Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747260 | XP_003591150.1 | 91.667 | 168 | 3 | 1 | 1 | 157 | 1 | 168 | 2.47e-104 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747260 | sp|Q5J907|TCTP_ELAGV | 85.119 | 168 | 14 | 1 | 1 | 157 | 1 | 168 | 1.60e-99 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747260 | G7I8Q1 | 91.667 | 168 | 3 | 1 | 1 | 157 | 1 | 168 | 1.18e-104 | 305 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa0747260 | 0.836511 | 8.964575e-57 | -8.615850e-47 |
| Msa0014800 | Msa0747260 | 0.818326 | 2.077659e-52 | -8.615850e-47 |
| Msa0015090 | Msa0747260 | 0.812865 | 3.419233e-51 | -8.615850e-47 |
| Msa0020390 | Msa0747260 | 0.809316 | 2.009728e-50 | -8.615850e-47 |
| Msa0021210 | Msa0747260 | 0.817533 | 3.139698e-52 | -8.615850e-47 |
| Msa0023000 | Msa0747260 | 0.818922 | 1.521785e-52 | -8.615850e-47 |
| Msa0029850 | Msa0747260 | 0.815941 | 7.140804e-52 | -8.615850e-47 |
| Msa0032860 | Msa0747260 | 0.869565 | 2.815441e-66 | -8.615850e-47 |
| Msa0032880 | Msa0747260 | 0.881402 | 2.473191e-70 | -8.615850e-47 |
| Msa0037840 | Msa0747260 | 0.800223 | 1.593736e-48 | -8.615850e-47 |
| Msa0037880 | Msa0747260 | 0.822630 | 2.137815e-53 | -8.615850e-47 |
| Msa0038870 | Msa0747260 | 0.828140 | 1.060819e-54 | -8.615850e-47 |
| Msa0049750 | Msa0747260 | 0.816711 | 4.803190e-52 | -8.615850e-47 |
| Msa0051450 | Msa0747260 | 0.803048 | 4.198711e-49 | -8.615850e-47 |
| Msa0051860 | Msa0747260 | 0.814995 | 1.159627e-51 | -8.615850e-47 |
| Msa0065950 | Msa0747260 | 0.829665 | 4.533089e-55 | -8.615850e-47 |
| Msa0077180 | Msa0747260 | 0.818651 | 1.753689e-52 | -8.615850e-47 |
| Msa0084430 | Msa0747260 | 0.807205 | 5.662810e-50 | -8.615850e-47 |
| Msa0086420 | Msa0747260 | 0.823808 | 1.134595e-53 | -8.615850e-47 |
| Msa0089820 | Msa0747260 | 0.800590 | 1.342095e-48 | -8.615850e-47 |
| Msa0090390 | Msa0747260 | 0.802673 | 5.018692e-49 | -8.615850e-47 |
| Msa0096980 | Msa0747260 | 0.839460 | 1.564227e-57 | -8.615850e-47 |
| Msa0101830 | Msa0747260 | 0.804472 | 2.124783e-49 | -8.615850e-47 |
| Msa0108560 | Msa0747260 | 0.817355 | 3.442234e-52 | -8.615850e-47 |
| Msa0109590 | Msa0747260 | 0.800967 | 1.124269e-48 | -8.615850e-47 |
| Msa0114430 | Msa0747260 | 0.810966 | 8.863653e-51 | -8.615850e-47 |
| Msa0118540 | Msa0747260 | 0.819251 | 1.281449e-52 | -8.615850e-47 |
| Msa0120340 | Msa0747260 | 0.802345 | 5.862897e-49 | -8.615850e-47 |
| Msa0608160 | Msa0747260 | 0.802899 | 4.506014e-49 | -8.615850e-47 |
| Msa0610130 | Msa0747260 | 0.802308 | 5.967881e-49 | -8.615850e-47 |
| Msa0615490 | Msa0747260 | 0.801443 | 8.982319e-49 | -8.615850e-47 |
| Msa0628740 | Msa0747260 | 0.837406 | 5.296154e-57 | -8.615850e-47 |
| Msa0630950 | Msa0747260 | 0.825961 | 3.523278e-54 | -8.615850e-47 |
| Msa0631200 | Msa0747260 | 0.806641 | 7.452108e-50 | -8.615850e-47 |
| Msa0631990 | Msa0747260 | 0.802409 | 5.687905e-49 | -8.615850e-47 |
| Msa0648080 | Msa0747260 | 0.804022 | 2.637128e-49 | -8.615850e-47 |
| Msa0650190 | Msa0747260 | 0.840431 | 8.729376e-58 | -8.615850e-47 |
| Msa0653490 | Msa0747260 | 0.805666 | 1.195499e-49 | -8.615850e-47 |
| Msa0657460 | Msa0747260 | -0.812396 | 4.330173e-51 | -8.615850e-47 |
| Msa0666140 | Msa0747260 | 0.837887 | 3.987499e-57 | -8.615850e-47 |
| Msa0669190 | Msa0747260 | 0.806023 | 1.006082e-49 | -8.615850e-47 |
| Msa0670660 | Msa0747260 | 0.818072 | 2.371907e-52 | -8.615850e-47 |
| Msa0673470 | Msa0747260 | 0.829879 | 4.020814e-55 | -8.615850e-47 |
| Msa0698540 | Msa0747260 | 0.805530 | 1.276943e-49 | -8.615850e-47 |
| Msa0700230 | Msa0747260 | 0.821229 | 4.510841e-53 | -8.615850e-47 |
| Msa0704730 | Msa0747260 | 0.827359 | 1.634191e-54 | -8.615850e-47 |
| Msa0711790 | Msa0747260 | 0.805057 | 1.603837e-49 | -8.615850e-47 |
| Msa0713350 | Msa0747260 | 0.800258 | 1.567846e-48 | -8.615850e-47 |
| Msa0721280 | Msa0747260 | 0.800909 | 1.155172e-48 | -8.615850e-47 |
| Msa0722020 | Msa0747260 | 0.800707 | 1.270132e-48 | -8.615850e-47 |
| Msa0723110 | Msa0747260 | 0.826540 | 2.565069e-54 | -8.615850e-47 |
| Msa0726830 | Msa0747260 | 0.826427 | 2.728695e-54 | -8.615850e-47 |
| Msa0732880 | Msa0747260 | 0.805824 | 1.107494e-49 | -8.615850e-47 |
| Msa0747260 | Msa0747270 | 0.860251 | 2.352909e-63 | -8.615850e-47 |
| Msa0747260 | Msa0751210 | 0.821237 | 4.492592e-53 | -8.615850e-47 |
| Msa0747260 | Msa0754920 | 0.805915 | 1.060067e-49 | -8.615850e-47 |
| Msa0747260 | Msa0763890 | 0.800550 | 1.367164e-48 | -8.615850e-47 |
| Msa0747260 | Msa0765180 | 0.807904 | 4.023530e-50 | -8.615850e-47 |
| Msa0747260 | Msa0769980 | 0.817229 | 3.675438e-52 | -8.615850e-47 |
| Msa0747260 | Msa0771720 | 0.800304 | 1.534805e-48 | -8.615850e-47 |
| Msa0747260 | Msa0773850 | 0.812520 | 4.067396e-51 | -8.615850e-47 |
