Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584710 | XP_013455470.1 | 97.245 | 871 | 23 | 1 | 1 | 871 | 1 | 870 | 0.0 | 1766 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584710 | sp|Q9UMN6|KMT2B_HUMAN | 32.727 | 220 | 122 | 9 | 141 | 353 | 1202 | 1402 | 5.27e-28 | 126 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0584710 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0584710 | Msa0584890 | 0.987579 | 9.023179e-171 | -8.615850e-47 |
| Msa0584710 | Msa0794140 | 0.821831 | 3.275818e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584710 | MtrunA17_Chr4g0019381 | 97.245 | 871 | 23 | 1 | 1 | 871 | 1 | 870 | 0.0 | 1766 |
| Msa0584710 | MtrunA17_Chr7g0275611 | 38.571 | 70 | 40 | 1 | 268 | 337 | 339 | 405 | 4.20e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584710 | AT3G08020.1 | 50.225 | 890 | 313 | 19 | 1 | 871 | 1 | 779 | 0.0 | 777 |
| Msa0584710 | AT3G52100.3 | 61.358 | 383 | 132 | 7 | 1 | 375 | 1 | 375 | 4.11e-159 | 481 |
| Msa0584710 | AT3G52100.3 | 44.279 | 201 | 81 | 5 | 681 | 871 | 499 | 678 | 1.80e-32 | 135 |
| Msa0584710 | AT3G52100.2 | 61.358 | 383 | 132 | 7 | 1 | 375 | 1 | 375 | 1.39e-158 | 479 |
| Msa0584710 | AT3G52100.2 | 38.961 | 154 | 65 | 4 | 681 | 826 | 499 | 631 | 3.38e-17 | 86.7 |
| Msa0584710 | AT3G52100.1 | 59.343 | 396 | 137 | 8 | 1 | 375 | 1 | 393 | 8.69e-157 | 476 |
| Msa0584710 | AT3G52100.1 | 44.279 | 201 | 81 | 5 | 681 | 871 | 517 | 696 | 2.30e-32 | 135 |
| Msa0584710 | AT3G52100.4 | 66.323 | 291 | 92 | 2 | 85 | 375 | 4 | 288 | 1.43e-135 | 417 |
| Msa0584710 | AT3G52100.4 | 44.279 | 201 | 81 | 5 | 681 | 871 | 412 | 591 | 1.12e-32 | 135 |
Find 236 sgRNAs with CRISPR-Local
Find 584 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATAAGTTGGTTATAAATT+TGG | 0.123019 | 4_2:+4634502 | Msa0584710:CDS |
| AAGCAATAAGGCAAATATTT+TGG | 0.136146 | 4_2:+4634430 | Msa0584710:CDS |
| AACAATGATCTTTCTTTAAA+AGG | 0.142690 | 4_2:-4635660 | None:intergenic |
| TGAAATTCATAGGTGGTTTC+TGG | 0.171456 | 4_2:+4631957 | Msa0584710:intron |
| ACATTACATAATATATAAAA+AGG | 0.175634 | 4_2:-4628556 | None:intergenic |
| CATCTTGGTAGGTGAATTAT+TGG | 0.205189 | 4_2:-4634096 | None:intergenic |
| TGTGACACTTTGTGTGTTTC+GGG | 0.231030 | 4_2:-4631338 | None:intergenic |
| CTGTGACACTTTGTGTGTTT+CGG | 0.235922 | 4_2:-4631339 | None:intergenic |
| AATAAGTTGGTTATAAATTT+GGG | 0.260701 | 4_2:+4634503 | Msa0584710:CDS |
| AAGAAGCATTACCATGTAAT+TGG | 0.262907 | 4_2:-4628713 | None:intergenic |
| AGCATCACGCTTAGCTTTCA+TGG | 0.266381 | 4_2:-4629102 | None:intergenic |
| ATCAGACATCCGATGATTCT+TGG | 0.268452 | 4_2:+4635835 | Msa0584710:CDS |
| GATTCCCATCCACTTGAAAT+TGG | 0.272368 | 4_2:-4633731 | None:intergenic |
| TCTAAATCTCAAACAACTTA+TGG | 0.278489 | 4_2:+4628673 | Msa0584710:exon |
| CCTACCAAGATGAATGATTA+TGG | 0.283895 | 4_2:+4634107 | Msa0584710:CDS |
| CCGCTAACAGCAACAATTTC+CGG | 0.284119 | 4_2:-4629038 | None:intergenic |
| GATACATCTGGAAATCTTAA+TGG | 0.299430 | 4_2:+4629990 | Msa0584710:CDS |
| AGTAAAGGTTTAGAATCTTT+TGG | 0.304805 | 4_2:-4635537 | None:intergenic |
| TTTGGGTAAGCATTCTCTAT+TGG | 0.306016 | 4_2:+4636576 | Msa0584710:three_prime_UTR |
| CATGGAATGATCAACCAAAT+TGG | 0.307065 | 4_2:+4635402 | Msa0584710:CDS |
| AGGCCAATCAAAACATATAA+AGG | 0.311363 | 4_2:+4635227 | Msa0584710:CDS |
| TTTGCAGAACATGAACTTAC+TGG | 0.319396 | 4_2:-4631162 | None:intergenic |
| TAACCAGATCTTGATCTCTT+TGG | 0.321987 | 4_2:-4634577 | None:intergenic |
| CTATCCTCATCGTCAGAATA+TGG | 0.325229 | 4_2:-4634014 | None:intergenic |
| ACGTTGCACCTAATCCAATT+TGG | 0.326147 | 4_2:-4635416 | None:intergenic |
| GGCGGCGGTGGCACCACTTT+CGG | 0.327840 | 4_2:-4629014 | None:intergenic |
| AAGAGGTGAAAGGACATATT+TGG | 0.331287 | 4_2:+4635440 | Msa0584710:CDS |
| ATTGCCAGTGTGATGATATT+AGG | 0.335400 | 4_2:+4632566 | Msa0584710:CDS |
| AGAATTTGTTTCTGTTCGTT+AGG | 0.339995 | 4_2:+4628867 | Msa0584710:CDS |
| AGGATGCTGTTCAAGAGCTT+TGG | 0.345011 | 4_2:+4633901 | Msa0584710:CDS |
| TCAGGAAATAGGGTTGATTC+AGG | 0.345145 | 4_2:+4635207 | Msa0584710:intron |
| TGTGTGTTTCGGGCACAAAT+AGG | 0.350257 | 4_2:-4631328 | None:intergenic |
| CACTATGTCCTTCAAAACTA+TGG | 0.351617 | 4_2:-4634205 | None:intergenic |
| ACTTGTTTCCCTTCGTCAAA+TGG | 0.359111 | 4_2:-4635011 | None:intergenic |
| TGTTCGAATTAAAAGCAATA+AGG | 0.361567 | 4_2:+4634418 | Msa0584710:CDS |
| AATCCCAAGGGTGGATAACT+TGG | 0.366338 | 4_2:-4636408 | None:intergenic |
| TATCTTGGAACTCAGGAAAC+AGG | 0.372451 | 4_2:+4636339 | Msa0584710:CDS |
| TCAAAACATATAAAGGTTTA+CGG | 0.372730 | 4_2:+4635234 | Msa0584710:CDS |
| GTGTGTTTCGGGCACAAATA+GGG | 0.377093 | 4_2:-4631327 | None:intergenic |
| TCAAGGGCCAGAGGTCAAAA+AGG | 0.379966 | 4_2:+4635625 | Msa0584710:CDS |
| CTTGTTTCCCTTCGTCAAAT+GGG | 0.387298 | 4_2:-4635010 | None:intergenic |
| AAGTGCTGTAAGTAAGTATA+AGG | 0.390717 | 4_2:-4628478 | None:intergenic |
| GGGTGAAGTTGGTCCTTTAG+AGG | 0.394114 | 4_2:+4635347 | Msa0584710:CDS |
| ATGATCAACCAAATTGGATT+AGG | 0.395130 | 4_2:+4635408 | Msa0584710:CDS |
| CCGTTATTACCTCACAAATT+CGG | 0.395579 | 4_2:-4630284 | None:intergenic |
| TTGTCGTGGGGAATGTTATC+AGG | 0.399762 | 4_2:+4633773 | Msa0584710:CDS |
| TATTAGATCTTTACATAGCT+TGG | 0.401339 | 4_2:+4634229 | Msa0584710:CDS |
| GAAATTCATAGGTGGTTTCT+GGG | 0.406049 | 4_2:+4631958 | Msa0584710:intron |
| GCAGGTGATGAATAAATATC+AGG | 0.409921 | 4_2:-4634281 | None:intergenic |
| AAATCTTAATGGAGAAGAAC+AGG | 0.411719 | 4_2:+4630001 | Msa0584710:CDS |
| AATGGTGGCCTGTACATAAC+AGG | 0.414825 | 4_2:-4636740 | None:intergenic |
| AAAATCCCTGTCTGATTGAC+AGG | 0.418712 | 4_2:-4634338 | None:intergenic |
| ATCGTCAGAATATGGTGAAA+TGG | 0.420114 | 4_2:-4634006 | None:intergenic |
| ATGAGAACATGGATGCAAAC+TGG | 0.421404 | 4_2:+4635763 | Msa0584710:CDS |
| GAAAATATTTCTTCTTGTGT+TGG | 0.421725 | 4_2:-4633984 | None:intergenic |
| TAGAAGATTATTCATCTTTG+AGG | 0.426786 | 4_2:+4636505 | Msa0584710:three_prime_UTR |
| ATTTATTCATCACCTGCTAC+TGG | 0.429638 | 4_2:+4634287 | Msa0584710:CDS |
| CCGGAAATTGTTGCTGTTAG+CGG | 0.434395 | 4_2:+4629038 | Msa0584710:CDS |
| CGAAAGTCAAAATTCTCATC+AGG | 0.436722 | 4_2:+4635584 | Msa0584710:CDS |
| GGCCACCATTACTGTAGAAT+AGG | 0.438982 | 4_2:+4636753 | Msa0584710:three_prime_UTR |
| ATGCTGTTCAAGAGCTTTGG+AGG | 0.441727 | 4_2:+4633904 | Msa0584710:CDS |
| GAATATAAATTTCACTAAAG+AGG | 0.442220 | 4_2:-4636528 | None:intergenic |
| ACCGGTACCTTCAGACAAAC+AGG | 0.442785 | 4_2:-4632033 | None:intergenic |
| AAGATCCTGCAGTTCAGAAA+AGG | 0.445263 | 4_2:-4636645 | None:intergenic |
| GAATCATTCTTTAACTTCAA+AGG | 0.447866 | 4_2:-4634041 | None:intergenic |
| ATTTATTTCATTGGAGTTCG+TGG | 0.447943 | 4_2:+4630247 | Msa0584710:CDS |
| ATAGGAGCTGCTTGAAAAGT+TGG | 0.450677 | 4_2:+4630132 | Msa0584710:CDS |
| CTACATGTTACTTACGATGA+TGG | 0.452765 | 4_2:+4636307 | Msa0584710:CDS |
| ATCTTGGTAGGTGAATTATT+GGG | 0.454003 | 4_2:-4634095 | None:intergenic |
| ATTGTTGCTGTTAGCGGTGG+TGG | 0.455700 | 4_2:+4629044 | Msa0584710:CDS |
| GAATTTGTTTCTGTTCGTTA+GGG | 0.455855 | 4_2:+4628868 | Msa0584710:CDS |
| TTTCCCTTCGTCAAATGGGC+TGG | 0.455866 | 4_2:-4635006 | None:intergenic |
| ACAATTTCCGGCGGCGGCGG+TGG | 0.459269 | 4_2:-4629026 | None:intergenic |
| GTTAGCGGTGGTGGTGGTGG+TGG | 0.459911 | 4_2:+4629053 | Msa0584710:CDS |
| TATCACCAATTTCAAGTGGA+TGG | 0.460018 | 4_2:+4633726 | Msa0584710:CDS |
| TATTCTGACGATGAGGATAG+TGG | 0.460236 | 4_2:+4634017 | Msa0584710:CDS |
| TATGCTAGGAGGCTTGAATC+TGG | 0.462814 | 4_2:+4629167 | Msa0584710:CDS |
| GGTGAAGTTGGTCCTTTAGA+GGG | 0.464502 | 4_2:+4635348 | Msa0584710:CDS |
| TGACTCAAGCTTCCAGTAGC+AGG | 0.469535 | 4_2:-4634299 | None:intergenic |
| TCTGAATTCAACTTCACCTC+TGG | 0.469813 | 4_2:+4635303 | Msa0584710:CDS |
| CTTTCCATAATCATTCATCT+TGG | 0.470156 | 4_2:-4634111 | None:intergenic |
| GATACAGACTCTACCTTATG+AGG | 0.470210 | 4_2:-4631224 | None:intergenic |
| GCTGTTAGCGGTGGTGGTGG+TGG | 0.472919 | 4_2:+4629050 | Msa0584710:CDS |
| TGACCTCTGGCCCTTGATTG+TGG | 0.479701 | 4_2:-4635619 | None:intergenic |
| TTAGCCGCCCAGATTGCTGC+TGG | 0.483510 | 4_2:+4636551 | Msa0584710:three_prime_UTR |
| GATAGCCACGATGGAGCAGC+TGG | 0.484593 | 4_2:+4635042 | Msa0584710:CDS |
| GATCTTTCTTTAAAAGGTGA+AGG | 0.485940 | 4_2:-4635654 | None:intergenic |
| CTGTCTGCAACCTCCTCATA+AGG | 0.486512 | 4_2:+4631211 | Msa0584710:CDS |
| TCTTGTCCTGTCAATCAGAC+AGG | 0.488284 | 4_2:+4634332 | Msa0584710:CDS |
| GCCACCATTACTGTAGAATA+GGG | 0.489777 | 4_2:+4636754 | Msa0584710:three_prime_UTR |
| AGATCCTGCAGTTCAGAAAA+GGG | 0.491809 | 4_2:-4636644 | None:intergenic |
| TGATGGAAAAGTGAGTATCT+TGG | 0.491862 | 4_2:+4636324 | Msa0584710:CDS |
| GAAGGAAACACAATCAAGTT+CGG | 0.494374 | 4_2:+4635261 | Msa0584710:CDS |
| TGCAGTTCAGAAAAGGGCTT+CGG | 0.494500 | 4_2:-4636638 | None:intergenic |
| ACAAATTCGGCAAGCACGGC+AGG | 0.495002 | 4_2:-4630271 | None:intergenic |
| ACGTTGCTTGTCCAATTACA+TGG | 0.496718 | 4_2:+4628702 | Msa0584710:CDS |
| ATAATGCAGAATGTTAGTAC+TGG | 0.497183 | 4_2:+4631303 | Msa0584710:intron |
| AGAGGAGAAGACCACAATCA+AGG | 0.497579 | 4_2:+4635608 | Msa0584710:CDS |
| AAACCCAAGTTATCCACCCT+TGG | 0.498225 | 4_2:+4636404 | Msa0584710:exon |
| GGGTTTCCGCGTTCTCTGAA+CGG | 0.498481 | 4_2:+4628888 | Msa0584710:CDS |
| CGTGATGCTCTTCAGAGAAA+AGG | 0.498878 | 4_2:+4629116 | Msa0584710:CDS |
| TGAAGGTAAAGAAAGATCAT+TGG | 0.499874 | 4_2:+4635692 | Msa0584710:CDS |
| AAAAGTTGGTCTAATAATAG+AGG | 0.500565 | 4_2:+4630146 | Msa0584710:CDS |
