Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584890 | XP_013455470.1 | 97.245 | 871 | 23 | 1 | 1 | 871 | 1 | 870 | 0.0 | 1766 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584890 | sp|Q9UMN6|KMT2B_HUMAN | 32.727 | 220 | 122 | 9 | 141 | 353 | 1202 | 1402 | 5.27e-28 | 126 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584890 | A0A072UJ97 | 97.245 | 871 | 23 | 1 | 1 | 871 | 1 | 870 | 0.0 | 1766 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0584890 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0584710 | Msa0584890 | 0.987579 | 9.023179e-171 | -8.615850e-47 |
| Msa0584890 | Msa0794140 | 0.830347 | 3.090422e-55 | -8.615850e-47 |
| Msa0584890 | Msa1102790 | 0.807816 | 4.202294e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584890 | MtrunA17_Chr4g0019381 | 97.245 | 871 | 23 | 1 | 1 | 871 | 1 | 870 | 0.0 | 1766 |
| Msa0584890 | MtrunA17_Chr7g0275611 | 38.571 | 70 | 40 | 1 | 268 | 337 | 339 | 405 | 4.20e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584890 | AT3G08020.1 | 50.225 | 890 | 313 | 19 | 1 | 871 | 1 | 779 | 0.0 | 777 |
| Msa0584890 | AT3G52100.3 | 61.358 | 383 | 132 | 7 | 1 | 375 | 1 | 375 | 4.11e-159 | 481 |
| Msa0584890 | AT3G52100.3 | 44.279 | 201 | 81 | 5 | 681 | 871 | 499 | 678 | 1.80e-32 | 135 |
| Msa0584890 | AT3G52100.2 | 61.358 | 383 | 132 | 7 | 1 | 375 | 1 | 375 | 1.39e-158 | 479 |
| Msa0584890 | AT3G52100.2 | 38.961 | 154 | 65 | 4 | 681 | 826 | 499 | 631 | 3.38e-17 | 86.7 |
| Msa0584890 | AT3G52100.1 | 59.343 | 396 | 137 | 8 | 1 | 375 | 1 | 393 | 8.69e-157 | 476 |
| Msa0584890 | AT3G52100.1 | 44.279 | 201 | 81 | 5 | 681 | 871 | 517 | 696 | 2.30e-32 | 135 |
| Msa0584890 | AT3G52100.4 | 66.323 | 291 | 92 | 2 | 85 | 375 | 4 | 288 | 1.43e-135 | 417 |
| Msa0584890 | AT3G52100.4 | 44.279 | 201 | 81 | 5 | 681 | 871 | 412 | 591 | 1.12e-32 | 135 |
Find 235 sgRNAs with CRISPR-Local
Find 585 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATAAGTTGGTTATAAATT+TGG | 0.123019 | 4_2:+5102377 | Msa0584890:CDS |
| AAGCAATAAGGCAAATATTT+TGG | 0.136146 | 4_2:+5102305 | Msa0584890:CDS |
| AACAATGATCTTTCTTTAAA+AGG | 0.142690 | 4_2:-5103535 | None:intergenic |
| TGAAATTCATAGGTGGTTTC+TGG | 0.171456 | 4_2:+5099832 | Msa0584890:intron |
| CATCTTGGTAGGTGAATTAT+TGG | 0.205189 | 4_2:-5101971 | None:intergenic |
| TGTGACACTTTGTGTGTTTC+GGG | 0.231030 | 4_2:-5099213 | None:intergenic |
| CTGTGACACTTTGTGTGTTT+CGG | 0.235922 | 4_2:-5099214 | None:intergenic |
| AATAAGTTGGTTATAAATTT+GGG | 0.260701 | 4_2:+5102378 | Msa0584890:CDS |
| AAGAAGCATTACCATGTAAT+TGG | 0.262907 | 4_2:-5096598 | None:intergenic |
| AGCATCACGCTTAGCTTTCA+TGG | 0.266381 | 4_2:-5096987 | None:intergenic |