| Msa0747260 | Msa0788540 | 0.803147 | 4.005718e-49 | -8.615850e-47 |
| Msa0747260 | Msa0793240 | 0.867892 | 9.789069e-66 | -8.615850e-47 |
| Msa0747260 | Msa0801740 | 0.822471 | 2.327703e-53 | -8.615850e-47 |
| Msa0747260 | Msa0820850 | 0.803099 | 4.096530e-49 | -8.615850e-47 |
| Msa0747260 | Msa0831590 | 0.818207 | 2.210991e-52 | -8.615850e-47 |
| Msa0747260 | Msa0843250 | 0.816136 | 6.459403e-52 | -8.615850e-47 |
| Msa0747260 | Msa0864470 | -0.819434 | 1.163818e-52 | -8.615850e-47 |
| Msa0747260 | Msa0869120 | 0.821201 | 4.579299e-53 | -8.615850e-47 |
| Msa0747260 | Msa0872440 | 0.801719 | 7.883626e-49 | -8.615850e-47 |
| Msa0747260 | Msa0876850 | -0.811098 | 8.297330e-51 | -8.615850e-47 |
| Msa0747260 | Msa0879860 | 0.827740 | 1.324138e-54 | -8.615850e-47 |
| Msa0747260 | Msa0890550 | 0.808226 | 3.436569e-50 | -8.615850e-47 |
| Msa0747260 | Msa0891600 | -0.816309 | 5.909928e-52 | -8.615850e-47 |
| Msa0747260 | Msa0930140 | 0.833424 | 5.375450e-56 | -8.615850e-47 |
| Msa0747260 | Msa0935850 | 0.802164 | 6.388284e-49 | -8.615850e-47 |
| Msa0747260 | Msa0937330 | 0.807562 | 4.757991e-50 | -8.615850e-47 |
| Msa0747260 | Msa0942550 | -0.805837 | 1.100650e-49 | -8.615850e-47 |
| Msa0747260 | Msa0942560 | -0.811431 | 7.024261e-51 | -8.615850e-47 |
| Msa0747260 | Msa0945120 | 0.805138 | 1.542726e-49 | -8.615850e-47 |
| Msa0747260 | Msa0982270 | 0.844437 | 7.563389e-59 | -8.615850e-47 |
| Msa0747260 | Msa0990580 | 0.801962 | 7.030445e-49 | -8.615850e-47 |
| Msa0747260 | Msa0992490 | -0.804645 | 1.955309e-49 | -8.615850e-47 |
| Msa0747260 | Msa0994370 | 0.833688 | 4.618555e-56 | -8.615850e-47 |
| Msa0747260 | Msa0999050 | -0.817787 | 2.751083e-52 | -8.615850e-47 |
| Msa0747260 | Msa1012830 | 0.838198 | 3.316016e-57 | -8.615850e-47 |
| Msa0747260 | Msa1023180 | 0.830562 | 2.739227e-55 | -8.615850e-47 |
| Msa0747260 | Msa1023920 | 0.802858 | 4.595023e-49 | -8.615850e-47 |
| Msa0747260 | Msa1029080 | -0.822396 | 2.423089e-53 | -8.615850e-47 |
| Msa0747260 | Msa1043050 | 0.837851 | 4.071562e-57 | -8.615850e-47 |
| Msa0747260 | Msa1053260 | 0.802791 | 4.745261e-49 | -8.615850e-47 |
| Msa0747260 | Msa1068870 | 0.814248 | 1.696907e-51 | -8.615850e-47 |
| Msa0747260 | Msa1080270 | 0.805532 | 1.275374e-49 | -8.615850e-47 |
| Msa0747260 | Msa1081790 | -0.800455 | 1.429784e-48 | -8.615850e-47 |
| Msa0747260 | Msa1090260 | 0.823352 | 1.450541e-53 | -8.615850e-47 |
| Msa0747260 | Msa1091940 | 0.806307 | 8.765549e-50 | -8.615850e-47 |
| Msa0747260 | Msa1094430 | 0.806158 | 9.424950e-50 | -8.615850e-47 |
| Msa0747260 | Msa1105190 | 0.801137 | 1.037761e-48 | -8.615850e-47 |
| Msa0747260 | Msa1124540 | -0.816828 | 4.522860e-52 | -8.615850e-47 |
| Msa0747260 | Msa1133230 | 0.805138 | 1.542743e-49 | -8.615850e-47 |
| Msa0747260 | Msa1133250 | 0.800551 | 1.366756e-48 | -8.615850e-47 |
| Msa0747260 | Msa1143930 | -0.828633 | 8.065945e-55 | -8.615850e-47 |
| Msa0747260 | Msa1150710 | 0.829125 | 6.131928e-55 | -8.615850e-47 |
| Msa0747260 | Msa1156170 | -0.817918 | 2.569775e-52 | -8.615850e-47 |
| Msa0747260 | Msa1163870 | 0.804163 | 2.464481e-49 | -8.615850e-47 |
| Msa0747260 | Msa1168040 | -0.807037 | 6.147952e-50 | -8.615850e-47 |
| Msa0747260 | Msa1174040 | 0.809695 | 1.666364e-50 | -8.615850e-47 |
| Msa0747260 | Msa1174310 | 0.811890 | 5.582538e-51 | -8.615850e-47 |
| Msa0747260 | Msa1176360 | 0.800058 | 1.721935e-48 | -8.615850e-47 |
| Msa0747260 | Msa1177780 | 0.817500 | 3.193005e-52 | -8.615850e-47 |
| Msa0747260 | Msa1183100 | -0.838995 | 2.064643e-57 | -8.615850e-47 |
| Msa0747260 | Msa1190930 | 0.822040 | 2.929711e-53 | -8.615850e-47 |
| Msa0747260 | Msa1202770 | -0.820798 | 5.670058e-53 | -8.615850e-47 |
| Msa0747260 | Msa1217430 | -0.828863 | 7.097428e-55 | -8.615850e-47 |
| Msa0747260 | Msa1224580 | -0.830122 | 3.508125e-55 | -8.615850e-47 |
| Msa0747260 | Msa1230080 | 0.814522 | 1.476142e-51 | -8.615850e-47 |
| Msa0747260 | Msa1233500 | 0.809054 | 2.286922e-50 | -8.615850e-47 |
| Msa0747260 | Msa1258380 | -0.842130 | 3.120788e-58 | -8.615850e-47 |
| Msa0747260 | Msa1263290 | -0.801854 | 7.397348e-49 | -8.615850e-47 |
| Msa0747260 | Msa1267260 | 0.801427 | 9.052692e-49 | -8.615850e-47 |
| Msa0747260 | Msa1267520 | 0.801754 | 7.757390e-49 | -8.615850e-47 |
| Msa0747260 | Msa1270660 | 0.825224 | 5.266756e-54 | -8.615850e-47 |
| Msa0747260 | Msa1270730 | 0.822384 | 2.437980e-53 | -8.615850e-47 |
| Msa0747260 | Msa1272620 | 0.808399 | 3.156341e-50 | -8.615850e-47 |
| Msa0747260 | Msa1276440 | 0.811389 | 7.176123e-51 | -8.615850e-47 |
| Msa0747260 | Msa1295330 | 0.800426 | 1.449116e-48 | -8.615850e-47 |
| Msa0747260 | Msa1295540 | -0.810824 | 9.513272e-51 | -8.615850e-47 |
| Msa0747260 | Msa1302190 | -0.826446 | 2.700652e-54 | -8.615850e-47 |