| AACCCAAGTTATCCACCCTT+GGG | 0.501512 | 4_2:+4636405 | Msa0584710:exon |
| TACTTTGTGAAATCAGATAC+AGG | 0.501546 | 4_2:-4636709 | None:intergenic |
| GTAAGTAACATGTAGATTTG+AGG | 0.501844 | 4_2:-4636299 | None:intergenic |
| GGAGCAGCTGGACATATTGA+TGG | 0.502263 | 4_2:+4635054 | Msa0584710:CDS |
| GTTGTAGTAAGAAGTACCAT+AGG | 0.505771 | 4_2:+4630114 | Msa0584710:CDS |
| GAAGGTGCAAGTCAATCTCC+TGG | 0.506230 | 4_2:+4635726 | Msa0584710:CDS |
| GATTTCTGCCTGTTATGTAC+AGG | 0.507013 | 4_2:+4636732 | Msa0584710:three_prime_UTR |
| AAGATTTAATTACCAGCTTG+AGG | 0.507382 | 4_2:+4633946 | Msa0584710:CDS |
| AGGCACAAGGGAGAGGTGAC+TGG | 0.507871 | 4_2:+4636262 | Msa0584710:intron |
| TTGCAGAACATGAACTTACT+GGG | 0.510009 | 4_2:-4631161 | None:intergenic |
| TCATGATTTATATTCTCTCC+AGG | 0.512210 | 4_2:-4635744 | None:intergenic |
| TGCTGCTATGATTGCTGCTG+AGG | 0.512543 | 4_2:+4629142 | Msa0584710:CDS |
| ATGCAATCTCAGAGAAATGA+AGG | 0.514018 | 4_2:+4634257 | Msa0584710:CDS |
| GAGGAGAAGACCACAATCAA+GGG | 0.514194 | 4_2:+4635609 | Msa0584710:CDS |
| GCAACAATTTCCGGCGGCGG+CGG | 0.514824 | 4_2:-4629029 | None:intergenic |
| AGATTTAATTACCAGCTTGA+GGG | 0.515066 | 4_2:+4633947 | Msa0584710:CDS |
| CCCTCCCTATTCTACAGTAA+TGG | 0.515133 | 4_2:-4636758 | None:intergenic |
| ACCAGCTTGAGGGCTGCAGC+TGG | 0.516002 | 4_2:+4633957 | Msa0584710:CDS |
| AAGTTGAATTCAGAAACATT+TGG | 0.516357 | 4_2:-4635294 | None:intergenic |
| CGGGGAAAACGTAGTACTCA+TGG | 0.516403 | 4_2:+4635384 | Msa0584710:CDS |
| GCTGTGATCATTGCCAACGC+TGG | 0.517113 | 4_2:+4632539 | Msa0584710:CDS |
| TTCAACTTCACCTCTGGTAG+AGG | 0.517716 | 4_2:+4635309 | Msa0584710:CDS |
| TTTGTCCAGGCACAAGGGAG+AGG | 0.519232 | 4_2:+4636255 | Msa0584710:intron |
| CAAGATCTGGTTACTGCCAA+TGG | 0.520282 | 4_2:+4634587 | Msa0584710:CDS |
| AGTGGTGCCACCGCCGCCGC+CGG | 0.520952 | 4_2:+4629019 | Msa0584710:CDS |
| ATCTAGGCTTGCAGAAGGAC+CGG | 0.522269 | 4_2:+4631134 | Msa0584710:intron |
| TCAAAATTCTCATCAGGAAG+AGG | 0.522988 | 4_2:+4635590 | Msa0584710:CDS |
| CCATAATCATTCATCTTGGT+AGG | 0.524350 | 4_2:-4634107 | None:intergenic |
| TCGACAAAAGACCTTTACAT+TGG | 0.526937 | 4_2:-4630030 | None:intergenic |
| AGTTGCGCATCCAATGTCCC+TGG | 0.528835 | 4_2:+4631360 | Msa0584710:CDS |
| GACTCTCTGTCATTCATGAC+GGG | 0.532056 | 4_2:+4634167 | Msa0584710:CDS |
| TGGTTATAAATTTGGGAGCA+CGG | 0.533503 | 4_2:+4634510 | Msa0584710:CDS |
| AATAGGGAGGGATGTGCCCT+AGG | 0.537130 | 4_2:+4636770 | Msa0584710:three_prime_UTR |
| ACAGCAACAATTTCCGGCGG+CGG | 0.541618 | 4_2:-4629032 | None:intergenic |
| AAGTGAGTATCTTGGAACTC+AGG | 0.543351 | 4_2:+4636332 | Msa0584710:CDS |
| GCATCCAATGTCCCTGGGAA+TGG | 0.543385 | 4_2:+4631366 | Msa0584710:CDS |
| CAATGATCACAGCAAACCAT+TGG | 0.548899 | 4_2:-4632529 | None:intergenic |
| TCAAGTTGCGGTGCCGAAAG+TGG | 0.549626 | 4_2:+4629001 | Msa0584710:CDS |
| GCTGGACATATTGATGGTAA+AGG | 0.550993 | 4_2:+4635060 | Msa0584710:CDS |
| ACCAGCTGCAGCCCTCAAGC+TGG | 0.551122 | 4_2:-4633958 | None:intergenic |
| TGATGGTCAGTGATGAAGAA+AGG | 0.551814 | 4_2:+4634384 | Msa0584710:CDS |
| ATCACCAATTTCAAGTGGAT+GGG | 0.551981 | 4_2:+4633727 | Msa0584710:CDS |
| ATGATGTGAGATCCCTCTAA+AGG | 0.552018 | 4_2:-4635360 | None:intergenic |
| AAGGCGACGTCGTGGAGATG+AGG | 0.554169 | 4_2:-4628459 | None:intergenic |
| GAGGTGACTGGTGTAGTTGA+AGG | 0.554422 | 4_2:+4636274 | Msa0584710:CDS |
| GTAGAGGCAATATGTCGGAT+GGG | 0.555682 | 4_2:+4635325 | Msa0584710:CDS |
| GAAACGTAAGTTTAATGATG+AGG | 0.555914 | 4_2:+4634361 | Msa0584710:CDS |
| AAATTGGGAAGTGATGCAAT+TGG | 0.556017 | 4_2:+4635795 | Msa0584710:CDS |
| CTGTGATCATTGCCAACGCT+GGG | 0.558570 | 4_2:+4632540 | Msa0584710:CDS |
| GGTGATTCACGGAAGGAAGA+TGG | 0.559126 | 4_2:+4628969 | Msa0584710:CDS |
| CGTCCAAAGAGATCAAGATC+TGG | 0.559890 | 4_2:+4634574 | Msa0584710:CDS |
| GTGGAAGATTGTTTGTGAAA+GGG | 0.560028 | 4_2:+4632001 | Msa0584710:CDS |
| TGTGGAAGATTGTTTGTGAA+AGG | 0.560702 | 4_2:+4632000 | Msa0584710:CDS |
| TAAGTTTAATGATGAGGTGA+TGG | 0.563351 | 4_2:+4634367 | Msa0584710:CDS |
| CCTCACAAATTCGGCAAGCA+CGG | 0.563825 | 4_2:-4630275 | None:intergenic |
| TAGTCCATTCCCAGGGACAT+TGG | 0.565083 | 4_2:-4631370 | None:intergenic |
| GGATTAGGTGCAACGTCAAG+AGG | 0.566722 | 4_2:+4635423 | Msa0584710:CDS |
| CGGAACGAAGAACGCGACGA+AGG | 0.567316 | 4_2:+4628908 | Msa0584710:CDS |
| ATAAAGGTTTACGGAAGAGA+AGG | 0.568268 | 4_2:+4635243 | Msa0584710:CDS |
| GGTAGAGGCAATATGTCGGA+TGG | 0.568298 | 4_2:+4635324 | Msa0584710:CDS |
| CTCACGCTTAGTCCATTCCC+AGG | 0.568843 | 4_2:-4631378 | None:intergenic |
| AATGTGAAGGCATGTGATTA+TGG | 0.569243 | 4_2:-4635509 | None:intergenic |
| GCTTGAATCTGGCGATGTTG+TGG | 0.569400 | 4_2:+4629178 | Msa0584710:CDS |
| AGAGGGATCTCACATCATGC+GGG | 0.569444 | 4_2:+4635365 | Msa0584710:CDS |
| TAATCATACATCTAACACCT+AGG | 0.570429 | 4_2:-4636787 | None:intergenic |
| TTACTGTCCTGTTTGTCTGA+AGG | 0.571885 | 4_2:+4632026 | Msa0584710:CDS |
| TCCCTATTCTACAGTAATGG+TGG | 0.572052 | 4_2:-4636755 | None:intergenic |
| ACAGGGGCAATCCAATGTAA+AGG | 0.572393 | 4_2:+4630019 | Msa0584710:CDS |
| GAAAACGTGGTGATAAGTCT+CGG | 0.578542 | 4_2:+4634468 | Msa0584710:CDS |
| TATACATGTCCTACTTGTCG+TGG | 0.579175 | 4_2:+4633759 | Msa0584710:CDS |
| CATGAACTTACTGGGATCAC+CGG | 0.580670 | 4_2:-4631153 | None:intergenic |
| AAGATATCACCAATTTCAAG+TGG | 0.584262 | 4_2:+4633722 | Msa0584710:CDS |
| GTTGCTGTTAGCGGTGGTGG+TGG | 0.584403 | 4_2:+4629047 | Msa0584710:CDS |
| TAGAGGCAATATGTCGGATG+GGG | 0.586954 | 4_2:+4635326 | Msa0584710:CDS |
| ACTGGCAATGTACCCAGCGT+TGG | 0.587950 | 4_2:-4632552 | None:intergenic |
| GGACTCTCTGTCATTCATGA+CGG | 0.591165 | 4_2:+4634166 | Msa0584710:CDS |
| TGGTGGAACGATTCAAGTTG+CGG | 0.592724 | 4_2:+4628989 | Msa0584710:CDS |
| ATACATGTCCTACTTGTCGT+GGG | 0.593049 | 4_2:+4633760 | Msa0584710:CDS |
| ATCCCAAGGGTGGATAACTT+GGG | 0.593144 | 4_2:-4636407 | None:intergenic |
| TAATGCAGAATGTTAGTACT+GGG | 0.600736 | 4_2:+4631304 | Msa0584710:intron |
| GAATATAAATCATGAGAACA+TGG | 0.604777 | 4_2:+4635752 | Msa0584710:CDS |
| TTGCAGACAGTAACAATGGT+AGG | 0.606220 | 4_2:-4631198 | None:intergenic |
| GCTTCATCTAGGCTTGCAGA+AGG | 0.606594 | 4_2:+4631129 | Msa0584710:intron |
| GTTGCGCATCCAATGTCCCT+GGG | 0.607039 | 4_2:+4631361 | Msa0584710:CDS |
| AATCCAGCCCATTTGACGAA+GGG | 0.608149 | 4_2:+4635003 | Msa0584710:CDS |
| ATTCTGACGATGAGGATAGT+GGG | 0.608708 | 4_2:+4634018 | Msa0584710:CDS |
| CTTGTCCTGTCAATCAGACA+GGG | 0.609494 | 4_2:+4634333 | Msa0584710:CDS |
| AGATTCAGAGTCAACACCAA+TGG | 0.610286 | 4_2:+4632513 | Msa0584710:CDS |
| AGGCACTAACCAAGAATCAT+CGG | 0.613042 | 4_2:-4635844 | None:intergenic |
| ATCTTGGAACTCAGGAAACA+GGG | 0.617076 | 4_2:+4636340 | Msa0584710:CDS |
| GAAATTGTTGCTGTTAGCGG+TGG | 0.617826 | 4_2:+4629041 | Msa0584710:CDS |
| TAGAGGGATCTCACATCATG+CGG | 0.619845 | 4_2:+4635364 | Msa0584710:CDS |
| TGCAATCGTGTCGAGAACGA+AGG | 0.621522 | 4_2:+4630056 | Msa0584710:CDS |
| AATCATACATCTAACACCTA+GGG | 0.621983 | 4_2:-4636786 | None:intergenic |
| ATGTTCTGCAAAAGATGTGA+TGG | 0.623740 | 4_2:+4631173 | Msa0584710:CDS |
| TTGCTGCTGAGGAGTATGCT+AGG | 0.624374 | 4_2:+4629153 | Msa0584710:CDS |
| GTAAGTATAAGGCGACGTCG+TGG | 0.626345 | 4_2:-4628467 | None:intergenic |
| GCATAAAACAATCCCAAGGG+TGG | 0.626571 | 4_2:-4636417 | None:intergenic |
| TTCACCATATTCTGACGATG+AGG | 0.627848 | 4_2:+4634010 | Msa0584710:CDS |
| GTTCCAGGTCAAGAATCTTG+AGG | 0.629657 | 4_2:+4633881 | Msa0584710:intron |
| TATTTGGCGAAGCAGTCAGA+AGG | 0.629884 | 4_2:+4635456 | Msa0584710:CDS |
| TAACATTCCCCACGACAAGT+AGG | 0.631142 | 4_2:-4633768 | None:intergenic |
| AGAGGCAATATGTCGGATGG+GGG | 0.631575 | 4_2:+4635327 | Msa0584710:CDS |
| ACCATTACTGTAGAATAGGG+AGG | 0.631734 | 4_2:+4636757 | Msa0584710:three_prime_UTR |
| AATCTTAATGGAGAAGAACA+GGG | 0.634774 | 4_2:+4630002 | Msa0584710:CDS |
| CTCTGGTAGAGGCAATATGT+CGG | 0.634821 | 4_2:+4635320 | Msa0584710:CDS |
| CCGTGCTTGCCGAATTTGTG+AGG | 0.635864 | 4_2:+4630275 | Msa0584710:CDS |
| GTTCAGAAAAGGGCTTCGGT+AGG | 0.639531 | 4_2:-4636634 | None:intergenic |
| CCATTACTGTAGAATAGGGA+GGG | 0.639863 | 4_2:+4636758 | Msa0584710:three_prime_UTR |
| TCATTGTTTAATGACTCTGA+AGG | 0.648459 | 4_2:+4635675 | Msa0584710:CDS |
| CGACATATTGCCTCTACCAG+AGG | 0.648612 | 4_2:-4635319 | None:intergenic |
| AAATCCAGCCCATTTGACGA+AGG | 0.650722 | 4_2:+4635002 | Msa0584710:CDS |
| GTGCAACGTCAAGAGGTGAA+AGG | 0.651539 | 4_2:+4635430 | Msa0584710:CDS |
| GAGGTTGCAGACAGTAACAA+TGG | 0.654117 | 4_2:-4631202 | None:intergenic |
| TTCGTTCCGTTCAGAGAACG+CGG | 0.654302 | 4_2:-4628894 | None:intergenic |
| GGTGAAGAGAGTGGAAAACG+TGG | 0.662930 | 4_2:+4634455 | Msa0584710:CDS |
| CTAACCTAATATCATCACAC+TGG | 0.667427 | 4_2:-4632570 | None:intergenic |
| GATTCACGGAAGGAAGATGG+TGG | 0.670231 | 4_2:+4628972 | Msa0584710:CDS |
| TACACGTGCTGTGATGCATG+TGG | 0.671444 | 4_2:+4631982 | Msa0584710:CDS |
| TCATTGGTTAATGACTCTGA+AGG | 0.671545 | 4_2:+4635708 | Msa0584710:CDS |
| ATCTTAATGGAGAAGAACAG+GGG | 0.675777 | 4_2:+4630003 | Msa0584710:CDS |
| AGACCACAATCAAGGGCCAG+AGG | 0.675986 | 4_2:+4635616 | Msa0584710:CDS |
| CTGGGAATGGACTAAGCGTG+AGG | 0.676321 | 4_2:+4631379 | Msa0584710:CDS |
| GAGGGATCTCACATCATGCG+GGG | 0.683546 | 4_2:+4635366 | Msa0584710:CDS |
| TTTGCATTAGATAGCCACGA+TGG | 0.685268 | 4_2:+4635033 | Msa0584710:CDS |
| ACGCTTGCATTATCAGACAG+TGG | 0.687163 | 4_2:-4634554 | None:intergenic |
