 | Msa0584190:three_prime_UTR | 45.0% |
| AATCTCATTCGTCAGTCCCT+CGG | - | chr4_2:3267114-3267133 | Msa0584190:intron | 45.0% | |
| ! | TGCAGGAGCTTTAATGCACT+GGG | + | chr4_2:3267248-3267267 | None:intergenic | 45.0% |
| ! | ATGCAGGAGCTTTAATGCAC+TGG | + | chr4_2:3267249-3267268 | None:intergenic | 45.0% |
| ATTAAAGCTCCTGCATACGC+AGG | - | chr4_2:3267253-3267272 | Msa0584190:CDS | 45.0% | |
| TTAAAGCTCCTGCATACGCA+GGG | - | chr4_2:3267254-3267273 | Msa0584190:CDS | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | + | chr4_2:3267365-3267384 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | + | chr4_2:3267366-3267385 | None:intergenic | 45.0% | |
| CCAATCCTTATCCCAGTAAG+TGG | + | chr4_2:3267796-3267815 | None:intergenic | 45.0% | |
| CCACTTACTGGGATAAGGAT+TGG | - | chr4_2:3267793-3267812 | Msa0584190:intron | 45.0% | |
| TTCTCCCTGTTATGCTCTTC+AGG | - | chr4_2:3268011-3268030 | Msa0584190:CDS | 45.0% | |
| ! | AGAGCCTGAAGAGCATAACA+GGG | + | chr4_2:3268018-3268037 | None:intergenic | 45.0% |
| ! | AAGAGCCTGAAGAGCATAAC+AGG | + | chr4_2:3268019-3268038 | None:intergenic | 45.0% |
| GTTTCTGCTAGATGACTCGA+CGG | - | chr4_2:3268047-3268066 | Msa0584190:CDS | 45.0% | |
| ACGTGTAAATATGCCATCCC+CGG | + | chr4_2:3268554-3268573 | None:intergenic | 45.0% | |
| !!! | ATGTTGGTTTTGCTTGTGGC+AGG | - | chr4_2:3269111-3269130 | Msa0584190:intron | 45.0% |
| !!! | TGTTGGTTTTGCTTGTGGCA+GGG | - | chr4_2:3269112-3269131 | Msa0584190:intron | 45.0% |
| !! | GTAGATCACATGATGGATGC+AGG | - | chr4_2:3269231-3269250 | Msa0584190:CDS | 45.0% |
| TTATACCAGAGGTTTGCGAC+AGG | - | chr4_2:3269296-3269315 | Msa0584190:intron | 45.0% | |
| ! | TTTACGGTTTTACCTGACGG+CGG | + | chr4_2:3269542-3269561 | None:intergenic | 45.0% |
| GATGGGAGCTTGCACAATAT+TGG | - | chr4_2:3269727-3269746 | Msa0584190:intron | 45.0% | |
| ACAAGCTTCCATTCTCACTC+AGG | + | chr4_2:3270169-3270188 | None:intergenic | 45.0% | |
| GAAGCTTGTCGTCAACCTTT+GGG | - | chr4_2:3270180-3270199 | Msa0584190:intron | 45.0% | |
| !! | AGTGCCATTTGACATCCCAA+AGG | + | chr4_2:3270198-3270217 | None:intergenic | 45.0% |
| ! | TTTGGGATGTCAAATGGCAC+TGG | - | chr4_2:3270197-3270216 | Msa0584190:intron | 45.0% |
| TTGGGATGTCAAATGGCACT+GGG | - | chr4_2:3270198-3270217 | Msa0584190:intron | 45.0% | |
| TGCATGTGTATTGAGTCCAG+AGG | + | chr4_2:3270244-3270263 | None:intergenic | 45.0% | |
