AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0794140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0794140 MtrunA17_Chr5g0395161 96.984 1459 42 1 1 1459 1 1457 0.0 2894
Msa0794140 MtrunA17_Chr4g0021221 52.817 1189 444 26 19 1132 1 1147 0.0 1038
Msa0794140 MtrunA17_Chr4g0021221 46.865 303 132 7 1177 1459 1101 1394 7.69e-50 194
Msa0794140 MtrunA17_Chr7g0274691 38.971 136 49 2 803 905 57 191 7.98e-23 97.8
Msa0794140 MtrunA17_Chr6g0467521 38.406 138 83 2 784 921 771 906 3.60e-22 103
Msa0794140 MtrunA17_Chr6g0463241 39.259 135 77 4 784 917 759 889 5.20e-20 97.1
Msa0794140 MtrunA17_Chr1g0202211 33.793 145 96 0 779 923 218 362 1.60e-19 92.4
Msa0794140 MtrunA17_Chr5g0448201 32.231 121 82 0 803 923 98 218 2.08e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0794140 AT5G16680.1 38.484 1029 486 34 2 939 18 990 2.39e-150 492
Msa0794140 AT5G16680.2 38.484 1029 486 34 2 939 18 990 2.39e-150 492
Msa0794140 AT3G02890.1 34.888 986 438 29 1 934 17 850 1.08e-128 425
Msa0794140 AT3G02890.4 34.375 960 426 29 1 908 17 824 1.15e-117 390
Msa0794140 AT3G02890.2 37.500 752 342 20 213 934 138 791 1.53e-115 387
Msa0794140 AT3G02890.3 32.823 914 410 29 1 862 17 778 1.17e-95 327
Msa0794140 AT1G43770.3 36.429 140 82 3 784 920 292 427 4.64e-22 101
Msa0794140 AT1G43770.2 36.429 140 82 3 784 920 292 427 4.64e-22 101
Msa0794140 AT4G17850.1 36.290 124 62 5 217 334 25 137 8.00e-15 75.1

Find 343 sgRNAs with CRISPR-Local

Find 655 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGTCCTCGGCTTCTTTC+TGG 0.103963 5_3:+5958794 None:intergenic
TCTTTCTTCCTGTAAATTTC+AGG 0.169852 5_3:+5962119 None:intergenic
TTTCTTATGGGGTGTATTTA+GGG 0.171151 5_3:-5960447 Msa0794140:CDS
AAGAGCTCAGATAAATTAAA+AGG 0.177741 5_3:-5963457 Msa0794140:CDS
GATAGTGGAACCAATTTCTT+AGG 0.183387 5_3:+5963496 None:intergenic
TATTAGTAAGAATGAAATTT+TGG 0.183691 5_3:-5959312 Msa0794140:CDS
ACTTCCACGTCACAAGTTTC+TGG 0.187423 5_3:-5963610 Msa0794140:CDS
CCAAATCTAAATCTTGCTTT+AGG 0.197364 5_3:-5958507 Msa0794140:CDS
AGAAATGATTTAGCACTTAA+AGG 0.211156 5_3:-5961253 Msa0794140:CDS
ATCTTCTTTCTGTTTCCTTT+TGG 0.220075 5_3:+5959256 None:intergenic
CTAGAGTCATCGATTATTTA+TGG 0.223688 5_3:-5965998 Msa0794140:five_prime_UTR
GGCAGGGTTTCCTCTGTTCC+TGG 0.232682 5_3:-5957939 Msa0794140:three_prime_UTR
ATTATTCAAATCCTCTAGTT+TGG 0.237439 5_3:-5962993 Msa0794140:CDS
GAAAACTTCTTCCCAGATTC+AGG 0.241089 5_3:+5964953 None:intergenic
TACAGGCTGCTTTACTTAAA+AGG 0.242890 5_3:-5962142 Msa0794140:CDS
TTAAAAGGCCTGAAATTTAC+AGG 0.257364 5_3:-5962127 Msa0794140:CDS
CAAATCTAAATCTTGCTTTA+GGG 0.259655 5_3:-5958506 Msa0794140:CDS
ACATCTCTTGGAAATGATAT+TGG 0.261827 5_3:-5958711 Msa0794140:CDS
GATTGAGATTCCTGCTTTCC+AGG 0.268338 5_3:+5964282 None:intergenic
TGTACCATCTGACATTTCTA+AGG 0.272539 5_3:+5960163 None:intergenic
CCTGCTTTGTCGGAATTAAT+TGG 0.282194 5_3:+5960287 None:intergenic
AGATGTCAAACTGTCATTAA+AGG 0.282987 5_3:+5958728 None:intergenic
CTTATTGACTCTTTGTTGTT+TGG 0.290780 5_3:+5958113 None:intergenic
TCACATACTTTATCATTATC+AGG 0.295514 5_3:+5964378 None:intergenic
AGAGTCTTAGTGATCGTTTA+AGG 0.301340 5_3:-5962340 Msa0794140:CDS
ATTTATGATCGTCACAGTTC+TGG 0.302812 5_3:-5958762 Msa0794140:CDS
GTGTAACTATAACCTGAATC+TGG 0.303910 5_3:-5964965 Msa0794140:five_prime_UTR
ATGCCTTGGAATGAGGTAAA+TGG 0.305822 5_3:-5958840 Msa0794140:CDS
TTCAAGTCCTGAATAGTTGC+AGG 0.307096 5_3:+5962926 None:intergenic
TGACTTGGAGGCACCTCTTC+AGG 0.308399 5_3:-5958952 Msa0794140:CDS
ACACATGCTGCAAGCAATAT+TGG 0.308546 5_3:-5959191 Msa0794140:CDS
CTGTAGAGCTTCATCATTAC+AGG 0.309959 5_3:+5962415 None:intergenic
CATCGATTATTTATGGTGTT+TGG 0.310334 5_3:-5965991 Msa0794140:five_prime_UTR
TGCCAGATGTATTCATATTC+AGG 0.314808 5_3:+5961759 None:intergenic
TTCATTCTTACTAATATTGC+AGG 0.317064 5_3:+5959319 None:intergenic
AGCAACAGGTGCACTCTCTT+TGG 0.319121 5_3:+5964494 None:intergenic
GTCTAAACCTTCTGAAGAAA+TGG 0.319345 5_3:-5959459 Msa0794140:CDS
TCCAAGCCGAAAGTCAAAAT+TGG 0.323158 5_3:-5963106 Msa0794140:CDS
GGGCGGAGGGTCGATCATTC+TGG 0.326361 5_3:-5960425 Msa0794140:CDS
TGAACAAACTTCTAAGAATA+TGG 0.327927 5_3:-5963047 Msa0794140:CDS
ATGATGAACTTCTTTATCAT+TGG 0.329841 5_3:+5958893 None:intergenic
TGAGAAATGCACTGCAAATA+AGG 0.330535 5_3:-5964463 Msa0794140:CDS
TGAACTCCAGTACATAATTC+TGG 0.330863 5_3:+5961594 None:intergenic
CAATATAAGCCGTAAAAGTT+TGG 0.332063 5_3:-5962690 Msa0794140:CDS
TATTGGTAAGGATAAAATTT+CGG 0.334937 5_3:-5959174 Msa0794140:CDS
GATAACATTTCAGAGAAAAT+AGG 0.336385 5_3:-5959029 Msa0794140:CDS
AGATTATCACTATATTGATT+TGG 0.337244 5_3:-5959237 Msa0794140:CDS
CCTAAAGCAAGATTTAGATT+TGG 0.339107 5_3:+5958507 None:intergenic
TTATCATCAGAAAACTCTTC+AGG 0.339111 5_3:+5964831 None:intergenic
TCTAGAAATTTAAAAGAATC+AGG 0.339263 5_3:-5962899 Msa0794140:CDS
TCACACAACCAATCCCCTTC+AGG 0.342376 5_3:+5963861 None:intergenic
TTATTCAAATCCTCTAGTTT+GGG 0.344273 5_3:-5962992 Msa0794140:CDS
CATAATTTCTGAATGTTACT+AGG 0.344702 5_3:-5957985 Msa0794140:three_prime_UTR
ACCTAAGCCTGCAACTATTC+AGG 0.344750 5_3:-5962933 Msa0794140:CDS
TTGGAGCCTCAGGGTAGTTC+AGG 0.347957 5_3:-5962671 Msa0794140:intron
ATCTCCTTCCATTGGCCTCC+GGG 0.351264 5_3:-5963371 Msa0794140:CDS
CTGTGTATCTCCTCCCAAAA+AGG 0.351427 5_3:+5958250 None:intergenic
TCAGGATCTGCTTGTGACTT+TGG 0.357368 5_3:+5964396 None:intergenic
TCGACAGCAAAACTGCATTC+AGG 0.357514 5_3:-5960139 Msa0794140:CDS
TCCTCCTCCTGCCGGCCCTA+AGG 0.357811 5_3:-5958460 Msa0794140:CDS
CTTCTTTATCATTGGGTAGC+TGG 0.363152 5_3:+5958901 None:intergenic
GAATTTGGCCATTCACTAGA+AGG 0.364576 5_3:-5962269 Msa0794140:CDS
CGGCTTGGAATTTAAGTTGT+TGG 0.366848 5_3:+5963120 None:intergenic
AGTGCACCTGTTGCTACTTC+TGG 0.367837 5_3:-5964486 Msa0794140:CDS
GATCTTGTTGAATAAGTATC+AGG 0.369539 5_3:-5964640 Msa0794140:CDS
CTATAGTTGGAGATTGATCT+AGG 0.370326 5_3:+5960240 None:intergenic
TGTCAACAGACGAAATTTAC+TGG 0.370493 5_3:-5960104 Msa0794140:CDS
TTTGATGCAGTGGGAACAAC+TGG 0.373218 5_3:+5962317 None:intergenic
ACCATTTCCATGTTTCCTCT+TGG 0.375638 5_3:+5959118 None:intergenic
GAGTAACAATCTGAGATAAC+AGG 0.376163 5_3:-5965969 Msa0794140:five_prime_UTR
TGTCATCATGACCTTCTAAA+TGG 0.377618 5_3:+5964610 None:intergenic
AATGACAGTTTGACATCTCT+TGG 0.377660 5_3:-5958723 Msa0794140:CDS
TTTCAGCTTCCACTGCATCT+TGG 0.381405 5_3:+5963832 None:intergenic
GGTATGCTGCCTTTCCTAGT+TGG 0.382499 5_3:-5958438 Msa0794140:CDS
TTCTTAGGGCTTGACACCTT+TGG 0.384360 5_3:+5963511 None:intergenic
GTATGCTGCCTTTCCTAGTT+GGG 0.384760 5_3:-5958437 Msa0794140:CDS
AAGAAGCCGAGGACAAGTTT+TGG 0.387620 5_3:-5958789 Msa0794140:CDS
TGGCTCCTCCAGCTGCAAAA+AGG 0.387755 5_3:-5963561 Msa0794140:CDS
TTGCTCTTTACTTCTTTGCC+AGG 0.394330 5_3:-5961431 Msa0794140:CDS
GCAGCAGCAACGTCATCTTC+TGG 0.401264 5_3:+5958381 None:intergenic
TAAATTGAAAGCTGCAATAC+AGG 0.404615 5_3:-5962159 Msa0794140:CDS
CCGTAAAAGTTTGGAGCCTC+AGG 0.405641 5_3:-5962681 Msa0794140:CDS
CCTCCTCCTGCCGGCCCTAA+GGG 0.406096 5_3:-5958459 Msa0794140:CDS
GGTGTCAAGCCCTAAGAAAT+TGG 0.407024 5_3:-5963506 Msa0794140:CDS
GGACTCGGACGGTGCCCATC+AGG 0.409250 5_3:+5958282 None:intergenic
GATCTCCTTCCATTGGCCTC+CGG 0.409429 5_3:-5963372 Msa0794140:CDS
ATCACGAGAGACAGCAAATC+AGG 0.415473 5_3:-5962378 Msa0794140:CDS
GTTGAAGAATTCTCCTCAAC+TGG 0.416630 5_3:+5960362 None:intergenic
CTGTAATGATGAAGCTCTAC+AGG 0.417070 5_3:-5962414 Msa0794140:CDS
AACTTCACGAGACCAAGTTT+TGG 0.417812 5_3:-5962039 Msa0794140:CDS
TTTGTCTCCAACTGAAGAAC+GGG 0.420058 5_3:+5958686 None:intergenic
AAGTGTATTGCCTGCTTTGT+CGG 0.420600 5_3:+5960277 None:intergenic
GATAAATTAAAAGGGAAGTC+TGG 0.425356 5_3:-5963448 Msa0794140:CDS
GTCTTTGAAGTGCATAGAAA+TGG 0.427275 5_3:-5961624 Msa0794140:CDS
GCTGGTAATCTGCAAGAATC+TGG 0.431195 5_3:-5962239 Msa0794140:CDS
AGTGGTATGAGGCTTGAATC+AGG 0.433624 5_3:-5964909 Msa0794140:exon
TGAAGAAACTCGTGAACAAC+AGG 0.433766 5_3:-5961985 Msa0794140:CDS
TCAAAAGAGGAGATGCATAA+AGG 0.433821 5_3:-5962185 Msa0794140:CDS
ACTGGCATTGCATTCAAACT+TGG 0.435635 5_3:+5960380 None:intergenic
TGATGAACTTCTTTATCATT+GGG 0.435764 5_3:+5958894 None:intergenic
CAGAAGGAATCGCCTGGCAG+AGG 0.441083 5_3:+5959366 None:intergenic
TGTAAGCTTCTGATCGCCCT+TGG 0.441662 5_3:+5962811 None:intergenic
GTCTGAGCGTTGTTTGTCGA+AGG 0.442210 5_3:-5960324 Msa0794140:CDS
CGACAGCAAAACTGCATTCA+GGG 0.443174 5_3:-5960138 Msa0794140:CDS
AATGAAGATTCTCGTGATAG+TGG 0.443705 5_3:+5963481 None:intergenic
AGAAACTCCCTGAAGGGGAT+TGG 0.445354 5_3:-5963869 Msa0794140:CDS
ATCCTCTTCTGCATCTCCTA+AGG 0.445478 5_3:-5961562 Msa0794140:CDS
AAGATAAGCAACGGCTTAAG+AGG 0.446947 5_3:-5959001 Msa0794140:CDS
AGGAAAGGCAGCATACCCTT+AGG 0.450953 5_3:+5958444 None:intergenic
TTGATATTCTGAGTATCAAC+AGG 0.451723 5_3:+5958594 None:intergenic
AAGTTTCACGCTTGAGTACA+TGG 0.452373 5_3:-5961494 Msa0794140:CDS
TTTAAAAGAATCAGGTTCGT+TGG 0.452441 5_3:-5962891 Msa0794140:CDS
CATCTTCTGGCCTATTTGCA+TGG 0.457160 5_3:+5958394 None:intergenic
TTGTTGTCATAATATAGTTA+CGG 0.457260 5_3:-5958038 Msa0794140:three_prime_UTR
AACTGCTGAAGGCTTAATAA+CGG 0.458369 5_3:+5962775 None:intergenic
TTCTGTTGTTTCCACACCCA+AGG 0.458479 5_3:-5962828 Msa0794140:CDS
TCACTAGAAGGTTGCACAGC+TGG 0.460949 5_3:-5962257 Msa0794140:CDS
TAGCTCAGCCTCCTAGCATC+TGG 0.461314 5_3:+5966018 None:intergenic
ATCATGACCTTCTAAATGGT+TGG 0.462151 5_3:+5964614 None:intergenic
CGATCAGAAGCTTACACCTC+GGG 0.463960 5_3:-5962804 Msa0794140:CDS
CTTTCTCATGATGTCCATCA+TGG 0.465823 5_3:+5964325 None:intergenic
TCATGACCTTCTAAATGGTT+GGG 0.468835 5_3:+5964615 None:intergenic
CCTTCTGAAGAAATGGGAAC+AGG 0.469414 5_3:-5959452 Msa0794140:CDS
TCTAGACAAGTCTCTCACTA+AGG 0.470612 5_3:+5961827 None:intergenic
ATTATCTTGTTCGACAAAGC+CGG 0.470915 5_3:-5958185 Msa0794140:three_prime_UTR
GCAATCGGTGCTGAATACTA+TGG 0.471019 5_3:-5958565 Msa0794140:CDS
GGTTCCTTTGCATGGACCGC+TGG 0.471613 5_3:+5958141 None:intergenic
GTTTGTTCCATGTTTGAAGA+TGG 0.473390 5_3:+5958333 None:intergenic
GGGCCGGCAGGAGGAGGAGA+AGG 0.474239 5_3:+5958465 None:intergenic
GGAAACTTCGGGACTAAACT+TGG 0.475160 5_3:+5961524 None:intergenic
TTCCTGAATATGAATACATC+TGG 0.475367 5_3:-5961761 Msa0794140:CDS
CATGTTGATCTATCAGTGGC+TGG 0.475476 5_3:-5958873 Msa0794140:CDS
AGCATACCCTTAGGGCCGGC+AGG 0.476396 5_3:+5958453 None:intergenic
CTGAGTATCAACAGGAAAGA+AGG 0.480771 5_3:+5958602 None:intergenic
GTTGTGAACACAACTGTGTC+TGG 0.482171 5_3:+5960192 None:intergenic