| TCACGCTTAGTCCATTCCCA+GGG | 0.687991 | 4_2:-4631377 | None:intergenic |
| CTGCTGAGGAGTATGCTAGG+AGG | 0.692798 | 4_2:+4629156 | Msa0584710:CDS |
| ACAGACTCTACCTTATGAGG+AGG | 0.696642 | 4_2:-4631221 | None:intergenic |
| TACATGTCCTACTTGTCGTG+GGG | 0.701115 | 4_2:+4633761 | Msa0584710:CDS |
| TATGTCCAGCTGCTCCATCG+TGG | 0.712679 | 4_2:-4635047 | None:intergenic |
| CTAACAGCAACAATTTCCGG+CGG | 0.727273 | 4_2:-4629035 | None:intergenic |
| AAAACCAGCAGCAATCTGGG+CGG | 0.740560 | 4_2:-4636555 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATTGAATTTTAATATATA+TGG | - | chr4_2:4628535-4628554 | None:intergenic | 10.0% |
| !! | ATTACATAATATATAAAAAG+GGG | - | chr4_2:4628557-4628576 | None:intergenic | 10.0% |
| !! | CATTACATAATATATAAAAA+GGG | - | chr4_2:4628558-4628577 | None:intergenic | 10.0% |
| !! | ACATTACATAATATATAAAA+AGG | - | chr4_2:4628559-4628578 | None:intergenic | 10.0% |
| !!! | TAGATTTCAATTTTTTTTTT+TGG | - | chr4_2:4628657-4628676 | None:intergenic | 10.0% |
| !! | GATTAAAACATAAATAAATT+TGG | - | chr4_2:4630534-4630553 | None:intergenic | 10.0% |
| !!! | TTTGATATATTTTCTAATTT+TGG | + | chr4_2:4632156-4632175 | Msa0584710:intron | 10.0% |
| !!! | GCTTTTTATTAAATTTTTTT+AGG | + | chr4_2:4635870-4635889 | Msa0584710:intron | 10.0% |
| !! | TATTTGATCAATAAATTTAA+AGG | + | chr4_2:4636165-4636184 | Msa0584710:intron | 10.0% |
| !! | ATATGGGAATTAAAAAAAAA+GGG | - | chr4_2:4628518-4628537 | None:intergenic | 15.0% |
| !! | TATATGGGAATTAAAAAAAA+AGG | - | chr4_2:4628519-4628538 | None:intergenic | 15.0% |
| !! | TTAGAACATAATAGTATATA+TGG | - | chr4_2:4630189-4630208 | None:intergenic | 15.0% |
| !! | TCTAAATATTAATGTAACAA+CGG | + | chr4_2:4630370-4630389 | Msa0584710:intron | 15.0% |
| !! | ATTGACATTATAACTATAAT+GGG | - | chr4_2:4630415-4630434 | None:intergenic | 15.0% |
| !! | ATACATAATCATATATGAAT+TGG | - | chr4_2:4631285-4631304 | None:intergenic | 15.0% |
| !! | AAAAAAAACACAAATTATTC+TGG | - | chr4_2:4631412-4631431 | None:intergenic | 15.0% |
| !!! | TCATTTACATGTTTTAAAAT+TGG | - | chr4_2:4631772-4631791 | None:intergenic | 15.0% |
| !!! | ATATATTTTCTAATTTTGGA+AGG | + | chr4_2:4632160-4632179 | Msa0584710:intron | 15.0% |
| !!! | TATTTTCAATGTTATCAATA+GGG | - | chr4_2:4632798-4632817 | None:intergenic | 15.0% |
| !!! | ATATTTTCAATGTTATCAAT+AGG | - | chr4_2:4632799-4632818 | None:intergenic | 15.0% |
| !!! | ATTGATAACATTGAAAATAT+CGG | + | chr4_2:4632799-4632818 | Msa0584710:intron | 15.0% |
| !! | ATAAAATAAGCATATCAAAT+TGG | - | chr4_2:4633679-4633698 | None:intergenic | 15.0% |
| !! | AACAAGTAATTATATATTGA+AGG | - | chr4_2:4633809-4633828 | None:intergenic | 15.0% |
| !!! | AATAAGTTGGTTATAAATTT+GGG | + | chr4_2:4634503-4634522 | Msa0584710:CDS | 15.0% |
| !!! | TTGATTTTAAATTTCAGTAA+AGG | - | chr4_2:4635555-4635574 | None:intergenic | 15.0% |
| !! | AAAATTTAATAAAAAGCTGA+AGG | - | chr4_2:4635867-4635886 | None:intergenic | 15.0% |
| !!! | TATTAAATTTTTTTAGGCAA+TGG | + | chr4_2:4635876-4635895 | Msa0584710:intron | 15.0% |
| !! | ATAATAAATAATGTCATTCA+CGG | + | chr4_2:4635927-4635946 | Msa0584710:intron | 15.0% |
| !!! | AAAAAAAAATTTTACAGCAT+TGG | + | chr4_2:4636138-4636157 | Msa0584710:intron | 15.0% |
| !! | TATGGGAATTAAAAAAAAAG+GGG | - | chr4_2:4628517-4628536 | None:intergenic | 20.0% |
| !!! | ATAATTTTAGAGAAAAGAAG+AGG | + | chr4_2:4628608-4628627 | Msa0584710:five_prime_UTR | 20.0% |
| !!! | TAATTTTAGAGAAAAGAAGA+GGG | + | chr4_2:4628609-4628628 | Msa0584710:five_prime_UTR | 20.0% |
| !!! | TTTTTTTTTGGTGTAGTTTA+GGG | - | chr4_2:4628645-4628664 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTGGTGTAGTTT+AGG | - | chr4_2:4628646-4628665 | None:intergenic | 20.0% |
| !! | AATTGAAATTGAAAAGAAGA+GGG | - | chr4_2:4628788-4628807 | None:intergenic | 20.0% |
| !! | TAATTGAAATTGAAAAGAAG+AGG | - | chr4_2:4628789-4628808 | None:intergenic | 20.0% |
| !! | ATCAAAATTTCACATAACTA+GGG | - | chr4_2:4629216-4629235 | None:intergenic | 20.0% |
| !! | TACAAAATATTGTGAAATAC+CGG | - | chr4_2:4629533-4629552 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTTTATTACTGAC+CGG | + | chr4_2:4629952-4629971 | Msa0584710:intron | 20.0% |
| !! | CATTGACATTATAACTATAA+TGG | - | chr4_2:4630416-4630435 | None:intergenic | 20.0% |
| !! | GACATAACATAATAAATCAT+GGG | - | chr4_2:4631479-4631498 | None:intergenic | 20.0% |
| !!! | TACCACCTTTTTTTTTTTTT+TGG | + | chr4_2:4631618-4631637 | Msa0584710:intron | 20.0% |
| !! | AACCAAAAAAAAAAAAAAGG+TGG | - | chr4_2:4631623-4631642 | None:intergenic | 20.0% |
| !! | GCTAACCAAAAAAAAAAAAA+AGG | - | chr4_2:4631626-4631645 | None:intergenic | 20.0% |
| !!! | TTATTAATGTTGTTTTGAAC+AGG | + | chr4_2:4631701-4631720 | Msa0584710:intron | 20.0% |
| !!! | TCTCTTTTATTGAAATTCAT+AGG | + | chr4_2:4631947-4631966 | Msa0584710:intron | 20.0% |
| !! | AATATATCAAAAAATTCCGT+TGG | - | chr4_2:4632147-4632166 | None:intergenic | 20.0% |
| !! | AGGATAATATACAGAATATA+AGG | - | chr4_2:4632194-4632213 | None:intergenic | 20.0% |
| !!! | TATTCTGTATATTATCCTTT+TGG | + | chr4_2:4632196-4632215 | Msa0584710:intron | 20.0% |
| !!! | ACTGTCATTTAATTTCATTT+TGG | + | chr4_2:4632360-4632379 | Msa0584710:intron | 20.0% |
| !!! | ATTTTCAATGTTATCAATAG+GGG | - | chr4_2:4632797-4632816 | None:intergenic | 20.0% |
| !!! | TCACTTTTAATTTTTGTTTC+TGG | + | chr4_2:4632995-4633014 | Msa0584710:intron | 20.0% |
| !!! | TGAGATTTTAAGTTTTATGT+CGG | + | chr4_2:4633074-4633093 | Msa0584710:intron | 20.0% |
| !!! | TATAACCATTGATAACATTT+TGG | + | chr4_2:4633380-4633399 | Msa0584710:intron | 20.0% |
| !! | AAATACCAAAATGTTATCAA+TGG | - | chr4_2:4633388-4633407 | None:intergenic | 20.0% |
| !!! | ATAATTACTTGTTTCTCAAT+TGG | + | chr4_2:4633816-4633835 | Msa0584710:intron | 20.0% |
| !!! | GAATAAGTTGGTTATAAATT+TGG | + | chr4_2:4634502-4634521 | Msa0584710:CDS | 20.0% |
| !! | TGATAAATTTAAACAGGAAA+AGG | - | chr4_2:4634974-4634993 | None:intergenic | 20.0% |
| !!! | TTTTCCTGTTTAAATTTATC+AGG | + | chr4_2:4634973-4634992 | Msa0584710:intron | 20.0% |
| !! | ATTTCCTGATAAATTTAAAC+AGG | - | chr4_2:4634980-4634999 | None:intergenic | 20.0% |
| !!! | TCATATAATTTTCAGGAAAT+AGG | + | chr4_2:4635196-4635215 | Msa0584710:intron | 20.0% |
| !!! | CATATAATTTTCAGGAAATA+GGG | + | chr4_2:4635197-4635216 | Msa0584710:intron | 20.0% |
| !!! | AAACCTTTATATGTTTTGAT+TGG | - | chr4_2:4635233-4635252 | None:intergenic | 20.0% |
| !! | TCAAAACATATAAAGGTTTA+CGG | + | chr4_2:4635234-4635253 | Msa0584710:CDS | 20.0% |
| !! | AACAATGATCTTTCTTTAAA+AGG | - | chr4_2:4635663-4635682 | None:intergenic | 20.0% |
| !! | TAATAAATAATGTCATTCAC+GGG | + | chr4_2:4635928-4635947 | Msa0584710:intron | 20.0% |
| !! | CGAAACATATAATAAATTAC+TGG | - | chr4_2:4635968-4635987 | None:intergenic | 20.0% |
| !! | GAATATAAATTTCACTAAAG+AGG | - | chr4_2:4636531-4636550 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGGTGTAGTTTAG+GGG | - | chr4_2:4628644-4628663 | None:intergenic | 25.0% |
| ! | TCTAAATCTCAAACAACTTA+TGG | + | chr4_2:4628673-4628692 | Msa0584710:exon | 25.0% |
| ! | CATCAAAATTTCACATAACT+AGG | - | chr4_2:4629217-4629236 | None:intergenic | 25.0% |
| !!! | AAATTTTGATGTGTGATTTG+TGG | + | chr4_2:4629226-4629245 | Msa0584710:intron | 25.0% |
| ! | TTGATATGCAAAATTTGTGA+AGG | + | chr4_2:4629627-4629646 | Msa0584710:intron | 25.0% |
| !!! | TAATTTTTTTGTGTGATGTG+TGG | + | chr4_2:4629867-4629886 | Msa0584710:intron | 25.0% |
| !!! | AATTTTTTTGTGTGATGTGT+GGG | + | chr4_2:4629868-4629887 | Msa0584710:intron | 25.0% |
| !!! | TGTGGATTTCTTGTATTTTT+TGG | + | chr4_2:4629905-4629924 | Msa0584710:intron | 25.0% |
| !!! | GTGGATTTCTTGTATTTTTT+GGG | + | chr4_2:4629906-4629925 | Msa0584710:intron | 25.0% |
| !!! | TCTTGTATTTTTTGGGAATT+AGG | + | chr4_2:4629913-4629932 | Msa0584710:intron | 25.0% |
| !! | AAAAGTTGGTCTAATAATAG+AGG | + | chr4_2:4630146-4630165 | Msa0584710:CDS | 25.0% |
| !! | TTTTGGCAGATTTATTTCAT+TGG | + | chr4_2:4630238-4630257 | Msa0584710:intron | 25.0% |
| ! | TTTCATGTATTGTCTGTTTA+AGG | + | chr4_2:4630337-4630356 | Msa0584710:intron | 25.0% |
| !! | TTTTTGACAAAAGACAGAAA+AGG | - | chr4_2:4630556-4630575 | None:intergenic | 25.0% |
| ! | AATAAAAATAAACAGCGCAT+AGG | - | chr4_2:4630668-4630687 | None:intergenic | 25.0% |
| !!! | ATGCGCTGTTTATTTTTATT+TGG | + | chr4_2:4630668-4630687 | Msa0584710:intron | 25.0% |
| !!! | AATTGATTTTGTATCCTACA+TGG | + | chr4_2:4630697-4630716 | Msa0584710:intron | 25.0% |
| ! | ATTACCAGTTCGTAAATAAA+CGG | - | chr4_2:4630747-4630766 | None:intergenic | 25.0% |
| !! | ATTTTGAACGCAATGTAAAA+TGG | - | chr4_2:4630841-4630860 | None:intergenic | 25.0% |
| ! | ATATATATATGTCGGTAAGA+CGG | - | chr4_2:4630949-4630968 | None:intergenic | 25.0% |
| ! | ACACATAAATTGAATGTCTT+TGG | + | chr4_2:4631037-4631056 | Msa0584710:intron | 25.0% |
| !!! | TTTTTTTTTACTCAGATGTG+TGG | + | chr4_2:4631425-4631444 | Msa0584710:intron | 25.0% |
| ! | AACATAATAAATCATGGGAA+TGG | - | chr4_2:4631474-4631493 | None:intergenic | 25.0% |
| ! | GGACATAACATAATAAATCA+TGG | - | chr4_2:4631480-4631499 | None:intergenic | 25.0% |
| !!! | GTCCCTTATAATTGTTTTTA+TGG | + | chr4_2:4631496-4631515 | Msa0584710:intron | 25.0% |
| ! | GGCCATAAAAACAATTATAA+GGG | - | chr4_2:4631501-4631520 | None:intergenic | 25.0% |
| ! | TGGCCATAAAAACAATTATA+AGG | - | chr4_2:4631502-4631521 | None:intergenic | 25.0% |
| !! | CTTTTATTGAAATTCATAGG+TGG | + | chr4_2:4631950-4631969 | Msa0584710:intron | 25.0% |