| Msa0747260 | Msa1305190 | 0.811494 | 6.809008e-51 | -8.615850e-47 |
| Msa0747260 | Msa1305340 | 0.807056 | 6.089907e-50 | -8.615850e-47 |
| Msa0747260 | Msa1307740 | 0.844128 | 9.156852e-59 | -8.615850e-47 |
| Msa0747260 | Msa1310400 | 0.825930 | 3.583068e-54 | -8.615850e-47 |
| Msa0747260 | Msa1314770 | 0.808065 | 3.719527e-50 | -8.615850e-47 |
| Msa0747260 | Msa1333420 | 0.808658 | 2.778932e-50 | -8.615850e-47 |
| Msa0747260 | Msa1345220 | 0.815798 | 7.684124e-52 | -8.615850e-47 |
| Msa0747260 | Msa1348600 | 0.860591 | 1.856986e-63 | -8.615850e-47 |
| Msa0747260 | Msa1348850 | 0.809616 | 1.733173e-50 | -8.615850e-47 |
| Msa0747260 | Msa1357430 | 0.822513 | 2.275205e-53 | -8.615850e-47 |
| Msa0747260 | Msa1357890 | 0.807106 | 5.944317e-50 | -8.615850e-47 |
| Msa0747260 | Msa1364830 | 0.807507 | 4.887546e-50 | -8.615850e-47 |
| Msa0747260 | Msa1366650 | 0.803246 | 3.820870e-49 | -8.615850e-47 |
| Msa0747260 | Msa1372580 | 0.814860 | 1.242238e-51 | -8.615850e-47 |
| Msa0747260 | Msa1392160 | -0.834553 | 2.804316e-56 | -8.615850e-47 |
| Msa0747260 | Msa1397120 | 0.829270 | 5.653936e-55 | -8.615850e-47 |
| Msa0747260 | Msa1398090 | 0.801345 | 9.409249e-49 | -8.615850e-47 |
| Msa0747260 | Msa1403340 | 0.838578 | 2.646107e-57 | -8.615850e-47 |
| Msa0747260 | Msa1403890 | 0.819879 | 9.212180e-53 | -8.615850e-47 |
| Msa0747260 | Msa1412930 | -0.803465 | 3.442100e-49 | -8.615850e-47 |
| Msa0747260 | Msa1419990 | 0.802530 | 5.369163e-49 | -8.615850e-47 |
| Msa0747260 | Msa1423910 | 0.815353 | 9.657331e-52 | -8.615850e-47 |
| Msa0747260 | Msa1443610 | 0.805850 | 1.094100e-49 | -8.615850e-47 |
| Msa0747260 | Msa1444250 | -0.853606 | 2.138930e-61 | -8.615850e-47 |
| Msa0747260 | Msa1445400 | -0.802574 | 5.259997e-49 | -8.615850e-47 |
| Msa0747260 | Msa1448630 | 0.839781 | 1.290194e-57 | -8.615850e-47 |
| Msa0747260 | Msa1449350 | -0.801733 | 7.832391e-49 | -8.615850e-47 |
| Msa0747260 | Msa1451620 | -0.819854 | 9.334074e-53 | -8.615850e-47 |
| Msa0747260 | Msa1453560 | 0.806205 | 9.210526e-50 | -8.615850e-47 |
| Msa0747260 | Msa1454950 | 0.829667 | 4.527320e-55 | -8.615850e-47 |
| Msa0747260 | Msa1458610 | 0.811165 | 8.023635e-51 | -8.615850e-47 |
| Msa0747260 | Msa1461280 | 0.802075 | 6.664376e-49 | -8.615850e-47 |
| Msa0747260 | Msa1462060 | 0.880277 | 6.265935e-70 | -8.615850e-47 |
| Msa0747260 | Msa1462070 | 0.843562 | 1.298452e-58 | -8.615850e-47 |
| Msa0747260 | Msa1465850 | 0.825987 | 3.473485e-54 | -8.615850e-47 |
| Msa0747260 | Msa1465960 | 0.805213 | 1.487714e-49 | -8.615850e-47 |
| Msa0124550 | Msa0747260 | 0.804378 | 2.223011e-49 | -8.615850e-47 |
| Msa0125050 | Msa0747260 | 0.804585 | 2.013176e-49 | -8.615850e-47 |
| Msa0137570 | Msa0747260 | 0.806696 | 7.258188e-50 | -8.615850e-47 |
| Msa0140510 | Msa0747260 | -0.806300 | 8.793869e-50 | -8.615850e-47 |
| Msa0145010 | Msa0747260 | 0.838526 | 2.729972e-57 | -8.615850e-47 |
| Msa0159770 | Msa0747260 | 0.801212 | 1.001564e-48 | -8.615850e-47 |
| Msa0169820 | Msa0747260 | 0.818177 | 2.245708e-52 | -8.615850e-47 |
| Msa0178860 | Msa0747260 | -0.818939 | 1.508822e-52 | -8.615850e-47 |
| Msa0183010 | Msa0747260 | -0.809748 | 1.622854e-50 | -8.615850e-47 |
| Msa0187060 | Msa0747260 | 0.822524 | 2.262072e-53 | -8.615850e-47 |
| Msa0187220 | Msa0747260 | 0.880714 | 4.371014e-70 | -8.615850e-47 |
| Msa0187230 | Msa0747260 | 0.873204 | 1.762540e-67 | -8.615850e-47 |
| Msa0187250 | Msa0747260 | 0.848637 | 5.400094e-60 | -8.615850e-47 |
| Msa0189520 | Msa0747260 | 0.825366 | 4.875120e-54 | -8.615850e-47 |
| Msa0206010 | Msa0747260 | 0.807864 | 4.104568e-50 | -8.615850e-47 |
| Msa0217680 | Msa0747260 | 0.820983 | 5.140288e-53 | -8.615850e-47 |
| Msa0219240 | Msa0747260 | 0.811267 | 7.624919e-51 | -8.615850e-47 |
| Msa0220440 | Msa0747260 | 0.822180 | 2.718418e-53 | -8.615850e-47 |
| Msa0226180 | Msa0747260 | 0.817328 | 3.490478e-52 | -8.615850e-47 |
| Msa0230560 | Msa0747260 | 0.808721 | 2.694111e-50 | -8.615850e-47 |
| Msa0230640 | Msa0747260 | -0.806353 | 8.571379e-50 | -8.615850e-47 |
| Msa0231790 | Msa0747260 | 0.807691 | 4.466052e-50 | -8.615850e-47 |
| Msa0233380 | Msa0747260 | 0.821910 | 3.140304e-53 | -8.615850e-47 |
| Msa0376910 | Msa0747260 | 0.826607 | 2.472413e-54 | -8.615850e-47 |
| Msa0385490 | Msa0747260 | 0.815225 | 1.030727e-51 | -8.615850e-47 |
| Msa0387280 | Msa0747260 | 0.815749 | 7.881418e-52 | -8.615850e-47 |
| Msa0388840 | Msa0747260 | 0.804103 | 2.536122e-49 | -8.615850e-47 |
| Msa0389810 | Msa0747260 | 0.840068 | 1.086185e-57 | -8.615850e-47 |
| Msa0392270 | Msa0747260 | 0.818727 | 1.685653e-52 | -8.615850e-47 |
| Msa0394340 | Msa0747260 | 0.865659 | 5.031817e-65 | -8.615850e-47 |
| Msa0412840 | Msa0747260 | 0.843492 | 1.355448e-58 | -8.615850e-47 |
| Msa0419640 | Msa0747260 | -0.838533 | 2.717101e-57 | -8.615850e-47 |