| CTGGACTCAATACACATGCA+AGG | - | chr4_2:3270244-3270263 | Msa0584190:intron | 45.0% | |
| !! | GCTATGTTCTAGAATCCACC+TGG | - | chr4_2:3270270-3270289 | Msa0584190:intron | 45.0% |
| TTACGCTAGTACAGCAGACA+CGG | + | chr4_2:3270548-3270567 | None:intergenic | 45.0% | |
| ACGCGGGTATACTTTGATTC+TGG | - | chr4_2:3270633-3270652 | Msa0584190:intron | 45.0% | |
| GAATGGGAACAGCATATACG+CGG | - | chr4_2:3270804-3270823 | Msa0584190:CDS | 45.0% | |
| AGTCTCAAGAGCAAGGCAAA+AGG | - | chr4_2:3270852-3270871 | Msa0584190:intron | 45.0% | |
| !! | GGCAAAAGGTCTTAGTTCTG+TGG | - | chr4_2:3270866-3270885 | Msa0584190:intron | 45.0% |
| ATCAAGCACAGTTGTTCCTC+TGG | - | chr4_2:3271005-3271024 | Msa0584190:CDS | 45.0% | |
| ! | CCGGTTATGACCACCACTTT+TGG | + | chr4_2:3266348-3266367 | None:intergenic | 50.0% |
| !! | TTTGATTTTCCGGAGCCGGT+GGG | + | chr4_2:3266372-3266391 | None:intergenic | 50.0% |
| !!! | TTTTGATTTTCCGGAGCCGG+TGG | + | chr4_2:3266373-3266392 | None:intergenic | 50.0% |
| ! | TACTTCGATGGGGAAGTGTG+AGG | + | chr4_2:3266412-3266431 | None:intergenic | 50.0% |
| CGGTGTGGTGCATCATCTAT+TGG | - | chr4_2:3266506-3266525 | Msa0584190:three_prime_UTR | 50.0% | |
| ! | GTCAGTCCCTCGGTTACTTT+CGG | - | chr4_2:3267124-3267143 | Msa0584190:intron | 50.0% |
| CCTAGTCCGAAAGTAACCGA+GGG | + | chr4_2:3267133-3267152 | None:intergenic | 50.0% | |
| TCCTAGTCCGAAAGTAACCG+AGG | + | chr4_2:3267134-3267153 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr4_2:3267388-3267407 | Msa0584190:intron | 50.0% | |
| GCGATAAAAGGGGGTAACCT+TGG | + | chr4_2:3267408-3267427 | None:intergenic | 50.0% | |
| !! | GGTCGGCTGCATCGATTAAA+CGG | + | chr4_2:3267773-3267792 | None:intergenic | 50.0% |
| CTTATCCCAGTAAGTGGGGT+CGG | + | chr4_2:3267790-3267809 | None:intergenic | 50.0% | |
| TGAAACAAGACGGGCACACA+AGG | + | chr4_2:3267951-3267970 | None:intergenic | 50.0% | |
| !! | TGTGTGCCCGTCTTGTTTCA+AGG | - | chr4_2:3267951-3267970 | Msa0584190:CDS | 50.0% |
| CTGGCACCTTGAAACAAGAC+GGG | + | chr4_2:3267960-3267979 | None:intergenic | 50.0% | |
| CCTGGCACCTTGAAACAAGA+CGG | + | chr4_2:3267961-3267980 | None:intergenic | 50.0% | |
| AGCTATTTGGGTGACTCACC+TGG | - | chr4_2:3268084-3268103 | Msa0584190:CDS | 50.0% | |
| !! | TTTTCAAGGACAGGCAGCAG+AGG | - | chr4_2:3268650-3268669 | Msa0584190:intron | 50.0% |
| ATTCAAACCCTGGCAGGAAG+AGG | - | chr4_2:3268850-3268869 | Msa0584190:CDS | 50.0% | |