| !! | GATTAGTGTTGTTAAATAAC+TGG | + | chr4_2:4632611-4632630 | Msa0584710:intron | 25.0% |
| ! | GATATGTAATAGTGGTAAAT+CGG | - | chr4_2:4632644-4632663 | None:intergenic | 25.0% |
| ! | GATTTACCACTATTACATAT+CGG | + | chr4_2:4632643-4632662 | Msa0584710:intron | 25.0% |
| ! | ATTTACCACTATTACATATC+GGG | + | chr4_2:4632644-4632663 | Msa0584710:intron | 25.0% |
| ! | TGTGGTTATTGTTTACATAT+CGG | + | chr4_2:4632749-4632768 | Msa0584710:intron | 25.0% |
| ! | AAAATAAAACAATGCTGAGT+GGG | + | chr4_2:4632847-4632866 | Msa0584710:intron | 25.0% |
| ! | TATGAAGTAAAGAGAGAAAA+TGG | - | chr4_2:4632953-4632972 | None:intergenic | 25.0% |
| ! | AAAAATCGAATGAGAAATAG+TGG | - | chr4_2:4633220-4633239 | None:intergenic | 25.0% |
| !!! | ACTATTTCTCATTCGATTTT+TGG | + | chr4_2:4633219-4633238 | Msa0584710:intron | 25.0% |
| ! | ATGTTATTAATAGCTTATCG+CGG | - | chr4_2:4633260-4633279 | None:intergenic | 25.0% |
| ! | CGATAAGCTATTAATAACAT+TGG | + | chr4_2:4633260-4633279 | Msa0584710:intron | 25.0% |
| ! | ATAGCATAATTTACAAGACA+AGG | - | chr4_2:4633626-4633645 | None:intergenic | 25.0% |
| ! | GAAAATATTTCTTCTTGTGT+TGG | - | chr4_2:4633987-4634006 | None:intergenic | 25.0% |
| !! | GAATCATTCTTTAACTTCAA+AGG | - | chr4_2:4634044-4634063 | None:intergenic | 25.0% |
| ! | TATTAGATCTTTACATAGCT+TGG | + | chr4_2:4634229-4634248 | Msa0584710:CDS | 25.0% |
| ! | TGTTCGAATTAAAAGCAATA+AGG | + | chr4_2:4634418-4634437 | Msa0584710:CDS | 25.0% |
| !! | AAGCAATAAGGCAAATATTT+TGG | + | chr4_2:4634430-4634449 | Msa0584710:CDS | 25.0% |
| !!! | AATAAGGCAAATATTTTGGA+TGG | + | chr4_2:4634434-4634453 | Msa0584710:CDS | 25.0% |
| ! | GAATGTGAAAAAGAATAAGT+TGG | + | chr4_2:4634490-4634509 | Msa0584710:CDS | 25.0% |
| !! | TGGCATATTTTATACATTGT+AGG | + | chr4_2:4634803-4634822 | Msa0584710:intron | 25.0% |
| !! | CATAGGTTCATATAATTTTC+AGG | + | chr4_2:4635189-4635208 | Msa0584710:intron | 25.0% |
| ! | AAGTTGAATTCAGAAACATT+TGG | - | chr4_2:4635297-4635316 | None:intergenic | 25.0% |
| !!! | AGTAAAGGTTTAGAATCTTT+TGG | - | chr4_2:4635540-4635559 | None:intergenic | 25.0% |
| ! | GAATATAAATCATGAGAACA+TGG | + | chr4_2:4635752-4635771 | Msa0584710:CDS | 25.0% |
| !!! | AAACTGGATTTTGATGAAAT+TGG | + | chr4_2:4635779-4635798 | Msa0584710:CDS | 25.0% |
| !!! | AACTGGATTTTGATGAAATT+GGG | + | chr4_2:4635780-4635799 | Msa0584710:CDS | 25.0% |
| ! | AATAAATAATGTCATTCACG+GGG | + | chr4_2:4635929-4635948 | Msa0584710:intron | 25.0% |
| !! | ATATAATAAATTACTGGCTG+GGG | - | chr4_2:4635962-4635981 | None:intergenic | 25.0% |
| !! | CATATAATAAATTACTGGCT+GGG | - | chr4_2:4635963-4635982 | None:intergenic | 25.0% |
| ! | ACATATAATAAATTACTGGC+TGG | - | chr4_2:4635964-4635983 | None:intergenic | 25.0% |
| ! | TCATTCTAGACTTGTAATAA+TGG | + | chr4_2:4636202-4636221 | Msa0584710:intron | 25.0% |
| ! | TAGAAGATTATTCATCTTTG+AGG | + | chr4_2:4636505-4636524 | Msa0584710:three_prime_UTR | 25.0% |
| ! | AAGTGCTGTAAGTAAGTATA+AGG | - | chr4_2:4628481-4628500 | None:intergenic | 30.0% |
| !! | AAGAAGCATTACCATGTAAT+TGG | - | chr4_2:4628716-4628735 | None:intergenic | 30.0% |
| AAGAAGAGAAAGAAAAGAGA+GGG | - | chr4_2:4628762-4628781 | None:intergenic | 30.0% | |
| AAAGAAGAGAAAGAAAAGAG+AGG | - | chr4_2:4628763-4628782 | None:intergenic | 30.0% | |
| !! | AGAATTTGTTTCTGTTCGTT+AGG | + | chr4_2:4628867-4628886 | Msa0584710:CDS | 30.0% |
| !! | GAATTTGTTTCTGTTCGTTA+GGG | + | chr4_2:4628868-4628887 | Msa0584710:CDS | 30.0% |
| !!! | AATTTGCTGAGTGATTTTCT+CGG | + | chr4_2:4628948-4628967 | Msa0584710:CDS | 30.0% |
| !! | GATTTTAGTGTTGTCAATTG+CGG | + | chr4_2:4629271-4629290 | Msa0584710:intron | 30.0% |
| TTTAATTCCGCTATGCAAAA+GGG | + | chr4_2:4629499-4629518 | Msa0584710:intron | 30.0% | |
| TTTGACAACACTAGTTGATT+TGG | + | chr4_2:4629772-4629791 | Msa0584710:intron | 30.0% | |
| TTATTATGTTTGTGTGTGCT+TGG | + | chr4_2:4629840-4629859 | Msa0584710:intron | 30.0% | |
| !!! | TGGGTAATTTTTTTGTCTTG+TGG | + | chr4_2:4629887-4629906 | Msa0584710:intron | 30.0% |
| GATACATCTGGAAATCTTAA+TGG | + | chr4_2:4629990-4630009 | Msa0584710:CDS | 30.0% | |
| AAATCTTAATGGAGAAGAAC+AGG | + | chr4_2:4630001-4630020 | Msa0584710:CDS | 30.0% | |
| AATCTTAATGGAGAAGAACA+GGG | + | chr4_2:4630002-4630021 | Msa0584710:CDS | 30.0% | |
| ATTTATTTCATTGGAGTTCG+TGG | + | chr4_2:4630247-4630266 | Msa0584710:CDS | 30.0% | |
| CACTTTCATTATTTAAGCGT+GGG | - | chr4_2:4630474-4630493 | None:intergenic | 30.0% | |
| ACACTTTCATTATTTAAGCG+TGG | - | chr4_2:4630475-4630494 | None:intergenic | 30.0% | |
| !! | TAATGAAAGTGTTTCAACAC+TGG | + | chr4_2:4630483-4630502 | Msa0584710:intron | 30.0% |
| !! | AATGAAAGTGTTTCAACACT+GGG | + | chr4_2:4630484-4630503 | Msa0584710:intron | 30.0% |
| TTAAAAGACAGACAGAGAAA+AGG | - | chr4_2:4630588-4630607 | None:intergenic | 30.0% | |
| GTTTAATCATATTGCCATGT+AGG | - | chr4_2:4630714-4630733 | None:intergenic | 30.0% | |
| TTAACCGTTTATTTACGAAC+TGG | + | chr4_2:4630740-4630759 | Msa0584710:intron | 30.0% | |
| TACTCTAATGAAACAATAGC+TGG | - | chr4_2:4631087-4631106 | None:intergenic | 30.0% | |
| !! | TGTTTCATTAGAGTACTGTT+TGG | + | chr4_2:4631092-4631111 | Msa0584710:intron | 30.0% |
| !!! | ATGTTTTGTTTGCTTCATCT+AGG | + | chr4_2:4631118-4631137 | Msa0584710:intron | 30.0% |
| AATACTAAGCTCACTAGTAA+GGG | - | chr4_2:4631249-4631268 | None:intergenic | 30.0% | |
| ATAATGCAGAATGTTAGTAC+TGG | + | chr4_2:4631303-4631322 | Msa0584710:intron | 30.0% | |
| TAATGCAGAATGTTAGTACT+GGG | + | chr4_2:4631304-4631323 | Msa0584710:intron | 30.0% | |
| TCAAAGTTTATCTTCCTAGT+TGG | + | chr4_2:4631558-4631577 | Msa0584710:intron | 30.0% | |
| TTGCTCATCAAAACTAAAGA+CGG | - | chr4_2:4631871-4631890 | None:intergenic | 30.0% | |
| !!! | TTAGTTTTGATGAGCAACTA+TGG | + | chr4_2:4631874-4631893 | Msa0584710:intron | 30.0% |
| CAACATGCTACAAGAAAATT+AGG | - | chr4_2:4632077-4632096 | None:intergenic | 30.0% | |
| AAATCACAATCAGCTATCAT+TGG | + | chr4_2:4632102-4632121 | Msa0584710:intron | 30.0% | |
| AATCACAATCAGCTATCATT+GGG | + | chr4_2:4632103-4632122 | Msa0584710:intron | 30.0% | |
| AGTACATAGAACAATACCAA+CGG | + | chr4_2:4632128-4632147 | Msa0584710:intron | 30.0% | |
| ! | ATATTGTCTAGAAGTATGAC+AGG | + | chr4_2:4632269-4632288 | Msa0584710:intron | 30.0% |
| ! | TATTGTCTAGAAGTATGACA+GGG | + | chr4_2:4632270-4632289 | Msa0584710:intron | 30.0% |
| !!! | CTGTTTTTGGCTTATTTTGT+AGG | + | chr4_2:4632483-4632502 | Msa0584710:intron | 30.0% |
| AGCTACTACTAAAATAACAG+TGG | + | chr4_2:4632709-4632728 | Msa0584710:intron | 30.0% | |
| CAAAATAAAACAATGCTGAG+TGG | + | chr4_2:4632846-4632865 | Msa0584710:intron | 30.0% | |
| AGTGATGAGACGTTAAAAAT+GGG | - | chr4_2:4632913-4632932 | None:intergenic | 30.0% | |
| TAGTGATGAGACGTTAAAAA+TGG | - | chr4_2:4632914-4632933 | None:intergenic | 30.0% | |
| !!! | GTCGGTCACTTTTTTAATTT+CGG | + | chr4_2:4633092-4633111 | Msa0584710:intron | 30.0% |
| !!! | ATGTGCAGCATTAGTTTTTT+TGG | + | chr4_2:4633133-4633152 | Msa0584710:intron | 30.0% |
| TTTATATTTCAACCGCTTTG+TGG | + | chr4_2:4633168-4633187 | Msa0584710:intron | 30.0% | |
| AAATATCAGAAACCACAAAG+CGG | - | chr4_2:4633183-4633202 | None:intergenic | 30.0% | |
| GCAAAGAAAAGCAGTAAATA+TGG | - | chr4_2:4633310-4633329 | None:intergenic | 30.0% | |
| ACTCCAGAACATATATGTAA+AGG | + | chr4_2:4633331-4633350 | Msa0584710:intron | 30.0% | |
| GTTCCTTTACATATATGTTC+TGG | - | chr4_2:4633337-4633356 | None:intergenic | 30.0% | |
| CTCACTAGACATTAAGAAAT+AGG | - | chr4_2:4633421-4633440 | None:intergenic | 30.0% | |
| ATAATTTACAAGACAAGGTC+AGG | - | chr4_2:4633621-4633640 | None:intergenic | 30.0% | |
| !! | TTATGCTATGCTGTTTGTTT+TGG | + | chr4_2:4633637-4633656 | Msa0584710:intron | 30.0% |
| AAGATATCACCAATTTCAAG+TGG | + | chr4_2:4633722-4633741 | Msa0584710:CDS | 30.0% | |
| AAGATTTAATTACCAGCTTG+AGG | + | chr4_2:4633946-4633965 | Msa0584710:CDS | 30.0% | |
| AGATTTAATTACCAGCTTGA+GGG | + | chr4_2:4633947-4633966 | Msa0584710:CDS | 30.0% | |
| ATCTTGGTAGGTGAATTATT+GGG | - | chr4_2:4634098-4634117 | None:intergenic | 30.0% | |
| CTTTCCATAATCATTCATCT+TGG | - | chr4_2:4634114-4634133 | None:intergenic | 30.0% | |
| CAAAAAGACTGCTAAGAAAA+AGG | + | chr4_2:4634145-4634164 | Msa0584710:CDS | 30.0% | |
| GAAACGTAAGTTTAATGATG+AGG | + | chr4_2:4634361-4634380 | Msa0584710:CDS | 30.0% | |
| TAAGTTTAATGATGAGGTGA+TGG | + | chr4_2:4634367-4634386 | Msa0584710:CDS | 30.0% | |
| !! | CTTTTAATTCGAACAACTCT+GGG | - | chr4_2:4634413-4634432 | None:intergenic | 30.0% |
| TTCATGTAGACATATACCAT+TGG | - | chr4_2:4634606-4634625 | None:intergenic | 30.0% | |
| !!! | CCATATTTTAGCTTGAGAAA+CGG | + | chr4_2:4634656-4634675 | Msa0584710:intron | 30.0% |
| !!! | CATATTTTAGCTTGAGAAAC+GGG | + | chr4_2:4634657-4634676 | Msa0584710:intron | 30.0% |
| !!! | ATATTTTAGCTTGAGAAACG+GGG | + | chr4_2:4634658-4634677 | Msa0584710:intron | 30.0% |
| !!! | CCATATTTTAGCTTGAGAAA+CGG | + | chr4_2:4634656-4634675 | Msa0584710:intron | 30.0% |
| !!! | CATATTTTAGCTTGAGAAAC+GGG | + | chr4_2:4634657-4634676 | Msa0584710:intron | 30.0% |
| !!! | ATATTTTAGCTTGAGAAACG+GGG | + | chr4_2:4634658-4634677 | Msa0584710:intron | 30.0% |
| !! | AAATATGCCACTGATTTGAT+GGG | - | chr4_2:4634793-4634812 | None:intergenic | 30.0% |
| !! | AAAATATGCCACTGATTTGA+TGG | - | chr4_2:4634794-4634813 | None:intergenic | 30.0% |
| ! | ACATATTGATGGTAAAGGTA+GGG | + | chr4_2:4635065-4635084 | Msa0584710:intron | 30.0% |