CTTCTGATCGCCCTTGGGTG+TGG 0.483509 5_3:+5962817 None:intergenic
GGTTAAATCACCTGGAAAGC+AGG 0.483548 5_3:-5964292 Msa0794140:CDS
ACGCGCTTAACTTCCCATCC+TGG 0.483870 5_3:+5962729 None:intergenic
TTCTCACCAGAAGTAGCAAC+AGG 0.484038 5_3:+5964480 None:intergenic
CTGTGCAACCTTCTAGTGAA+TGG 0.484093 5_3:+5962261 None:intergenic
ACGATCACTAAGACTCTCTC+TGG 0.485193 5_3:+5962346 None:intergenic
TTGATTCAATTGCACTTGAT+CGG 0.485788 5_3:+5962969 None:intergenic
CCCTTAGGGCCGGCAGGAGG+AGG 0.486442 5_3:+5958459 None:intergenic
TTGAAGATTCAAAATCGAAA+GGG 0.486742 5_3:+5966716 None:intergenic
AGTTGAAGACTGTAAATGTT+CGG 0.486912 5_3:-5964349 Msa0794140:CDS
AACTTCGTTGAGGGAAACTT+CGG 0.487338 5_3:+5961512 None:intergenic
TCTAAACCTTCTGAAGAAAT+GGG 0.488520 5_3:-5959458 Msa0794140:CDS
TCTGATGATAACTGTCGCTC+AGG 0.488559 5_3:-5964819 Msa0794140:CDS
TCCAAGAGGAAACATGGAAA+TGG 0.489175 5_3:-5959119 Msa0794140:CDS
ACAGAAAATGCCTTGGAATG+AGG 0.489337 5_3:-5958847 Msa0794140:CDS
ACTTCGTTGAGGGAAACTTC+GGG 0.490377 5_3:+5961513 None:intergenic
CCGGCAGGAGGAGGAGAAGG+AGG 0.490631 5_3:+5958468 None:intergenic
AAGATGGAAACGATAGAGAA+AGG 0.490891 5_3:+5958349 None:intergenic
CAGGAAGACCTGTCCGCTGA+AGG 0.492990 5_3:-5958933 Msa0794140:CDS
TGGACGATGGTTCCTTTGCA+TGG 0.493053 5_3:+5958133 None:intergenic
GAGACACTACAAAGGTCTAC+TGG 0.493253 5_3:-5961287 Msa0794140:CDS
TTATCACTATATTGATTTGG+AGG 0.493595 5_3:-5959234 Msa0794140:CDS
AATAAGGATAAATTTATTGA+AGG 0.493663 5_3:-5964447 Msa0794140:CDS
GTATTGTTACTCACTATAGT+TGG 0.494039 5_3:+5960227 None:intergenic
GAATATCAATGGCTCGCAAT+CGG 0.494085 5_3:-5958580 Msa0794140:CDS
TCCTGAATAGTTGCAGGCTT+AGG 0.495025 5_3:+5962932 None:intergenic
CTAGGAAAGTCGGATTTAGT+TGG 0.495781 5_3:-5961867 Msa0794140:CDS
AAGATCAGCAAAGGACCAAA+AGG 0.495832 5_3:-5959271 Msa0794140:CDS
CCTGTTCCCATTTCTTCAGA+AGG 0.496781 5_3:+5959452 None:intergenic
CCTCCTTCTCCTCCTCCTGC+CGG 0.497884 5_3:-5958468 Msa0794140:CDS
ATTGGTTCCCGTTCTTCAGT+TGG 0.498776 5_3:-5958693 Msa0794140:CDS
TTTGTTGTTCAGACATTGAA+GGG 0.499024 5_3:-5963651 Msa0794140:intron
TGCTCTTTACTTCTTTGCCA+GGG 0.502019 5_3:-5961430 Msa0794140:CDS
GAAATTTACTGGTTCTTCCC+TGG 0.502658 5_3:-5960093 Msa0794140:intron
TGCCTCAAGTATCTCAAAAG+AGG 0.502921 5_3:-5962198 Msa0794140:CDS
AGAGCTCAGATAAATTAAAA+GGG 0.503243 5_3:-5963456 Msa0794140:CDS
AATATCTGTCTAGGAATGAC+AGG 0.504592 5_3:-5962862 Msa0794140:CDS
TATCATCAGAAAACTCTTCA+GGG 0.505259 5_3:+5964832 None:intergenic
TGCATCTCCTAAGGTTCTTG+AGG 0.505751 5_3:-5961553 Msa0794140:CDS
TGCTGGAATCAATATAACTA+AGG 0.506058 5_3:-5959051 Msa0794140:CDS
AAATCTAAATCTTGCTTTAG+GGG 0.507133 5_3:-5958505 Msa0794140:CDS
TGTTCAGAATTCTATGAATG+AGG 0.507242 5_3:-5964787 Msa0794140:CDS
TGATCTAGGGAAGTTGAAGA+AGG 0.507959 5_3:+5960254 None:intergenic
CTTCTCTAGCACCACCATGA+TGG 0.509019 5_3:+5961460 None:intergenic
AAGTGTTGTTTCGAAGATGC+TGG 0.509766 5_3:-5961787 Msa0794140:CDS
GTAAGCTTCTGATCGCCCTT+GGG 0.510097 5_3:+5962812 None:intergenic
GTCACTACCTCAAGAACCTT+AGG 0.511626 5_3:+5961546 None:intergenic
GGAGCCACTTCAATGTTGTC+AGG 0.511817 5_3:+5963577 None:intergenic
TACTTGCCTTTCAACATCCC+TGG 0.511888 5_3:+5961413 None:intergenic
CTGAATACTATGGCAATGAA+AGG 0.512247 5_3:-5958555 Msa0794140:CDS
CAGGATCCCAACCATTTAGA+AGG 0.513006 5_3:-5964621 Msa0794140:CDS
GTTGATACTCAGAATATCAA+TGG 0.513671 5_3:-5958591 Msa0794140:CDS
CAAAGGTCCAAGAGGAAACA+TGG 0.514766 5_3:-5959125 Msa0794140:CDS
ACTGATCTTTGTTCACAACT+AGG 0.514884 5_3:-5961885 Msa0794140:CDS
TTGTCACTATATTGACTTGG+AGG 0.515807 5_3:-5958964 Msa0794140:CDS
GGAAGCTGAAAAGAAGAGGC+TGG 0.516226 5_3:-5963820 Msa0794140:CDS
CACACAACCAATCCCCTTCA+GGG 0.516274 5_3:+5963862 None:intergenic
AGGTTCTTTCCATCGTTCCC+AGG 0.516927 5_3:+5958622 None:intergenic
CAAGCGTGAAACTTCGTTGA+GGG 0.518472 5_3:+5961503 None:intergenic
TTCTTATGGGGTGTATTTAG+GGG 0.519185 5_3:-5960446 Msa0794140:CDS
CTAGACAAGTCTCTCACTAA+GGG 0.520129 5_3:+5961828 None:intergenic
ACCGATGAGATTCCTACATC+AGG 0.520136 5_3:-5962083 Msa0794140:CDS
AGATGGAAACGATAGAGAAA+GGG 0.522282 5_3:+5958350 None:intergenic
TGCGACATCTGTGGAGATGC+TGG 0.522617 5_3:-5964066 Msa0794140:CDS
ATAGTGGAACCAATTTCTTA+GGG 0.525138 5_3:+5963497 None:intergenic
CTGGTTTACAGAAAATGCCT+TGG 0.525647 5_3:-5958854 Msa0794140:CDS
GTTAAGTTGCTTCAAATCGC+TGG 0.526228 5_3:+5961917 None:intergenic
TGCTTGAGAAACTCCCTGAA+GGG 0.527092 5_3:-5963875 Msa0794140:CDS
AGGAAGACCTGTCCGCTGAA+GGG 0.527896 5_3:-5958932 Msa0794140:CDS
TGTAACTATAACCTGAATCT+GGG 0.529033 5_3:-5964964 Msa0794140:five_prime_UTR
TCTGAGCGTTGTTTGTCGAA+GGG 0.531153 5_3:-5960323 Msa0794140:CDS
TTTCCATTTACCTCATTCCA+AGG 0.531933 5_3:+5958837 None:intergenic
TGGACCGAAAATATCTGTCT+AGG 0.532660 5_3:-5962871 Msa0794140:CDS
CCAATTAATTCCGACAAAGC+AGG 0.534149 5_3:-5960287 Msa0794140:CDS
GAAATCTATCTAACCCCAGC+TGG 0.534731 5_3:+5967007 None:intergenic
CTGATGATAACTGTCGCTCA+GGG 0.535058 5_3:-5964818 Msa0794140:CDS
GGAAAGGCAGCATACCCTTA+GGG 0.536744 5_3:+5958445 None:intergenic
GAAAATCAAGAAACAGATGC+TGG 0.536807 5_3:-5959068 Msa0794140:CDS
ATTGAAGATTCAAAATCGAA+AGG 0.538109 5_3:+5966715 None:intergenic
AGGCAGCATACCCTTAGGGC+CGG 0.538192 5_3:+5958449 None:intergenic
CAACTATTCAGGACTTGAAA+GGG 0.540645 5_3:-5962922 Msa0794140:CDS
TGCTGCAAGCAATATTGGTA+AGG 0.541846 5_3:-5959186 Msa0794140:CDS
CAATTCAGAACAGTGGTATG+AGG 0.542105 5_3:-5964920 Msa0794140:exon
TTGTTCACAACTAGGAAAGT+CGG 0.542770 5_3:-5961877 Msa0794140:CDS
TAGCAGTTTAAAAGCCAGCT+GGG 0.545019 5_3:-5967021 None:intergenic
GTTCAGAATTCTATGAATGA+GGG 0.545169 5_3:-5964786 Msa0794140:CDS
AGATAATTTACACGACAGAC+AGG 0.545278 5_3:+5958201 None:intergenic
AAGCCTCCAGAATTATGTAC+TGG 0.545372 5_3:-5961600 Msa0794140:CDS
ATCTCGCCAAAACTTGTCCT+CGG 0.545464 5_3:+5958783 None:intergenic
TCTCGATTATTAACTGCTGA+AGG 0.546170 5_3:+5962764 None:intergenic
GCAACTATTCAGGACTTGAA+AGG 0.547193 5_3:-5962923 Msa0794140:CDS
CCTTTGCATGGACCGCTGGA+AGG 0.547284 5_3:+5958145 None:intergenic
TGGTCACTATATCGACTTGG+AGG 0.548207 5_3:-5959099 Msa0794140:CDS
ATAGCAGTTTAAAAGCCAGC+TGG 0.550311 5_3:-5967022 None:intergenic
GGAAGACCTGTCCGCTGAAG+GGG 0.552331 5_3:-5958931 Msa0794140:CDS
AGAAGGAATCGCCTGGCAGA+GGG 0.553159 5_3:+5959367 None:intergenic
ATCGTTTCCATCTTCAAACA+TGG 0.553642 5_3:-5958340 Msa0794140:CDS
GCAAGAGAATACCCTCTGCC+AGG 0.554070 5_3:-5959378 Msa0794140:CDS
AACCTTAGGAGATGCAGAAG+AGG 0.554128 5_3:+5961560 None:intergenic
GCAGAAAGCTAGTGTAGTAG+AGG 0.554509 5_3:-5959498 Msa0794140:intron
ACTGCTCGATCTCCTTCCAT+TGG 0.555290 5_3:-5963379 Msa0794140:CDS
ACTCAACCCCTTCAGCGGAC+AGG 0.555338 5_3:+5958925 None:intergenic
TCATGAGAAAGCTGAAGAGC+TGG 0.555793 5_3:-5964313 Msa0794140:CDS
TTCAACTCCGTGCCTGATGT+AGG 0.560261 5_3:+5962071 None:intergenic
TGTAAATGTTCGGCCCATGA+TGG 0.560496 5_3:-5964339 Msa0794140:CDS
TCTTTGCCAGGGATGTTGAA+AGG 0.563014 5_3:-5961419 Msa0794140:intron
TGCTAACAGAAGGAATCGCC+TGG 0.563591 5_3:+5959360 None:intergenic
CCATCGTTCCCAGGTCCTCA+CGG 0.563925 5_3:+5958631 None:intergenic
TCTGCTGGCCCAACTAGGAA+AGG 0.564230 5_3:+5958429 None:intergenic
CAGAAAACTCTTCAGGGGCA+TGG 0.566317 5_3:+5964838 None:intergenic
TCTGTTGTTTCCACACCCAA+GGG 0.567808 5_3:-5962827 Msa0794140:CDS
AGTTGTGAACAAAGATCAGT+TGG 0.567980 5_3:+5961888 None:intergenic
ATATGCTGTAGGTGCACTGA+TGG 0.568948 5_3:-5964024 Msa0794140:CDS
TGAATACTATGGCAATGAAA+GGG 0.569844 5_3:-5958554 Msa0794140:CDS
TTTGAATGCAATGCCAGTTG+AGG 0.570512 5_3:-5960375 Msa0794140:CDS
AAAAGGAGAAATGAAGGACT+CGG 0.570546 5_3:+5958267 None:intergenic
ATGCCTCCTCGTAACCACTC+TGG 0.575932 5_3:-5963418 Msa0794140:CDS
GCGGACAGGTCTTCCTGAAG+AGG 0.576508 5_3:+5958939 None:intergenic
TGGCCATCACAGTTCCATCA+TGG 0.576596 5_3:-5961474 Msa0794140:CDS
AATCAGATGTAGAATTCTCA+AGG 0.576829 5_3:+5961958 None:intergenic
GAAGAGCTGGTTAAATCACC+TGG 0.581750 5_3:-5964300 Msa0794140:CDS
ATGCTTGAGAAACTCCCTGA+AGG 0.582041 5_3:-5963876 Msa0794140:CDS
CACCTGCTCGTATGACAAGC+AGG 0.582436 5_3:-5963021 Msa0794140:CDS
GCCTGATGTAGGAATCTCAT+CGG 0.583336 5_3:+5962082 None:intergenic
TGAATGTTACTAGGAACTTG+CGG 0.583969 5_3:-5957976 Msa0794140:three_prime_UTR
CTATCTTGATTGCTAACAGA+AGG 0.585863 5_3:+5959350 None:intergenic
AAAATCATCCGTGAGGACCT+GGG 0.586493 5_3:-5958639 Msa0794140:CDS
ACAAACAAAAGCTTCTTCAA+AGG 0.587073 5_3:-5958316 Msa0794140:CDS
CCGTGAGGACCTGGGAACGA+TGG 0.587582 5_3:-5958631 Msa0794140:CDS
GTGGTATGAGGCTTGAATCA+GGG 0.587604 5_3:-5964908 Msa0794140:exon
TTTCTCATGATGTCCATCAT+GGG 0.588698 5_3:+5964326 None:intergenic
GTGTGTTAGAAACCAAAACT+TGG 0.591220 5_3:+5962027 None:intergenic
AGATTGTCACTATATTGACT+TGG 0.591514 5_3:-5958967 Msa0794140:CDS
TATAGTTGGAGATTGATCTA+GGG 0.594018 5_3:+5960241 None:intergenic
GACCTGCTTGTCATACGAGC+AGG 0.599922 5_3:+5963019 None:intergenic
GTACCATCTGACATTTCTAA+GGG 0.600277 5_3:+5960164 None:intergenic
TTTCTGGAAGCTGATTGGAT+GGG 0.600278 5_3:+5961200 None:intergenic
AAATGGTCACTATATCGACT+TGG 0.602000 5_3:-5959102 Msa0794140:CDS
CAAGCTCTTGAATTAAGCAA+AGG 0.603206 5_3:-5963538 Msa0794140:CDS
ACTTGATCGGCCCAAACTAG+AGG 0.604740 5_3:+5962982 None:intergenic
TCGAGAGTCGAAGATAAACC+AGG 0.605164 5_3:-5962747 Msa0794140:CDS
GAGTCGAAGATAAACCAGGA+TGG 0.606127 5_3:-5962743 Msa0794140:CDS
ATCTACTTGCTATATGCTGT+AGG 0.609329 5_3:-5964035 Msa0794140:CDS
CCTTCCAGCGGTCCATGCAA+AGG 0.609353 5_3:-5958145 Msa0794140:three_prime_UTR
AAAGTTCCAGAAAGAAGCCG+AGG 0.609380 5_3:-5958800 Msa0794140:CDS
ACGTCCTGACAACATTGAAG+TGG 0.609393 5_3:-5963581 Msa0794140:CDS
TATGATCGTCACAGTTCTGG+AGG 0.610248 5_3:-5958759 Msa0794140:CDS
GAAGCTGAAAAGAAGAGGCT+GGG 0.610370 5_3:-5963819 Msa0794140:intron
ACTCTTTGTTGTTTGGACGA+TGG 0.612983 5_3:+5958120 None:intergenic
GCTTGAGAAACTCCCTGAAG+GGG 0.613634 5_3:-5963874 Msa0794140:CDS
AGTCGAAGATAAACCAGGAT+GGG 0.614108 5_3:-5962742 Msa0794140:CDS
CAGTGGAAGCTGAAAAGAAG+AGG 0.615428 5_3:-5963824 Msa0794140:CDS
GATGTATTCATATTCAGGAA+AGG 0.618210 5_3:+5961764 None:intergenic
TGACCCCGGAGGCCAATGGA+AGG 0.619978 5_3:+5963367 None:intergenic
GAGTGATGAATCAGATGTTG+TGG 0.620751 5_3:-5964250 Msa0794140:CDS
CTAGTGTAGTAGAGGATGAA+CGG 0.621181 5_3:-5959490 Msa0794140:CDS
ACATGATATCAGGATCAAGA+AGG 0.621588 5_3:-5966048 Msa0794140:intron
TCTCCTTCCATTGGCCTCCG+GGG 0.622459 5_3:-5963370 Msa0794140:CDS
ATACCCTTAGGGCCGGCAGG+AGG 0.623451 5_3:+5958456 None:intergenic