| GCAGAGGGTAGATCACATGA+TGG | - | chr4_2:3269224-3269243 | Msa0584190:CDS | 50.0% | |
| CTCAAATTCGCGGACACCAA+TGG | + | chr4_2:3269322-3269341 | None:intergenic | 50.0% | |
| ! | CATTGGTGTCCGCGAATTTG+AGG | - | chr4_2:3269320-3269339 | Msa0584190:intron | 50.0% |
| GGAAGCTTGTCGTCAACCTT+TGG | - | chr4_2:3270179-3270198 | Msa0584190:intron | 50.0% | |
| ATTGAGTCCAGAGGTCCCTT+TGG | + | chr4_2:3270235-3270254 | None:intergenic | 50.0% | |
| !! | GTTCTAGAATCCACCTGGCA+CGG | - | chr4_2:3270275-3270294 | Msa0584190:intron | 50.0% |
| !! | TTCTAGAATCCACCTGGCAC+GGG | - | chr4_2:3270276-3270295 | Msa0584190:intron | 50.0% |
| TGGCCCCTTCTGTTTCAGAT+AGG | - | chr4_2:3270304-3270323 | Msa0584190:intron | 50.0% | |
| ATAGGAGCGAACGAGTGATG+TGG | - | chr4_2:3270667-3270686 | Msa0584190:intron | 50.0% | |
| TCTAAGAACCCGATCACTGC+AGG | + | chr4_2:3270775-3270794 | None:intergenic | 50.0% | |
| TGCAGTGATCGGGTTCTTAG+AGG | - | chr4_2:3270774-3270793 | Msa0584190:CDS | 50.0% | |
| GCAGTGATCGGGTTCTTAGA+GGG | - | chr4_2:3270775-3270794 | Msa0584190:CDS | 50.0% | |
| AACAGCATATACGCGGTCGT+GGG | - | chr4_2:3270811-3270830 | Msa0584190:intron | 50.0% | |
| TCTGAGCATTCGTGCTCAGA+TGG | + | chr4_2:3270906-3270925 | None:intergenic | 50.0% | |
| ! | TTGATTTTCCGGAGCCGGTG+GGG | + | chr4_2:3266371-3266390 | None:intergenic | 55.0% |
| GAGGCCACTGTAGACTTGCA+TGG | + | chr4_2:3266448-3266467 | None:intergenic | 55.0% | |
| ! | CCCTCGGTTACTTTCGGACT+AGG | - | chr4_2:3267130-3267149 | Msa0584190:intron | 55.0% |
| ! | AAAATGGTGGGACCCCTTCC+CGG | + | chr4_2:3267281-3267300 | None:intergenic | 55.0% |
| ! | GGAAGGGGTCCCACCATTTT+TGG | - | chr4_2:3267281-3267300 | Msa0584190:CDS | 55.0% |
| CGACCCCACTTACTGGGATA+AGG | - | chr4_2:3267788-3267807 | Msa0584190:intron | 55.0% | |
| !! | CCGTCTTGTTTCAAGGTGCC+AGG | - | chr4_2:3267958-3267977 | Msa0584190:CDS | 55.0% |
| AAACCCTGGCAGGAAGAGGT+GGG | - | chr4_2:3268854-3268873 | Msa0584190:CDS | 55.0% | |
| ATTCCCACCTCTTCCTGCCA+GGG | + | chr4_2:3268860-3268879 | None:intergenic | 55.0% | |
| AATTCCCACCTCTTCCTGCC+AGG | + | chr4_2:3268861-3268880 | None:intergenic | 55.0% | |
| GGCAGGAAGAGGTGGGAATT+AGG | - | chr4_2:3268861-3268880 | Msa0584190:CDS | 55.0% | |
| AATGGCCTGTCGCAAACCTC+TGG | + | chr4_2:3269304-3269323 | None:intergenic | 55.0% | |
| AGAGGTTTGCGACAGGCCAT+TGG | - | chr4_2:3269303-3269322 | Msa0584190:intron | 55.0% | |