| ATCAGACATCCGATGATTCT+TGG | 0.268452 | 4_2:+5103710 | Msa0584890:CDS |
| GATTCCCATCCACTTGAAAT+TGG | 0.272368 | 4_2:-5101606 | None:intergenic |
| TCTAAATCTCAAACAACTTA+TGG | 0.278489 | 4_2:+5096558 | Msa0584890:exon |
| CCTACCAAGATGAATGATTA+TGG | 0.283895 | 4_2:+5101982 | Msa0584890:CDS |
| CCGCTAACAGCAACAATTTC+CGG | 0.284119 | 4_2:-5096923 | None:intergenic |
| GATACATCTGGAAATCTTAA+TGG | 0.299430 | 4_2:+5097875 | Msa0584890:CDS |
| AGTAAAGGTTTAGAATCTTT+TGG | 0.304805 | 4_2:-5103412 | None:intergenic |
| TTTGGGTAAGCATTCTCTAT+TGG | 0.306016 | 4_2:+5104451 | Msa0584890:three_prime_UTR |
| CATGGAATGATCAACCAAAT+TGG | 0.307065 | 4_2:+5103277 | Msa0584890:CDS |
| AGGCCAATCAAAACATATAA+AGG | 0.311363 | 4_2:+5103102 | Msa0584890:CDS |
| TTTGCAGAACATGAACTTAC+TGG | 0.319396 | 4_2:-5099037 | None:intergenic |
| TAACCAGATCTTGATCTCTT+TGG | 0.321987 | 4_2:-5102452 | None:intergenic |
| CTATCCTCATCGTCAGAATA+TGG | 0.325229 | 4_2:-5101889 | None:intergenic |
| ACGTTGCACCTAATCCAATT+TGG | 0.326147 | 4_2:-5103291 | None:intergenic |
| GGCGGCGGTGGCACCACTTT+CGG | 0.327840 | 4_2:-5096899 | None:intergenic |
| AAGAGGTGAAAGGACATATT+TGG | 0.331287 | 4_2:+5103315 | Msa0584890:CDS |
| ATTGCCAGTGTGATGATATT+AGG | 0.335400 | 4_2:+5100441 | Msa0584890:CDS |
| AGAATTTGTTTCTGTTCGTT+AGG | 0.339995 | 4_2:+5096752 | Msa0584890:CDS |
| AGGATGCTGTTCAAGAGCTT+TGG | 0.345011 | 4_2:+5101776 | Msa0584890:CDS |
| TCAGGAAATAGGGTTGATTC+AGG | 0.345145 | 4_2:+5103082 | Msa0584890:intron |
| TGTGTGTTTCGGGCACAAAT+AGG | 0.350257 | 4_2:-5099203 | None:intergenic |
| CACTATGTCCTTCAAAACTA+TGG | 0.351617 | 4_2:-5102080 | None:intergenic |
| ACTTGTTTCCCTTCGTCAAA+TGG | 0.359111 | 4_2:-5102886 | None:intergenic |
| TGTTCGAATTAAAAGCAATA+AGG | 0.361567 | 4_2:+5102293 | Msa0584890:CDS |
| AATCCCAAGGGTGGATAACT+TGG | 0.366338 | 4_2:-5104283 | None:intergenic |
| TATCTTGGAACTCAGGAAAC+AGG | 0.372451 | 4_2:+5104214 | Msa0584890:CDS |
| TCAAAACATATAAAGGTTTA+CGG | 0.372730 | 4_2:+5103109 | Msa0584890:CDS |
| GTGTGTTTCGGGCACAAATA+GGG | 0.377093 | 4_2:-5099202 | None:intergenic |
| TCAAGGGCCAGAGGTCAAAA+AGG | 0.379966 | 4_2:+5103500 | Msa0584890:CDS |
| CTTGTTTCCCTTCGTCAAAT+GGG | 0.387298 | 4_2:-5102885 | None:intergenic |
| GGGTGAAGTTGGTCCTTTAG+AGG | 0.394114 | 4_2:+5103222 | Msa0584890:CDS |
| ATGATCAACCAAATTGGATT+AGG | 0.395130 | 4_2:+5103283 | Msa0584890:CDS |
| CCGTTATTACCTCACAAATT+CGG | 0.395579 | 4_2:-5098169 | None:intergenic |
| TTGTCGTGGGGAATGTTATC+AGG | 0.399762 | 4_2:+5101648 | Msa0584890:CDS |
| TATTAGATCTTTACATAGCT+TGG | 0.401339 | 4_2:+5102104 | Msa0584890:CDS |