TGAAGAATGCCAAGATGCAG+TGG 0.624373 5_3:-5963841 Msa0794140:CDS
AATTTGACCCCGGAGGCCAA+TGG 0.624584 5_3:+5963363 None:intergenic
TAGGTGATCAAGATAAGCAA+CGG 0.624619 5_3:-5959010 Msa0794140:CDS
TTTGCTGTCTCTCGTGATCG+AGG 0.625997 5_3:+5962383 None:intergenic
TGATAACTGTCGCTCAGGGG+AGG 0.626016 5_3:-5964814 Msa0794140:CDS
GTAACATTCAGAAATTATGA+CGG 0.626722 5_3:+5957989 None:intergenic
CGTAAAAGTTTGGAGCCTCA+GGG 0.626806 5_3:-5962680 Msa0794140:CDS
CTGGTACTCAACCCCTTCAG+CGG 0.629445 5_3:+5958920 None:intergenic
GGTTATCTATCATACACGAC+CGG 0.633551 5_3:+5958166 None:intergenic
CCTCCTCGTAACCACTCTGG+TGG 0.634031 5_3:-5963415 Msa0794140:CDS
GCGATCAGAAGCTTACACCT+CGG 0.636883 5_3:-5962805 Msa0794140:CDS
TGAGATTCCTACATCAGGCA+CGG 0.639985 5_3:-5962078 Msa0794140:CDS
ACATGCATGCAAGATGAACA+AGG 0.642266 5_3:+5964864 None:intergenic
GTGAAGGTATGCGACATCTG+TGG 0.642791 5_3:-5964075 Msa0794140:CDS
CTGTGGAGATGCTGGTCGTG+AGG 0.646609 5_3:-5964058 Msa0794140:CDS
TTAATAACGGTTTCTCCCCG+AGG 0.648070 5_3:+5962788 None:intergenic
AGACTTGTCTAGAAAAGCTG+TGG 0.652671 5_3:-5961817 Msa0794140:CDS
TCACCACCAGAGTGGTTACG+AGG 0.653869 5_3:+5963412 None:intergenic
TTTGCCAGAAACTTGTGACG+TGG 0.655180 5_3:+5963606 None:intergenic
AGTAACAATCTGAGATAACA+GGG 0.655508 5_3:-5965968 Msa0794140:intron
CCACCATGATGGAACTGTGA+TGG 0.656624 5_3:+5961471 None:intergenic
GAAACAACAGAACTAGCCAC+AGG 0.656882 5_3:+5962839 None:intergenic
TCTTATGGGGTGTATTTAGG+GGG 0.658201 5_3:-5960445 Msa0794140:CDS
AGGTGTGAGTAACAAGATGG+TGG 0.661574 5_3:-5959432 Msa0794140:CDS
TCATCATGTTGATCTATCAG+TGG 0.666749 5_3:-5958877 Msa0794140:CDS
ATCATCAGAAAACTCTTCAG+GGG 0.668516 5_3:+5964833 None:intergenic
GCTTGTGAAAACTTGCAGCA+CGG 0.671925 5_3:-5964738 Msa0794140:CDS
ATTAAGCAAAGGATCACCAA+AGG 0.672444 5_3:-5963527 Msa0794140:CDS
AAGATCAGCAAAGGTCCAAG+AGG 0.675794 5_3:-5959133 Msa0794140:CDS
AAATTGATGAAGATCAGCAA+AGG 0.676451 5_3:-5959142 Msa0794140:CDS
TCAAGCGTGAAACTTCGTTG+AGG 0.678162 5_3:+5961502 None:intergenic
GGAGAAATGAAGGACTCGGA+CGG 0.678904 5_3:+5958271 None:intergenic
GTCTAGGAATGACAGGCCTG+TGG 0.679216 5_3:-5962855 Msa0794140:CDS
ACTCCAGTACATAATTCTGG+AGG 0.681978 5_3:+5961597 None:intergenic
ACTGTGATGAAGATCAGCAA+AGG 0.682443 5_3:-5959280 Msa0794140:CDS
CGATTCTCTATCTGAAAACG+CGG 0.684255 5_3:-5964673 Msa0794140:CDS
AACAGGTGTGAGTAACAAGA+TGG 0.684281 5_3:-5959435 Msa0794140:CDS
AGCAGTTTAAAAGCCAGCTG+GGG 0.685087 5_3:-5967020 None:intergenic
GTACCCTTAGAAATGTCAGA+TGG 0.691876 5_3:-5960167 Msa0794140:CDS
CCATCACAGTTCCATCATGG+TGG 0.693360 5_3:-5961471 Msa0794140:CDS
TGATGATAACTGTCGCTCAG+GGG 0.698187 5_3:-5964817 Msa0794140:CDS
TTTCCACCAAGACCAAAAGG+GGG 0.699350 5_3:-5963073 Msa0794140:CDS
GTGTGTCATCACCACCAGAG+TGG 0.700723 5_3:+5963404 None:intergenic
CCACCAGAGTGGTTACGAGG+AGG 0.714371 5_3:+5963415 None:intergenic
TATGATAGATAACCTTCCAG+CGG 0.717954 5_3:-5958157 Msa0794140:three_prime_UTR
CATTGCGCAATTCAGAACAG+TGG 0.721184 5_3:-5964927 Msa0794140:five_prime_UTR
AGCTATGAGAGACACTACAA+AGG 0.728122 5_3:-5961295 Msa0794140:CDS
GATCAGAAGCTTACACCTCG+GGG 0.728452 5_3:-5962803 Msa0794140:CDS
AACACACCTGAACTACCCTG+AGG 0.764247 5_3:+5962665 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATTTTTTTTTAATTACTAT+CGG + chr5_3:5958729-5958748 None:intergenic 10.0%
!!! TAGATTTATCTTATTATTTT+TGG + chr5_3:5959811-5959830 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr5_3:5965275-5965294 Msa0794140:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr5_3:5965275-5965294 Msa0794140:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr5_3:5965275-5965294 Msa0794140:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr5_3:5965275-5965294 Msa0794140:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr5_3:5965275-5965294 Msa0794140:intron 100.0%
!!! ATTTTTTTAATCGATTTGTT+TGG - chr5_3:5958411-5958430 Msa0794140:CDS 15.0%
!!! TAAAATTATATTTTTGCCTA+TGG - chr5_3:5959365-5959384 Msa0794140:CDS 15.0%
!! ATAAAATTAGGTTATTGTTT+AGG + chr5_3:5959590-5959609 None:intergenic 15.0%
!! AACTATTGCTTTATAAAATT+AGG + chr5_3:5959602-5959621 None:intergenic 15.0%
!! AATAAGGATAAATTTATTGA+AGG - chr5_3:5960502-5960521 Msa0794140:intron 15.0%
!! TATGAATATCATTCTTATAT+TGG - chr5_3:5963559-5963578 Msa0794140:CDS 15.0%
!!! TATTAGTAAGAATGAAATTT+TGG - chr5_3:5965637-5965656 Msa0794140:intron 15.0%
!! TCAAAAGAATTATGCAAATA+AGG + chr5_3:5958832-5958851 None:intergenic 20.0%
!!! TATTTGCATAATTCTTTTGA+TGG - chr5_3:5958832-5958851 Msa0794140:CDS 20.0%
!! ACAACAAAGTAAAAAAAAAG+TGG + chr5_3:5959029-5959048 None:intergenic 20.0%
!!! TTACGTATATATATTGGTTT+TGG - chr5_3:5959275-5959294 Msa0794140:CDS 20.0%
!!! ATTCATTAGTAGAAAAGTAT+AGG - chr5_3:5959419-5959438 Msa0794140:CDS 20.0%
!! GTTATTATTTGTATATGTGA+TGG - chr5_3:5959862-5959881 Msa0794140:intron 20.0%
!! ATTCAGTACTAAAAATATGT+CGG + chr5_3:5961277-5961296 None:intergenic 20.0%
!!! AATTTTTTGTTCTCATGAAT+AGG - chr5_3:5961758-5961777 Msa0794140:intron 20.0%
!! TCTAGAAATTTAAAAGAATC+AGG - chr5_3:5962050-5962069 Msa0794140:CDS 20.0%
!! AAGATATCGAAAAGTTAAAA+AGG + chr5_3:5962347-5962366 None:intergenic 20.0%
!! AAAAAAACCCAATAATTTGA+CGG - chr5_3:5964242-5964261 Msa0794140:CDS 20.0%
!!! TTTGTCTTTTTTCTTTTTTG+CGG - chr5_3:5964308-5964327 Msa0794140:CDS 20.0%
!!! TTATTTTCTTGTTGAAAAAG+TGG + chr5_3:5964414-5964433 None:intergenic 20.0%
!!! TTAGATTTTACATGCATTTA+AGG + chr5_3:5964893-5964912 None:intergenic 20.0%
!!! AATTATTGGTCTCTAAATTA+TGG - chr5_3:5965163-5965182 Msa0794140:intron 20.0%
!!! ATTATTGGTCTCTAAATTAT+GGG - chr5_3:5965164-5965183 Msa0794140:intron 20.0%
!!! AGATTATCACTATATTGATT+TGG - chr5_3:5965712-5965731 Msa0794140:intron 20.0%
!! TATTGGTAAGGATAAAATTT+CGG - chr5_3:5965775-5965794 Msa0794140:intron 20.0%
!! TTGTTGTCATAATATAGTTA+CGG - chr5_3:5966911-5966930 Msa0794140:five_prime_UTR 20.0%
! TTGAAGATTCAAAATCGAAA+GGG + chr5_3:5958236-5958255 None:intergenic 25.0%
! ATTGAAGATTCAAAATCGAA+AGG + chr5_3:5958237-5958256 None:intergenic 25.0%
!! GATTTTGAATCTTCAATTTC+TGG - chr5_3:5958240-5958259 Msa0794140:exon 25.0%
!!! ATCAACAAAAGTATCTAACA+CGG + chr5_3:5958344-5958363 None:intergenic 25.0%
!!! TTTGTTGATTTTTCACAGTT+AGG - chr5_3:5958355-5958374 Msa0794140:CDS 25.0%
!!! TTGTTGATTTTTCACAGTTA+GGG - chr5_3:5958356-5958375 Msa0794140:CDS 25.0%
! TGTAATTGTGATGAATACAT+TGG - chr5_3:5958463-5958482 Msa0794140:CDS 25.0%
! TATCAAAAGGAACATGAAAA+AGG + chr5_3:5958494-5958513 None:intergenic 25.0%
! CAATAGCAATTAAACACAAA+TGG + chr5_3:5958551-5958570 None:intergenic 25.0%
! CATAATTGAATTTAATCACG+TGG - chr5_3:5958750-5958769 Msa0794140:CDS 25.0%
!!! TTTACTTTGTTGTTGTTATG+AGG - chr5_3:5959036-5959055 Msa0794140:CDS 25.0%
! ACAATAACATGAATCAAATG+CGG + chr5_3:5959076-5959095 None:intergenic 25.0%
! GGTGTATTACGTATATATAT+TGG - chr5_3:5959269-5959288 Msa0794140:CDS 25.0%
! AATAATATATAAAGCGAGAG+TGG + chr5_3:5959630-5959649 None:intergenic 25.0%
!! TTCTAATGCACTCATATTTT+TGG - chr5_3:5959663-5959682 Msa0794140:intron 25.0%
!! TCTAATGCACTCATATTTTT+GGG - chr5_3:5959664-5959683 Msa0794140:intron 25.0%
!! CATATTTTTCCAATAAAGTG+TGG + chr5_3:5959759-5959778 None:intergenic 25.0%
! ATTTATCACTTTCACAAAAG+CGG + chr5_3:5959838-5959857 None:intergenic 25.0%
!! GATTCTAAAGAATTACTGAA+AGG - chr5_3:5959910-5959929 Msa0794140:intron 25.0%
!! TAATAAAAAAAAGCACGAGT+TGG + chr5_3:5959963-5959982 None:intergenic 25.0%
!!! AACTCGTGCTTTTTTTTATT+AGG - chr5_3:5959962-5959981 Msa0794140:intron 25.0%
!!! GAGCATTTTGAATTTTTTTC+TGG + chr5_3:5960409-5960428 None:intergenic 25.0%
! TCACATACTTTATCATTATC+AGG + chr5_3:5960574-5960593 None:intergenic 25.0%
! AAACTTGATTGAGATGAAAA+TGG - chr5_3:5960774-5960793 Msa0794140:intron 25.0%
! CTGATTCAAAGAAACAATAA+TGG + chr5_3:5961037-5961056 None:intergenic 25.0%
! TTTGACATAAAAATGTGTTC+TGG - chr5_3:5961169-5961188 Msa0794140:intron 25.0%
! TTGACATAAAAATGTGTTCT+GGG - chr5_3:5961170-5961189 Msa0794140:intron 25.0%
! AAGAGCTCAGATAAATTAAA+AGG - chr5_3:5961492-5961511 Msa0794140:CDS 25.0%
! AGAGCTCAGATAAATTAAAA+GGG - chr5_3:5961493-5961512 Msa0794140:CDS 25.0%
!! TGAACAAACTTCTAAGAATA+TGG - chr5_3:5961902-5961921 Msa0794140:CDS 25.0%
! ATTATTCAAATCCTCTAGTT+TGG - chr5_3:5961956-5961975 Msa0794140:CDS 25.0%
!! TTATTCAAATCCTCTAGTTT+GGG - chr5_3:5961957-5961976 Msa0794140:CDS 25.0%
! AGAAATGATTTAGCACTTAA+AGG - chr5_3:5963696-5963715 Msa0794140:intron 25.0%
!!! GTTCATTTACAATTTTGATC+AGG - chr5_3:5963911-5963930 Msa0794140:intron 25.0%
!!! ACAATTTTGATCAGGAAATA+TGG - chr5_3:5963919-5963938 Msa0794140:intron 25.0%
! TTCTGTGTTAGTAAATTTCT+TGG - chr5_3:5963974-5963993 Msa0794140:intron 25.0%
! TCTGTGTTAGTAAATTTCTT+GGG - chr5_3:5963975-5963994 Msa0794140:intron 25.0%
! ATCCTGAATCAATATCATTA+GGG + chr5_3:5964107-5964126 None:intergenic 25.0%
! AATCCTGAATCAATATCATT+AGG + chr5_3:5964108-5964127 None:intergenic 25.0%
! ATAATGTTCTGTGTTGAATT+TGG - chr5_3:5964210-5964229 Msa0794140:intron 25.0%
!!! TTGTCTTTTTTCTTTTTTGC+GGG - chr5_3:5964309-5964328 Msa0794140:CDS 25.0%
!!! GAATATGTTGCTTTTCTTAT+GGG - chr5_3:5964490-5964509 Msa0794140:CDS 25.0%
!!! AATATGTTGCTTTTCTTATG+GGG - chr5_3:5964491-5964510 Msa0794140:CDS 25.0%
! TTAAGGATAAAATCATACCA+GGG + chr5_3:5964876-5964895 None:intergenic 25.0%
! TTTAAGGATAAAATCATACC+AGG + chr5_3:5964877-5964896 None:intergenic 25.0%
!!! ATCATTTTTAACTGTAGTTG+AGG + chr5_3:5964993-5965012 None:intergenic 25.0%
! CAATATCAACAATCTATCTA+GGG + chr5_3:5965025-5965044 None:intergenic 25.0%
! TCAATATCAACAATCTATCT+AGG + chr5_3:5965026-5965045 None:intergenic 25.0%
!!! AGCAGTAAAAGTTTTATTTC+TGG + chr5_3:5965079-5965098 None:intergenic 25.0%
!!! ACTTTTACTGCTTAGTTTTA+TGG - chr5_3:5965087-5965106 Msa0794140:intron 25.0%
!! TTATTGGTCTCTAAATTATG+GGG - chr5_3:5965165-5965184 Msa0794140:intron 25.0%
! AAATTATGGGGAAAATAAAC+AGG - chr5_3:5965177-5965196 Msa0794140:intron 25.0%
! AATTATGGGGAAAATAAACA+GGG - chr5_3:5965178-5965197 Msa0794140:intron 25.0%
!!! AAACCAGTTTTATAAAGAGT+AGG - chr5_3:5965373-5965392 Msa0794140:intron 25.0%
!!! AACCAGTTTTATAAAGAGTA+GGG - chr5_3:5965374-5965393 Msa0794140:intron 25.0%
! TTCATTCTTACTAATATTGC+AGG + chr5_3:5965633-5965652 None:intergenic 25.0%
!!! TTATCACTATATTGATTTGG+AGG - chr5_3:5965715-5965734 Msa0794140:intron 25.0%
! GATAACATTTCAGAGAAAAT+AGG - chr5_3:5965920-5965939 Msa0794140:intron 25.0%