| AAAGTCACAGATCAAAGAAA+GGG | - | chr4_2:4635102-4635121 | None:intergenic | 30.0% | |
| AAAAGTCACAGATCAAAGAA+AGG | - | chr4_2:4635103-4635122 | None:intergenic | 30.0% | |
| ATAACTCATACTTAATGCTC+AGG | - | chr4_2:4635137-4635156 | None:intergenic | 30.0% | |
| ! | TTGTCTCTGAAAAGTAACAT+AGG | + | chr4_2:4635172-4635191 | Msa0584710:intron | 30.0% |
| AGGCCAATCAAAACATATAA+AGG | + | chr4_2:4635227-4635246 | Msa0584710:CDS | 30.0% | |
| ATGATCAACCAAATTGGATT+AGG | + | chr4_2:4635408-4635427 | Msa0584710:CDS | 30.0% | |
| !!! | TGAGAATTTTGACTTTCGAT+AGG | - | chr4_2:4635582-4635601 | None:intergenic | 30.0% |
| ! | GATCTTTCTTTAAAAGGTGA+AGG | - | chr4_2:4635657-4635676 | None:intergenic | 30.0% |
| TCATTGTTTAATGACTCTGA+AGG | + | chr4_2:4635675-4635694 | Msa0584710:CDS | 30.0% | |
| TGAAGGTAAAGAAAGATCAT+TGG | + | chr4_2:4635692-4635711 | Msa0584710:CDS | 30.0% | |
| TCATGATTTATATTCTCTCC+AGG | - | chr4_2:4635747-4635766 | None:intergenic | 30.0% | |
| ATAAATAATGTCATTCACGG+GGG | + | chr4_2:4635930-4635949 | Msa0584710:intron | 30.0% | |
| CTTGAAAACTTGAGAAAGTT+TGG | + | chr4_2:4636093-4636112 | Msa0584710:intron | 30.0% | |
| ! | TTTTCCTTACATTTTTGTCC+AGG | + | chr4_2:4636242-4636261 | Msa0584710:intron | 30.0% |
| GTAAGTAACATGTAGATTTG+AGG | - | chr4_2:4636302-4636321 | None:intergenic | 30.0% | |
| TACTTTGTGAAATCAGATAC+AGG | - | chr4_2:4636712-4636731 | None:intergenic | 30.0% | |
| AATCATACATCTAACACCTA+GGG | - | chr4_2:4636789-4636808 | None:intergenic | 30.0% | |
| TAATCATACATCTAACACCT+AGG | - | chr4_2:4636790-4636809 | None:intergenic | 30.0% | |
| AAAAAAAGGGGTAGAGATGA+GGG | - | chr4_2:4628505-4628524 | None:intergenic | 35.0% | |
| AAAAAAAAGGGGTAGAGATG+AGG | - | chr4_2:4628506-4628525 | None:intergenic | 35.0% | |
| GGTGAAATTGTGATATGTGA+TGG | + | chr4_2:4629321-4629340 | Msa0584710:intron | 35.0% | |
| GAAATTGTGATATGTGATGG+TGG | + | chr4_2:4629324-4629343 | Msa0584710:intron | 35.0% | |
| TGTGTTTGAAAATTGAGCTG+TGG | + | chr4_2:4629359-4629378 | Msa0584710:intron | 35.0% | |
| !! | GTTGTTGATTTCAGTGTTGT+CGG | + | chr4_2:4629399-4629418 | Msa0584710:intron | 35.0% |
| GTTTAATTCCGCTATGCAAA+AGG | + | chr4_2:4629498-4629517 | Msa0584710:intron | 35.0% | |
| GTGTCAGTGTTGTCAAATAT+CGG | + | chr4_2:4629560-4629579 | Msa0584710:intron | 35.0% | |
| CTATTCAATGTTGTCGATAG+CGG | - | chr4_2:4629715-4629734 | None:intergenic | 35.0% | |
| CAACTAGTGTTGTCAAATAG+CGG | - | chr4_2:4629769-4629788 | None:intergenic | 35.0% | |
| !!! | TGTTTTTTATTACTGACCGG+TGG | + | chr4_2:4629955-4629974 | Msa0584710:intron | 35.0% |
| ! | TTTTATGTGCAGGATACATC+TGG | + | chr4_2:4629978-4629997 | Msa0584710:intron | 35.0% |
| ATCTTAATGGAGAAGAACAG+GGG | + | chr4_2:4630003-4630022 | Msa0584710:CDS | 35.0% | |
| TCGACAAAAGACCTTTACAT+TGG | - | chr4_2:4630033-4630052 | None:intergenic | 35.0% | |
| !! | GTTGTAGTAAGAAGTACCAT+AGG | + | chr4_2:4630114-4630133 | Msa0584710:CDS | 35.0% |
| GTCTAATAATAGAGGTGAGA+AGG | + | chr4_2:4630154-4630173 | Msa0584710:intron | 35.0% | |
| !!! | TTCATTCTGTGTCGACTTTT+TGG | + | chr4_2:4630221-4630240 | Msa0584710:intron | 35.0% |
| CCGTTATTACCTCACAAATT+CGG | - | chr4_2:4630287-4630306 | None:intergenic | 35.0% | |
| CCGAATTTGTGAGGTAATAA+CGG | + | chr4_2:4630284-4630303 | Msa0584710:intron | 35.0% | |
| CGAATTTGTGAGGTAATAAC+GGG | + | chr4_2:4630285-4630304 | Msa0584710:intron | 35.0% | |
| !! | ATGAAAGTGTTTCAACACTG+GGG | + | chr4_2:4630485-4630504 | Msa0584710:intron | 35.0% |
| ! | AACCTTCCATGCTTTGTTAT+TGG | + | chr4_2:4630774-4630793 | Msa0584710:intron | 35.0% |
| !! | ACCTTCCATGCTTTGTTATT+GGG | + | chr4_2:4630775-4630794 | Msa0584710:intron | 35.0% |
| !! | TTTGTTATTGGGAAACCAGT+TGG | + | chr4_2:4630786-4630805 | Msa0584710:intron | 35.0% |
| GAAACTAAAAACACGTCACA+AGG | - | chr4_2:4630882-4630901 | None:intergenic | 35.0% | |
| TCTTCTCATGTGCTTCATTT+AGG | + | chr4_2:4630900-4630919 | Msa0584710:intron | 35.0% | |
| TTGCAGAACATGAACTTACT+GGG | - | chr4_2:4631164-4631183 | None:intergenic | 35.0% | |
| TTTGCAGAACATGAACTTAC+TGG | - | chr4_2:4631165-4631184 | None:intergenic | 35.0% | |
| ATGTTCTGCAAAAGATGTGA+TGG | + | chr4_2:4631173-4631192 | Msa0584710:CDS | 35.0% | |
| CAATACTAAGCTCACTAGTA+AGG | - | chr4_2:4631250-4631269 | None:intergenic | 35.0% | |
| TGGGAATGGAAAAAACATTC+AGG | - | chr4_2:4631460-4631479 | None:intergenic | 35.0% | |
| !! | TGTTTTTATGGCCACATGAT+TGG | + | chr4_2:4631508-4631527 | Msa0584710:intron | 35.0% |
| GCTTTCATATTCCAATCATG+TGG | - | chr4_2:4631522-4631541 | None:intergenic | 35.0% | |
| !!! | TACTCTGAGGGTTTTGAAAA+TGG | + | chr4_2:4631669-4631688 | Msa0584710:intron | 35.0% |
| !!! | TAATGTTGTTTTGAACAGGC+AGG | + | chr4_2:4631705-4631724 | Msa0584710:intron | 35.0% |
| GTATCATCTTCGAATCAAGT+AGG | + | chr4_2:4631821-4631840 | Msa0584710:intron | 35.0% | |
| TGAAATTCATAGGTGGTTTC+TGG | + | chr4_2:4631957-4631976 | Msa0584710:intron | 35.0% | |
| GAAATTCATAGGTGGTTTCT+GGG | + | chr4_2:4631958-4631977 | Msa0584710:intron | 35.0% | |
| TGTGGAAGATTGTTTGTGAA+AGG | + | chr4_2:4632000-4632019 | Msa0584710:CDS | 35.0% | |
| GTGGAAGATTGTTTGTGAAA+GGG | + | chr4_2:4632001-4632020 | Msa0584710:CDS | 35.0% | |
| AAGAGATCTAGAGAAAAGAC+CGG | - | chr4_2:4632054-4632073 | None:intergenic | 35.0% | |
| ATCACAATCAGCTATCATTG+GGG | + | chr4_2:4632104-4632123 | Msa0584710:intron | 35.0% | |
| ATCTCCTACATTTAGACTCA+CGG | - | chr4_2:4632223-4632242 | None:intergenic | 35.0% | |
| ! | TAGAAGTATGACAGGGAATT+AGG | + | chr4_2:4632277-4632296 | Msa0584710:intron | 35.0% |
| CATGCTGTCTGAATGTTAAT+GGG | - | chr4_2:4632304-4632323 | None:intergenic | 35.0% | |
| ACATGCTGTCTGAATGTTAA+TGG | - | chr4_2:4632305-4632324 | None:intergenic | 35.0% | |
| ATTGCCAGTGTGATGATATT+AGG | + | chr4_2:4632566-4632585 | Msa0584710:CDS | 35.0% | |
| CTAACCTAATATCATCACAC+TGG | - | chr4_2:4632573-4632592 | None:intergenic | 35.0% | |
| ! | ATAACAGTGGCTTTTTGCAT+CGG | + | chr4_2:4632722-4632741 | Msa0584710:intron | 35.0% |
| ACGTTAAAAATGGGGGTTTA+GGG | - | chr4_2:4632904-4632923 | None:intergenic | 35.0% | |
| TGATGAGACGTTAAAAATGG+GGG | - | chr4_2:4632911-4632930 | None:intergenic | 35.0% | |
| GTGATGAGACGTTAAAAATG+GGG | - | chr4_2:4632912-4632931 | None:intergenic | 35.0% | |
| AGTAAAGAGAGAAAATGGAG+AGG | - | chr4_2:4632948-4632967 | None:intergenic | 35.0% | |
| TGTACCTCGAGAAAGAAAAA+AGG | - | chr4_2:4633512-4633531 | None:intergenic | 35.0% | |
| !! | TACATATAGATGCTTGCTGT+TGG | + | chr4_2:4633528-4633547 | Msa0584710:intron | 35.0% |
| ! | TATCACCAATTTCAAGTGGA+TGG | + | chr4_2:4633726-4633745 | Msa0584710:CDS | 35.0% |
| ! | ATCACCAATTTCAAGTGGAT+GGG | + | chr4_2:4633727-4633746 | Msa0584710:CDS | 35.0% |
| CATACAGATAGATGTACAGT+GGG | - | chr4_2:4633862-4633881 | None:intergenic | 35.0% | |
| ACATACAGATAGATGTACAG+TGG | - | chr4_2:4633863-4633882 | None:intergenic | 35.0% | |
| TACATCTATCTGTATGTTCC+AGG | + | chr4_2:4633866-4633885 | Msa0584710:intron | 35.0% | |
| ATCGTCAGAATATGGTGAAA+TGG | - | chr4_2:4634009-4634028 | None:intergenic | 35.0% | |
| CATCTTGGTAGGTGAATTAT+TGG | - | chr4_2:4634099-4634118 | None:intergenic | 35.0% | |
| CCATAATCATTCATCTTGGT+AGG | - | chr4_2:4634110-4634129 | None:intergenic | 35.0% | |
| CCTACCAAGATGAATGATTA+TGG | + | chr4_2:4634107-4634126 | Msa0584710:CDS | 35.0% | |
| CACTATGTCCTTCAAAACTA+TGG | - | chr4_2:4634208-4634227 | None:intergenic | 35.0% | |
| ATGCAATCTCAGAGAAATGA+AGG | + | chr4_2:4634257-4634276 | Msa0584710:CDS | 35.0% | |
| GCAGGTGATGAATAAATATC+AGG | - | chr4_2:4634284-4634303 | None:intergenic | 35.0% | |
| ATTTATTCATCACCTGCTAC+TGG | + | chr4_2:4634287-4634306 | Msa0584710:CDS | 35.0% | |
| !! | GCTTTTAATTCGAACAACTC+TGG | - | chr4_2:4634414-4634433 | None:intergenic | 35.0% |
| TGGTTATAAATTTGGGAGCA+CGG | + | chr4_2:4634510-4634529 | Msa0584710:CDS | 35.0% | |
| TAACCAGATCTTGATCTCTT+TGG | - | chr4_2:4634580-4634599 | None:intergenic | 35.0% | |
| CCGTTTCTCAAGCTAAAATA+TGG | - | chr4_2:4634659-4634678 | None:intergenic | 35.0% | |
| ! | AAGCTAAAATATGGTGACGT+AGG | - | chr4_2:4634698-4634717 | None:intergenic | 35.0% |
| CCGTTTCTCAAGCTAAAATA+TGG | - | chr4_2:4634659-4634678 | None:intergenic | 35.0% | |
| !! | AATATGCCACTGATTTGATG+GGG | - | chr4_2:4634792-4634811 | None:intergenic | 35.0% |
| ! | GACATATTGATGGTAAAGGT+AGG | + | chr4_2:4635064-4635083 | Msa0584710:intron | 35.0% |
| ! | CTTTTCAGAGACAACTCATA+TGG | - | chr4_2:4635166-4635185 | None:intergenic | 35.0% |
| ATAAAGGTTTACGGAAGAGA+AGG | + | chr4_2:4635243-4635262 | Msa0584710:CDS | 35.0% | |
| GAAGGAAACACAATCAAGTT+CGG | + | chr4_2:4635261-4635280 | Msa0584710:CDS | 35.0% | |
| CATGGAATGATCAACCAAAT+TGG | + | chr4_2:4635402-4635421 | Msa0584710:CDS | 35.0% | |
| AAGAGGTGAAAGGACATATT+TGG | + | chr4_2:4635440-4635459 | Msa0584710:CDS | 35.0% | |
| ! | AATGTGAAGGCATGTGATTA+TGG | - | chr4_2:4635512-4635531 | None:intergenic | 35.0% |
| ! | TCTTTTGGCAAAGAATGTGA+AGG | - | chr4_2:4635525-4635544 | None:intergenic | 35.0% |
| CGAAAGTCAAAATTCTCATC+AGG | + | chr4_2:4635584-4635603 | Msa0584710:CDS | 35.0% | |
| TCAAAATTCTCATCAGGAAG+AGG | + | chr4_2:4635590-4635609 | Msa0584710:CDS | 35.0% | |
| ! | TCATTGGTTAATGACTCTGA+AGG | + | chr4_2:4635708-4635727 | Msa0584710:CDS | 35.0% |
| AAATTGGGAAGTGATGCAAT+TGG | + | chr4_2:4635795-4635814 | Msa0584710:CDS | 35.0% | |
| ! | CTACATGTTACTTACGATGA+TGG | + | chr4_2:4636307-4636326 | Msa0584710:CDS | 35.0% |