| GAAGAGGATGCTCAGTCGAC+TGG | - | chr4_2:3269932-3269951 | Msa0584190:intron | 55.0% | |
| ! | TCTAGAATCCACCTGGCACG+GGG | - | chr4_2:3270277-3270296 | Msa0584190:intron | 55.0% |
| CTGCAGGCCTGTCAACAGAA+AGG | + | chr4_2:3270759-3270778 | None:intergenic | 55.0% | |
| GTTGACAGGCCTGCAGTGAT+CGG | - | chr4_2:3270763-3270782 | Msa0584190:CDS | 55.0% | |
| TTGACAGGCCTGCAGTGATC+GGG | - | chr4_2:3270764-3270783 | Msa0584190:CDS | 55.0% | |
| GAACAGCATATACGCGGTCG+TGG | - | chr4_2:3270810-3270829 | Msa0584190:intron | 55.0% | |
| ATGCAGCCGACCCCACTTAC+TGG | - | chr4_2:3267781-3267800 | Msa0584190:intron | 60.0% | |
| TGCAGCCGACCCCACTTACT+GGG | - | chr4_2:3267782-3267801 | Msa0584190:intron | 60.0% | |
| CAAACCCTGGCAGGAAGAGG+TGG | - | chr4_2:3268853-3268872 | Msa0584190:CDS | 60.0% | |
| TGCTTGTGGCAGGGCAGAAG+TGG | - | chr4_2:3269121-3269140 | Msa0584190:intron | 60.0% | |
| GCTTGTGGCAGGGCAGAAGT+GGG | - | chr4_2:3269122-3269141 | Msa0584190:intron | 60.0% | |
| CTTGTGGCAGGGCAGAAGTG+GGG | - | chr4_2:3269123-3269142 | Msa0584190:intron | 60.0% | |
| ! | TCCACCTGGCACGGGGTATT+TGG | - | chr4_2:3270284-3270303 | Msa0584190:intron | 60.0% |
| GTGGTCATAACCGGCCCCAC+CGG | - | chr4_2:3266354-3266373 | Msa0584190:three_prime_UTR | 65.0% | |
| GCTCCTGCATACGCAGGGTC+CGG | - | chr4_2:3267259-3267278 | Msa0584190:CDS | 65.0% | |
| CTCCTGCATACGCAGGGTCC+GGG | - | chr4_2:3267260-3267279 | Msa0584190:CDS | 65.0% | |
| TTCCCGGACCCTGCGTATGC+AGG | + | chr4_2:3267265-3267284 | None:intergenic | 65.0% | |
| TGCATACGCAGGGTCCGGGA+AGG | - | chr4_2:3267264-3267283 | Msa0584190:CDS | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr4_2:3267265-3267284 | Msa0584190:CDS | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr4_2:3267266-3267285 | Msa0584190:CDS | 65.0% | |
| GGGGGTAACCTTGGCGCAAC+TGG | + | chr4_2:3267399-3267418 | None:intergenic | 65.0% | |
| CTGACGGCGGACAAGTCTCC+TGG | + | chr4_2:3269529-3269548 | None:intergenic | 65.0% | |
| CAGGAGACTTGTCCGCCGTC+AGG | - | chr4_2:3269527-3269546 | Msa0584190:intron | 65.0% | |
| GCCAAATACCCCGTGCCAGG+TGG | + | chr4_2:3270288-3270307 | None:intergenic | 65.0% | |
| !! | ATAACCGGCCCCACCGGCTC+CGG | - | chr4_2:3266360-3266379 | Msa0584190:three_prime_UTR | 70.0% |
| ! | TTTTCCGGAGCCGGTGGGGC+CGG | + | chr4_2:3266367-3266386 | None:intergenic | 70.0% |
| GGGGCCAAATACCCCGTGCC+AGG | + | chr4_2:3270291-3270310 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 3266291 | 3271203 | 3266291 | ID=Msa0584190;Name=Msa0584190 |