! TGATGAACTTCTTTATCATT+GGG + chr5_3:5966058-5966077 None:intergenic 25.0%
! ATGATGAACTTCTTTATCAT+TGG + chr5_3:5966059-5966078 None:intergenic 25.0%
! CAAATCTAAATCTTGCTTTA+GGG - chr5_3:5966443-5966462 Msa0794140:intron 25.0%
! AAATCTAAATCTTGCTTTAG+GGG - chr5_3:5966444-5966463 Msa0794140:intron 25.0%
! AGAAAAATAACCATGCAAAT+AGG - chr5_3:5966545-5966564 Msa0794140:intron 25.0%
! GTAACATTCAGAAATTATGA+CGG + chr5_3:5966963-5966982 None:intergenic 25.0%
! CATAATTTCTGAATGTTACT+AGG - chr5_3:5966964-5966983 Msa0794140:five_prime_UTR 25.0%
! AATTCTTTTGATGGAAACGT+TGG - chr5_3:5958841-5958860 Msa0794140:CDS 30.0%
! CTAGAGTCATCGATTATTTA+TGG - chr5_3:5958951-5958970 Msa0794140:CDS 30.0%
! CATCGATTATTTATGGTGTT+TGG - chr5_3:5958958-5958977 Msa0794140:CDS 30.0%
! AGTAACAATCTGAGATAACA+GGG - chr5_3:5958981-5959000 Msa0794140:CDS 30.0%
AAGTTATAAGTACTCTTGAC+TGG - chr5_3:5959247-5959266 Msa0794140:CDS 30.0%
AGTTATAAGTACTCTTGACT+GGG - chr5_3:5959248-5959267 Msa0794140:CDS 30.0%
AGTATGAAGTCTATAACCAT+AGG + chr5_3:5959384-5959403 None:intergenic 30.0%
TATTTGTATATGTGATGGCA+TGG - chr5_3:5959867-5959886 Msa0794140:intron 30.0%
TGTAACTATAACCTGAATCT+GGG - chr5_3:5959985-5960004 Msa0794140:intron 30.0%
TATCATCAGAAAACTCTTCA+GGG + chr5_3:5960120-5960139 None:intergenic 30.0%
TTATCATCAGAAAACTCTTC+AGG + chr5_3:5960121-5960140 None:intergenic 30.0%
TGTTCAGAATTCTATGAATG+AGG - chr5_3:5960162-5960181 Msa0794140:CDS 30.0%
GTTCAGAATTCTATGAATGA+GGG - chr5_3:5960163-5960182 Msa0794140:CDS 30.0%
GATCTTGTTGAATAAGTATC+AGG - chr5_3:5960309-5960328 Msa0794140:CDS 30.0%
! ACATACTTTTAGCGAATCAT+TGG + chr5_3:5960533-5960552 None:intergenic 30.0%
AGTTGAAGACTGTAAATGTT+CGG - chr5_3:5960600-5960619 Msa0794140:intron 30.0%
CTTTCCTTTATGTTGATCTT+CGG - chr5_3:5960743-5960762 Msa0794140:intron 30.0%
TTGATTGAGATGAAAATGGA+AGG - chr5_3:5960778-5960797 Msa0794140:intron 30.0%
ACAGTTAGAAATAGGAATTG+AGG + chr5_3:5960838-5960857 None:intergenic 30.0%
!! TCAATTCCTATTTCTAACTG+TGG - chr5_3:5960837-5960856 Msa0794140:intron 30.0%
AACTGTGGTGATTGAAAAAT+AGG - chr5_3:5960852-5960871 Msa0794140:intron 30.0%
!!! GTAAGACTTGTTTTACTGAA+AGG + chr5_3:5961015-5961034 None:intergenic 30.0%
TGACATAAAAATGTGTTCTG+GGG - chr5_3:5961171-5961190 Msa0794140:intron 30.0%
!!! TTTTGTTGTTCAGACATTGA+AGG - chr5_3:5961297-5961316 Msa0794140:intron 30.0%
!! TTTGTTGTTCAGACATTGAA+GGG - chr5_3:5961298-5961317 Msa0794140:intron 30.0%
! ATAGTGGAACCAATTTCTTA+GGG + chr5_3:5961455-5961474 None:intergenic 30.0%
GATAAATTAAAAGGGAAGTC+TGG - chr5_3:5961501-5961520 Msa0794140:CDS 30.0%
!!! TACTTTTTGAAATTTGACCC+CGG + chr5_3:5961599-5961618 None:intergenic 30.0%
!!! CGTTTTTTGCTCTTATGAAT+AGG - chr5_3:5961783-5961802 Msa0794140:CDS 30.0%
!!! TCATCACCAATTTTGACTTT+CGG + chr5_3:5961852-5961871 None:intergenic 30.0%
TTGATTCAATTGCACTTGAT+CGG + chr5_3:5961983-5962002 None:intergenic 30.0%
TTTAAAAGAATCAGGTTCGT+TGG - chr5_3:5962058-5962077 Msa0794140:CDS 30.0%
! CATTCCTAGACAGATATTTT+CGG + chr5_3:5962085-5962104 None:intergenic 30.0%
CAATATAAGCCGTAAAAGTT+TGG - chr5_3:5962259-5962278 Msa0794140:CDS 30.0%
GAAGTATATTATTCCTGCAA+TGG - chr5_3:5962315-5962334 Msa0794140:CDS 30.0%
AAAAAGGAAAATACCATTGC+AGG + chr5_3:5962331-5962350 None:intergenic 30.0%
!! AGAATATGGCTTTATTATGC+TGG + chr5_3:5962374-5962393 None:intergenic 30.0%
AGGGAGAAATACATAGAATA+TGG + chr5_3:5962388-5962407 None:intergenic 30.0%
TGTCAAAAATGTGAGGAATT+TGG - chr5_3:5962665-5962684 Msa0794140:intron 30.0%
TAAATTGAAAGCTGCAATAC+AGG - chr5_3:5962790-5962809 Msa0794140:CDS 30.0%
TTAAAAGGCCTGAAATTTAC+AGG - chr5_3:5962822-5962841 Msa0794140:CDS 30.0%
TCTTTCTTCCTGTAAATTTC+AGG + chr5_3:5962833-5962852 None:intergenic 30.0%
AATCAGATGTAGAATTCTCA+AGG + chr5_3:5962994-5963013 None:intergenic 30.0%
GATGTATTCATATTCAGGAA+AGG + chr5_3:5963188-5963207 None:intergenic 30.0%
TTCCTGAATATGAATACATC+TGG - chr5_3:5963188-5963207 Msa0794140:intron 30.0%
! TAACTAGTTGTCTTTAGTTC+TGG - chr5_3:5963227-5963246 Msa0794140:intron 30.0%
ATCATTCTTATATTGGCAGT+TGG - chr5_3:5963566-5963585 Msa0794140:CDS 30.0%
AAAGAAATGTTTGCATCGAA+TGG + chr5_3:5963592-5963611 None:intergenic 30.0%
! TTTGAGATTTACTCTCACAA+AGG - chr5_3:5963942-5963961 Msa0794140:intron 30.0%
TTGAGATTTACTCTCACAAA+GGG - chr5_3:5963943-5963962 Msa0794140:intron 30.0%
AAATTTACTAACACAGAAGC+AGG + chr5_3:5963972-5963991 None:intergenic 30.0%
CTGTGTTAGTAAATTTCTTG+GGG - chr5_3:5963976-5963995 Msa0794140:intron 30.0%
TTAGTAAATTTCTTGGGGAA+GGG - chr5_3:5963981-5964000 Msa0794140:intron 30.0%
!!! GTCTACTTTTTTTAGTAGCA+GGG - chr5_3:5964062-5964081 Msa0794140:CDS 30.0%
!! ATCCCTAATGATATTGATTC+AGG - chr5_3:5964102-5964121 Msa0794140:intron 30.0%
! TGATGTTGATGAAATGCATT+AGG - chr5_3:5964174-5964193 Msa0794140:intron 30.0%
! GATGTTGATGAAATGCATTA+GGG - chr5_3:5964175-5964194 Msa0794140:intron 30.0%
!!! TGTCTTTTTTCTTTTTTGCG+GGG - chr5_3:5964310-5964329 Msa0794140:CDS 30.0%
! TTGCGTGACTGAAATTTTAA+TGG - chr5_3:5964375-5964394 Msa0794140:CDS 30.0%
TTCTTGTTGAAAAAGTGGTT+AGG + chr5_3:5964409-5964428 None:intergenic 30.0%
!!! CTCTTGACTATCCTATTTTT+TGG - chr5_3:5964460-5964479 Msa0794140:CDS 30.0%
!!! GGAATATGTTGCTTTTCTTA+TGG - chr5_3:5964489-5964508 Msa0794140:CDS 30.0%
! TTTTCTTATGGGGTGTATTT+AGG - chr5_3:5964501-5964520 Msa0794140:CDS 30.0%
TTTCTTATGGGGTGTATTTA+GGG - chr5_3:5964502-5964521 Msa0794140:CDS 30.0%
TATAGTTGGAGATTGATCTA+GGG + chr5_3:5964711-5964730 None:intergenic 30.0%
GTATTGTTACTCACTATAGT+TGG + chr5_3:5964725-5964744 None:intergenic 30.0%
!! TTTTAACTGTAGTTGAGGAA+GGG + chr5_3:5964988-5965007 None:intergenic 30.0%
!! TTTTTAACTGTAGTTGAGGA+AGG + chr5_3:5964989-5965008 None:intergenic 30.0%
! TTTATGGTCTGAAATGAATG+TGG - chr5_3:5965103-5965122 Msa0794140:intron 30.0%
! AATTGCTAACATGGAAGTAT+TGG + chr5_3:5965147-5965166 None:intergenic 30.0%
ACTTCCATGTTAGCAATTAT+TGG - chr5_3:5965149-5965168 Msa0794140:intron 30.0%
GGTACATATGTAGCAATTAA+TGG - chr5_3:5965207-5965226 Msa0794140:intron 30.0%
!! ACCAGTTTTATAAAGAGTAG+GGG - chr5_3:5965375-5965394 Msa0794140:intron 30.0%
TCAAGAAACCAAGAGATAAT+TGG + chr5_3:5965413-5965432 None:intergenic 30.0%
TGGTTTCTTGAAATATGTTC+TGG - chr5_3:5965422-5965441 Msa0794140:intron 30.0%
! TCTAAACCTTCTGAAGAAAT+GGG - chr5_3:5965491-5965510 Msa0794140:intron 30.0%
! ATCTTCTTTCTGTTTCCTTT+TGG + chr5_3:5965696-5965715 None:intergenic 30.0%
AAATTGATGAAGATCAGCAA+AGG - chr5_3:5965807-5965826 Msa0794140:intron 30.0%
TGCTGGAATCAATATAACTA+AGG - chr5_3:5965898-5965917 Msa0794140:intron 30.0%
! AGATTGTCACTATATTGACT+TGG - chr5_3:5965982-5966001 Msa0794140:five_prime_UTR 30.0%
AGATGTCAAACTGTCATTAA+AGG + chr5_3:5966224-5966243 None:intergenic 30.0%
ACATCTCTTGGAAATGATAT+TGG - chr5_3:5966238-5966257 Msa0794140:intron 30.0%
TTGATATTCTGAGTATCAAC+AGG + chr5_3:5966358-5966377 None:intergenic 30.0%
GTTGATACTCAGAATATCAA+TGG - chr5_3:5966358-5966377 Msa0794140:intron 30.0%
TGAATACTATGGCAATGAAA+GGG - chr5_3:5966395-5966414 Msa0794140:intron 30.0%
CCTAAAGCAAGATTTAGATT+TGG + chr5_3:5966445-5966464 None:intergenic 30.0%
CCAAATCTAAATCTTGCTTT+AGG - chr5_3:5966442-5966461 Msa0794140:intron 30.0%
!!! TGGTTATTTTTCTTTTCTGC+TGG + chr5_3:5966538-5966557 None:intergenic 30.0%
ACAAACAAAAGCTTCTTCAA+AGG - chr5_3:5966633-5966652 Msa0794140:intron 30.0%
!! CTTATTGACTCTTTGTTGTT+TGG + chr5_3:5966839-5966858 None:intergenic 30.0%
! TTTTCTGACTTCATCGCTAA+AGG - chr5_3:5958298-5958317 Msa0794140:CDS 35.0%
! ATGTTCCTTTTGATAGAGCT+AGG - chr5_3:5958499-5958518 Msa0794140:CDS 35.0%
! TGTTCCTTTTGATAGAGCTA+GGG - chr5_3:5958500-5958519 Msa0794140:CDS 35.0%
!! AAAACCCTAGCTCTATCAAA+AGG + chr5_3:5958507-5958526 None:intergenic 35.0%
TTGAATTTAATCACGTGGCT+TGG - chr5_3:5958755-5958774 Msa0794140:CDS 35.0%
!! TGGTGCGAGATTTGTTAATA+TGG - chr5_3:5958861-5958880 Msa0794140:CDS 35.0%
! GTGTTGTTCTACATGATATC+AGG - chr5_3:5958891-5958910 Msa0794140:CDS 35.0%
ACATGATATCAGGATCAAGA+AGG - chr5_3:5958901-5958920 Msa0794140:CDS 35.0%
! GAGTAACAATCTGAGATAAC+AGG - chr5_3:5958980-5958999 Msa0794140:CDS 35.0%
!! GTTATGAGGCTCTGAAATAA+TGG - chr5_3:5959050-5959069 Msa0794140:CDS 35.0%
! TTATTGTCGAACGAGTTGAA+AGG - chr5_3:5959089-5959108 Msa0794140:CDS 35.0%
!!! TTTTTAGCATTGATAGTGCG+AGG - chr5_3:5959177-5959196 Msa0794140:CDS 35.0%
! AGTAGAAAAGTATAGGCGTA+TGG - chr5_3:5959426-5959445 Msa0794140:CDS 35.0%
TTGAAATGCCTTCCTTTAAG+GGG + chr5_3:5959471-5959490 None:intergenic 35.0%
CTTGAAATGCCTTCCTTTAA+GGG + chr5_3:5959472-5959491 None:intergenic 35.0%
TCTTGAAATGCCTTCCTTTA+AGG + chr5_3:5959473-5959492 None:intergenic 35.0%
AATAAGCCTCTTAACGAAAC+TGG - chr5_3:5959546-5959565 Msa0794140:intron 35.0%
AGGTTATTGTTTAGGCTAGT+AGG + chr5_3:5959582-5959601 None:intergenic 35.0%
TCCAAGAACATTTGAAGGTT+TGG + chr5_3:5959690-5959709 None:intergenic 35.0%
CTTTCTCCAAGAACATTTGA+AGG + chr5_3:5959695-5959714 None:intergenic 35.0%
! AACATATCCAAGTTAGCCTA+TGG - chr5_3:5959721-5959740 Msa0794140:intron 35.0%
AACATATGAAGTTCAGTGAC+TGG + chr5_3:5959786-5959805 None:intergenic 35.0%
TGGTGAAACTTTGACATTGA+TGG - chr5_3:5959887-5959906 Msa0794140:intron 35.0%
GGTGAAACTTTGACATTGAT+GGG - chr5_3:5959888-5959907 Msa0794140:intron 35.0%
GAATTACTGAAAGGATGAGT+CGG - chr5_3:5959919-5959938 Msa0794140:intron 35.0%
GTGTAACTATAACCTGAATC+TGG - chr5_3:5959984-5960003 Msa0794140:intron 35.0%
ATCATCAGAAAACTCTTCAG+GGG + chr5_3:5960119-5960138 None:intergenic 35.0%
TCATGACCTTCTAAATGGTT+GGG + chr5_3:5960337-5960356 None:intergenic 35.0%
ATCATGACCTTCTAAATGGT+TGG + chr5_3:5960338-5960357 None:intergenic 35.0%
TGTCATCATGACCTTCTAAA+TGG + chr5_3:5960342-5960361 None:intergenic 35.0%
TGAGAAATGCACTGCAAATA+AGG - chr5_3:5960486-5960505 Msa0794140:intron 35.0%
TTTCTCATGATGTCCATCAT+GGG + chr5_3:5960626-5960645 None:intergenic 35.0%
CGAAGATCAACATAAAGGAA+AGG + chr5_3:5960745-5960764 None:intergenic 35.0%
! ATGGAAGGAGTGTAATGTAA+CGG - chr5_3:5960793-5960812 Msa0794140:intron 35.0%
CAATCACCACAGTTAGAAAT+AGG + chr5_3:5960846-5960865 None:intergenic 35.0%
GGTGATTGAAAAATAGGTGA+AGG - chr5_3:5960858-5960877 Msa0794140:intron 35.0%
!! ATCTACTTGCTATATGCTGT+AGG - chr5_3:5960914-5960933 Msa0794140:intron 35.0%
CAAGCTCTTGAATTAAGCAA+AGG - chr5_3:5961411-5961430 Msa0794140:intron 35.0%
ATTAAGCAAAGGATCACCAA+AGG - chr5_3:5961422-5961441 Msa0794140:CDS 35.0%