| TGATGGAAAAGTGAGTATCT+TGG | + | chr4_2:4636324-4636343 | Msa0584710:CDS | 35.0% | |
| !! | TTCGATCTCTTTTGCTTTTG+AGG | - | chr4_2:4636379-4636398 | None:intergenic | 35.0% |
| TTCGCATAAAACAATCCCAA+GGG | - | chr4_2:4636423-4636442 | None:intergenic | 35.0% | |
| TTTCGCATAAAACAATCCCA+AGG | - | chr4_2:4636424-4636443 | None:intergenic | 35.0% | |
| TCCACATAAAACAATCCCAA+GGG | - | chr4_2:4636467-4636486 | None:intergenic | 35.0% | |
| TTTGGGTAAGCATTCTCTAT+TGG | + | chr4_2:4636576-4636595 | Msa0584710:three_prime_UTR | 35.0% | |
| ! | TGGAGCAATTTCAGTTTTCT+TGG | + | chr4_2:4636596-4636615 | Msa0584710:three_prime_UTR | 35.0% |
| ! | GCAATTTCAGTTTTCTTGGA+AGG | + | chr4_2:4636600-4636619 | Msa0584710:three_prime_UTR | 35.0% |
| ACGTTGCTTGTCCAATTACA+TGG | + | chr4_2:4628702-4628721 | Msa0584710:CDS | 40.0% | |
| ! | GTGATTTTCTCGGTGATTCA+CGG | + | chr4_2:4628958-4628977 | Msa0584710:CDS | 40.0% |
| TTTAGTGTTGTCAATTGCGG+CGG | + | chr4_2:4629274-4629293 | Msa0584710:intron | 40.0% | |
| GTTCTAATTCCTCTGTGCAA+CGG | + | chr4_2:4629300-4629319 | Msa0584710:intron | 40.0% | |
| ! | GTTATAGCCCTTTTGCATAG+CGG | - | chr4_2:4629509-4629528 | None:intergenic | 40.0% |
| TATCCTGCACATAAAACCAC+CGG | - | chr4_2:4629974-4629993 | None:intergenic | 40.0% | |
| !! | AACTTTTCAAGCAGCTCCTA+TGG | - | chr4_2:4630133-4630152 | None:intergenic | 40.0% |
| ATAGGAGCTGCTTGAAAAGT+TGG | + | chr4_2:4630132-4630151 | Msa0584710:CDS | 40.0% | |
| TCCCAATAACAAAGCATGGA+AGG | - | chr4_2:4630779-4630798 | None:intergenic | 40.0% | |
| GGTTTCCCAATAACAAAGCA+TGG | - | chr4_2:4630783-4630802 | None:intergenic | 40.0% | |
| !!! | CAGTTGGTTTTAGTGGCTTT+GGG | + | chr4_2:4630802-4630821 | Msa0584710:intron | 40.0% |
| !!! | AGTTGGTTTTAGTGGCTTTG+GGG | + | chr4_2:4630803-4630822 | Msa0584710:intron | 40.0% |
| ACACGTCACAAGGAAATAAG+TGG | - | chr4_2:4630872-4630891 | None:intergenic | 40.0% | |
| TTGCAGACAGTAACAATGGT+AGG | - | chr4_2:4631201-4631220 | None:intergenic | 40.0% | |
| GATACAGACTCTACCTTATG+AGG | - | chr4_2:4631227-4631246 | None:intergenic | 40.0% | |
| TGTGACACTTTGTGTGTTTC+GGG | - | chr4_2:4631341-4631360 | None:intergenic | 40.0% | |
| CTGTGACACTTTGTGTGTTT+CGG | - | chr4_2:4631342-4631361 | None:intergenic | 40.0% | |
| TTTACTCAGATGTGTGGTGT+TGG | + | chr4_2:4631431-4631450 | Msa0584710:intron | 40.0% | |
| !! | AATTTGGCTTTCGTCCAACT+AGG | - | chr4_2:4631575-4631594 | None:intergenic | 40.0% |
| GCGCATTCAGCAAAAGAATT+TGG | - | chr4_2:4631591-4631610 | None:intergenic | 40.0% | |
| TTACTGTCCTGTTTGTCTGA+AGG | + | chr4_2:4632026-4632045 | Msa0584710:CDS | 40.0% | |
| ATTTAGACTCACGGTCCAAA+AGG | - | chr4_2:4632214-4632233 | None:intergenic | 40.0% | |
| ACACATACACAATGTGTGTC+AGG | + | chr4_2:4632438-4632457 | Msa0584710:intron | 40.0% | |
| TACACAATGTGTGTCAGGAA+AGG | + | chr4_2:4632443-4632462 | Msa0584710:intron | 40.0% | |
| ! | CTGACTGATCACACTGTTTT+TGG | + | chr4_2:4632470-4632489 | Msa0584710:intron | 40.0% |
| AGATTCAGAGTCAACACCAA+TGG | + | chr4_2:4632513-4632532 | Msa0584710:CDS | 40.0% | |
| CAATGATCACAGCAAACCAT+TGG | - | chr4_2:4632532-4632551 | None:intergenic | 40.0% | |
| CCAAACCCGATATGTAATAG+TGG | - | chr4_2:4632652-4632671 | None:intergenic | 40.0% | |
| CCACTATTACATATCGGGTT+TGG | + | chr4_2:4632649-4632668 | Msa0584710:intron | 40.0% | |
| GACGTTAAAAATGGGGGTTT+AGG | - | chr4_2:4632905-4632924 | None:intergenic | 40.0% | |
| !! | AGAAATAGTGGATAGCGTAG+CGG | - | chr4_2:4633208-4633227 | None:intergenic | 40.0% |
| !!! | TGCACCTTTTTTCTTTCTCG+AGG | + | chr4_2:4633505-4633524 | Msa0584710:intron | 40.0% |
| TACAAGACAAGGTCAGGAAT+CGG | - | chr4_2:4633615-4633634 | None:intergenic | 40.0% | |
| GATTCCCATCCACTTGAAAT+TGG | - | chr4_2:4633734-4633753 | None:intergenic | 40.0% | |
| TATACATGTCCTACTTGTCG+TGG | + | chr4_2:4633759-4633778 | Msa0584710:CDS | 40.0% | |
| ATACATGTCCTACTTGTCGT+GGG | + | chr4_2:4633760-4633779 | Msa0584710:CDS | 40.0% | |
| TTCACCATATTCTGACGATG+AGG | + | chr4_2:4634010-4634029 | Msa0584710:CDS | 40.0% | |
| CTATCCTCATCGTCAGAATA+TGG | - | chr4_2:4634017-4634036 | None:intergenic | 40.0% | |
| TATTCTGACGATGAGGATAG+TGG | + | chr4_2:4634017-4634036 | Msa0584710:CDS | 40.0% | |
| ATTCTGACGATGAGGATAGT+GGG | + | chr4_2:4634018-4634037 | Msa0584710:CDS | 40.0% | |
| AAAATCCCTGTCTGATTGAC+AGG | - | chr4_2:4634341-4634360 | None:intergenic | 40.0% | |
| TGATGGTCAGTGATGAAGAA+AGG | + | chr4_2:4634384-4634403 | Msa0584710:CDS | 40.0% | |
| ! | ATTTTGGATGGTGAAGAGAG+TGG | + | chr4_2:4634446-4634465 | Msa0584710:CDS | 40.0% |
| GAAAACGTGGTGATAAGTCT+CGG | + | chr4_2:4634468-4634487 | Msa0584710:CDS | 40.0% | |
| GATTTGATGGGGACAAACAA+GGG | - | chr4_2:4634781-4634800 | None:intergenic | 40.0% | |
| TGATTTGATGGGGACAAACA+AGG | - | chr4_2:4634782-4634801 | None:intergenic | 40.0% | |
| TCGCTATGCAACAACAACTA+CGG | + | chr4_2:4634859-4634878 | Msa0584710:intron | 40.0% | |
| TGTGTGCACATGATCTTGAA+TGG | + | chr4_2:4634912-4634931 | Msa0584710:intron | 40.0% | |
| CTTGTTTCCCTTCGTCAAAT+GGG | - | chr4_2:4635013-4635032 | None:intergenic | 40.0% | |
| ACTTGTTTCCCTTCGTCAAA+TGG | - | chr4_2:4635014-4635033 | None:intergenic | 40.0% | |
| TTTGCATTAGATAGCCACGA+TGG | + | chr4_2:4635033-4635052 | Msa0584710:CDS | 40.0% | |
| ! | GCTGGACATATTGATGGTAA+AGG | + | chr4_2:4635060-4635079 | Msa0584710:CDS | 40.0% |
| CTCATACTTAATGCTCAGGA+AGG | - | chr4_2:4635133-4635152 | None:intergenic | 40.0% | |
| ! | TCAGGAAATAGGGTTGATTC+AGG | + | chr4_2:4635207-4635226 | Msa0584710:intron | 40.0% |
| TCTGAATTCAACTTCACCTC+TGG | + | chr4_2:4635303-4635322 | Msa0584710:CDS | 40.0% | |
| ATGATGTGAGATCCCTCTAA+AGG | - | chr4_2:4635363-4635382 | None:intergenic | 40.0% | |
| ACGTTGCACCTAATCCAATT+TGG | - | chr4_2:4635419-4635438 | None:intergenic | 40.0% | |
| ATGAGAACATGGATGCAAAC+TGG | + | chr4_2:4635763-4635782 | Msa0584710:CDS | 40.0% | |
| ATCAGACATCCGATGATTCT+TGG | + | chr4_2:4635835-4635854 | Msa0584710:CDS | 40.0% | |
| AGGCACTAACCAAGAATCAT+CGG | - | chr4_2:4635847-4635866 | None:intergenic | 40.0% | |
| GAGGGGGAAACATAAAATGA+TGG | - | chr4_2:4635992-4636011 | None:intergenic | 40.0% | |
| ACCAGATTATTACTTCGAGG+GGG | - | chr4_2:4636008-4636027 | None:intergenic | 40.0% | |
| CACCAGATTATTACTTCGAG+GGG | - | chr4_2:4636009-4636028 | None:intergenic | 40.0% | |
| CCACCAGATTATTACTTCGA+GGG | - | chr4_2:4636010-4636029 | None:intergenic | 40.0% | |
| ACCACCAGATTATTACTTCG+AGG | - | chr4_2:4636011-4636030 | None:intergenic | 40.0% | |
| TGTGCCTGGACAAAAATGTA+AGG | - | chr4_2:4636249-4636268 | None:intergenic | 40.0% | |
| ! | TACATTTTTGTCCAGGCACA+AGG | + | chr4_2:4636249-4636268 | Msa0584710:intron | 40.0% |
| ! | ACATTTTTGTCCAGGCACAA+GGG | + | chr4_2:4636250-4636269 | Msa0584710:intron | 40.0% |
| AAGTGAGTATCTTGGAACTC+AGG | + | chr4_2:4636332-4636351 | Msa0584710:CDS | 40.0% | |
| TATCTTGGAACTCAGGAAAC+AGG | + | chr4_2:4636339-4636358 | Msa0584710:CDS | 40.0% | |
| ATCTTGGAACTCAGGAAACA+GGG | + | chr4_2:4636340-4636359 | Msa0584710:CDS | 40.0% | |
| ACATAAAACAATCCCAAGGG+TGG | - | chr4_2:4636464-4636483 | None:intergenic | 40.0% | |
| !! | ACCCTTGGGATTGTTTTATG+TGG | + | chr4_2:4636419-4636438 | Msa0584710:intron | 40.0% |
| CTCCACATAAAACAATCCCA+AGG | - | chr4_2:4636468-4636487 | None:intergenic | 40.0% | |
| AGATCCTGCAGTTCAGAAAA+GGG | - | chr4_2:4636647-4636666 | None:intergenic | 40.0% | |
| AAGATCCTGCAGTTCAGAAA+AGG | - | chr4_2:4636648-4636667 | None:intergenic | 40.0% | |
| GATTTCTGCCTGTTATGTAC+AGG | + | chr4_2:4636732-4636751 | Msa0584710:three_prime_UTR | 40.0% | |
| GCCACCATTACTGTAGAATA+GGG | + | chr4_2:4636754-4636773 | Msa0584710:three_prime_UTR | 40.0% | |
| TCCCTATTCTACAGTAATGG+TGG | - | chr4_2:4636758-4636777 | None:intergenic | 40.0% | |
| ACCATTACTGTAGAATAGGG+AGG | + | chr4_2:4636757-4636776 | Msa0584710:three_prime_UTR | 40.0% | |
| CCATTACTGTAGAATAGGGA+GGG | + | chr4_2:4636758-4636777 | Msa0584710:three_prime_UTR | 40.0% | |
| ! | GACGAAGGATTTTCTCGATG+AGG | + | chr4_2:4628923-4628942 | Msa0584710:CDS | 45.0% |
| ! | TTTTCTCGGTGATTCACGGA+AGG | + | chr4_2:4628962-4628981 | Msa0584710:CDS | 45.0% |
| !! | TGGTGGAACGATTCAAGTTG+CGG | + | chr4_2:4628989-4629008 | Msa0584710:CDS | 45.0% |
| CTAACAGCAACAATTTCCGG+CGG | - | chr4_2:4629038-4629057 | None:intergenic | 45.0% | |
| CCGCTAACAGCAACAATTTC+CGG | - | chr4_2:4629041-4629060 | None:intergenic | 45.0% | |
| ! | CCGGAAATTGTTGCTGTTAG+CGG | + | chr4_2:4629038-4629057 | Msa0584710:CDS | 45.0% |
| ! | GAAATTGTTGCTGTTAGCGG+TGG | + | chr4_2:4629041-4629060 | Msa0584710:CDS | 45.0% |
| ! | AGCATCACGCTTAGCTTTCA+TGG | - | chr4_2:4629105-4629124 | None:intergenic | 45.0% |
| CGTGATGCTCTTCAGAGAAA+AGG | + | chr4_2:4629116-4629135 | Msa0584710:CDS | 45.0% | |
| TATGCTAGGAGGCTTGAATC+TGG | + | chr4_2:4629167-4629186 | Msa0584710:CDS | 45.0% | |
| !!! | GGCGATGTTGTGGTTAGTTT+TGG | + | chr4_2:4629188-4629207 | Msa0584710:intron | 45.0% |
| ACAATTTCACCGTTGCACAG+AGG | - | chr4_2:4629312-4629331 | None:intergenic | 45.0% | |
| AAAATTGAGCTGTGGAGTCG+TGG | + | chr4_2:4629367-4629386 | Msa0584710:intron | 45.0% | |
| AAATTGAGCTGTGGAGTCGT+GGG | + | chr4_2:4629368-4629387 | Msa0584710:intron | 45.0% | |
| TGCAAGTCAGTTGCGAATTG+TGG | + | chr4_2:4629462-4629481 | Msa0584710:intron | 45.0% | |
| ATGCAAAAGGGCTATAACGC+CGG | + | chr4_2:4629511-4629530 | Msa0584710:intron | 45.0% | |
| GTGTTGTCAAATATCGGCCA+TGG | + | chr4_2:4629566-4629585 | Msa0584710:intron | 45.0% | |