| GAAATTCATAGGTGGTTTCT+GGG | 0.406049 | 4_2:+5099833 | Msa0584890:intron |
| GCAGGTGATGAATAAATATC+AGG | 0.409921 | 4_2:-5102156 | None:intergenic |
| AAATCTTAATGGAGAAGAAC+AGG | 0.411719 | 4_2:+5097886 | Msa0584890:CDS |
| AATGGTGGCCTGTACATAAC+AGG | 0.414825 | 4_2:-5104615 | None:intergenic |
| AAAATCCCTGTCTGATTGAC+AGG | 0.418712 | 4_2:-5102213 | None:intergenic |
| ATCGTCAGAATATGGTGAAA+TGG | 0.420114 | 4_2:-5101881 | None:intergenic |
| ATGAGAACATGGATGCAAAC+TGG | 0.421404 | 4_2:+5103638 | Msa0584890:CDS |
| GAAAATATTTCTTCTTGTGT+TGG | 0.421725 | 4_2:-5101859 | None:intergenic |
| TAGAAGATTATTCATCTTTG+AGG | 0.426786 | 4_2:+5104380 | Msa0584890:three_prime_UTR |
| ATTTATTCATCACCTGCTAC+TGG | 0.429638 | 4_2:+5102162 | Msa0584890:CDS |
| CCGGAAATTGTTGCTGTTAG+CGG | 0.434395 | 4_2:+5096923 | Msa0584890:CDS |
| CGAAAGTCAAAATTCTCATC+AGG | 0.436722 | 4_2:+5103459 | Msa0584890:CDS |
| GGCCACCATTACTGTAGAAT+AGG | 0.438982 | 4_2:+5104628 | Msa0584890:three_prime_UTR |
| ATGCTGTTCAAGAGCTTTGG+AGG | 0.441727 | 4_2:+5101779 | Msa0584890:CDS |
| GAATATAAATTTCACTAAAG+AGG | 0.442220 | 4_2:-5104403 | None:intergenic |
| ACCGGTACCTTCAGACAAAC+AGG | 0.442785 | 4_2:-5099908 | None:intergenic |
| AAGATCCTGCAGTTCAGAAA+AGG | 0.445263 | 4_2:-5104520 | None:intergenic |
| GAATCATTCTTTAACTTCAA+AGG | 0.447866 | 4_2:-5101916 | None:intergenic |
| ATTTATTTCATTGGAGTTCG+TGG | 0.447943 | 4_2:+5098132 | Msa0584890:CDS |
| ATAGGAGCTGCTTGAAAAGT+TGG | 0.450677 | 4_2:+5098017 | Msa0584890:CDS |
| CTACATGTTACTTACGATGA+TGG | 0.452765 | 4_2:+5104182 | Msa0584890:CDS |
| ATCTTGGTAGGTGAATTATT+GGG | 0.454003 | 4_2:-5101970 | None:intergenic |
| ATTGTTGCTGTTAGCGGTGG+TGG | 0.455700 | 4_2:+5096929 | Msa0584890:CDS |
| GAATTTGTTTCTGTTCGTTA+GGG | 0.455855 | 4_2:+5096753 | Msa0584890:CDS |
| TTTCCCTTCGTCAAATGGGC+TGG | 0.455866 | 4_2:-5102881 | None:intergenic |
| ACAATTTCCGGCGGCGGCGG+TGG | 0.459269 | 4_2:-5096911 | None:intergenic |
| GTTAGCGGTGGTGGTGGTGG+TGG | 0.459911 | 4_2:+5096938 | Msa0584890:CDS |
| TATCACCAATTTCAAGTGGA+TGG | 0.460018 | 4_2:+5101601 | Msa0584890:CDS |
| TATTCTGACGATGAGGATAG+TGG | 0.460236 | 4_2:+5101892 | Msa0584890:CDS |
| TATGCTAGGAGGCTTGAATC+TGG | 0.462814 | 4_2:+5097052 | Msa0584890:CDS |
| GGTGAAGTTGGTCCTTTAGA+GGG | 0.464502 | 4_2:+5103223 | Msa0584890:CDS |
| TGACTCAAGCTTCCAGTAGC+AGG | 0.469535 | 4_2:-5102174 | None:intergenic |
| TCTGAATTCAACTTCACCTC+TGG | 0.469813 | 4_2:+5103178 | Msa0584890:CDS |
| CTTTCCATAATCATTCATCT+TGG | 0.470156 | 4_2:-5101986 | None:intergenic |
| GATACAGACTCTACCTTATG+AGG | 0.470210 | 4_2:-5099099 | None:intergenic |
| GCTGTTAGCGGTGGTGGTGG+TGG | 0.472919 | 4_2:+5096935 | Msa0584890:CDS |