!! GATAGTGGAACCAATTTCTT+AGG + chr5_3:5961456-5961475 None:intergenic 35.0%
AATGAAGATTCTCGTGATAG+TGG + chr5_3:5961471-5961490 None:intergenic 35.0%
! TTTGAGATCTTTCAAGTAGC+TGG - chr5_3:5961675-5961694 Msa0794140:intron 35.0%
! TTGAGATCTTTCAAGTAGCT+GGG - chr5_3:5961676-5961695 Msa0794140:intron 35.0%
GACATGATACAATATCGTCA+TGG + chr5_3:5961712-5961731 None:intergenic 35.0%
GATATTGTATCATGTCTCCT+TGG - chr5_3:5961716-5961735 Msa0794140:intron 35.0%
! GCTTGATAATATGAAAGCCA+AGG + chr5_3:5961736-5961755 None:intergenic 35.0%
! TTTTTCCACCAAGACCAAAA+GGG - chr5_3:5961874-5961893 Msa0794140:CDS 35.0%
CAACTATTCAGGACTTGAAA+GGG - chr5_3:5962027-5962046 Msa0794140:CDS 35.0%
AATATCTGTCTAGGAATGAC+AGG - chr5_3:5962087-5962106 Msa0794140:CDS 35.0%
AACTGCTGAAGGCTTAATAA+CGG + chr5_3:5962177-5962196 None:intergenic 35.0%
TCTCGATTATTAACTGCTGA+AGG + chr5_3:5962188-5962207 None:intergenic 35.0%
CCTAGCTGAAACTAATACAA+GGG + chr5_3:5962407-5962426 None:intergenic 35.0%
! CCTTGTATTAGTTTCAGCTA+GGG - chr5_3:5962405-5962424 Msa0794140:CDS 35.0%
AGAGTCTTAGTGATCGTTTA+AGG - chr5_3:5962609-5962628 Msa0794140:intron 35.0%
! TATGGACTTTTTGATGCAGT+GGG + chr5_3:5962644-5962663 None:intergenic 35.0%
TCCATACTGTCAAAAATGTG+AGG - chr5_3:5962658-5962677 Msa0794140:intron 35.0%
! TCCTCACATTTTTGACAGTA+TGG + chr5_3:5962662-5962681 None:intergenic 35.0%
TCAAAAGAGGAGATGCATAA+AGG - chr5_3:5962764-5962783 Msa0794140:CDS 35.0%
! TACAGGCTGCTTTACTTAAA+AGG - chr5_3:5962807-5962826 Msa0794140:CDS 35.0%
GTGTGTTAGAAACCAAAACT+TGG + chr5_3:5962925-5962944 None:intergenic 35.0%
AGTTGTGAACAAAGATCAGT+TGG + chr5_3:5963064-5963083 None:intergenic 35.0%
ACTGATCTTTGTTCACAACT+AGG - chr5_3:5963064-5963083 Msa0794140:CDS 35.0%
TTGTTCACAACTAGGAAAGT+CGG - chr5_3:5963072-5963091 Msa0794140:CDS 35.0%
TGCCAGATGTATTCATATTC+AGG + chr5_3:5963193-5963212 None:intergenic 35.0%
!!! AGCTTTTTTGTTTGCATGCA+GGG - chr5_3:5963300-5963319 Msa0794140:intron 35.0%
!! GTCTTTGAAGTGCATAGAAA+TGG - chr5_3:5963325-5963344 Msa0794140:intron 35.0%
TGAACTCCAGTACATAATTC+TGG + chr5_3:5963358-5963377 None:intergenic 35.0%
! GCACTTAAAGGAATTTTCGA+TGG - chr5_3:5963708-5963727 Msa0794140:intron 35.0%
!! TGAATTTTCTGGAAGCTGAT+TGG + chr5_3:5963757-5963776 None:intergenic 35.0%
! AGTTGCTCAAAATGTTGGTT+TGG + chr5_3:5963812-5963831 None:intergenic 35.0%
TCAGAAGTTGCTCAAAATGT+TGG + chr5_3:5963817-5963836 None:intergenic 35.0%
! CATTTTGAGCAACTTCTGAA+TGG - chr5_3:5963818-5963837 Msa0794140:intron 35.0%
! AACTTCTGAATGGATGCTTT+TGG - chr5_3:5963828-5963847 Msa0794140:CDS 35.0%
! ACTTCTGAATGGATGCTTTT+GGG - chr5_3:5963829-5963848 Msa0794140:CDS 35.0%
TATGCTTAGATTAGCGTTCA+TGG - chr5_3:5963873-5963892 Msa0794140:CDS 35.0%
GTTAGTAAATTTCTTGGGGA+AGG - chr5_3:5963980-5963999 Msa0794140:intron 35.0%
TTCTATCTAAGTTCACCTGA+CGG - chr5_3:5964040-5964059 Msa0794140:CDS 35.0%
ACTAAAAAAAGTAGACCGTC+AGG + chr5_3:5964058-5964077 None:intergenic 35.0%
!!! GGTCTACTTTTTTTAGTAGC+AGG - chr5_3:5964061-5964080 Msa0794140:CDS 35.0%
ATCATTAGGGATTACCACAT+AGG + chr5_3:5964094-5964113 None:intergenic 35.0%
AAAACCCAATAATTTGACGG+TGG - chr5_3:5964245-5964264 Msa0794140:CDS 35.0%
AGAACCACCGTCAAATTATT+GGG + chr5_3:5964252-5964271 None:intergenic 35.0%
! TTCTCCTTTTAATCACCAGT+GGG - chr5_3:5964268-5964287 Msa0794140:CDS 35.0%
AAAACCCACTGGTGATTAAA+AGG + chr5_3:5964275-5964294 None:intergenic 35.0%
!!! GTCTTTTTTCTTTTTTGCGG+GGG - chr5_3:5964311-5964330 Msa0794140:CDS 35.0%
!!! TCTTTTTTCTTTTTTGCGGG+GGG - chr5_3:5964312-5964331 Msa0794140:CDS 35.0%
!!! TGACTATCCTATTTTTTGGC+AGG - chr5_3:5964464-5964483 Msa0794140:CDS 35.0%
TTCTTATGGGGTGTATTTAG+GGG - chr5_3:5964503-5964522 Msa0794140:CDS 35.0%
CTATAGTTGGAGATTGATCT+AGG + chr5_3:5964712-5964731 None:intergenic 35.0%
GTACCATCTGACATTTCTAA+GGG + chr5_3:5964788-5964807 None:intergenic 35.0%
TGTACCATCTGACATTTCTA+AGG + chr5_3:5964789-5964808 None:intergenic 35.0%
TGTCAACAGACGAAATTTAC+TGG - chr5_3:5964845-5964864 Msa0794140:CDS 35.0%
AATCTGCTTAGATGTACTTG+TGG - chr5_3:5964936-5964955 Msa0794140:five_prime_UTR 35.0%
TTTAACTGTAGTTGAGGAAG+GGG + chr5_3:5964987-5965006 None:intergenic 35.0%
ATTGGAGTGTAATAATGCCA+AGG + chr5_3:5965129-5965148 None:intergenic 35.0%
GAGACCAATAATTGCTAACA+TGG + chr5_3:5965156-5965175 None:intergenic 35.0%
GGAAAATAAACAGGGTTGTT+GGG - chr5_3:5965186-5965205 Msa0794140:intron 35.0%
! AGAAATGGTCAAATTGGTCT+AGG + chr5_3:5965237-5965256 None:intergenic 35.0%
ACACACAGAAATGGTCAAAT+TGG + chr5_3:5965243-5965262 None:intergenic 35.0%
ATAAACAGTGATCACAAGAC+AGG + chr5_3:5965353-5965372 None:intergenic 35.0%
ACCCCTACTCTTTATAAAAC+TGG + chr5_3:5965379-5965398 None:intergenic 35.0%
! GTCTAAACCTTCTGAAGAAA+TGG - chr5_3:5965490-5965509 Msa0794140:intron 35.0%
CTATCTTGATTGCTAACAGA+AGG + chr5_3:5965602-5965621 None:intergenic 35.0%
! AAATGGTCACTATATCGACT+TGG - chr5_3:5965847-5965866 Msa0794140:intron 35.0%
GAAAATCAAGAAACAGATGC+TGG - chr5_3:5965881-5965900 Msa0794140:intron 35.0%
TAGGTGATCAAGATAAGCAA+CGG - chr5_3:5965939-5965958 Msa0794140:intron 35.0%
!! TTGTCACTATATTGACTTGG+AGG - chr5_3:5965985-5966004 Msa0794140:five_prime_UTR 35.0%
TCATCATGTTGATCTATCAG+TGG - chr5_3:5966072-5966091 Msa0794140:intron 35.0%
TTTCCATTTACCTCATTCCA+AGG + chr5_3:5966115-5966134 None:intergenic 35.0%
ATTTATGATCGTCACAGTTC+TGG - chr5_3:5966187-5966206 Msa0794140:intron 35.0%
AATGACAGTTTGACATCTCT+TGG - chr5_3:5966226-5966245 Msa0794140:intron 35.0%
! TTTTGTCTCCAACTGAAGAA+CGG + chr5_3:5966267-5966286 None:intergenic 35.0%
!!! CTCACGGATGATTTTTTCAA+CGG + chr5_3:5966305-5966324 None:intergenic 35.0%
CTGAATACTATGGCAATGAA+AGG - chr5_3:5966394-5966413 Msa0794140:intron 35.0%
AGATGGAAACGATAGAGAAA+GGG + chr5_3:5966602-5966621 None:intergenic 35.0%
AAGATGGAAACGATAGAGAA+AGG + chr5_3:5966603-5966622 None:intergenic 35.0%
ATCGTTTCCATCTTCAAACA+TGG - chr5_3:5966609-5966628 Msa0794140:intron 35.0%
GTTTGTTCCATGTTTGAAGA+TGG + chr5_3:5966619-5966638 None:intergenic 35.0%
AAAAGGAGAAATGAAGGACT+CGG + chr5_3:5966685-5966704 None:intergenic 35.0%
! AGTCCTTCATTTCTCCTTTT+TGG - chr5_3:5966685-5966704 Msa0794140:five_prime_UTR 35.0%
! GTCCTTCATTTCTCCTTTTT+GGG - chr5_3:5966686-5966705 Msa0794140:five_prime_UTR 35.0%
AGATAATTTACACGACAGAC+AGG + chr5_3:5966751-5966770 None:intergenic 35.0%
ATTATCTTGTTCGACAAAGC+CGG - chr5_3:5966764-5966783 Msa0794140:five_prime_UTR 35.0%
TATGATAGATAACCTTCCAG+CGG - chr5_3:5966792-5966811 Msa0794140:five_prime_UTR 35.0%
TGAATGTTACTAGGAACTTG+CGG - chr5_3:5966973-5966992 Msa0794140:five_prime_UTR 35.0%
!!! CTTGCGGATGACTTTTTTTA+TGG - chr5_3:5966989-5967008 Msa0794140:five_prime_UTR 35.0%
!!! GGATGACTTTTTTTATGGCA+GGG - chr5_3:5966994-5967013 Msa0794140:five_prime_UTR 35.0%
TAACACGGAAACAATCACGA+TGG + chr5_3:5958329-5958348 None:intergenic 40.0%
ACACCTTCAATCAGTAGTGT+CGG - chr5_3:5958797-5958816 Msa0794140:CDS 40.0%
! AAGGAGTTTTTCCAGATGCT+AGG - chr5_3:5958920-5958939 Msa0794140:CDS 40.0%
TGATCAACCACTTCTCGATT+AGG + chr5_3:5959326-5959345 None:intergenic 40.0%
! TGAAATGCCTTCCTTTAAGG+GGG + chr5_3:5959470-5959489 None:intergenic 40.0%
AAGTCATTAGCTCAAGAGAG+CGG - chr5_3:5959501-5959520 Msa0794140:intron 40.0%
ATCCAACCAGTTTCGTTAAG+AGG + chr5_3:5959555-5959574 None:intergenic 40.0%
GCCAAACCTTCAAATGTTCT+TGG - chr5_3:5959686-5959705 Msa0794140:intron 40.0%
! AAGTTAGCCTATGGTTTGCA+CGG - chr5_3:5959730-5959749 Msa0794140:intron 40.0%
GAAAACTTCTTCCCAGATTC+AGG + chr5_3:5959999-5960018 None:intergenic 40.0%
CAATTCAGAACAGTGGTATG+AGG - chr5_3:5960029-5960048 Msa0794140:intron 40.0%
ACATGCATGCAAGATGAACA+AGG + chr5_3:5960088-5960107 None:intergenic 40.0%
CGATTCTCTATCTGAAAACG+CGG - chr5_3:5960276-5960295 Msa0794140:CDS 40.0%
CTTTCTCATGATGTCCATCA+TGG + chr5_3:5960627-5960646 None:intergenic 40.0%
GAGTGATGAATCAGATGTTG+TGG - chr5_3:5960699-5960718 Msa0794140:intron 40.0%
TCAGCCGAAGATCAACATAA+AGG + chr5_3:5960750-5960769 None:intergenic 40.0%
GTGTAATGTAACGGCATATG+TGG - chr5_3:5960802-5960821 Msa0794140:intron 40.0%
!!! TTTTTGAAATTTGACCCCGG+AGG + chr5_3:5961596-5961615 None:intergenic 40.0%
TTTCATCTGTTGTGCTTCAC+TGG - chr5_3:5961626-5961645 Msa0794140:CDS 40.0%
! TTTCAAGTAGCTGGGTGAAT+GGG - chr5_3:5961684-5961703 Msa0794140:intron 40.0%
!! CGGCTTGGAATTTAAGTTGT+TGG + chr5_3:5961832-5961851 None:intergenic 40.0%
TCCAAGCCGAAAGTCAAAAT+TGG - chr5_3:5961843-5961862 Msa0794140:CDS 40.0%
!!! ACCAATTTTGACTTTCGGCT+TGG + chr5_3:5961847-5961866 None:intergenic 40.0%
! GTTTTTCCACCAAGACCAAA+AGG - chr5_3:5961873-5961892 Msa0794140:CDS 40.0%
! TTTTCCACCAAGACCAAAAG+GGG - chr5_3:5961875-5961894 Msa0794140:CDS 40.0%
! GTTTGTTCATTACCCCCTTT+TGG + chr5_3:5961891-5961910 None:intergenic 40.0%
TTCAAGTCCTGAATAGTTGC+AGG + chr5_3:5962026-5962045 None:intergenic 40.0%
GCAACTATTCAGGACTTGAA+AGG - chr5_3:5962026-5962045 Msa0794140:CDS 40.0%
TGGACCGAAAATATCTGTCT+AGG - chr5_3:5962078-5962097 Msa0794140:CDS 40.0%
AGTCGAAGATAAACCAGGAT+GGG - chr5_3:5962207-5962226 Msa0794140:CDS 40.0%
! CCCTTGTATTAGTTTCAGCT+AGG - chr5_3:5962404-5962423 Msa0794140:CDS 40.0%
CCCTAGCTGAAACTAATACA+AGG + chr5_3:5962408-5962427 None:intergenic 40.0%
CTGTAGAGCTTCATCATTAC+AGG + chr5_3:5962537-5962556 None:intergenic 40.0%
CTGTAATGATGAAGCTCTAC+AGG - chr5_3:5962535-5962554 Msa0794140:intron 40.0%
! GTATGGACTTTTTGATGCAG+TGG + chr5_3:5962645-5962664 None:intergenic 40.0%
GAATTTGGCCATTCACTAGA+AGG - chr5_3:5962680-5962699 Msa0794140:CDS 40.0%
TGCCTCAAGTATCTCAAAAG+AGG - chr5_3:5962751-5962770 Msa0794140:CDS 40.0%
!!! CTCCTCTTTTGAGATACTTG+AGG + chr5_3:5962756-5962775 None:intergenic 40.0%
! AACTTCACGAGACCAAGTTT+TGG - chr5_3:5962910-5962929 Msa0794140:CDS 40.0%
TGAAGAAACTCGTGAACAAC+AGG - chr5_3:5962964-5962983 Msa0794140:CDS 40.0%
! GTTAAGTTGCTTCAAATCGC+TGG + chr5_3:5963035-5963054 None:intergenic 40.0%
CTAGGAAAGTCGGATTTAGT+TGG - chr5_3:5963082-5963101 Msa0794140:CDS 40.0%
CTAGACAAGTCTCTCACTAA+GGG + chr5_3:5963124-5963143 None:intergenic 40.0%
TCTAGACAAGTCTCTCACTA+AGG + chr5_3:5963125-5963144 None:intergenic 40.0%
AGACTTGTCTAGAAAAGCTG+TGG - chr5_3:5963132-5963151 Msa0794140:CDS 40.0%
!! AAGTGTTGTTTCGAAGATGC+TGG - chr5_3:5963162-5963181 Msa0794140:intron 40.0%
!!! GAGCTTTTTTGTTTGCATGC+AGG - chr5_3:5963299-5963318 Msa0794140:intron 40.0%
!!! GCTTTTTTGTTTGCATGCAG+GGG - chr5_3:5963301-5963320 Msa0794140:intron 40.0%