| chr4_2 | mRNA | 3266291 | 3271203 | 3266291 | ID=Msa0584190-mRNA-1;Parent=Msa0584190;Name=Msa0584190-mRNA-1;_AED=0.14;_eAED=0.14;_QI=6|0.87|0.88|1|1|1|9|268|478 |
| chr4_2 | exon | 3266291 | 3266723 | 3266291 | ID=Msa0584190-mRNA-1:exon:946;Parent=Msa0584190-mRNA-1 |
| chr4_2 | exon | 3267229 | 3267392 | 3267229 | ID=Msa0584190-mRNA-1:exon:945;Parent=Msa0584190-mRNA-1 |
| chr4_2 | exon | 3267486 | 3267561 | 3267486 | ID=Msa0584190-mRNA-1:exon:944;Parent=Msa0584190-mRNA-1 |
| chr4_2 | exon | 3267946 | 3268356 | 3267946 | ID=Msa0584190-mRNA-1:exon:943;Parent=Msa0584190-mRNA-1 |
| chr4_2 | exon | 3268823 | 3268897 | 3268823 | ID=Msa0584190-mRNA-1:exon:942;Parent=Msa0584190-mRNA-1 |
| chr4_2 | exon | 3269188 | 3269300 | 3269188 | ID=Msa0584190-mRNA-1:exon:941;Parent=Msa0584190-mRNA-1 |
| chr4_2 | exon | 3269389 | 3269461 | 3269389 | ID=Msa0584190-mRNA-1:exon:940;Parent=Msa0584190-mRNA-1 |
| chr4_2 | exon | 3270756 | 3270824 | 3270756 | ID=Msa0584190-mRNA-1:exon:939;Parent=Msa0584190-mRNA-1 |
| chr4_2 | exon | 3270907 | 3271203 | 3270907 | ID=Msa0584190-mRNA-1:exon:938;Parent=Msa0584190-mRNA-1 |
| chr4_2 | five_prime_UTR | 3271198 | 3271203 | 3271198 | ID=Msa0584190-mRNA-1:five_prime_utr;Parent=Msa0584190-mRNA-1 |
| chr4_2 | CDS | 3270907 | 3271197 | 3270907 | ID=Msa0584190-mRNA-1:cds;Parent=Msa0584190-mRNA-1 |
| chr4_2 | CDS | 3270756 | 3270824 | 3270756 | ID=Msa0584190-mRNA-1:cds;Parent=Msa0584190-mRNA-1 |
| chr4_2 | CDS | 3269389 | 3269461 | 3269389 | ID=Msa0584190-mRNA-1:cds;Parent=Msa0584190-mRNA-1 |
| chr4_2 | CDS | 3269188 | 3269300 | 3269188 | ID=Msa0584190-mRNA-1:cds;Parent=Msa0584190-mRNA-1 |
| chr4_2 | CDS | 3268823 | 3268897 | 3268823 | ID=Msa0584190-mRNA-1:cds;Parent=Msa0584190-mRNA-1 |
| chr4_2 | CDS | 3267946 | 3268356 | 3267946 | ID=Msa0584190-mRNA-1:cds;Parent=Msa0584190-mRNA-1 |
| chr4_2 | CDS | 3267486 | 3267561 | 3267486 | ID=Msa0584190-mRNA-1:cds;Parent=Msa0584190-mRNA-1 |
| chr4_2 | CDS | 3267229 | 3267392 | 3267229 | ID=Msa0584190-mRNA-1:cds;Parent=Msa0584190-mRNA-1 |
| chr4_2 | CDS | 3266559 | 3266723 | 3266559 | ID=Msa0584190-mRNA-1:cds;Parent=Msa0584190-mRNA-1 |
| chr4_2 | three_prime_UTR | 3266291 | 3266558 | 3266291 | ID=Msa0584190-mRNA-1:three_prime_utr;Parent=Msa0584190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