| TGACCTCTGGCCCTTGATTG+TGG | 0.479701 | 4_2:-5103494 | None:intergenic |
| TTAGCCGCCCAGATTGCTGC+TGG | 0.483510 | 4_2:+5104426 | Msa0584890:three_prime_UTR |
| GATAGCCACGATGGAGCAGC+TGG | 0.484593 | 4_2:+5102917 | Msa0584890:CDS |
| GATCTTTCTTTAAAAGGTGA+AGG | 0.485940 | 4_2:-5103529 | None:intergenic |
| CTGTCTGCAACCTCCTCATA+AGG | 0.486512 | 4_2:+5099086 | Msa0584890:CDS |
| TCTTGTCCTGTCAATCAGAC+AGG | 0.488284 | 4_2:+5102207 | Msa0584890:CDS |
| GCCACCATTACTGTAGAATA+GGG | 0.489777 | 4_2:+5104629 | Msa0584890:three_prime_UTR |
| AGATCCTGCAGTTCAGAAAA+GGG | 0.491809 | 4_2:-5104519 | None:intergenic |
| TGATGGAAAAGTGAGTATCT+TGG | 0.491862 | 4_2:+5104199 | Msa0584890:CDS |
| GAAGGAAACACAATCAAGTT+CGG | 0.494374 | 4_2:+5103136 | Msa0584890:CDS |
| TGCAGTTCAGAAAAGGGCTT+CGG | 0.494500 | 4_2:-5104513 | None:intergenic |
| ACAAATTCGGCAAGCACGGC+AGG | 0.495002 | 4_2:-5098156 | None:intergenic |
| ACGTTGCTTGTCCAATTACA+TGG | 0.496718 | 4_2:+5096587 | Msa0584890:CDS |
| ATAATGCAGAATGTTAGTAC+TGG | 0.497183 | 4_2:+5099178 | Msa0584890:intron |
| AGAGGAGAAGACCACAATCA+AGG | 0.497579 | 4_2:+5103483 | Msa0584890:CDS |
| AAACCCAAGTTATCCACCCT+TGG | 0.498225 | 4_2:+5104279 | Msa0584890:exon |
| GGGTTTCCGCGTTCTCTGAA+CGG | 0.498481 | 4_2:+5096773 | Msa0584890:CDS |
| CGTGATGCTCTTCAGAGAAA+AGG | 0.498878 | 4_2:+5097001 | Msa0584890:CDS |
| TGAAGGTAAAGAAAGATCAT+TGG | 0.499874 | 4_2:+5103567 | Msa0584890:CDS |
| AAAAGTTGGTCTAATAATAG+AGG | 0.500565 | 4_2:+5098031 | Msa0584890:CDS |
| AACCCAAGTTATCCACCCTT+GGG | 0.501512 | 4_2:+5104280 | Msa0584890:exon |
| TACTTTGTGAAATCAGATAC+AGG | 0.501546 | 4_2:-5104584 | None:intergenic |
| GTAAGTAACATGTAGATTTG+AGG | 0.501844 | 4_2:-5104174 | None:intergenic |
| GGAGCAGCTGGACATATTGA+TGG | 0.502263 | 4_2:+5102929 | Msa0584890:CDS |
| GTTGTAGTAAGAAGTACCAT+AGG | 0.505771 | 4_2:+5097999 | Msa0584890:CDS |
| GAAGGTGCAAGTCAATCTCC+TGG | 0.506230 | 4_2:+5103601 | Msa0584890:CDS |
| GATTTCTGCCTGTTATGTAC+AGG | 0.507013 | 4_2:+5104607 | Msa0584890:three_prime_UTR |
| AAGATTTAATTACCAGCTTG+AGG | 0.507382 | 4_2:+5101821 | Msa0584890:CDS |
| AGGCACAAGGGAGAGGTGAC+TGG | 0.507871 | 4_2:+5104137 | Msa0584890:intron |
| TTGCAGAACATGAACTTACT+GGG | 0.510009 | 4_2:-5099036 | None:intergenic |
| TCATGATTTATATTCTCTCC+AGG | 0.512210 | 4_2:-5103619 | None:intergenic |
| TGCTGCTATGATTGCTGCTG+AGG | 0.512543 | 4_2:+5097027 | Msa0584890:CDS |
| ATGCAATCTCAGAGAAATGA+AGG | 0.514018 | 4_2:+5102132 | Msa0584890:CDS |
| GAGGAGAAGACCACAATCAA+GGG | 0.514194 | 4_2:+5103484 | Msa0584890:CDS |
| GCAACAATTTCCGGCGGCGG+CGG | 0.514824 | 4_2:-5096914 | None:intergenic |
| AGATTTAATTACCAGCTTGA+GGG | 0.515066 | 4_2:+5101822 | Msa0584890:CDS |