AAGCCTCCAGAATTATGTAC+TGG - chr5_3:5963349-5963368 Msa0794140:intron 40.0%
ACTCCAGTACATAATTCTGG+AGG + chr5_3:5963355-5963374 None:intergenic 40.0%
AACTTCGTTGAGGGAAACTT+CGG + chr5_3:5963440-5963459 None:intergenic 40.0%
AAGTTTCACGCTTGAGTACA+TGG - chr5_3:5963455-5963474 Msa0794140:CDS 40.0%
TTGCTCTTTACTTCTTTGCC+AGG - chr5_3:5963518-5963537 Msa0794140:CDS 40.0%
TGCTCTTTACTTCTTTGCCA+GGG - chr5_3:5963519-5963538 Msa0794140:CDS 40.0%
AGCTATGAGAGACACTACAA+AGG - chr5_3:5963654-5963673 Msa0794140:intron 40.0%
! TTTCTGGAAGCTGATTGGAT+GGG + chr5_3:5963752-5963771 None:intergenic 40.0%
!! TTTTCTGGAAGCTGATTGGA+TGG + chr5_3:5963753-5963772 None:intergenic 40.0%
TCCAGAAAATTCACAGCGTA+AGG - chr5_3:5963764-5963783 Msa0794140:intron 40.0%
! TCCTTACGCTGTGAATTTTC+TGG + chr5_3:5963768-5963787 None:intergenic 40.0%
!! GCTCAAAATGTTGGTTTGGT+TGG + chr5_3:5963808-5963827 None:intergenic 40.0%
!!! TGAATGGATGCTTTTGGGTT+TGG - chr5_3:5963834-5963853 Msa0794140:CDS 40.0%
!!! GAATGGATGCTTTTGGGTTT+GGG - chr5_3:5963835-5963854 Msa0794140:CDS 40.0%
!!! AATGGATGCTTTTGGGTTTG+GGG - chr5_3:5963836-5963855 Msa0794140:CDS 40.0%
AGATTTACTCTCACAAAGGG+TGG - chr5_3:5963946-5963965 Msa0794140:intron 40.0%
GATTCGACTCTTACTAAGAG+TGG - chr5_3:5964012-5964031 Msa0794140:CDS 40.0%
GAGAACCACCGTCAAATTAT+TGG + chr5_3:5964253-5964272 None:intergenic 40.0%
! GTTCTCCTTTTAATCACCAG+TGG - chr5_3:5964267-5964286 Msa0794140:CDS 40.0%
! ATAGACGATCTAAAACCCAC+TGG + chr5_3:5964286-5964305 None:intergenic 40.0%
!!! TATCCTATTTTTTGGCAGGC+TGG - chr5_3:5964468-5964487 Msa0794140:CDS 40.0%
ATTCCAGCCTGCCAAAAAAT+AGG + chr5_3:5964474-5964493 None:intergenic 40.0%
TCTTATGGGGTGTATTTAGG+GGG - chr5_3:5964504-5964523 Msa0794140:CDS 40.0%
ACTGGCATTGCATTCAAACT+TGG + chr5_3:5964572-5964591 None:intergenic 40.0%
TTTGAATGCAATGCCAGTTG+AGG - chr5_3:5964574-5964593 Msa0794140:CDS 40.0%
GTTGAAGAATTCTCCTCAAC+TGG + chr5_3:5964590-5964609 None:intergenic 40.0%
CCTGCTTTGTCGGAATTAAT+TGG + chr5_3:5964665-5964684 None:intergenic 40.0%
CCAATTAATTCCGACAAAGC+AGG - chr5_3:5964662-5964681 Msa0794140:CDS 40.0%
AAGTGTATTGCCTGCTTTGT+CGG + chr5_3:5964675-5964694 None:intergenic 40.0%
TGATCTAGGGAAGTTGAAGA+AGG + chr5_3:5964698-5964717 None:intergenic 40.0%
GTACCCTTAGAAATGTCAGA+TGG - chr5_3:5964782-5964801 Msa0794140:CDS 40.0%
!! GAAATTTACTGGTTCTTCCC+TGG - chr5_3:5964856-5964875 Msa0794140:CDS 40.0%
GGAATGATCAGAAAACAACG+TGG + chr5_3:5964965-5964984 None:intergenic 40.0%
TTAACTGTAGTTGAGGAAGG+GGG + chr5_3:5964986-5965005 None:intergenic 40.0%
GGGAAAATAAACAGGGTTGT+TGG - chr5_3:5965185-5965204 Msa0794140:intron 40.0%
CTAGTGTAGTAGAGGATGAA+CGG - chr5_3:5965459-5965478 Msa0794140:intron 40.0%
AACAGGTGTGAGTAACAAGA+TGG - chr5_3:5965514-5965533 Msa0794140:intron 40.0%
ACTGTGATGAAGATCAGCAA+AGG - chr5_3:5965669-5965688 Msa0794140:intron 40.0%
AAGATCAGCAAAGGACCAAA+AGG - chr5_3:5965678-5965697 Msa0794140:intron 40.0%
ACACATGCTGCAAGCAATAT+TGG - chr5_3:5965758-5965777 Msa0794140:intron 40.0%
TGCTGCAAGCAATATTGGTA+AGG - chr5_3:5965763-5965782 Msa0794140:intron 40.0%
TCCAAGAGGAAACATGGAAA+TGG - chr5_3:5965830-5965849 Msa0794140:intron 40.0%
ACCATTTCCATGTTTCCTCT+TGG + chr5_3:5965834-5965853 None:intergenic 40.0%
AAGATAAGCAACGGCTTAAG+AGG - chr5_3:5965948-5965967 Msa0794140:intron 40.0%
CTTCTTTATCATTGGGTAGC+TGG + chr5_3:5966051-5966070 None:intergenic 40.0%
CTGGTTTACAGAAAATGCCT+TGG - chr5_3:5966095-5966114 Msa0794140:intron 40.0%
ACAGAAAATGCCTTGGAATG+AGG - chr5_3:5966102-5966121 Msa0794140:intron 40.0%
ATGCCTTGGAATGAGGTAAA+TGG - chr5_3:5966109-5966128 Msa0794140:intron 40.0%
TTTGTCTCCAACTGAAGAAC+GGG + chr5_3:5966266-5966285 None:intergenic 40.0%
CGTTGAAAAAATCATCCGTG+AGG - chr5_3:5966303-5966322 Msa0794140:intron 40.0%
CTGAGTATCAACAGGAAAGA+AGG + chr5_3:5966350-5966369 None:intergenic 40.0%
GAATATCAATGGCTCGCAAT+CGG - chr5_3:5966369-5966388 Msa0794140:intron 40.0%
CTCCCAAAAAGGAGAAATGA+AGG + chr5_3:5966691-5966710 None:intergenic 40.0%
!! CTTCATTTCTCCTTTTTGGG+AGG - chr5_3:5966689-5966708 Msa0794140:five_prime_UTR 40.0%
GGTTATCTATCATACACGAC+CGG + chr5_3:5966786-5966805 None:intergenic 40.0%
!! ACTCTTTGTTGTTTGGACGA+TGG + chr5_3:5966832-5966851 None:intergenic 40.0%
!!! CGGATGACTTTTTTTATGGC+AGG - chr5_3:5966993-5967012 Msa0794140:five_prime_UTR 40.0%
GAAATCTATCTAACCCCAGC+TGG + chr5_3:5957945-5957964 None:intergenic 45.0%
! TGACCGACACTACTGATTGA+AGG + chr5_3:5958803-5958822 None:intergenic 45.0%
! GAGTTTTTCCAGATGCTAGG+AGG - chr5_3:5958923-5958942 Msa0794140:CDS 45.0%
! TGTCGAACGAGTTGAAAGGA+TGG - chr5_3:5959093-5959112 Msa0794140:CDS 45.0%
! GTCGAACGAGTTGAAAGGAT+GGG - chr5_3:5959094-5959113 Msa0794140:CDS 45.0%
! AACGAGTTGAAAGGATGGGT+TGG - chr5_3:5959098-5959117 Msa0794140:CDS 45.0%
! ACGAGTTGAAAGGATGGGTT+GGG - chr5_3:5959099-5959118 Msa0794140:CDS 45.0%
!! ATTGATAGTGCGAGGATCGT+AGG - chr5_3:5959185-5959204 Msa0794140:CDS 45.0%
AGGATCGTAGGAATGGAAGT+TGG - chr5_3:5959197-5959216 Msa0794140:CDS 45.0%
ATCGTAGGAATGGAAGTTGG+AGG - chr5_3:5959200-5959219 Msa0794140:CDS 45.0%
GTGTTGTCCTAATCGAGAAG+TGG - chr5_3:5959316-5959335 Msa0794140:CDS 45.0%
GCGTATGGCTGTTGAGAATT+AGG - chr5_3:5959441-5959460 Msa0794140:CDS 45.0%
GAATTAGGATCCCCCCTTAA+AGG - chr5_3:5959456-5959475 Msa0794140:CDS 45.0%
! GAAATGCCTTCCTTTAAGGG+GGG + chr5_3:5959469-5959488 None:intergenic 45.0%
AGCCTCTTAACGAAACTGGT+TGG - chr5_3:5959550-5959569 Msa0794140:intron 45.0%
GTGCAAACCATAGGCTAACT+TGG + chr5_3:5959731-5959750 None:intergenic 45.0%
GCACGGTTTCCACACTTTAT+TGG - chr5_3:5959747-5959766 Msa0794140:intron 45.0%
CATTGCGCAATTCAGAACAG+TGG - chr5_3:5960022-5960041 Msa0794140:intron 45.0%
AGTGGTATGAGGCTTGAATC+AGG - chr5_3:5960040-5960059 Msa0794140:intron 45.0%
GTGGTATGAGGCTTGAATCA+GGG - chr5_3:5960041-5960060 Msa0794140:intron 45.0%
TCTGATGATAACTGTCGCTC+AGG - chr5_3:5960130-5960149 Msa0794140:CDS 45.0%
CTGATGATAACTGTCGCTCA+GGG - chr5_3:5960131-5960150 Msa0794140:CDS 45.0%
TGATGATAACTGTCGCTCAG+GGG - chr5_3:5960132-5960151 Msa0794140:CDS 45.0%
! GCTGCAAGTTTTCACAAGCT+CGG + chr5_3:5960210-5960229 None:intergenic 45.0%
GCTTGTGAAAACTTGCAGCA+CGG - chr5_3:5960211-5960230 Msa0794140:CDS 45.0%
CAGGATCCCAACCATTTAGA+AGG - chr5_3:5960328-5960347 Msa0794140:CDS 45.0%
TTCTCACCAGAAGTAGCAAC+AGG + chr5_3:5960472-5960491 None:intergenic 45.0%
TCAGGATCTGCTTGTGACTT+TGG + chr5_3:5960556-5960575 None:intergenic 45.0%
TGTAAATGTTCGGCCCATGA+TGG - chr5_3:5960610-5960629 Msa0794140:intron 45.0%
TCATGAGAAAGCTGAAGAGC+TGG - chr5_3:5960636-5960655 Msa0794140:intron 45.0%
GAAGAGCTGGTTAAATCACC+TGG - chr5_3:5960649-5960668 Msa0794140:intron 45.0%
GGTTAAATCACCTGGAAAGC+AGG - chr5_3:5960657-5960676 Msa0794140:intron 45.0%
GATTGAGATTCCTGCTTTCC+AGG + chr5_3:5960670-5960689 None:intergenic 45.0%
ATATGCTGTAGGTGCACTGA+TGG - chr5_3:5960925-5960944 Msa0794140:intron 45.0%
ATGCTTGAGAAACTCCCTGA+AGG - chr5_3:5961073-5961092 Msa0794140:intron 45.0%
TGCTTGAGAAACTCCCTGAA+GGG - chr5_3:5961074-5961093 Msa0794140:intron 45.0%
TGAAGAATGCCAAGATGCAG+TGG - chr5_3:5961108-5961127 Msa0794140:intron 45.0%
TTTCAGCTTCCACTGCATCT+TGG + chr5_3:5961120-5961139 None:intergenic 45.0%
CAGTGGAAGCTGAAAAGAAG+AGG - chr5_3:5961125-5961144 Msa0794140:intron 45.0%
GAAGCTGAAAAGAAGAGGCT+GGG - chr5_3:5961130-5961149 Msa0794140:intron 45.0%
ACTTCCACGTCACAAGTTTC+TGG - chr5_3:5961339-5961358 Msa0794140:intron 45.0%
TTTGCCAGAAACTTGTGACG+TGG + chr5_3:5961346-5961365 None:intergenic 45.0%
ACGTCCTGACAACATTGAAG+TGG - chr5_3:5961368-5961387 Msa0794140:intron 45.0%
TTCTTAGGGCTTGACACCTT+TGG + chr5_3:5961441-5961460 None:intergenic 45.0%
GGTGTCAAGCCCTAAGAAAT+TGG - chr5_3:5961443-5961462 Msa0794140:CDS 45.0%
! CTTTCAAGTAGCTGGGTGAA+TGG - chr5_3:5961683-5961702 Msa0794140:intron 45.0%
TTTCCACCAAGACCAAAAGG+GGG - chr5_3:5961876-5961895 Msa0794140:CDS 45.0%
! TCATTACCCCCTTTTGGTCT+TGG + chr5_3:5961885-5961904 None:intergenic 45.0%
ACCTAAGCCTGCAACTATTC+AGG - chr5_3:5962016-5962035 Msa0794140:CDS 45.0%
TCCTGAATAGTTGCAGGCTT+AGG + chr5_3:5962020-5962039 None:intergenic 45.0%
GAAACAACAGAACTAGCCAC+AGG + chr5_3:5962113-5962132 None:intergenic 45.0%
!! TTCTGTTGTTTCCACACCCA+AGG - chr5_3:5962121-5962140 Msa0794140:CDS 45.0%
!! TCTGTTGTTTCCACACCCAA+GGG - chr5_3:5962122-5962141 Msa0794140:CDS 45.0%
TTAATAACGGTTTCTCCCCG+AGG + chr5_3:5962164-5962183 None:intergenic 45.0%
TCGAGAGTCGAAGATAAACC+AGG - chr5_3:5962202-5962221 Msa0794140:CDS 45.0%
GAGTCGAAGATAAACCAGGA+TGG - chr5_3:5962206-5962225 Msa0794140:CDS 45.0%
! CCTGAGGCTCCAAACTTTTA+CGG + chr5_3:5962271-5962290 None:intergenic 45.0%
! CGTAAAAGTTTGGAGCCTCA+GGG - chr5_3:5962269-5962288 Msa0794140:CDS 45.0%
!! GCTAGGGCATTTTTCTGTAG+AGG - chr5_3:5962421-5962440 Msa0794140:CDS 45.0%
ATCACGAGAGACAGCAAATC+AGG - chr5_3:5962571-5962590 Msa0794140:intron 45.0%
ACGATCACTAAGACTCTCTC+TGG + chr5_3:5962606-5962625 None:intergenic 45.0%
CTGTGCAACCTTCTAGTGAA+TGG + chr5_3:5962691-5962710 None:intergenic 45.0%
GCTGGTAATCTGCAAGAATC+TGG - chr5_3:5962710-5962729 Msa0794140:CDS 45.0%
ACCGATGAGATTCCTACATC+AGG - chr5_3:5962866-5962885 Msa0794140:CDS 45.0%
GCCTGATGTAGGAATCTCAT+CGG + chr5_3:5962870-5962889 None:intergenic 45.0%
TGAGATTCCTACATCAGGCA+CGG - chr5_3:5962871-5962890 Msa0794140:CDS 45.0%
ATCCTCTTCTGCATCTCCTA+AGG - chr5_3:5963387-5963406 Msa0794140:CDS 45.0%
AACCTTAGGAGATGCAGAAG+AGG + chr5_3:5963392-5963411 None:intergenic 45.0%
TGCATCTCCTAAGGTTCTTG+AGG - chr5_3:5963396-5963415 Msa0794140:CDS 45.0%
GTCACTACCTCAAGAACCTT+AGG + chr5_3:5963406-5963425 None:intergenic 45.0%
GGAAACTTCGGGACTAAACT+TGG + chr5_3:5963428-5963447 None:intergenic 45.0%
ACTTCGTTGAGGGAAACTTC+GGG + chr5_3:5963439-5963458 None:intergenic 45.0%
CAAGCGTGAAACTTCGTTGA+GGG + chr5_3:5963449-5963468 None:intergenic 45.0%
TCAAGCGTGAAACTTCGTTG+AGG + chr5_3:5963450-5963469 None:intergenic 45.0%
TCTTTGCCAGGGATGTTGAA+AGG - chr5_3:5963530-5963549 Msa0794140:CDS 45.0%
TACTTGCCTTTCAACATCCC+TGG + chr5_3:5963539-5963558 None:intergenic 45.0%
GAGACACTACAAAGGTCTAC+TGG - chr5_3:5963662-5963681 Msa0794140:intron 45.0%
!! TTTTCTTTTTTGCGGGGGGT+AGG - chr5_3:5964316-5964335 Msa0794140:CDS 45.0%
!!! TTTCTTTTTTGCGGGGGGTA+GGG - chr5_3:5964317-5964336 Msa0794140:CDS 45.0%
! TCTGAGCGTTGTTTGTCGAA+GGG - chr5_3:5964626-5964645 Msa0794140:CDS 45.0%