| Msa0429950 | Msa0747260 | 0.803718 | 3.049975e-49 | -8.615850e-47 |
| Msa0433410 | Msa0747260 | -0.823486 | 1.350072e-53 | -8.615850e-47 |
| Msa0433530 | Msa0747260 | 0.830903 | 2.259798e-55 | -8.615850e-47 |
| Msa0436190 | Msa0747260 | 0.830164 | 3.426303e-55 | -8.615850e-47 |
| Msa0438040 | Msa0747260 | 0.804472 | 2.125432e-49 | -8.615850e-47 |
| Msa0442200 | Msa0747260 | 0.857010 | 2.184183e-62 | -8.615850e-47 |
| Msa0442610 | Msa0747260 | 0.801206 | 1.004570e-48 | -8.615850e-47 |
| Msa0457510 | Msa0747260 | 0.844299 | 8.240349e-59 | -8.615850e-47 |
| Msa0468130 | Msa0747260 | 0.845861 | 3.117873e-59 | -8.615850e-47 |
| Msa0471900 | Msa0747260 | 0.827753 | 1.314679e-54 | -8.615850e-47 |
| Msa0472960 | Msa0747260 | -0.820905 | 5.356157e-53 | -8.615850e-47 |
| Msa0473830 | Msa0747260 | -0.809695 | 1.666364e-50 | -8.615850e-47 |
| Msa0477130 | Msa0747260 | -0.840461 | 8.576862e-58 | -8.615850e-47 |
| Msa0477260 | Msa0747260 | 0.841542 | 4.460105e-58 | -8.615850e-47 |
| Msa0482190 | Msa0747260 | -0.843208 | 1.614302e-58 | -8.615850e-47 |
| Msa0256330 | Msa0747260 | 0.802184 | 6.326767e-49 | -8.615850e-47 |
| Msa0257500 | Msa0747260 | 0.819514 | 1.115990e-52 | -8.615850e-47 |
| Msa0259210 | Msa0747260 | 0.800564 | 1.358422e-48 | -8.615850e-47 |
| Msa0261550 | Msa0747260 | 0.802045 | 6.757234e-49 | -8.615850e-47 |
| Msa0261720 | Msa0747260 | 0.839068 | 1.977005e-57 | -8.615850e-47 |
| Msa0271360 | Msa0747260 | 0.846738 | 1.798512e-59 | -8.615850e-47 |
| Msa0299580 | Msa0747260 | 0.827544 | 1.475354e-54 | -8.615850e-47 |
| Msa0303150 | Msa0747260 | 0.814147 | 1.786823e-51 | -8.615850e-47 |
| Msa0304840 | Msa0747260 | 0.806956 | 6.394791e-50 | -8.615850e-47 |
| Msa0307470 | Msa0747260 | 0.832899 | 7.262953e-56 | -8.615850e-47 |
| Msa0309880 | Msa0747260 | 0.801899 | 7.240680e-49 | -8.615850e-47 |
| Msa0311730 | Msa0747260 | 0.802901 | 4.501593e-49 | -8.615850e-47 |
| Msa0326110 | Msa0747260 | 0.802210 | 6.251125e-49 | -8.615850e-47 |
| Msa0336320 | Msa0747260 | 0.810123 | 1.348116e-50 | -8.615850e-47 |
| Msa0337060 | Msa0747260 | 0.825208 | 5.312125e-54 | -8.615850e-47 |
| Msa0341230 | Msa0747260 | 0.800427 | 1.448684e-48 | -8.615850e-47 |
| Msa0347610 | Msa0747260 | 0.855065 | 8.102160e-62 | -8.615850e-47 |
| Msa0485120 | Msa0747260 | 0.813612 | 2.343935e-51 | -8.615850e-47 |
| Msa0485500 | Msa0747260 | -0.838486 | 2.794200e-57 | -8.615850e-47 |
| Msa0488270 | Msa0747260 | 0.817195 | 3.740634e-52 | -8.615850e-47 |
| Msa0489610 | Msa0747260 | 0.861758 | 8.194245e-64 | -8.615850e-47 |
| Msa0500720 | Msa0747260 | 0.812663 | 3.786375e-51 | -8.615850e-47 |
| Msa0518070 | Msa0747260 | -0.809983 | 1.445100e-50 | -8.615850e-47 |
| Msa0521740 | Msa0747260 | 0.828525 | 8.566195e-55 | -8.615850e-47 |
| Msa0524600 | Msa0747260 | 0.830554 | 2.751038e-55 | -8.615850e-47 |
| Msa0534410 | Msa0747260 | 0.831199 | 1.911251e-55 | -8.615850e-47 |
| Msa0545080 | Msa0747260 | 0.820635 | 6.179349e-53 | -8.615850e-47 |
| Msa0549780 | Msa0747260 | 0.805726 | 1.161407e-49 | -8.615850e-47 |
| Msa0567240 | Msa0747260 | 0.804112 | 2.525620e-49 | -8.615850e-47 |
| Msa0568910 | Msa0747260 | 0.810215 | 1.287662e-50 | -8.615850e-47 |
| Msa0570330 | Msa0747260 | 0.837374 | 5.396809e-57 | -8.615850e-47 |
| Msa0575470 | Msa0747260 | 0.814062 | 1.865581e-51 | -8.615850e-47 |
| Msa0577120 | Msa0747260 | 0.833146 | 6.305859e-56 | -8.615850e-47 |
| Msa0584190 | Msa0747260 | 0.810755 | 9.844886e-51 | -8.615850e-47 |
| Msa0588240 | Msa0747260 | 0.840902 | 6.572332e-58 | -8.615850e-47 |
| Msa0590650 | Msa0747260 | 0.837654 | 4.575011e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747260 | MtrunA17_Chr1g0192201 | 91.667 | 168 | 3 | 1 | 1 | 157 | 1 | 168 | 2.27e-108 | 305 |
| Msa0747260 | MtrunA17_Chr1g0192171 | 91.071 | 168 | 4 | 1 | 1 | 157 | 1 | 168 | 1.87e-107 | 303 |
| Msa0747260 | MtrunA17_Chr2g0295871 | 80.357 | 168 | 21 | 2 | 1 | 157 | 1 | 167 | 1.02e-92 | 266 |
| Msa0747260 | MtrunA17_Chr6g0479151 | 75.155 | 161 | 28 | 2 | 1 | 150 | 1 | 160 | 3.31e-80 | 234 |
| Msa0747260 | MtrunA17_Chr1g0192161 | 76.744 | 129 | 19 | 1 | 19 | 136 | 9 | 137 | 2.02e-53 | 166 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747260 | AT3G16640.1 | 73.214 | 168 | 34 | 1 | 1 | 157 | 1 | 168 | 3.99e-85 | 247 |
| Msa0747260 | AT3G05540.1 | 74.556 | 169 | 30 | 3 | 1 | 157 | 1 | 168 | 8.19e-80 | 234 |
Find 43 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATATTGTTGACACTTTC+AGG | 0.110440 | 5_1:-70937015 | Msa0747260:CDS |
| TTATGTTACTCTAGTGATTT+TGG | 0.128436 | 5_1:-70936564 | Msa0747260:three_prime_UTR |
| TCCATTCTCAATTTCCTTGC+AGG | 0.264878 | 5_1:+70937281 | Msa0747250:intron |
| GTATACCAGGATCTTCTTAC+AGG | 0.300413 | 5_1:-70937895 | Msa0747260:intron |