| CCCTCCCTATTCTACAGTAA+TGG | 0.515133 | 4_2:-5104633 | None:intergenic |
| ACCAGCTTGAGGGCTGCAGC+TGG | 0.516002 | 4_2:+5101832 | Msa0584890:CDS |
| AAGTTGAATTCAGAAACATT+TGG | 0.516357 | 4_2:-5103169 | None:intergenic |
| CGGGGAAAACGTAGTACTCA+TGG | 0.516403 | 4_2:+5103259 | Msa0584890:CDS |
| GCTGTGATCATTGCCAACGC+TGG | 0.517113 | 4_2:+5100414 | Msa0584890:CDS |
| TTCAACTTCACCTCTGGTAG+AGG | 0.517716 | 4_2:+5103184 | Msa0584890:CDS |
| TTTGTCCAGGCACAAGGGAG+AGG | 0.519232 | 4_2:+5104130 | Msa0584890:intron |
| CAAGATCTGGTTACTGCCAA+TGG | 0.520282 | 4_2:+5102462 | Msa0584890:CDS |
| AGTGGTGCCACCGCCGCCGC+CGG | 0.520952 | 4_2:+5096904 | Msa0584890:CDS |
| ATCTAGGCTTGCAGAAGGAC+CGG | 0.522269 | 4_2:+5099009 | Msa0584890:intron |
| TCAAAATTCTCATCAGGAAG+AGG | 0.522988 | 4_2:+5103465 | Msa0584890:CDS |
| CCATAATCATTCATCTTGGT+AGG | 0.524350 | 4_2:-5101982 | None:intergenic |
| TCGACAAAAGACCTTTACAT+TGG | 0.526937 | 4_2:-5097915 | None:intergenic |
| AGTTGCGCATCCAATGTCCC+TGG | 0.528835 | 4_2:+5099235 | Msa0584890:CDS |
| GACTCTCTGTCATTCATGAC+GGG | 0.532056 | 4_2:+5102042 | Msa0584890:CDS |
| TGGTTATAAATTTGGGAGCA+CGG | 0.533503 | 4_2:+5102385 | Msa0584890:CDS |
| AATAGGGAGGGATGTGCCCT+AGG | 0.537130 | 4_2:+5104645 | Msa0584890:three_prime_UTR |
| ACAGCAACAATTTCCGGCGG+CGG | 0.541618 | 4_2:-5096917 | None:intergenic |
| AAGTGAGTATCTTGGAACTC+AGG | 0.543351 | 4_2:+5104207 | Msa0584890:CDS |
| GCATCCAATGTCCCTGGGAA+TGG | 0.543385 | 4_2:+5099241 | Msa0584890:CDS |
| CAATGATCACAGCAAACCAT+TGG | 0.548899 | 4_2:-5100404 | None:intergenic |
| TCAAGTTGCGGTGCCGAAAG+TGG | 0.549626 | 4_2:+5096886 | Msa0584890:CDS |
| GCTGGACATATTGATGGTAA+AGG | 0.550993 | 4_2:+5102935 | Msa0584890:CDS |
| ACCAGCTGCAGCCCTCAAGC+TGG | 0.551122 | 4_2:-5101833 | None:intergenic |
| TGATGGTCAGTGATGAAGAA+AGG | 0.551814 | 4_2:+5102259 | Msa0584890:CDS |
| ATCACCAATTTCAAGTGGAT+GGG | 0.551981 | 4_2:+5101602 | Msa0584890:CDS |
| ATGATGTGAGATCCCTCTAA+AGG | 0.552018 | 4_2:-5103235 | None:intergenic |
| GAGGTGACTGGTGTAGTTGA+AGG | 0.554422 | 4_2:+5104149 | Msa0584890:CDS |
| GTAGAGGCAATATGTCGGAT+GGG | 0.555682 | 4_2:+5103200 | Msa0584890:CDS |
| GAAACGTAAGTTTAATGATG+AGG | 0.555914 | 4_2:+5102236 | Msa0584890:CDS |
| AAATTGGGAAGTGATGCAAT+TGG | 0.556017 | 4_2:+5103670 | Msa0584890:CDS |
| CTGTGATCATTGCCAACGCT+GGG | 0.558570 | 4_2:+5100415 | Msa0584890:CDS |
| GGTGATTCACGGAAGGAAGA+TGG | 0.559126 | 4_2:+5096854 | Msa0584890:CDS |
| CGTCCAAAGAGATCAAGATC+TGG | 0.559890 | 4_2:+5102449 | Msa0584890:CDS |
| GTGGAAGATTGTTTGTGAAA+GGG | 0.560028 | 4_2:+5099876 | Msa0584890:CDS |
| TGTGGAAGATTGTTTGTGAA+AGG | 0.560702 | 4_2:+5099875 | Msa0584890:CDS |