GTTGTGAACACAACTGTGTC+TGG + chr5_3:5964760-5964779 None:intergenic 45.0%
TCGACAGCAAAACTGCATTC+AGG - chr5_3:5964810-5964829 Msa0794140:CDS 45.0%
CGACAGCAAAACTGCATTCA+GGG - chr5_3:5964811-5964830 Msa0794140:CDS 45.0%
! GTCTGAAATGAATGTGGCCT+TGG - chr5_3:5965109-5965128 Msa0794140:intron 45.0%
! ATGGTCAAATTGGTCTAGGC+TGG + chr5_3:5965233-5965252 None:intergenic 45.0%
CACACACACACACACAGAAA+TGG + chr5_3:5965252-5965271 None:intergenic 45.0%
CTCTGCTGCCAATTATCTCT+TGG - chr5_3:5965402-5965421 Msa0794140:intron 45.0%
GCAGAAAGCTAGTGTAGTAG+AGG - chr5_3:5965451-5965470 Msa0794140:intron 45.0%
CCTGTTCCCATTTCTTCAGA+AGG + chr5_3:5965500-5965519 None:intergenic 45.0%
! CCTTCTGAAGAAATGGGAAC+AGG - chr5_3:5965497-5965516 Msa0794140:intron 45.0%
AGGTGTGAGTAACAAGATGG+TGG - chr5_3:5965517-5965536 Msa0794140:intron 45.0%
AAGATCAGCAAAGGTCCAAG+AGG - chr5_3:5965816-5965835 Msa0794140:intron 45.0%
CAAAGGTCCAAGAGGAAACA+TGG - chr5_3:5965824-5965843 Msa0794140:intron 45.0%
!! TGGTCACTATATCGACTTGG+AGG - chr5_3:5965850-5965869 Msa0794140:intron 45.0%
CATGTTGATCTATCAGTGGC+TGG - chr5_3:5966076-5966095 Msa0794140:intron 45.0%
AAAGTTCCAGAAAGAAGCCG+AGG - chr5_3:5966149-5966168 Msa0794140:intron 45.0%
! AAGAAGCCGAGGACAAGTTT+TGG - chr5_3:5966160-5966179 Msa0794140:intron 45.0%
ATCTCGCCAAAACTTGTCCT+CGG + chr5_3:5966169-5966188 None:intergenic 45.0%
! TATGATCGTCACAGTTCTGG+AGG - chr5_3:5966190-5966209 Msa0794140:intron 45.0%
! ATTGGTTCCCGTTCTTCAGT+TGG - chr5_3:5966256-5966275 Msa0794140:intron 45.0%
AAAAATCATCCGTGAGGACC+TGG - chr5_3:5966309-5966328 Msa0794140:intron 45.0%
AAAATCATCCGTGAGGACCT+GGG - chr5_3:5966310-5966329 Msa0794140:intron 45.0%
!! GCAATCGGTGCTGAATACTA+TGG - chr5_3:5966384-5966403 Msa0794140:intron 45.0%
GTATGCTGCCTTTCCTAGTT+GGG - chr5_3:5966512-5966531 Msa0794140:intron 45.0%
CATCTTCTGGCCTATTTGCA+TGG + chr5_3:5966558-5966577 None:intergenic 45.0%
CTGTGTATCTCCTCCCAAAA+AGG + chr5_3:5966702-5966721 None:intergenic 45.0%
!!! ATTTTTTATAATTTTATCTT+TGG - chr5_3:5961650-5961669 Msa0794140:intron 5.0%
!! TACTACGAGTGTCGACGTGT+CGG + chr5_3:5958647-5958666 None:intergenic 50.0%
! TCACGTGGCTTGGAAAGTGT+CGG - chr5_3:5958765-5958784 Msa0794140:CDS 50.0%
!! CTTGGAAAGTGTCGGATACC+TGG - chr5_3:5958773-5958792 Msa0794140:CDS 50.0%
! CTACTGATTGAAGGTGTGCC+AGG + chr5_3:5958794-5958813 None:intergenic 50.0%
TAGTGCGAGGATCGTAGGAA+TGG - chr5_3:5959190-5959209 Msa0794140:CDS 50.0%
TAGGATCCCCCCTTAAAGGA+AGG - chr5_3:5959460-5959479 Msa0794140:CDS 50.0%
GTGGAAACCGTGCAAACCAT+AGG + chr5_3:5959740-5959759 None:intergenic 50.0%
CAGAAAACTCTTCAGGGGCA+TGG + chr5_3:5960114-5960133 None:intergenic 50.0%
AGCAACAGGTGCACTCTCTT+TGG + chr5_3:5960458-5960477 None:intergenic 50.0%
! AGTGCACCTGTTGCTACTTC+TGG - chr5_3:5960463-5960482 Msa0794140:CDS 50.0%
! GTGAAGGTATGCGACATCTG+TGG - chr5_3:5960874-5960893 Msa0794140:intron 50.0%
GCTTGAGAAACTCCCTGAAG+GGG - chr5_3:5961075-5961094 Msa0794140:intron 50.0%
AGAAACTCCCTGAAGGGGAT+TGG - chr5_3:5961080-5961099 Msa0794140:intron 50.0%
CACACAACCAATCCCCTTCA+GGG + chr5_3:5961090-5961109 None:intergenic 50.0%
TCACACAACCAATCCCCTTC+AGG + chr5_3:5961091-5961110 None:intergenic 50.0%
GGAAGCTGAAAAGAAGAGGC+TGG - chr5_3:5961129-5961148 Msa0794140:intron 50.0%
GGAGCCACTTCAATGTTGTC+AGG + chr5_3:5961375-5961394 None:intergenic 50.0%
! AGAGCTTGCCTTTTTGCAGC+TGG + chr5_3:5961399-5961418 None:intergenic 50.0%
ACTGCTCGATCTCCTTCCAT+TGG - chr5_3:5961570-5961589 Msa0794140:CDS 50.0%
!!! TTACCCCCTTTTGGTCTTGG+TGG + chr5_3:5961882-5961901 None:intergenic 50.0%
ACTTGATCGGCCCAAACTAG+AGG + chr5_3:5961970-5961989 None:intergenic 50.0%
GTAAGCTTCTGATCGCCCTT+GGG + chr5_3:5962140-5962159 None:intergenic 50.0%
TGTAAGCTTCTGATCGCCCT+TGG + chr5_3:5962141-5962160 None:intergenic 50.0%
GCGATCAGAAGCTTACACCT+CGG - chr5_3:5962144-5962163 Msa0794140:CDS 50.0%
CGATCAGAAGCTTACACCTC+GGG - chr5_3:5962145-5962164 Msa0794140:CDS 50.0%
GATCAGAAGCTTACACCTCG+GGG - chr5_3:5962146-5962165 Msa0794140:CDS 50.0%
! CCGTAAAAGTTTGGAGCCTC+AGG - chr5_3:5962268-5962287 Msa0794140:CDS 50.0%
AACACACCTGAACTACCCTG+AGG + chr5_3:5962287-5962306 None:intergenic 50.0%
! TTTGCTGTCTCTCGTGATCG+AGG + chr5_3:5962569-5962588 None:intergenic 50.0%
TCACTAGAAGGTTGCACAGC+TGG - chr5_3:5962692-5962711 Msa0794140:CDS 50.0%
TTCAACTCCGTGCCTGATGT+AGG + chr5_3:5962881-5962900 None:intergenic 50.0%
TGGCCATCACAGTTCCATCA+TGG - chr5_3:5963475-5963494 Msa0794140:CDS 50.0%
! CCACCATGATGGAACTGTGA+TGG + chr5_3:5963481-5963500 None:intergenic 50.0%
CCATCACAGTTCCATCATGG+TGG - chr5_3:5963478-5963497 Msa0794140:CDS 50.0%
CTTCTCTAGCACCACCATGA+TGG + chr5_3:5963492-5963511 None:intergenic 50.0%
TAGCAGGGCATATGCCTATG+TGG - chr5_3:5964077-5964096 Msa0794140:CDS 50.0%
TATGGGGTGTATTTAGGGGG+CGG - chr5_3:5964507-5964526 Msa0794140:CDS 50.0%
! GTCTGAGCGTTGTTTGTCGA+AGG - chr5_3:5964625-5964644 Msa0794140:CDS 50.0%
TCTGTGTGTGTGTGTGTGTG+TGG - chr5_3:5965254-5965273 Msa0794140:intron 50.0%
CTGTGTGTGTGTGTGTGTGT+GGG - chr5_3:5965255-5965274 Msa0794140:intron 50.0%
TGTGTGTGTGTGTGTGTGTG+GGG - chr5_3:5965256-5965275 Msa0794140:intron 50.0%
TGCTAACAGAAGGAATCGCC+TGG + chr5_3:5965592-5965611 None:intergenic 50.0%
ACTTGTCCTCGGCTTCTTTC+TGG + chr5_3:5966158-5966177 None:intergenic 50.0%
AGGTTCTTTCCATCGTTCCC+AGG + chr5_3:5966330-5966349 None:intergenic 50.0%
GGAAAGGCAGCATACCCTTA+GGG + chr5_3:5966507-5966526 None:intergenic 50.0%
AGGAAAGGCAGCATACCCTT+AGG + chr5_3:5966508-5966527 None:intergenic 50.0%
GGTATGCTGCCTTTCCTAGT+TGG - chr5_3:5966511-5966530 Msa0794140:intron 50.0%
! TCTTTTCTGCTGGCCCAACT+AGG + chr5_3:5966528-5966547 None:intergenic 50.0%
! AAGGCAGAGCTTTTGCCTGA+TGG - chr5_3:5966652-5966671 Msa0794140:five_prime_UTR 50.0%
! AGGCAGAGCTTTTGCCTGAT+GGG - chr5_3:5966653-5966672 Msa0794140:five_prime_UTR 50.0%
GGAGAAATGAAGGACTCGGA+CGG + chr5_3:5966681-5966700 None:intergenic 50.0%
TGGACGATGGTTCCTTTGCA+TGG + chr5_3:5966819-5966838 None:intergenic 50.0%
!! TACGAGTGTCGACGTGTCAG+AGG + chr5_3:5958678-5958697 None:intergenic 55.0%
TAGCTCAGCCTCCTAGCATC+TGG + chr5_3:5958934-5958953 None:intergenic 55.0%
! GAGAGCGGTCTTTTCTCTGC+AGG - chr5_3:5959516-5959535 Msa0794140:intron 55.0%
TGATAACTGTCGCTCAGGGG+AGG - chr5_3:5960135-5960154 Msa0794140:CDS 55.0%
TGCGACATCTGTGGAGATGC+TGG - chr5_3:5960883-5960902 Msa0794140:intron 55.0%
TGGCTCCTCCAGCTGCAAAA+AGG - chr5_3:5961388-5961407 Msa0794140:intron 55.0%
! GCTTGCCTTTTTGCAGCTGG+AGG + chr5_3:5961396-5961415 None:intergenic 55.0%
ATGCCTCCTCGTAACCACTC+TGG - chr5_3:5961531-5961550 Msa0794140:CDS 55.0%
TCACCACCAGAGTGGTTACG+AGG + chr5_3:5961540-5961559 None:intergenic 55.0%
GTGTGTCATCACCACCAGAG+TGG + chr5_3:5961548-5961567 None:intergenic 55.0%
! GATCTCCTTCCATTGGCCTC+CGG - chr5_3:5961577-5961596 Msa0794140:CDS 55.0%
! ATCTCCTTCCATTGGCCTCC+GGG - chr5_3:5961578-5961597 Msa0794140:CDS 55.0%
AATTTGACCCCGGAGGCCAA+TGG + chr5_3:5961589-5961608 None:intergenic 55.0%
CACCTGCTCGTATGACAAGC+AGG - chr5_3:5961928-5961947 Msa0794140:CDS 55.0%
GACCTGCTTGTCATACGAGC+AGG + chr5_3:5961933-5961952 None:intergenic 55.0%
GTCTAGGAATGACAGGCCTG+TGG - chr5_3:5962094-5962113 Msa0794140:CDS 55.0%
ACGCGCTTAACTTCCCATCC+TGG + chr5_3:5962223-5962242 None:intergenic 55.0%
TTGGAGCCTCAGGGTAGTTC+AGG - chr5_3:5962278-5962297 Msa0794140:CDS 55.0%
GTGTGTGTGTGTGTGTGTGG+GGG - chr5_3:5965257-5965276 Msa0794140:intron 55.0%
TGTGTGTGTGTGTGTGTGGG+GGG - chr5_3:5965258-5965277 Msa0794140:intron 55.0%
GCAAGAGAATACCCTCTGCC+AGG - chr5_3:5965571-5965590 Msa0794140:intron 55.0%
AGAAGGAATCGCCTGGCAGA+GGG + chr5_3:5965585-5965604 None:intergenic 55.0%
!! TGACTTGGAGGCACCTCTTC+AGG - chr5_3:5965997-5966016 Msa0794140:five_prime_UTR 55.0%
AGGAAGACCTGTCCGCTGAA+GGG - chr5_3:5966017-5966036 Msa0794140:five_prime_UTR 55.0%
CTGGTACTCAACCCCTTCAG+CGG + chr5_3:5966032-5966051 None:intergenic 55.0%
TCTGCTGGCCCAACTAGGAA+AGG + chr5_3:5966523-5966542 None:intergenic 55.0%
GCAGCAGCAACGTCATCTTC+TGG + chr5_3:5966571-5966590 None:intergenic 55.0%
! CGACGTGTCGGTGAGATGTC+TGG + chr5_3:5958635-5958654 None:intergenic 60.0%
CTGTGGAGATGCTGGTCGTG+AGG - chr5_3:5960891-5960910 Msa0794140:intron 60.0%
CCACCAGAGTGGTTACGAGG+AGG + chr5_3:5961537-5961556 None:intergenic 60.0%
CCTCCTCGTAACCACTCTGG+TGG - chr5_3:5961534-5961553 Msa0794140:CDS 60.0%
! TCTCCTTCCATTGGCCTCCG+GGG - chr5_3:5961579-5961598 Msa0794140:CDS 60.0%
CTTCTGATCGCCCTTGGGTG+TGG + chr5_3:5962135-5962154 None:intergenic 60.0%
!!! CTTTTTTGCGGGGGGTAGGG+TGG - chr5_3:5964320-5964339 Msa0794140:CDS 60.0%
GGGTGTATTTAGGGGGCGGA+GGG - chr5_3:5964511-5964530 Msa0794140:CDS 60.0%
GTGTGTGTGTGTGTGTGGGG+GGG - chr5_3:5965259-5965278 Msa0794140:intron 60.0%
TGTGTGTGTGTGTGTGGGGG+GGG - chr5_3:5965260-5965279 Msa0794140:intron 60.0%
CAGAAGGAATCGCCTGGCAG+AGG + chr5_3:5965586-5965605 None:intergenic 60.0%
GCGGACAGGTCTTCCTGAAG+AGG + chr5_3:5966013-5966032 None:intergenic 60.0%
CAGGAAGACCTGTCCGCTGA+AGG - chr5_3:5966016-5966035 Msa0794140:five_prime_UTR 60.0%
GGAAGACCTGTCCGCTGAAG+GGG - chr5_3:5966018-5966037 Msa0794140:five_prime_UTR 60.0%
ACTCAACCCCTTCAGCGGAC+AGG + chr5_3:5966027-5966046 None:intergenic 60.0%
CCATCGTTCCCAGGTCCTCA+CGG + chr5_3:5966321-5966340 None:intergenic 60.0%
AGGCAGCATACCCTTAGGGC+CGG + chr5_3:5966503-5966522 None:intergenic 60.0%
CCTTTGCATGGACCGCTGGA+AGG + chr5_3:5966807-5966826 None:intergenic 60.0%
CCTTCCAGCGGTCCATGCAA+AGG - chr5_3:5966804-5966823 Msa0794140:five_prime_UTR 60.0%
GGTTCCTTTGCATGGACCGC+TGG + chr5_3:5966811-5966830 None:intergenic 60.0%
GGCAGGGTTTCCTCTGTTCC+TGG - chr5_3:5967010-5967029 Msa0794140:five_prime_UTR 60.0%
TGACCCCGGAGGCCAATGGA+AGG + chr5_3:5961585-5961604 None:intergenic 65.0%
! TTTTGCGGGGGGTAGGGTGG+TGG - chr5_3:5964323-5964342 Msa0794140:CDS 65.0%
GGGGTGTATTTAGGGGGCGG+AGG - chr5_3:5964510-5964529 Msa0794140:CDS 65.0%
GGGCGGAGGGTCGATCATTC+TGG - chr5_3:5964524-5964543 Msa0794140:CDS 65.0%
GTGTGTGTGTGTGTGGGGGG+GGG - chr5_3:5965261-5965280 Msa0794140:intron 65.0%
TGTGTGTGTGTGTGGGGGGG+GGG - chr5_3:5965262-5965281 Msa0794140:intron 65.0%
CCGTGAGGACCTGGGAACGA+TGG - chr5_3:5966318-5966337 Msa0794140:intron 65.0%
CCTCCTTCTCCTCCTCCTGC+CGG - chr5_3:5966481-5966500 Msa0794140:intron 65.0%
ATACCCTTAGGGCCGGCAGG+AGG + chr5_3:5966496-5966515 None:intergenic 65.0%