| TGTTGACACTTTCAGGCTTC+AGG | 0.310211 | 5_1:-70937008 | Msa0747260:CDS |
| GTTGCTGACATCTAAATTAG+AGG | 0.319278 | 5_1:-70936930 | Msa0747260:CDS |
| ACACATTTAGTTATCATGTT+AGG | 0.353527 | 5_1:-70936599 | Msa0747260:three_prime_UTR |
| CTACTTTGCCTATGGCTTGA+AGG | 0.378916 | 5_1:-70936636 | Msa0747260:CDS |
| AACAATATCAACCACTTTGA+CGG | 0.381711 | 5_1:+70937027 | Msa0747250:intron |
| AATTGCTTCTTATCAAAAGC+TGG | 0.428621 | 5_1:+70936980 | Msa0747250:intron |
| CCTTGTGTTTGCTTACTACA+AGG | 0.455642 | 5_1:-70936684 | Msa0747260:CDS |
| GAATGGAATGTTGTGGGAAG+TGG | 0.459626 | 5_1:-70937265 | Msa0747260:CDS |
| CCATTCTCAATTTCCTTGCA+GGG | 0.465811 | 5_1:+70937282 | Msa0747250:intron |
| TAGGCAAAGTAGAGAAAAGT+TGG | 0.474181 | 5_1:+70936647 | Msa0747250:intron |
| TCGTCTCCACCCTCTGCAGA+AGG | 0.482179 | 5_1:+70937073 | Msa0747250:intron |
| TATTTGCAGTGGGTTGTTCA+AGG | 0.483236 | 5_1:-70937124 | Msa0747260:intron |
| AAGAAGAGAGAACTAAAAGA+AGG | 0.488362 | 5_1:+70937955 | Msa0747250:intron |
| CCCTGCAAGGAAATTGAGAA+TGG | 0.490398 | 5_1:-70937282 | Msa0747260:CDS |
| AGTGAGATTGAATAGAATAG+AGG | 0.498595 | 5_1:+70937998 | Msa0747250:intron |
| GGAGCAGTGGATGTGAATAT+TGG | 0.501116 | 5_1:-70937103 | Msa0747260:CDS |
| TGCAACCATGCTTGTATACC+AGG | 0.506466 | 5_1:-70937908 | Msa0747260:exon |
| GGTGCTAACCCTTCTGCAGA+GGG | 0.509467 | 5_1:-70937082 | Msa0747260:CDS |
| CTTGATTTCCTTCAAGCCAT+AGG | 0.517168 | 5_1:+70936628 | Msa0747250:intron |
| CTCTGACTCATTCCCCTGCA+AGG | 0.534349 | 5_1:-70937295 | Msa0747260:CDS |
| GTGTTTGCTTACTACAAGGA+TGG | 0.538874 | 5_1:-70936680 | Msa0747260:CDS |
| GGGGAGAGCATGCATGATGA+TGG | 0.565967 | 5_1:-70936710 | Msa0747260:CDS |
| CATTCTCAATTTCCTTGCAG+GGG | 0.578074 | 5_1:+70937283 | Msa0747250:intron |
| CGTCTCCACCCTCTGCAGAA+GGG | 0.579433 | 5_1:+70937074 | Msa0747250:intron |
| ATTTACCTGTAAGAAGATCC+TGG | 0.582754 | 5_1:+70937890 | Msa0747250:intron |
| GTTGTGGGAAGTGGAAGGAA+AGG | 0.585239 | 5_1:-70937256 | Msa0747260:intron |
| GAGATTGAATAGAATAGAGG+TGG | 0.587539 | 5_1:+70938001 | Msa0747250:intron |
| AATTGAGAATGGAATGTTGT+GGG | 0.593952 | 5_1:-70937271 | Msa0747260:CDS |
| TTCTGCAGAGGGTGGAGACG+AGG | 0.598044 | 5_1:-70937071 | Msa0747260:CDS |
| GCTAACCCTTCTGCAGAGGG+TGG | 0.604009 | 5_1:-70937079 | Msa0747260:CDS |
| GTAGAGAAAAGTTGGATCAG+TGG | 0.605758 | 5_1:+70936655 | Msa0747250:intron |
| GAGGGTGGAGACGAGGATGA+CGG | 0.612656 | 5_1:-70937064 | Msa0747260:CDS |
| AAGATCCTGGTATACAAGCA+TGG | 0.618624 | 5_1:+70937903 | Msa0747250:intron |
| TGGTGCTAACCCTTCTGCAG+AGG | 0.618744 | 5_1:-70937083 | Msa0747260:CDS |
| CCTTGTAGTAAGCAAACACA+AGG | 0.635355 | 5_1:+70936684 | Msa0747250:intron |
| GTGGGTTGTTCAAGGAGCAG+TGG | 0.636439 | 5_1:-70937116 | Msa0747260:CDS |
| GGAATGTTGTGGGAAGTGGA+AGG | 0.687071 | 5_1:-70937261 | Msa0747260:CDS |
| TGATGATCAAGCCGTCAAAG+TGG | 0.714042 | 5_1:-70937038 | Msa0747260:CDS |
| AAATTGAGAATGGAATGTTG+TGG | 0.718062 | 5_1:-70937272 | Msa0747260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTTAAAACTAAAGTG+AGG | + | chr5_1:70936748-70936767 | Msa0747250:intron | 15.0% |
| !!! | ATATTAGAGATTATTGTTTT+TGG | - | chr5_1:70937075-70937094 | Msa0747260:CDS | 15.0% |
| !! | CTAATTTATGAACATATATT+TGG | + | chr5_1:70937289-70937308 | Msa0747250:intron | 15.0% |
| !!! | TTATCTTTCATCTTTTTATT+TGG | - | chr5_1:70937648-70937667 | Msa0747260:intron | 15.0% |
| !!! | AATTATTTAAAACTAAAGTG+AGG | + | chr5_1:70936748-70936767 | Msa0747250:intron | 15.0% |
| !!! | ATATTAGAGATTATTGTTTT+TGG | - | chr5_1:70937075-70937094 | Msa0747260:CDS | 15.0% |
| !! | CTAATTTATGAACATATATT+TGG | + | chr5_1:70937289-70937308 | Msa0747250:intron | 15.0% |
| !!! | TTATCTTTCATCTTTTTATT+TGG | - | chr5_1:70937648-70937667 | Msa0747260:intron | 15.0% |
| !!! | TAAAACTTCTCTGTTTTTAT+GGG | + | chr5_1:70936846-70936865 | Msa0747250:intron | 20.0% |
| !!! | TTAAAACTTCTCTGTTTTTA+TGG | + | chr5_1:70936847-70936866 | Msa0747250:intron | 20.0% |
| !!! | ATAAAAACAGAGAAGTTTTA+AGG | - | chr5_1:70936846-70936865 | Msa0747260:intron | 20.0% |
| !! | TAAGAGATAATCATGTTTAA+GGG | + | chr5_1:70937004-70937023 | Msa0747250:intron | 20.0% |
| !! | TTAAGAGATAATCATGTTTA+AGG | + | chr5_1:70937005-70937024 | Msa0747250:intron | 20.0% |
| !! | CTTAATCTAATACTTGATTA+TGG | - | chr5_1:70937020-70937039 | Msa0747260:CDS | 20.0% |
| !! | TAGAAAGAAACATTATAGAA+AGG | + | chr5_1:70937245-70937264 | Msa0747250:intron | 20.0% |
| !! | GATGAAATACATAAAATTGT+AGG | + | chr5_1:70937627-70937646 | Msa0747250:intron | 20.0% |
| !!! | TAAAACTTCTCTGTTTTTAT+GGG | + | chr5_1:70936846-70936865 | Msa0747250:intron | 20.0% |
| !!! | TTAAAACTTCTCTGTTTTTA+TGG | + | chr5_1:70936847-70936866 | Msa0747250:intron | 20.0% |
| !!! | ATAAAAACAGAGAAGTTTTA+AGG | - | chr5_1:70936846-70936865 | Msa0747260:intron | 20.0% |