| ! | ATCTGCATCGATATCTGCTG+TGG | - | chr4_2:4629597-4629616 | None:intergenic | 45.0% |
| !!! | AGACCGGTATGTCGGTTTTT+TGG | + | chr4_2:4629675-4629694 | Msa0584710:intron | 45.0% |
| AGGCCAAAAAACCGACATAC+CGG | - | chr4_2:4629681-4629700 | None:intergenic | 45.0% | |
| ACAGGGGCAATCCAATGTAA+AGG | + | chr4_2:4630019-4630038 | Msa0584710:CDS | 45.0% | |
| CGACACAGAATGAAAACACG+TGG | - | chr4_2:4630215-4630234 | None:intergenic | 45.0% | |
| CTGAATGACAGCATAGACAC+AGG | - | chr4_2:4630642-4630661 | None:intergenic | 45.0% | |
| !!! | GGGAAACCAGTTGGTTTTAG+TGG | + | chr4_2:4630795-4630814 | Msa0584710:intron | 45.0% |
| CCAAAGCCACTAAAACCAAC+TGG | - | chr4_2:4630804-4630823 | None:intergenic | 45.0% | |
| !!! | CCAGTTGGTTTTAGTGGCTT+TGG | + | chr4_2:4630801-4630820 | Msa0584710:intron | 45.0% |
| !!! | GTTGGTTTTAGTGGCTTTGG+GGG | + | chr4_2:4630804-4630823 | Msa0584710:intron | 45.0% |
| ! | GTGCTTCATTTAGGTGCCAT+TGG | + | chr4_2:4630909-4630928 | Msa0584710:intron | 45.0% |
| CATGAACTTACTGGGATCAC+CGG | - | chr4_2:4631156-4631175 | None:intergenic | 45.0% | |
| GAGGTTGCAGACAGTAACAA+TGG | - | chr4_2:4631205-4631224 | None:intergenic | 45.0% | |
| ACAGACTCTACCTTATGAGG+AGG | - | chr4_2:4631224-4631243 | None:intergenic | 45.0% | |
| GTGTGTTTCGGGCACAAATA+GGG | - | chr4_2:4631330-4631349 | None:intergenic | 45.0% | |
| TGTGTGTTTCGGGCACAAAT+AGG | - | chr4_2:4631331-4631350 | None:intergenic | 45.0% | |
| TTTACTGCCTGCTACTCTGA+GGG | + | chr4_2:4631657-4631676 | Msa0584710:intron | 45.0% | |
| TTCAAAACCCTCAGAGTAGC+AGG | - | chr4_2:4631667-4631686 | None:intergenic | 45.0% | |
| AGATGATACTGCAGTACTGC+TGG | - | chr4_2:4631810-4631829 | None:intergenic | 45.0% | |
| ! | TCCTGTTTGTCTGAAGGTAC+CGG | + | chr4_2:4632032-4632051 | Msa0584710:intron | 45.0% |
| TGGACCGTGAGTCTAAATGT+AGG | + | chr4_2:4632216-4632235 | Msa0584710:intron | 45.0% | |
| AGAGAGAAAATGGAGAGGCA+GGG | - | chr4_2:4632943-4632962 | None:intergenic | 45.0% | |
| AAGAGAGAAAATGGAGAGGC+AGG | - | chr4_2:4632944-4632963 | None:intergenic | 45.0% | |
| !! | GAAATAGTGGATAGCGTAGC+GGG | - | chr4_2:4633207-4633226 | None:intergenic | 45.0% |
| TACATGTCCTACTTGTCGTG+GGG | + | chr4_2:4633761-4633780 | Msa0584710:CDS | 45.0% | |
| TAACATTCCCCACGACAAGT+AGG | - | chr4_2:4633771-4633790 | None:intergenic | 45.0% | |
| TTGTCGTGGGGAATGTTATC+AGG | + | chr4_2:4633773-4633792 | Msa0584710:CDS | 45.0% | |
| GTTCCAGGTCAAGAATCTTG+AGG | + | chr4_2:4633881-4633900 | Msa0584710:intron | 45.0% | |
| CATCCTCAAGATTCTTGACC+TGG | - | chr4_2:4633887-4633906 | None:intergenic | 45.0% | |
| AGGATGCTGTTCAAGAGCTT+TGG | + | chr4_2:4633901-4633920 | Msa0584710:CDS | 45.0% | |
| ! | ATGCTGTTCAAGAGCTTTGG+AGG | + | chr4_2:4633904-4633923 | Msa0584710:CDS | 45.0% |
| GGACTCTCTGTCATTCATGA+CGG | + | chr4_2:4634166-4634185 | Msa0584710:CDS | 45.0% | |
| GACTCTCTGTCATTCATGAC+GGG | + | chr4_2:4634167-4634186 | Msa0584710:CDS | 45.0% | |
| !!! | GATGCACGCCATAGTTTTGA+AGG | + | chr4_2:4634197-4634216 | Msa0584710:CDS | 45.0% |
| TCTTGTCCTGTCAATCAGAC+AGG | + | chr4_2:4634332-4634351 | Msa0584710:CDS | 45.0% | |
| CTTGTCCTGTCAATCAGACA+GGG | + | chr4_2:4634333-4634352 | Msa0584710:CDS | 45.0% | |
| ACGCTTGCATTATCAGACAG+TGG | - | chr4_2:4634557-4634576 | None:intergenic | 45.0% | |
| CGTCCAAAGAGATCAAGATC+TGG | + | chr4_2:4634574-4634593 | Msa0584710:CDS | 45.0% | |
| CAAGATCTGGTTACTGCCAA+TGG | + | chr4_2:4634587-4634606 | Msa0584710:CDS | 45.0% | |
| !!! | TTTTAGCTTGAGAAACGGGG+TGG | + | chr4_2:4634661-4634680 | Msa0584710:intron | 45.0% |
| !! | TTTAGCTTGAGAAACGGGGT+GGG | + | chr4_2:4634662-4634681 | Msa0584710:intron | 45.0% |
| !!! | TTTTAGCTTGAGAAACGGGG+TGG | + | chr4_2:4634661-4634680 | Msa0584710:intron | 45.0% |
| !! | TTTAGCTTGAGAAACGGGGT+GGG | + | chr4_2:4634662-4634681 | Msa0584710:intron | 45.0% |
| GTTTGTCCCCATCAAATCAG+TGG | + | chr4_2:4634783-4634802 | Msa0584710:intron | 45.0% | |
| AAATCCAGCCCATTTGACGA+AGG | + | chr4_2:4635002-4635021 | Msa0584710:CDS | 45.0% | |
| AATCCAGCCCATTTGACGAA+GGG | + | chr4_2:4635003-4635022 | Msa0584710:CDS | 45.0% | |
| TTCAACTTCACCTCTGGTAG+AGG | + | chr4_2:4635309-4635328 | Msa0584710:CDS | 45.0% | |
| CTCTGGTAGAGGCAATATGT+CGG | + | chr4_2:4635320-4635339 | Msa0584710:CDS | 45.0% | |
| GTAGAGGCAATATGTCGGAT+GGG | + | chr4_2:4635325-4635344 | Msa0584710:CDS | 45.0% | |
| TAGAGGCAATATGTCGGATG+GGG | + | chr4_2:4635326-4635345 | Msa0584710:CDS | 45.0% | |
| ! | GGTGAAGTTGGTCCTTTAGA+GGG | + | chr4_2:4635348-4635367 | Msa0584710:CDS | 45.0% |
| TAGAGGGATCTCACATCATG+CGG | + | chr4_2:4635364-4635383 | Msa0584710:CDS | 45.0% | |
| TATTTGGCGAAGCAGTCAGA+AGG | + | chr4_2:4635456-4635475 | Msa0584710:CDS | 45.0% | |
| AGAGGAGAAGACCACAATCA+AGG | + | chr4_2:4635608-4635627 | Msa0584710:CDS | 45.0% | |
| GAGGAGAAGACCACAATCAA+GGG | + | chr4_2:4635609-4635628 | Msa0584710:CDS | 45.0% | |
| TCCCCCTCGAAGTAATAATC+TGG | + | chr4_2:4636004-4636023 | Msa0584710:intron | 45.0% | |
| CCCTCGAAGTAATAATCTGG+TGG | + | chr4_2:4636007-4636026 | Msa0584710:intron | 45.0% | |
| AAACCCAAGTTATCCACCCT+TGG | + | chr4_2:4636404-4636423 | Msa0584710:exon | 45.0% | |
| AACCCAAGTTATCCACCCTT+GGG | + | chr4_2:4636405-4636424 | Msa0584710:exon | 45.0% | |
| ATCCCAAGGGTGGATAACTT+GGG | - | chr4_2:4636410-4636429 | None:intergenic | 45.0% | |
| AATCCCAAGGGTGGATAACT+TGG | - | chr4_2:4636411-4636430 | None:intergenic | 45.0% | |
| GCATAAAACAATCCCAAGGG+TGG | - | chr4_2:4636420-4636439 | None:intergenic | 45.0% | |
| AAACCCAAGTTATCCACCCT+TGG | + | chr4_2:4636404-4636423 | Msa0584710:exon | 45.0% | |
| AACCCAAGTTATCCACCCTT+GGG | + | chr4_2:4636405-4636424 | Msa0584710:exon | 45.0% | |
| ATCCCAAGGGTGGATAACTT+GGG | - | chr4_2:4636410-4636429 | None:intergenic | 45.0% | |
| AATCCCAAGGGTGGATAACT+TGG | - | chr4_2:4636411-4636430 | None:intergenic | 45.0% | |
| CCAAAAACCAGCAGCAATCT+GGG | - | chr4_2:4636561-4636580 | None:intergenic | 45.0% | |
| !!! | CCAGATTGCTGCTGGTTTTT+GGG | + | chr4_2:4636559-4636578 | Msa0584710:three_prime_UTR | 45.0% |
| TGCAGTTCAGAAAAGGGCTT+CGG | - | chr4_2:4636641-4636660 | None:intergenic | 45.0% | |
| AATGGTGGCCTGTACATAAC+AGG | - | chr4_2:4636743-4636762 | None:intergenic | 45.0% | |
| GGCCACCATTACTGTAGAAT+AGG | + | chr4_2:4636753-4636772 | Msa0584710:three_prime_UTR | 45.0% | |
| CCCTCCCTATTCTACAGTAA+TGG | - | chr4_2:4636761-4636780 | None:intergenic | 45.0% | |
| !!! | AATTGAATTTTAATATATAT+GGG | - | chr4_2:4628534-4628553 | None:intergenic | 5.0% |
| !! | ATATATATATATATATATGT+CGG | - | chr4_2:4630957-4630976 | None:intergenic | 5.0% |
| GTAAGTATAAGGCGACGTCG+TGG | - | chr4_2:4628470-4628489 | None:intergenic | 50.0% | |
| TTCGTTCCGTTCAGAGAACG+CGG | - | chr4_2:4628897-4628916 | None:intergenic | 50.0% | |
| GGTGATTCACGGAAGGAAGA+TGG | + | chr4_2:4628969-4628988 | Msa0584710:CDS | 50.0% | |
| GATTCACGGAAGGAAGATGG+TGG | + | chr4_2:4628972-4628991 | Msa0584710:CDS | 50.0% | |
| ! | ATTGTTGCTGTTAGCGGTGG+TGG | + | chr4_2:4629044-4629063 | Msa0584710:CDS | 50.0% |
| TGCTGCTATGATTGCTGCTG+AGG | + | chr4_2:4629142-4629161 | Msa0584710:CDS | 50.0% | |
| ! | TTGCTGCTGAGGAGTATGCT+AGG | + | chr4_2:4629153-4629172 | Msa0584710:CDS | 50.0% |
| GCTTGAATCTGGCGATGTTG+TGG | + | chr4_2:4629178-4629197 | Msa0584710:CDS | 50.0% | |
| ! | GTGTTGTCGGTTGCGAATTG+CGG | + | chr4_2:4629412-4629431 | Msa0584710:intron | 50.0% |
| !! | TTCGCAACTGACTTGCACAG+CGG | - | chr4_2:4629459-4629478 | None:intergenic | 50.0% |
| CCATATGCAGACCGGTATGT+CGG | + | chr4_2:4629667-4629686 | Msa0584710:intron | 50.0% | |
| !! | ATGTTGTCGATAGCGGACCA+CGG | - | chr4_2:4629708-4629727 | None:intergenic | 50.0% |
| !!! | TGACCGGTGGTTTTATGTGC+AGG | + | chr4_2:4629968-4629987 | Msa0584710:intron | 50.0% |
| TGCAATCGTGTCGAGAACGA+AGG | + | chr4_2:4630056-4630075 | Msa0584710:CDS | 50.0% | |
| CCTCACAAATTCGGCAAGCA+CGG | - | chr4_2:4630278-4630297 | None:intergenic | 50.0% | |
| GCTTCATCTAGGCTTGCAGA+AGG | + | chr4_2:4631129-4631148 | Msa0584710:intron | 50.0% | |
| ATCTAGGCTTGCAGAAGGAC+CGG | + | chr4_2:4631134-4631153 | Msa0584710:intron | 50.0% | |
| CTGTCTGCAACCTCCTCATA+AGG | + | chr4_2:4631211-4631230 | Msa0584710:CDS | 50.0% | |
| TAGTCCATTCCCAGGGACAT+TGG | - | chr4_2:4631373-4631392 | None:intergenic | 50.0% | |
| TCACGCTTAGTCCATTCCCA+GGG | - | chr4_2:4631380-4631399 | None:intergenic | 50.0% | |
| CTTTACTGCCTGCTACTCTG+AGG | + | chr4_2:4631656-4631675 | Msa0584710:intron | 50.0% | |
| TACACGTGCTGTGATGCATG+TGG | + | chr4_2:4631982-4632001 | Msa0584710:CDS | 50.0% | |
| ACCGGTACCTTCAGACAAAC+AGG | - | chr4_2:4632036-4632055 | None:intergenic | 50.0% | |
| CTGTGATCATTGCCAACGCT+GGG | + | chr4_2:4632540-4632559 | Msa0584710:CDS | 50.0% | |
| TAGCACATCAGCTTTCGTCG+TGG | - | chr4_2:4632680-4632699 | None:intergenic | 50.0% | |
| GAGAGAAAATGGAGAGGCAG+GGG | - | chr4_2:4632942-4632961 | None:intergenic | 50.0% | |
| TGACTCAAGCTTCCAGTAGC+AGG | - | chr4_2:4634302-4634321 | None:intergenic | 50.0% | |
| GGTGAAGAGAGTGGAAAACG+TGG | + | chr4_2:4634455-4634474 | Msa0584710:CDS | 50.0% | |
| TTTCCCTTCGTCAAATGGGC+TGG | - | chr4_2:4635009-4635028 | None:intergenic | 50.0% | |
| GGAGCAGCTGGACATATTGA+TGG | + | chr4_2:4635054-4635073 | Msa0584710:CDS | 50.0% | |
| CGACATATTGCCTCTACCAG+AGG | - | chr4_2:4635322-4635341 | None:intergenic | 50.0% | |
| GGTAGAGGCAATATGTCGGA+TGG | + | chr4_2:4635324-4635343 | Msa0584710:CDS | 50.0% | |