AGCATACCCTTAGGGCCGGC+AGG + chr5_3:5966499-5966518 None:intergenic 65.0%
GTGTGTGTGTGTGGGGGGGG+GGG - chr5_3:5965263-5965282 Msa0794140:intron 70.0%
TGTGTGTGTGTGGGGGGGGG+GGG - chr5_3:5965264-5965283 Msa0794140:intron 70.0%
CCGGCAGGAGGAGGAGAAGG+AGG + chr5_3:5966484-5966503 None:intergenic 70.0%
TCCTCCTCCTGCCGGCCCTA+AGG - chr5_3:5966489-5966508 Msa0794140:intron 70.0%
CCTCCTCCTGCCGGCCCTAA+GGG - chr5_3:5966490-5966509 Msa0794140:intron 70.0%
GGACTCGGACGGTGCCCATC+AGG + chr5_3:5966670-5966689 None:intergenic 70.0%
GTGTGTGTGTGGGGGGGGGG+GGG - chr5_3:5965265-5965284 Msa0794140:intron 75.0%
TGTGTGTGTGGGGGGGGGGG+GGG - chr5_3:5965266-5965285 Msa0794140:intron 75.0%
GGGCCGGCAGGAGGAGGAGA+AGG + chr5_3:5966487-5966506 None:intergenic 75.0%
CCCTTAGGGCCGGCAGGAGG+AGG + chr5_3:5966493-5966512 None:intergenic 75.0%
! GTGTGTGTGGGGGGGGGGGG+GGG - chr5_3:5965267-5965286 Msa0794140:intron 80.0%
! TGTGTGTGGGGGGGGGGGGG+GGG - chr5_3:5965268-5965287 Msa0794140:intron 80.0%
! GTGTGTGGGGGGGGGGGGGG+GGG - chr5_3:5965269-5965288 Msa0794140:intron 85.0%
! TGTGTGGGGGGGGGGGGGGG+GGG - chr5_3:5965270-5965289 Msa0794140:intron 85.0%
! GTGTGGGGGGGGGGGGGGGG+GGG - chr5_3:5965271-5965290 Msa0794140:intron 90.0%
! TGTGGGGGGGGGGGGGGGGG+GGG - chr5_3:5965272-5965291 Msa0794140:intron 90.0%
! GTGGGGGGGGGGGGGGGGGG+GGG - chr5_3:5965273-5965292 Msa0794140:intron 95.0%
! TGGGGGGGGGGGGGGGGGGG+GGG - chr5_3:5965274-5965293 Msa0794140:intron 95.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 5957934 5967037 5957934 ID=Msa0794140;Name=Msa0794140
chr5_3 mRNA 5957934 5967037 5957934 ID=Msa0794140-mRNA-1;Parent=Msa0794140;Name=Msa0794140-mRNA-1;_AED=0.04;_eAED=0.04;_QI=538|1|1|1|0.81|0.75|12|308|1459
chr5_3 exon 5957934 5959516 5957934 ID=Msa0794140-mRNA-1:exon:2393;Parent=Msa0794140-mRNA-1
chr5_3 exon 5960094 5960485 5960094 ID=Msa0794140-mRNA-1:exon:2392;Parent=Msa0794140-mRNA-1
chr5_3 exon 5961191 5961315 5961191 ID=Msa0794140-mRNA-1:exon:2391;Parent=Msa0794140-mRNA-1
chr5_3 exon 5961420 5961650 5961420 ID=Msa0794140-mRNA-1:exon:2390;Parent=Msa0794140-mRNA-1
chr5_3 exon 5961759 5962449 5961759 ID=Msa0794140-mRNA-1:exon:2389;Parent=Msa0794140-mRNA-1
chr5_3 exon 5962672 5963166 5962672 ID=Msa0794140-mRNA-1:exon:2388;Parent=Msa0794140-mRNA-1
chr5_3 exon 5963356 5963661 5963356 ID=Msa0794140-mRNA-1:exon:2387;Parent=Msa0794140-mRNA-1
chr5_3 exon 5963820 5963914 5963820 ID=Msa0794140-mRNA-1:exon:2386;Parent=Msa0794140-mRNA-1
chr5_3 exon 5964012 5964097 5964012 ID=Msa0794140-mRNA-1:exon:2385;Parent=Msa0794140-mRNA-1
chr5_3 exon 5964242 5964987 5964242 ID=Msa0794140-mRNA-1:exon:2384;Parent=Msa0794140-mRNA-1
chr5_3 exon 5965969 5966058 5965969 ID=Msa0794140-mRNA-1:exon:2383;Parent=Msa0794140-mRNA-1
chr5_3 exon 5966652 5967037 5966652 ID=Msa0794140-mRNA-1:exon:2382;Parent=Msa0794140-mRNA-1
chr5_3 five_prime_UTR 5966652 5967037 5966652 ID=Msa0794140-mRNA-1:five_prime_utr;Parent=Msa0794140-mRNA-1
chr5_3 five_prime_UTR 5965969 5966058 5965969 ID=Msa0794140-mRNA-1:five_prime_utr;Parent=Msa0794140-mRNA-1
chr5_3 five_prime_UTR 5964926 5964987 5964926 ID=Msa0794140-mRNA-1:five_prime_utr;Parent=Msa0794140-mRNA-1
chr5_3 CDS 5964242 5964925 5964242 ID=Msa0794140-mRNA-1:cds;Parent=Msa0794140-mRNA-1
chr5_3 CDS 5964012 5964097 5964012 ID=Msa0794140-mRNA-1:cds;Parent=Msa0794140-mRNA-1
chr5_3 CDS 5963820 5963914 5963820 ID=Msa0794140-mRNA-1:cds;Parent=Msa0794140-mRNA-1
chr5_3 CDS 5963356 5963661 5963356 ID=Msa0794140-mRNA-1:cds;Parent=Msa0794140-mRNA-1
chr5_3 CDS 5962672 5963166 5962672 ID=Msa0794140-mRNA-1:cds;Parent=Msa0794140-mRNA-1
chr5_3 CDS 5961759 5962449 5961759 ID=Msa0794140-mRNA-1:cds;Parent=Msa0794140-mRNA-1
chr5_3 CDS 5961420 5961650 5961420 ID=Msa0794140-mRNA-1:cds;Parent=Msa0794140-mRNA-1
chr5_3 CDS 5961191 5961315 5961191 ID=Msa0794140-mRNA-1:cds;Parent=Msa0794140-mRNA-1
chr5_3 CDS 5960094 5960485 5960094 ID=Msa0794140-mRNA-1:cds;Parent=Msa0794140-mRNA-1
chr5_3 CDS 5958242 5959516 5958242 ID=Msa0794140-mRNA-1:cds;Parent=Msa0794140-mRNA-1
chr5_3 three_prime_UTR 5957934 5958241 5957934 ID=Msa0794140-mRNA-1:three_prime_utr;Parent=Msa0794140-mRNA-1
Gene Sequence

>Msa0794140

ATGAGGCTTGAATCAGGGACTTGTAATGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATGTTAACCATGCCCCTGAAGAGTTTTCTGATGATAACTGTCGCTCAGGGGAGGCTAATGTTCAGAATTCTATGAATGAGGGTAATGTATATTCTCTTAGTAGCCGAGCTTGTGAAAACTTGCAGCACGGTGTCAGTGAAACAAGTAATATGCTCAGTGTTAGTTCAAGTCACGATTCTCTATCTGAAAACGCGGAGAGTAGACAGATCTTGTTGAATAAGTATCAGGATCCCAACCATTTAGAAGGTCATGATGACAACACATCTTGTATTAGTAGAGCATCTGATGCTAATTCTCGTATACCAGAAAAAAATTCAAAATGCTCTATTGAGAATTGCAGTTCATCATTAACCAAAGAGAGTGCACCTGTTGCTACTTCTGGTGAGAAATGCACTGCAAATAAGGATAAATTTATTGAAGGCACTTCCAATGATTCGCTAAAAGTATGTCCAAAGTCACAAGCAGATCCTGATAATGATAAAGTATGTGATGCTAAAGTTGAAGACTGTAAATGTTCGGCCCATGATGGACATCATGAGAAAGCTGAAGAGCTGGTTAAATCACCTGGAAAGCAGGAATCTCAATCTGAAAATGAGAGTGATGAATCAGATGTTGTGGAACATGATGTGAAGGTATGCGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCTATATGCTGTAGGTGCACTGATGGTGCAGAGCACACCTACTGCATGCGAGAAATGCTTGAGAAACTCCCTGAAGGGGATTGGTTGTGTGAAGAATGCCAAGATGCAGTGGAAGCTGAAAAGAAGAGGCTGGACATTGAAGGGAAAAAAAACATTAAAACTACTTCCACGTCACAAGTTTCTGGCAAAAGACGTCCTGACAACATTGAAGTGGCTCCTCCAGCTGCAAAAAGGCAAGCTCTTGAATTAAGCAAAGGATCACCAAAGGTGTCAAGCCCTAAGAAATTGGTTCCACTATCACGAGAATCTTCATTTAAGAGCTCAGATAAATTAAAAGGGAAGTCTGGTCTTCTGATGCCTCCTCGTAACCACTCTGGTGGTGATGACACACAGACTGCTCGATCTCCTTCCATTGGCCTCCGGGGTCAAATTTCAAAAAGTACGTTGTTGAAGTCTAATTCATCCAACAACTTAAATTCCAAGCCGAAAGTCAAAATTGGTGATGAAGTTTTTCCACCAAGACCAAAAGGGGGTAATGAACAAACTTCTAAGAATATGGAGACACCTGCTCGTATGACAAGCAGGTCAACATTATTCAAATCCTCTAGTTTGGGCCGATCAAGTGCAATTGAATCAAAAGTTAAAATGCTACCTAAGCCTGCAACTATTCAGGACTTGAAAGGGTCTAGAAATTTAAAAGAATCAGGTTCGTTGGACCGAAAATATCTGTCTAGGAATGACAGGCCTGTGGCTAGTTCTGTTGTTTCCACACCCAAGGGCGATCAGAAGCTTACACCTCGGGGAGAAACCGTTATTAAGCCTTCAGCAGTTAATAATCGAGAGTCGAAGATAAACCAGGATGGGAAGTTAAGCGCGTCATCAAAATCAACGAACAATATAAGCCGTAAAAGTTTGGAGCCTCAGGGTAGTTCAGATAGAACAATAGCCTGTAATGATGAAGCTCTACAGGATGCGCTGCCTCGATCACGAGAGACAGCAAATCAGGTTGAGAAATCCAGAGAGAGTCTTAGTGATCGTTTAAGGCCAGTTGTTCCCACTGCATCAAAAAGTCCATACTGTCAAAAATGTGAGGAATTTGGCCATTCACTAGAAGGTTGCACAGCTGGTAATCTGCAAGAATCTGGTGCTGAAATATCTGTTACTGCCTCAAGTATCTCAAAAGAGGAGATGCATAAAGGCAATAAATTGAAAGCTGCAATACAGGCTGCTTTACTTAAAAGGCCTGAAATTTACAGGAAGAAAGAAGTATCTAGTCAAACCGATGAGATTCCTACATCAGGCACGGAGTTGAATTGTGAAGCAACTTCACGAGACCAAGTTTTGGTTTCTAACACACTTAAGAACAGTATATCTACTGAAGAAACTCGTGAACAACAGGAAGTCCTTGAGAATTCTACATCTGATTCTTCTAAATGTTCATCTGCCAGCGATTTGAAGCAACTTAACTCTTGTCCAACTGATCTTTGTTCACAACTAGGAAAGTCGGATTTAGTTGGTCTTAATGCTCAAAAGCCCTTAGTGAGAGACTTGTCTAGAAAAGCTGTGGCGATCTCAAGTGTTGTTTCGAAGATGCTGGCCTTTCCTGAATATGAATACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCAGAATTATGTACTGGAGTTCAAGCACATTTATCCTCTTCTGCATCTCCTAAGGTTCTTGAGGTAGTGACCAAGTTTAGTCCCGAAGTTTCCCTCAACGAAGTTTCACGCTTGAGTACATGGCCATCACAGTTCCATCATGGTGGTGCTAGAGAAGAAAATATTGCTCTTTACTTCTTTGCCAGGGATGTTGAAAGCTATGAGAGACACTACAAAGGTCTACTGGATCATATGATTAGAAATGATTTAGCACTTAAAGGAATTTTCGATGGTGTTGAACTTCTCATATTCCCATCCAATCAGCTTCCAGAAAATTCACAGCGCTGGAATATGTTGCTTTTCTTATGGGGTGTATTTAGGGGGCGGAGGGTCGATCATTCTGGTTCTGCAAAAAGTATCTGTATTCCAAGTTTGAATGCAATGCCAGTTGAGGAGAATTCTTCAACTGCTGTTGTGATTTTGTCTGAGCGTTGTTTGTCGAAGGGCATTGATGAAAAACCAATTAATTCCGACAAAGCAGGCAATACACTTCCTTCTTCAACTTCCCTAGATCAATCTCCAACTATAGTGAGTAACAATACTGATATCAATCACCAGACACAGTTGTGTTCACAACAAGTACCCTTAGAAATGTCAGATGGTACAATCGACAGCAAAACTGCATTCAGGGTTTCAAAAAGCTGTCAACAGACGAAATTTACTGGTTCTTCCCTGAAAGCTAGTGTAGTAGAGGATGAACGGTGCAGAGAGTCTAAACCTTCTGAAGAAATGGGAACAGGTGTGAGTAACAAGATGGTGGAAGCTAGTACTGATTCTGCTTCTTCTGAGAAGCAAGAGAATACCCTCTGCCAGGCGATTCCTTCTGTTAGCAATCAAGATAGAGATGCTGCCTGCAATATTAGTAAGAATGAAATTTTGGAGAGAATGAACTGTGATGAAGATCAGCAAAGGACCAAAAGGAAACAGAAAGAAGATTATCACTATATTGATTTGGAGGAAACAATTGACAATCATGAAACACATGCTGCAAGCAATATTGGTAAGGATAAAATTTCGGAAAGAATGAAAATTGATGAAGATCAGCAAAGGTCCAAGAGGAAACATGGAAATGGTCACTATATCGACTTGGAGGCAACTGTTGAAAATCAAGAAACAGATGCTGGAATCAATATAACTAAGGATAACATTTCAGAGAAAATAGGTGATCAAGATAAGCAACGGCTTAAGAGGAAAGCAAAAGAAGATTGTCACTATATTGACTTGGAGGCACCTCTTCAGGAAGACCTGTCCGCTGAAGGGGTTGAGTACCAGCTACCCAATGATAAAGAAGTTCATCATGTTGATCTATCAGTGGCTGGTTTACAGAAAATGCCTTGGAATGAGGTAAATGGAAAATTAGAAGATGCAGAAAGTTCCAGAAAGAAGCCGAGGACAAGTTTTGGCGAGATTTATGATCGTCACAGTTCTGGAGGTAGTCTCTCCTTTAATGACAGTTTGACATCTCTTGGAAATGATATTGGTTCCCGTTCTTCAGTTGGAGACAAAAGATGTGAAGAAGCTTCCGTTGAAAAAATCATCCGTGAGGACCTGGGAACGATGGAAAGAACCTTCTTTCCTGTTGATACTCAGAATATCAATGGCTCGCAATCGGTGCTGAATACTATGGCAATGAAAGGGATTCATGAGCGCGAGAATGTGATTCCAAATCTAAATCTTGCTTTAGGGGATGAAACAGAAACGCCTCCTTCTCCTCCTCCTGCCGGCCCTAAGGGTATGCTGCCTTTCCTAGTTGGGCCAGCAGAAAAGAAAAATAACCATGCAAATAGGCCAGAAGATGACGTTGCTGCTGCATCTCTGTCCCTTTCTCTATCGTTTCCATCTTCAAACATGGAACAAACAAAAGCTTCTTCAAAGGCAGAGCTTTTGCCTGATGGGCACCGTCCGAGTCCTTCATTTCTCCTTTTTGGGAGGAGATACACAGACAAATAA
Protein sequence

>Msa0794140

MRLESGTCNVCSAPCSSCMHVNHAPEEFSDDNCRSGEANVQNSMNEGNVYSLSSRACENLQHGVSETSNMLSVSSSHDSLSENAESRQILLNKYQDPNHLEGHDDNTSCISRASDANSRIPEKNSKCSIENCSSSLTKESAPVATSGEKCTANKDKFIEGTSNDSLKVCPKSQADPDNDKVCDAKVEDCKCSAHDGHHEKAEELVKSPGKQESQSENESDESDVVEHDVKVCDICGDAGREDLLAICCRCTDGAEHTYCMREMLEKLPEGDWLCEECQDAVEAEKKRLDIEGKKNIKTTSTSQVSGKRRPDNIEVAPPAAKRQALELSKGSPKVSSPKKLVPLSRESSFKSSDKLKGKSGLLMPPRNHSGGDDTQTARSPSIGLRGQISKSTLLKSNSSNNLNSKPKVKIGDEVFPPRPKGGNEQTSKNMETPARMTSRSTLFKSSSLGRSSAIESKVKMLPKPATIQDLKGSRNLKESGSLDRKYLSRNDRPVASSVVSTPKGDQKLTPRGETVIKPSAVNNRESKINQDGKLSASSKSTNNISRKSLEPQGSSDRTIACNDEALQDALPRSRETANQVEKSRESLSDRLRPVVPTASKSPYCQKCEEFGHSLEGCTAGNLQESGAEISVTASSISKEEMHKGNKLKAAIQAALLKRPEIYRKKEVSSQTDEIPTSGTELNCEATSRDQVLVSNTLKNSISTEETREQQEVLENSTSDSSKCSSASDLKQLNSCPTDLCSQLGKSDLVGLNAQKPLVRDLSRKAVAISSVVSKMLAFPEYEYIWQGVFEVHRNGKPPELCTGVQAHLSSSASPKVLEVVTKFSPEVSLNEVSRLSTWPSQFHHGGAREENIALYFFARDVESYERHYKGLLDHMIRNDLALKGIFDGVELLIFPSNQLPENSQRWNMLLFLWGVFRGRRVDHSGSAKSICIPSLNAMPVEENSSTAVVILSERCLSKGIDEKPINSDKAGNTLPSSTSLDQSPTIVSNNTDINHQTQLCSQQVPLEMSDGTIDSKTAFRVSKSCQQTKFTGSSLKASVVEDERCRESKPSEEMGTGVSNKMVEASTDSASSEKQENTLCQAIPSVSNQDRDAACNISKNEILERMNCDEDQQRTKRKQKEDYHYIDLEETIDNHETHAASNIGKDKISERMKIDEDQQRSKRKHGNGHYIDLEATVENQETDAGINITKDNISEKIGDQDKQRLKRKAKEDCHYIDLEAPLQEDLSAEGVEYQLPNDKEVHHVDLSVAGLQKMPWNEVNGKLEDAESSRKKPRTSFGEIYDRHSSGGSLSFNDSLTSLGNDIGSRSSVGDKRCEEASVEKIIREDLGTMERTFFPVDTQNINGSQSVLNTMAMKGIHERENVIPNLNLALGDETETPPSPPPAGPKGMLPFLVGPAEKKNNHANRPEDDVAAASLSLSLSFPSSNMEQTKASSKAELLPDGHRPSPSFLLFGRRYTDK*