| !! | TAAGAGATAATCATGTTTAA+GGG | + | chr5_1:70937004-70937023 | Msa0747250:intron | 20.0% |
| !! | TTAAGAGATAATCATGTTTA+AGG | + | chr5_1:70937005-70937024 | Msa0747250:intron | 20.0% |
| !! | CTTAATCTAATACTTGATTA+TGG | - | chr5_1:70937020-70937039 | Msa0747260:CDS | 20.0% |
| !! | TAGAAAGAAACATTATAGAA+AGG | + | chr5_1:70937245-70937264 | Msa0747250:intron | 20.0% |
| !! | GATGAAATACATAAAATTGT+AGG | + | chr5_1:70937627-70937646 | Msa0747250:intron | 20.0% |
| ! | AAAAATCTCAAAGATGATGA+TGG | + | chr5_1:70936597-70936616 | Msa0747250:intron | 25.0% |
| !! | TCGTTTGTATTTCTTTTCAT+AGG | - | chr5_1:70936628-70936647 | Msa0747260:CDS | 25.0% |
| ! | GAAATTCATTCACTAAATAC+AGG | + | chr5_1:70936689-70936708 | Msa0747250:intron | 25.0% |
| ! | TTGTGACAGGATTAAATTTA+TGG | - | chr5_1:70936945-70936964 | Msa0747260:CDS | 25.0% |
| ! | ATTACACAACAATCAACTTT+AGG | + | chr5_1:70937312-70937331 | Msa0747250:intron | 25.0% |
| !!! | ATTAAGTTCTCTCTTTTTTG+TGG | - | chr5_1:70937675-70937694 | Msa0747260:intron | 25.0% |
| ! | ACACATTTAGTTATCATGTT+AGG | - | chr5_1:70937862-70937881 | Msa0747260:intron | 25.0% |
| !! | TTATGTTACTCTAGTGATTT+TGG | - | chr5_1:70937897-70937916 | Msa0747260:CDS | 25.0% |
| !! | TATGTTACTCTAGTGATTTT+GGG | - | chr5_1:70937898-70937917 | Msa0747260:CDS | 25.0% |
| !! | GAGTTTCGTATTTTCTAATT+AGG | - | chr5_1:70937953-70937972 | Msa0747260:five_prime_UTR | 25.0% |
| !! | ATTTATAGAGCTGATAATGA+AGG | + | chr5_1:70936435-70936454 | Msa0747250:intron | 25.0% |
| ! | AAAAATCTCAAAGATGATGA+TGG | + | chr5_1:70936597-70936616 | Msa0747250:intron | 25.0% |
| !! | TCGTTTGTATTTCTTTTCAT+AGG | - | chr5_1:70936628-70936647 | Msa0747260:CDS | 25.0% |
| ! | GAAATTCATTCACTAAATAC+AGG | + | chr5_1:70936689-70936708 | Msa0747250:intron | 25.0% |
| ! | TTGTGACAGGATTAAATTTA+TGG | - | chr5_1:70936945-70936964 | Msa0747260:CDS | 25.0% |
| ! | ATTACACAACAATCAACTTT+AGG | + | chr5_1:70937312-70937331 | Msa0747250:intron | 25.0% |
| !!! | ATTAAGTTCTCTCTTTTTTG+TGG | - | chr5_1:70937675-70937694 | Msa0747260:intron | 25.0% |
| ! | ACACATTTAGTTATCATGTT+AGG | - | chr5_1:70937862-70937881 | Msa0747260:intron | 25.0% |
| !! | TTATGTTACTCTAGTGATTT+TGG | - | chr5_1:70937897-70937916 | Msa0747260:CDS | 25.0% |
| !! | TATGTTACTCTAGTGATTTT+GGG | - | chr5_1:70937898-70937917 | Msa0747260:CDS | 25.0% |
| !! | GAGTTTCGTATTTTCTAATT+AGG | - | chr5_1:70937953-70937972 | Msa0747260:five_prime_UTR | 25.0% |
| AGTGAGATTGAATAGAATAG+AGG | + | chr5_1:70936466-70936485 | Msa0747250:intron | 30.0% | |
| AAGAAGAGAGAACTAAAAGA+AGG | + | chr5_1:70936509-70936528 | Msa0747250:intron | 30.0% | |
| ! | TTATGTTGTTTGTGTTCTGT+TGG | - | chr5_1:70936890-70936909 | Msa0747260:CDS | 30.0% |
| !!! | TTATTGTTTTTGGTTGCTGA+TGG | - | chr5_1:70937085-70937104 | Msa0747260:CDS | 30.0% |
| CTTTGCTGATGAATTTCTTT+AGG | - | chr5_1:70937131-70937150 | Msa0747260:intron | 30.0% | |
| AAATTGAGAATGGAATGTTG+TGG | - | chr5_1:70937189-70937208 | Msa0747260:intron | 30.0% | |
| AATTGAGAATGGAATGTTGT+GGG | - | chr5_1:70937190-70937209 | Msa0747260:intron | 30.0% | |
| TGTAATGTGATTATTTGCAG+TGG | - | chr5_1:70937326-70937345 | Msa0747260:intron | 30.0% | |
| GTAATGTGATTATTTGCAGT+GGG | - | chr5_1:70937327-70937346 | Msa0747260:intron | 30.0% | |
| AACAATATCAACCACTTTGA+CGG | + | chr5_1:70937437-70937456 | Msa0747250:intron | 30.0% | |
| TTGATATTGTTGACACTTTC+AGG | - | chr5_1:70937446-70937465 | Msa0747260:intron | 30.0% | |
| AATTGCTTCTTATCAAAAGC+TGG | + | chr5_1:70937484-70937503 | Msa0747250:intron | 30.0% | |
| !! | AATCAATGTTGCAGTTTTGT+TGG | - | chr5_1:70937730-70937749 | Msa0747260:intron | 30.0% |
| !!! | ATCAATGTTGCAGTTTTGTT+GGG | - | chr5_1:70937731-70937750 | Msa0747260:intron | 30.0% |
| AGTGAGATTGAATAGAATAG+AGG | + | chr5_1:70936466-70936485 | Msa0747250:intron | 30.0% | |
| AAGAAGAGAGAACTAAAAGA+AGG | + | chr5_1:70936509-70936528 | Msa0747250:intron | 30.0% | |
| ! | TTATGTTGTTTGTGTTCTGT+TGG | - | chr5_1:70936890-70936909 | Msa0747260:CDS | 30.0% |
| !!! | TTATTGTTTTTGGTTGCTGA+TGG | - | chr5_1:70937085-70937104 | Msa0747260:CDS | 30.0% |
| CTTTGCTGATGAATTTCTTT+AGG | - | chr5_1:70937131-70937150 | Msa0747260:intron | 30.0% | |
| AAATTGAGAATGGAATGTTG+TGG | - | chr5_1:70937189-70937208 | Msa0747260:intron | 30.0% | |
| AATTGAGAATGGAATGTTGT+GGG | - | chr5_1:70937190-70937209 | Msa0747260:intron | 30.0% | |
| TGTAATGTGATTATTTGCAG+TGG | - | chr5_1:70937326-70937345 | Msa0747260:intron | 30.0% | |
| GTAATGTGATTATTTGCAGT+GGG | - | chr5_1:70937327-70937346 | Msa0747260:intron | 30.0% | |
| AACAATATCAACCACTTTGA+CGG | + | chr5_1:70937437-70937456 | Msa0747250:intron | 30.0% | |
| TTGATATTGTTGACACTTTC+AGG | - | chr5_1:70937446-70937465 | Msa0747260:intron | 30.0% | |
| AATTGCTTCTTATCAAAAGC+TGG | + | chr5_1:70937484-70937503 | Msa0747250:intron | 30.0% | |