| AAGGCGACGTCGTGGAGATG+AGG | 0.560893 | 4_2:-5096349 | None:intergenic |
| TAAGTTTAATGATGAGGTGA+TGG | 0.563351 | 4_2:+5102242 | Msa0584890:CDS |
| CCTCACAAATTCGGCAAGCA+CGG | 0.563825 | 4_2:-5098160 | None:intergenic |
| TAGTCCATTCCCAGGGACAT+TGG | 0.565083 | 4_2:-5099245 | None:intergenic |
| GGATTAGGTGCAACGTCAAG+AGG | 0.566722 | 4_2:+5103298 | Msa0584890:CDS |
| CGGAACGAAGAACGCGACGA+AGG | 0.567316 | 4_2:+5096793 | Msa0584890:CDS |
| ATAAAGGTTTACGGAAGAGA+AGG | 0.568268 | 4_2:+5103118 | Msa0584890:CDS |
| GGTAGAGGCAATATGTCGGA+TGG | 0.568298 | 4_2:+5103199 | Msa0584890:CDS |
| CTCACGCTTAGTCCATTCCC+AGG | 0.568843 | 4_2:-5099253 | None:intergenic |
| AATGTGAAGGCATGTGATTA+TGG | 0.569243 | 4_2:-5103384 | None:intergenic |
| GCTTGAATCTGGCGATGTTG+TGG | 0.569400 | 4_2:+5097063 | Msa0584890:CDS |
| AGAGGGATCTCACATCATGC+GGG | 0.569444 | 4_2:+5103240 | Msa0584890:CDS |
| TAATCATACATCTAACACCT+AGG | 0.570429 | 4_2:-5104662 | None:intergenic |
| TTACTGTCCTGTTTGTCTGA+AGG | 0.571885 | 4_2:+5099901 | Msa0584890:CDS |
| TCCCTATTCTACAGTAATGG+TGG | 0.572052 | 4_2:-5104630 | None:intergenic |
| ACAGGGGCAATCCAATGTAA+AGG | 0.572393 | 4_2:+5097904 | Msa0584890:CDS |
| GAAAACGTGGTGATAAGTCT+CGG | 0.578542 | 4_2:+5102343 | Msa0584890:CDS |
| TATACATGTCCTACTTGTCG+TGG | 0.579175 | 4_2:+5101634 | Msa0584890:CDS |
| CATGAACTTACTGGGATCAC+CGG | 0.580670 | 4_2:-5099028 | None:intergenic |
| AAGATATCACCAATTTCAAG+TGG | 0.584262 | 4_2:+5101597 | Msa0584890:CDS |
| GTTGCTGTTAGCGGTGGTGG+TGG | 0.584403 | 4_2:+5096932 | Msa0584890:CDS |
| TAGAGGCAATATGTCGGATG+GGG | 0.586954 | 4_2:+5103201 | Msa0584890:CDS |
| ACTGGCAATGTACCCAGCGT+TGG | 0.587950 | 4_2:-5100427 | None:intergenic |
| AAAGTGCTGTAAGTAAGTAA+AGG | 0.590140 | 4_2:-5096368 | None:intergenic |
| GGACTCTCTGTCATTCATGA+CGG | 0.591165 | 4_2:+5102041 | Msa0584890:CDS |
| TGGTGGAACGATTCAAGTTG+CGG | 0.592724 | 4_2:+5096874 | Msa0584890:CDS |
| ATACATGTCCTACTTGTCGT+GGG | 0.593049 | 4_2:+5101635 | Msa0584890:CDS |
| ATCCCAAGGGTGGATAACTT+GGG | 0.593144 | 4_2:-5104282 | None:intergenic |
| TAATGCAGAATGTTAGTACT+GGG | 0.600736 | 4_2:+5099179 | Msa0584890:intron |
| GAATATAAATCATGAGAACA+TGG | 0.604777 | 4_2:+5103627 | Msa0584890:CDS |
| AGTAAGTAAAGGCGACGTCG+TGG | 0.605476 | 4_2:-5096357 | None:intergenic |
| TTGCAGACAGTAACAATGGT+AGG | 0.606220 | 4_2:-5099073 | None:intergenic |
| GCTTCATCTAGGCTTGCAGA+AGG | 0.606594 | 4_2:+5099004 | Msa0584890:intron |
| GTTGCGCATCCAATGTCCCT+GGG | 0.607039 | 4_2:+5099236 | Msa0584890:CDS |
| AATCCAGCCCATTTGACGAA+GGG | 0.608149 | 4_2:+5102878 | Msa0584890:CDS |
| ATTCTGACGATGAGGATAGT+GGG | 0.608708 | 4_2:+5101893 | Msa0584890:CDS |