| AGAGGCAATATGTCGGATGG+GGG | + | chr4_2:4635327-4635346 | Msa0584710:CDS | 50.0% | |
| ! | GGGTGAAGTTGGTCCTTTAG+AGG | + | chr4_2:4635347-4635366 | Msa0584710:CDS | 50.0% |
| AGAGGGATCTCACATCATGC+GGG | + | chr4_2:4635365-4635384 | Msa0584710:CDS | 50.0% | |
| CGGGGAAAACGTAGTACTCA+TGG | + | chr4_2:4635384-4635403 | Msa0584710:CDS | 50.0% | |
| GGATTAGGTGCAACGTCAAG+AGG | + | chr4_2:4635423-4635442 | Msa0584710:CDS | 50.0% | |
| GTGCAACGTCAAGAGGTGAA+AGG | + | chr4_2:4635430-4635449 | Msa0584710:CDS | 50.0% | |
| TCAAGGGCCAGAGGTCAAAA+AGG | + | chr4_2:4635625-4635644 | Msa0584710:CDS | 50.0% | |
| GCCAGAGGTCAAAAAGGAAG+AGG | + | chr4_2:4635631-4635650 | Msa0584710:CDS | 50.0% | |
| ! | GCCTCTTCCTTTTTGACCTC+TGG | - | chr4_2:4635635-4635654 | None:intergenic | 50.0% |
| ! | GAAGGTGCAAGTCAATCTCC+TGG | + | chr4_2:4635726-4635745 | Msa0584710:CDS | 50.0% |
| GAGGTGACTGGTGTAGTTGA+AGG | + | chr4_2:4636274-4636293 | Msa0584710:CDS | 50.0% | |
| AAAACCAGCAGCAATCTGGG+CGG | - | chr4_2:4636558-4636577 | None:intergenic | 50.0% | |
| !!! | CCCAGATTGCTGCTGGTTTT+TGG | + | chr4_2:4636558-4636577 | Msa0584710:three_prime_UTR | 50.0% |
| CCCAAAAACCAGCAGCAATC+TGG | - | chr4_2:4636562-4636581 | None:intergenic | 50.0% | |
| GTTCAGAAAAGGGCTTCGGT+AGG | - | chr4_2:4636637-4636656 | None:intergenic | 50.0% | |
| ! | GAAGCCCTTTTCTGAACTGC+AGG | + | chr4_2:4636640-4636659 | Msa0584710:three_prime_UTR | 50.0% |
| GGGTTTCCGCGTTCTCTGAA+CGG | + | chr4_2:4628888-4628907 | Msa0584710:CDS | 55.0% | |
| ! | TCAAGTTGCGGTGCCGAAAG+TGG | + | chr4_2:4629001-4629020 | Msa0584710:CDS | 55.0% |
| ACAGCAACAATTTCCGGCGG+CGG | - | chr4_2:4629035-4629054 | None:intergenic | 55.0% | |
| ! | CTGCTGAGGAGTATGCTAGG+AGG | + | chr4_2:4629156-4629175 | Msa0584710:CDS | 55.0% |
| TATCTGCTGTGGCATCGCCA+TGG | - | chr4_2:4629586-4629605 | None:intergenic | 55.0% | |
| CCGACATACCGGTCTGCATA+TGG | - | chr4_2:4629670-4629689 | None:intergenic | 55.0% | |
| !!! | GGTTTTTTGGCCTTTCGCCG+TGG | + | chr4_2:4629688-4629707 | Msa0584710:intron | 55.0% |
| ACAAATTCGGCAAGCACGGC+AGG | - | chr4_2:4630274-4630293 | None:intergenic | 55.0% | |
| CCGTGCTTGCCGAATTTGTG+AGG | + | chr4_2:4630275-4630294 | Msa0584710:CDS | 55.0% | |
| GGTGACTGCATCAACGCCAA+TGG | - | chr4_2:4630928-4630947 | None:intergenic | 55.0% | |
| AGTTGCGCATCCAATGTCCC+TGG | + | chr4_2:4631360-4631379 | Msa0584710:CDS | 55.0% | |
| GTTGCGCATCCAATGTCCCT+GGG | + | chr4_2:4631361-4631380 | Msa0584710:CDS | 55.0% | |
| GCATCCAATGTCCCTGGGAA+TGG | + | chr4_2:4631366-4631385 | Msa0584710:CDS | 55.0% | |
| CTCACGCTTAGTCCATTCCC+AGG | - | chr4_2:4631381-4631400 | None:intergenic | 55.0% | |
| !! | CTGGGAATGGACTAAGCGTG+AGG | + | chr4_2:4631379-4631398 | Msa0584710:CDS | 55.0% |
| GCTGTGATCATTGCCAACGC+TGG | + | chr4_2:4632539-4632558 | Msa0584710:CDS | 55.0% | |
| ACTGGCAATGTACCCAGCGT+TGG | - | chr4_2:4632555-4632574 | None:intergenic | 55.0% | |
| !! | GCTTTTTGCATCGGCGACTG+TGG | + | chr4_2:4632731-4632750 | Msa0584710:intron | 55.0% |
| TGGGTGACGACTGACGAGAT+GGG | + | chr4_2:4632866-4632885 | Msa0584710:intron | 55.0% | |
| AGAAAATGGAGAGGCAGGGG+TGG | - | chr4_2:4632939-4632958 | None:intergenic | 55.0% | |
| TATGTCCAGCTGCTCCATCG+TGG | - | chr4_2:4635050-4635069 | None:intergenic | 55.0% | |
| ATGTCGGATGGGGGTGAAGT+TGG | + | chr4_2:4635336-4635355 | Msa0584710:CDS | 55.0% | |
| GAGGGATCTCACATCATGCG+GGG | + | chr4_2:4635366-4635385 | Msa0584710:CDS | 55.0% | |
| AGACCACAATCAAGGGCCAG+AGG | + | chr4_2:4635616-4635635 | Msa0584710:CDS | 55.0% | |
| TGACCTCTGGCCCTTGATTG+TGG | - | chr4_2:4635622-4635641 | None:intergenic | 55.0% | |
| TTTGTCCAGGCACAAGGGAG+AGG | + | chr4_2:4636255-4636274 | Msa0584710:intron | 55.0% | |
| AATAGGGAGGGATGTGCCCT+AGG | + | chr4_2:4636770-4636789 | Msa0584710:three_prime_UTR | 55.0% | |
| AAGGCGACGTCGTGGAGATG+AGG | - | chr4_2:4628462-4628481 | None:intergenic | 60.0% | |
| CGGAACGAAGAACGCGACGA+AGG | + | chr4_2:4628908-4628927 | Msa0584710:CDS | 60.0% | |
| ! | GTTGCTGTTAGCGGTGGTGG+TGG | + | chr4_2:4629047-4629066 | Msa0584710:CDS | 60.0% |
| !! | TGGTGGTGGTGGTGGTGATG+TGG | + | chr4_2:4629064-4629083 | Msa0584710:CDS | 60.0% |
| TGCATATGGCGTCGTGGCAC+TGG | - | chr4_2:4629656-4629675 | None:intergenic | 60.0% | |
| CCACGACGCCATATGCAGAC+CGG | + | chr4_2:4629659-4629678 | Msa0584710:intron | 60.0% | |
| GTGGGTGACGACTGACGAGA+TGG | + | chr4_2:4632865-4632884 | Msa0584710:intron | 60.0% | |
| GGGTGACGACTGACGAGATG+GGG | + | chr4_2:4632867-4632886 | Msa0584710:intron | 60.0% | |
| GATAGCCACGATGGAGCAGC+TGG | + | chr4_2:4635042-4635061 | Msa0584710:CDS | 60.0% | |
| AGTCACCTCTCCCTTGTGCC+TGG | - | chr4_2:4636263-4636282 | None:intergenic | 60.0% | |
| AGGCACAAGGGAGAGGTGAC+TGG | + | chr4_2:4636262-4636281 | Msa0584710:intron | 60.0% | |
| TTAGCCGCCCAGATTGCTGC+TGG | + | chr4_2:4636551-4636570 | Msa0584710:three_prime_UTR | 60.0% | |
| GCAACAATTTCCGGCGGCGG+CGG | - | chr4_2:4629032-4629051 | None:intergenic | 65.0% | |
| !! | GCTGTTAGCGGTGGTGGTGG+TGG | + | chr4_2:4629050-4629069 | Msa0584710:CDS | 65.0% |
| !! | GTTAGCGGTGGTGGTGGTGG+TGG | + | chr4_2:4629053-4629072 | Msa0584710:CDS | 65.0% |
| CCGGTCTGCATATGGCGTCG+TGG | - | chr4_2:4629662-4629681 | None:intergenic | 65.0% | |
| !! | CGATAGCGGACCACGGCGAA+AGG | - | chr4_2:4629701-4629720 | None:intergenic | 65.0% |
| ACCAGCTTGAGGGCTGCAGC+TGG | + | chr4_2:4633957-4633976 | Msa0584710:CDS | 65.0% | |
| ACCAGCTGCAGCCCTCAAGC+TGG | - | chr4_2:4633961-4633980 | None:intergenic | 65.0% | |
| GGCGGCGGTGGCACCACTTT+CGG | - | chr4_2:4629017-4629036 | None:intergenic | 70.0% | |
| ACAATTTCCGGCGGCGGCGG+TGG | - | chr4_2:4629029-4629048 | None:intergenic | 70.0% | |
| !! | AGCGGTGGTGGTGGTGGTGG+TGG | + | chr4_2:4629056-4629075 | Msa0584710:CDS | 70.0% |
| !!! | AGTGGTGCCACCGCCGCCGC+CGG | + | chr4_2:4629019-4629038 | Msa0584710:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 4628459 | 4636913 | 4628459 | ID=Msa0584710;Name=Msa0584710 |
| chr4_2 | mRNA | 4628459 | 4636913 | 4628459 | ID=Msa0584710-mRNA-1;Parent=Msa0584710;Name=Msa0584710-mRNA-1;_AED=0.05;_eAED=0.05;_QI=233|1|1|1|0.76|0.78|14|464|871 |
| chr4_2 | exon | 4628459 | 4628723 | 4628459 | ID=Msa0584710-mRNA-1:exon:1168;Parent=Msa0584710-mRNA-1 |
| chr4_2 | exon | 4628863 | 4629199 | 4628863 | ID=Msa0584710-mRNA-1:exon:1169;Parent=Msa0584710-mRNA-1 |
| chr4_2 | exon | 4629990 | 4630167 | 4629990 | ID=Msa0584710-mRNA-1:exon:1170;Parent=Msa0584710-mRNA-1 |
| chr4_2 | exon | 4630247 | 4630296 | 4630247 | ID=Msa0584710-mRNA-1:exon:1171;Parent=Msa0584710-mRNA-1 |
| chr4_2 | exon | 4631140 | 4631232 | 4631140 | ID=Msa0584710-mRNA-1:exon:1172;Parent=Msa0584710-mRNA-1 |
| chr4_2 | exon | 4631312 | 4631400 | 4631312 | ID=Msa0584710-mRNA-1:exon:1173;Parent=Msa0584710-mRNA-1 |
| chr4_2 | exon | 4631969 | 4632047 | 4631969 | ID=Msa0584710-mRNA-1:exon:1174;Parent=Msa0584710-mRNA-1 |
| chr4_2 | exon | 4632505 | 4632587 | 4632505 | ID=Msa0584710-mRNA-1:exon:1175;Parent=Msa0584710-mRNA-1 |
| chr4_2 | exon | 4633716 | 4633794 | 4633716 | ID=Msa0584710-mRNA-1:exon:1176;Parent=Msa0584710-mRNA-1 |
| chr4_2 | exon | 4633888 | 4634608 | 4633888 | ID=Msa0584710-mRNA-1:exon:1177;Parent=Msa0584710-mRNA-1 |
| chr4_2 | exon | 4634995 | 4635081 | 4634995 | ID=Msa0584710-mRNA-1:exon:1178;Parent=Msa0584710-mRNA-1 |
| chr4_2 | exon | 4635211 | 4635856 | 4635211 | ID=Msa0584710-mRNA-1:exon:1179;Parent=Msa0584710-mRNA-1 |
| chr4_2 | exon | 4636264 | 4636426 | 4636264 | ID=Msa0584710-mRNA-1:exon:1180;Parent=Msa0584710-mRNA-1 |
| chr4_2 | exon | 4636471 | 4636913 | 4636471 | ID=Msa0584710-mRNA-1:exon:1181;Parent=Msa0584710-mRNA-1 |
| chr4_2 | five_prime_UTR | 4628459 | 4628691 | 4628459 | ID=Msa0584710-mRNA-1:five_prime_utr;Parent=Msa0584710-mRNA-1 |
| chr4_2 | CDS | 4628692 | 4628723 | 4628692 | ID=Msa0584710-mRNA-1:cds;Parent=Msa0584710-mRNA-1 |
| chr4_2 | CDS | 4628863 | 4629199 | 4628863 | ID=Msa0584710-mRNA-1:cds;Parent=Msa0584710-mRNA-1 |
| chr4_2 | CDS | 4629990 | 4630167 | 4629990 | ID=Msa0584710-mRNA-1:cds;Parent=Msa0584710-mRNA-1 |
| chr4_2 | CDS | 4630247 | 4630296 | 4630247 | ID=Msa0584710-mRNA-1:cds;Parent=Msa0584710-mRNA-1 |
| chr4_2 | CDS | 4631140 | 4631232 | 4631140 | ID=Msa0584710-mRNA-1:cds;Parent=Msa0584710-mRNA-1 |
| chr4_2 | CDS | 4631312 | 4631400 | 4631312 | ID=Msa0584710-mRNA-1:cds;Parent=Msa0584710-mRNA-1 |
| chr4_2 | CDS | 4631969 | 4632047 | 4631969 | ID=Msa0584710-mRNA-1:cds;Parent=Msa0584710-mRNA-1 |
| chr4_2 | CDS | 4632505 | 4632587 | 4632505 | ID=Msa0584710-mRNA-1:cds;Parent=Msa0584710-mRNA-1 |
| chr4_2 | CDS | 4633716 | 4633794 | 4633716 | ID=Msa0584710-mRNA-1:cds;Parent=Msa0584710-mRNA-1 |
| chr4_2 | CDS | 4633888 | 4634608 | 4633888 | ID=Msa0584710-mRNA-1:cds;Parent=Msa0584710-mRNA-1 |
| chr4_2 | CDS | 4634995 | 4635081 | 4634995 | ID=Msa0584710-mRNA-1:cds;Parent=Msa0584710-mRNA-1 |
| chr4_2 | CDS | 4635211 | 4635856 | 4635211 | ID=Msa0584710-mRNA-1:cds;Parent=Msa0584710-mRNA-1 |
| chr4_2 | CDS | 4636264 | 4636405 | 4636264 | ID=Msa0584710-mRNA-1:cds;Parent=Msa0584710-mRNA-1 |
| chr4_2 | three_prime_UTR | 4636406 | 4636426 | 4636406 | ID=Msa0584710-mRNA-1:three_prime_utr;Parent=Msa0584710-mRNA-1 |
| chr4_2 | three_prime_UTR | 4636471 | 4636913 | 4636471 | ID=Msa0584710-mRNA-1:three_prime_utr;Parent=Msa0584710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