| !! | AATCAATGTTGCAGTTTTGT+TGG | - | chr5_1:70937730-70937749 | Msa0747260:intron | 30.0% |
| !!! | ATCAATGTTGCAGTTTTGTT+GGG | - | chr5_1:70937731-70937750 | Msa0747260:intron | 30.0% |
| GAGATTGAATAGAATAGAGG+TGG | + | chr5_1:70936463-70936482 | Msa0747250:intron | 35.0% | |
| ATTTACCTGTAAGAAGATCC+TGG | + | chr5_1:70936574-70936593 | Msa0747250:intron | 35.0% | |
| GTTGCTGACATCTAAATTAG+AGG | - | chr5_1:70937531-70937550 | Msa0747260:intron | 35.0% | |
| ATTGTAGGTCCTTGAGTTTA+GGG | + | chr5_1:70937612-70937631 | Msa0747250:intron | 35.0% | |
| AATTGTAGGTCCTTGAGTTT+AGG | + | chr5_1:70937613-70937632 | Msa0747250:intron | 35.0% | |
| !!! | TCAATGTTGCAGTTTTGTTG+GGG | - | chr5_1:70937732-70937751 | Msa0747260:intron | 35.0% |
| TAGGCAAAGTAGAGAAAAGT+TGG | + | chr5_1:70937817-70937836 | Msa0747250:intron | 35.0% | |
| ! | ACTTTTCTCTACTTTGCCTA+TGG | - | chr5_1:70937817-70937836 | Msa0747260:intron | 35.0% |
| !!! | CTCTAGTGATTTTGGGATTT+TGG | - | chr5_1:70937905-70937924 | Msa0747260:exon | 35.0% |
| GAGATTGAATAGAATAGAGG+TGG | + | chr5_1:70936463-70936482 | Msa0747250:intron | 35.0% | |
| ATTTACCTGTAAGAAGATCC+TGG | + | chr5_1:70936574-70936593 | Msa0747250:intron | 35.0% | |
| GTTGCTGACATCTAAATTAG+AGG | - | chr5_1:70937531-70937550 | Msa0747260:intron | 35.0% | |
| ATTGTAGGTCCTTGAGTTTA+GGG | + | chr5_1:70937612-70937631 | Msa0747250:intron | 35.0% | |
| AATTGTAGGTCCTTGAGTTT+AGG | + | chr5_1:70937613-70937632 | Msa0747250:intron | 35.0% | |
| !!! | TCAATGTTGCAGTTTTGTTG+GGG | - | chr5_1:70937732-70937751 | Msa0747260:intron | 35.0% |
| TAGGCAAAGTAGAGAAAAGT+TGG | + | chr5_1:70937817-70937836 | Msa0747250:intron | 35.0% | |
| ! | ACTTTTCTCTACTTTGCCTA+TGG | - | chr5_1:70937817-70937836 | Msa0747260:intron | 35.0% |
| !!! | CTCTAGTGATTTTGGGATTT+TGG | - | chr5_1:70937905-70937924 | Msa0747260:exon | 35.0% |
| AAGATCCTGGTATACAAGCA+TGG | + | chr5_1:70936561-70936580 | Msa0747250:intron | 40.0% | |
| GTATACCAGGATCTTCTTAC+AGG | - | chr5_1:70936566-70936585 | Msa0747260:three_prime_UTR | 40.0% | |
| TGTTGTGTTTGTGTTGTGAC+AGG | - | chr5_1:70936932-70936951 | Msa0747260:CDS | 40.0% | |
| CATTCTCAATTTCCTTGCAG+GGG | + | chr5_1:70937181-70937200 | Msa0747250:intron | 40.0% | |
| CCATTCTCAATTTCCTTGCA+GGG | + | chr5_1:70937182-70937201 | Msa0747250:intron | 40.0% | |
| TCCATTCTCAATTTCCTTGC+AGG | + | chr5_1:70937183-70937202 | Msa0747250:intron | 40.0% | |
| !! | TATTTGCAGTGGGTTGTTCA+AGG | - | chr5_1:70937337-70937356 | Msa0747260:intron | 40.0% |
| CCTTGTAGTAAGCAAACACA+AGG | + | chr5_1:70937780-70937799 | Msa0747250:intron | 40.0% | |
| CCTTGTGTTTGCTTACTACA+AGG | - | chr5_1:70937777-70937796 | Msa0747260:intron | 40.0% | |
| GTGTTTGCTTACTACAAGGA+TGG | - | chr5_1:70937781-70937800 | Msa0747260:intron | 40.0% | |
| GTAGAGAAAAGTTGGATCAG+TGG | + | chr5_1:70937809-70937828 | Msa0747250:intron | 40.0% | |
| CTTGATTTCCTTCAAGCCAT+AGG | + | chr5_1:70937836-70937855 | Msa0747250:intron | 40.0% | |
| AAGATCCTGGTATACAAGCA+TGG | + | chr5_1:70936561-70936580 | Msa0747250:intron | 40.0% | |
| GTATACCAGGATCTTCTTAC+AGG | - | chr5_1:70936566-70936585 | Msa0747260:three_prime_UTR | 40.0% | |
| TGTTGTGTTTGTGTTGTGAC+AGG | - | chr5_1:70936932-70936951 | Msa0747260:CDS | 40.0% | |
| CATTCTCAATTTCCTTGCAG+GGG | + | chr5_1:70937181-70937200 | Msa0747250:intron | 40.0% | |
| CCATTCTCAATTTCCTTGCA+GGG | + | chr5_1:70937182-70937201 | Msa0747250:intron | 40.0% | |
| TCCATTCTCAATTTCCTTGC+AGG | + | chr5_1:70937183-70937202 | Msa0747250:intron | 40.0% | |
| !! | TATTTGCAGTGGGTTGTTCA+AGG | - | chr5_1:70937337-70937356 | Msa0747260:intron | 40.0% |
| CCTTGTAGTAAGCAAACACA+AGG | + | chr5_1:70937780-70937799 | Msa0747250:intron | 40.0% | |
| CCTTGTGTTTGCTTACTACA+AGG | - | chr5_1:70937777-70937796 | Msa0747260:intron | 40.0% | |
| GTGTTTGCTTACTACAAGGA+TGG | - | chr5_1:70937781-70937800 | Msa0747260:intron | 40.0% | |
| GTAGAGAAAAGTTGGATCAG+TGG | + | chr5_1:70937809-70937828 | Msa0747250:intron | 40.0% | |
| CTTGATTTCCTTCAAGCCAT+AGG | + | chr5_1:70937836-70937855 | Msa0747250:intron | 40.0% | |
| TGCAACCATGCTTGTATACC+AGG | - | chr5_1:70936553-70936572 | Msa0747260:three_prime_UTR | 45.0% | |
| CCCTGCAAGGAAATTGAGAA+TGG | - | chr5_1:70937179-70937198 | Msa0747260:intron | 45.0% | |
| GAATGGAATGTTGTGGGAAG+TGG | - | chr5_1:70937196-70937215 | Msa0747260:intron | 45.0% | |
| GGAGCAGTGGATGTGAATAT+TGG | - | chr5_1:70937358-70937377 | Msa0747260:intron | 45.0% | |
| TGATGATCAAGCCGTCAAAG+TGG | - | chr5_1:70937423-70937442 | Msa0747260:intron | 45.0% | |
| TGTTGACACTTTCAGGCTTC+AGG | - | chr5_1:70937453-70937472 | Msa0747260:intron | 45.0% | |
| GTTCCTTCTCCCTAAACTCA+AGG | - | chr5_1:70937600-70937619 | Msa0747260:intron | 45.0% | |