| CTTGTCCTGTCAATCAGACA+GGG | 0.609494 | 4_2:+5102208 | Msa0584890:CDS |
| AGATTCAGAGTCAACACCAA+TGG | 0.610286 | 4_2:+5100388 | Msa0584890:CDS |
| AGGCACTAACCAAGAATCAT+CGG | 0.613042 | 4_2:-5103719 | None:intergenic |
| ATCTTGGAACTCAGGAAACA+GGG | 0.617076 | 4_2:+5104215 | Msa0584890:CDS |
| GAAATTGTTGCTGTTAGCGG+TGG | 0.617826 | 4_2:+5096926 | Msa0584890:CDS |
| TAGAGGGATCTCACATCATG+CGG | 0.619845 | 4_2:+5103239 | Msa0584890:CDS |
| TGCAATCGTGTCGAGAACGA+AGG | 0.621522 | 4_2:+5097941 | Msa0584890:CDS |
| AATCATACATCTAACACCTA+GGG | 0.621983 | 4_2:-5104661 | None:intergenic |
| ATGTTCTGCAAAAGATGTGA+TGG | 0.623740 | 4_2:+5099048 | Msa0584890:CDS |
| TTGCTGCTGAGGAGTATGCT+AGG | 0.624374 | 4_2:+5097038 | Msa0584890:CDS |
| GCATAAAACAATCCCAAGGG+TGG | 0.626571 | 4_2:-5104292 | None:intergenic |
| TTCACCATATTCTGACGATG+AGG | 0.627848 | 4_2:+5101885 | Msa0584890:CDS |
| GTTCCAGGTCAAGAATCTTG+AGG | 0.629657 | 4_2:+5101756 | Msa0584890:intron |
| TATTTGGCGAAGCAGTCAGA+AGG | 0.629884 | 4_2:+5103331 | Msa0584890:CDS |
| TAACATTCCCCACGACAAGT+AGG | 0.631142 | 4_2:-5101643 | None:intergenic |
| AGAGGCAATATGTCGGATGG+GGG | 0.631575 | 4_2:+5103202 | Msa0584890:CDS |
| ACCATTACTGTAGAATAGGG+AGG | 0.631734 | 4_2:+5104632 | Msa0584890:three_prime_UTR |
| AATCTTAATGGAGAAGAACA+GGG | 0.634774 | 4_2:+5097887 | Msa0584890:CDS |
| CTCTGGTAGAGGCAATATGT+CGG | 0.634821 | 4_2:+5103195 | Msa0584890:CDS |
| CCGTGCTTGCCGAATTTGTG+AGG | 0.635864 | 4_2:+5098160 | Msa0584890:CDS |
| GTTCAGAAAAGGGCTTCGGT+AGG | 0.639531 | 4_2:-5104509 | None:intergenic |
| CCATTACTGTAGAATAGGGA+GGG | 0.639863 | 4_2:+5104633 | Msa0584890:three_prime_UTR |
| TCATTGTTTAATGACTCTGA+AGG | 0.648459 | 4_2:+5103550 | Msa0584890:CDS |
| CGACATATTGCCTCTACCAG+AGG | 0.648612 | 4_2:-5103194 | None:intergenic |
| AAATCCAGCCCATTTGACGA+AGG | 0.650722 | 4_2:+5102877 | Msa0584890:CDS |
| GTGCAACGTCAAGAGGTGAA+AGG | 0.651539 | 4_2:+5103305 | Msa0584890:CDS |
| GAGGTTGCAGACAGTAACAA+TGG | 0.654117 | 4_2:-5099077 | None:intergenic |
| TTCGTTCCGTTCAGAGAACG+CGG | 0.654302 | 4_2:-5096779 | None:intergenic |
| GGTGAAGAGAGTGGAAAACG+TGG | 0.662930 | 4_2:+5102330 | Msa0584890:CDS |
| CTAACCTAATATCATCACAC+TGG | 0.667427 | 4_2:-5100445 | None:intergenic |
| GATTCACGGAAGGAAGATGG+TGG | 0.670231 | 4_2:+5096857 | Msa0584890:CDS |
| TACACGTGCTGTGATGCATG+TGG | 0.671444 | 4_2:+5099857 | Msa0584890:CDS |
| TCATTGGTTAATGACTCTGA+AGG | 0.671545 | 4_2:+5103583 | Msa0584890:CDS |
| ATCTTAATGGAGAAGAACAG+GGG | 0.675777 | 4_2:+5097888 | Msa0584890:CDS |
| AGACCACAATCAAGGGCCAG+AGG | 0.675986 | 4_2:+5103491 | Msa0584890:CDS |
| CTGGGAATGGACTAAGCGTG+AGG | 0.676321 | 4_2:+5099254 | Msa0584890:CDS |