| CTACTTTGCCTATGGCTTGA+AGG | - | chr5_1:70937825-70937844 | Msa0747260:intron | 45.0% | |
| TGCAACCATGCTTGTATACC+AGG | - | chr5_1:70936553-70936572 | Msa0747260:three_prime_UTR | 45.0% | |
| CCCTGCAAGGAAATTGAGAA+TGG | - | chr5_1:70937179-70937198 | Msa0747260:intron | 45.0% | |
| GAATGGAATGTTGTGGGAAG+TGG | - | chr5_1:70937196-70937215 | Msa0747260:intron | 45.0% | |
| GGAGCAGTGGATGTGAATAT+TGG | - | chr5_1:70937358-70937377 | Msa0747260:intron | 45.0% | |
| TGATGATCAAGCCGTCAAAG+TGG | - | chr5_1:70937423-70937442 | Msa0747260:intron | 45.0% | |
| TGTTGACACTTTCAGGCTTC+AGG | - | chr5_1:70937453-70937472 | Msa0747260:intron | 45.0% | |
| GTTCCTTCTCCCTAAACTCA+AGG | - | chr5_1:70937600-70937619 | Msa0747260:intron | 45.0% | |
| CTACTTTGCCTATGGCTTGA+AGG | - | chr5_1:70937825-70937844 | Msa0747260:intron | 45.0% | |
| GGAATGTTGTGGGAAGTGGA+AGG | - | chr5_1:70937200-70937219 | Msa0747260:intron | 50.0% | |
| GTTGTGGGAAGTGGAAGGAA+AGG | - | chr5_1:70937205-70937224 | Msa0747260:intron | 50.0% | |
| GGGAAGTGGAAGGAAAGGTT+AGG | - | chr5_1:70937210-70937229 | Msa0747260:intron | 50.0% | |
| GGTCCTTGAGTTTAGGGAGA+AGG | + | chr5_1:70937606-70937625 | Msa0747250:intron | 50.0% | |
| GGAATGTTGTGGGAAGTGGA+AGG | - | chr5_1:70937200-70937219 | Msa0747260:intron | 50.0% | |
| GTTGTGGGAAGTGGAAGGAA+AGG | - | chr5_1:70937205-70937224 | Msa0747260:intron | 50.0% | |
| GGGAAGTGGAAGGAAAGGTT+AGG | - | chr5_1:70937210-70937229 | Msa0747260:intron | 50.0% | |
| GGTCCTTGAGTTTAGGGAGA+AGG | + | chr5_1:70937606-70937625 | Msa0747250:intron | 50.0% | |
| CTCTGACTCATTCCCCTGCA+AGG | - | chr5_1:70937166-70937185 | Msa0747260:intron | 55.0% | |
| ! | GTGGGTTGTTCAAGGAGCAG+TGG | - | chr5_1:70937345-70937364 | Msa0747260:intron | 55.0% |
| ! | TGGTGCTAACCCTTCTGCAG+AGG | - | chr5_1:70937378-70937397 | Msa0747260:intron | 55.0% |
| GGTGCTAACCCTTCTGCAGA+GGG | - | chr5_1:70937379-70937398 | Msa0747260:intron | 55.0% | |
| ! | GGGGAGAGCATGCATGATGA+TGG | - | chr5_1:70937751-70937770 | Msa0747260:intron | 55.0% |
| CTCTGACTCATTCCCCTGCA+AGG | - | chr5_1:70937166-70937185 | Msa0747260:intron | 55.0% | |
| ! | GTGGGTTGTTCAAGGAGCAG+TGG | - | chr5_1:70937345-70937364 | Msa0747260:intron | 55.0% |
| ! | TGGTGCTAACCCTTCTGCAG+AGG | - | chr5_1:70937378-70937397 | Msa0747260:intron | 55.0% |
| GGTGCTAACCCTTCTGCAGA+GGG | - | chr5_1:70937379-70937398 | Msa0747260:intron | 55.0% | |
| ! | GGGGAGAGCATGCATGATGA+TGG | - | chr5_1:70937751-70937770 | Msa0747260:intron | 55.0% |
| GCTAACCCTTCTGCAGAGGG+TGG | - | chr5_1:70937382-70937401 | Msa0747260:intron | 60.0% | |
| CGTCTCCACCCTCTGCAGAA+GGG | + | chr5_1:70937390-70937409 | Msa0747250:intron | 60.0% | |
| TCGTCTCCACCCTCTGCAGA+AGG | + | chr5_1:70937391-70937410 | Msa0747250:intron | 60.0% | |
| TTCTGCAGAGGGTGGAGACG+AGG | - | chr5_1:70937390-70937409 | Msa0747260:intron | 60.0% | |
| GAGGGTGGAGACGAGGATGA+CGG | - | chr5_1:70937397-70937416 | Msa0747260:intron | 60.0% | |
| GCTAACCCTTCTGCAGAGGG+TGG | - | chr5_1:70937382-70937401 | Msa0747260:intron | 60.0% | |
| CGTCTCCACCCTCTGCAGAA+GGG | + | chr5_1:70937390-70937409 | Msa0747250:intron | 60.0% | |
| TCGTCTCCACCCTCTGCAGA+AGG | + | chr5_1:70937391-70937410 | Msa0747250:intron | 60.0% | |
| TTCTGCAGAGGGTGGAGACG+AGG | - | chr5_1:70937390-70937409 | Msa0747260:intron | 60.0% | |
| GAGGGTGGAGACGAGGATGA+CGG | - | chr5_1:70937397-70937416 | Msa0747260:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 70936433 | 70938050 | 70936433 | ID=Msa0747260;Name=Msa0747260 |
| chr5_1 | mRNA | 70936433 | 70938050 | 70936433 | ID=Msa0747260-mRNA-1;Parent=Msa0747260;Name=Msa0747260-mRNA-1;_AED=0.33;_eAED=0.33;_QI=127|0.66|0.75|1|1|1|4|189|157 |
| chr5_1 | exon | 70936433 | 70936739 | 70936433 | ID=Msa0747260-mRNA-1:exon:20995;Parent=Msa0747260-mRNA-1 |
| chr5_1 | exon | 70936884 | 70937137 | 70936884 | ID=Msa0747260-mRNA-1:exon:20994;Parent=Msa0747260-mRNA-1 |
| chr5_1 | exon | 70937257 | 70937330 | 70937257 | ID=Msa0747260-mRNA-1:exon:20993;Parent=Msa0747260-mRNA-1 |
| chr5_1 | exon | 70937896 | 70938050 | 70937896 | ID=Msa0747260-mRNA-1:exon:20992;Parent=Msa0747260-mRNA-1 |
| chr5_1 | five_prime_UTR | 70937924 | 70938050 | 70937924 | ID=Msa0747260-mRNA-1:five_prime_utr;Parent=Msa0747260-mRNA-1 |
| chr5_1 | CDS | 70937896 | 70937923 | 70937896 | ID=Msa0747260-mRNA-1:cds;Parent=Msa0747260-mRNA-1 |
| chr5_1 | CDS | 70937257 | 70937330 | 70937257 | ID=Msa0747260-mRNA-1:cds;Parent=Msa0747260-mRNA-1 |
| chr5_1 | CDS | 70936884 | 70937137 | 70936884 | ID=Msa0747260-mRNA-1:cds;Parent=Msa0747260-mRNA-1 |
| chr5_1 | CDS | 70936622 | 70936739 | 70936622 | ID=Msa0747260-mRNA-1:cds;Parent=Msa0747260-mRNA-1 |
| chr5_1 | three_prime_UTR | 70936433 | 70936621 | 70936433 | ID=Msa0747260-mRNA-1:three_prime_utr;Parent=Msa0747260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