| GAGGGATCTCACATCATGCG+GGG | 0.683546 | 4_2:+5103241 | Msa0584890:CDS |
| TTTGCATTAGATAGCCACGA+TGG | 0.685268 | 4_2:+5102908 | Msa0584890:CDS |
| ACGCTTGCATTATCAGACAG+TGG | 0.687163 | 4_2:-5102429 | None:intergenic |
| TCACGCTTAGTCCATTCCCA+GGG | 0.687991 | 4_2:-5099252 | None:intergenic |
| CTGCTGAGGAGTATGCTAGG+AGG | 0.692798 | 4_2:+5097041 | Msa0584890:CDS |
| ACAGACTCTACCTTATGAGG+AGG | 0.696642 | 4_2:-5099096 | None:intergenic |
| TACATGTCCTACTTGTCGTG+GGG | 0.701115 | 4_2:+5101636 | Msa0584890:CDS |
| TATGTCCAGCTGCTCCATCG+TGG | 0.712679 | 4_2:-5102922 | None:intergenic |
| CTAACAGCAACAATTTCCGG+CGG | 0.727273 | 4_2:-5096920 | None:intergenic |
| AAAACCAGCAGCAATCTGGG+CGG | 0.740560 | 4_2:-5104430 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATTGAATTTTAATATATA+TGG | - | chr4_2:5096424-5096443 | None:intergenic | 10.0% |
| !! | TTTACATAATATATAAAAAG+GGG | - | chr4_2:5096446-5096465 | None:intergenic | 10.0% |
| !!! | AGATTTCAATTTTTTTTTTT+TGG | - | chr4_2:5096541-5096560 | None:intergenic | 10.0% |
| !! | GATTAAAACATAAATAAATT+TGG | - | chr4_2:5098419-5098438 | None:intergenic | 10.0% |
| !!! | TTTGATATATTTTCTAATTT+TGG | + | chr4_2:5100031-5100050 | Msa0584890:intron | 10.0% |
| !!! | GCTTTTTATTAAATTTTTTT+AGG | + | chr4_2:5103745-5103764 | Msa0584890:intron | 10.0% |
| !! | TATTTGATCAATAAATTTAA+AGG | + | chr4_2:5104040-5104059 | Msa0584890:intron | 10.0% |
| !! | ATATGGGAATTAAAAAAAAA+GGG | - | chr4_2:5096407-5096426 | None:intergenic | 15.0% |
| !! | TATATGGGAATTAAAAAAAA+AGG | - | chr4_2:5096408-5096427 | None:intergenic | 15.0% |
| !! | TTAGAACATAATAGTATATA+TGG | - | chr4_2:5098074-5098093 | None:intergenic | 15.0% |
| !! | TCTAAATATTAATGTAACAA+CGG | + | chr4_2:5098255-5098274 | Msa0584890:intron | 15.0% |
| !! | ATTGACATTATAACTATAAT+GGG | - | chr4_2:5098300-5098319 | None:intergenic | 15.0% |
| !! | ATACATAATCATATATGAAT+TGG | - | chr4_2:5099160-5099179 | None:intergenic | 15.0% |
| !! | AAAAAAAACACAAATTATTC+TGG | - | chr4_2:5099287-5099306 | None:intergenic | 15.0% |
| !!! | TCATTTACATGTTTTAAAAT+TGG | - | chr4_2:5099647-5099666 | None:intergenic | 15.0% |
| !!! | ATATATTTTCTAATTTTGGA+AGG | + | chr4_2:5100035-5100054 | Msa0584890:intron | 15.0% |
| !!! | TATTTTCAATGTTATCAATA+GGG | - | chr4_2:5100673-5100692 | None:intergenic | 15.0% |
| !!! | ATATTTTCAATGTTATCAAT+AGG | - | chr4_2:5100674-5100693 | None:intergenic | 15.0% |
| !!! | ATTGATAACATTGAAAATAT+CGG | + | chr4_2:5100674-5100693 | Msa0584890:intron | 15.0% |
| !! | ATAAAATAAGCATATCAAAT+TGG | - | chr4_2:5101554-5101573 | None:intergenic | 15.0% |
| !! | AACAAGTAATTATATATTGA+AGG | - | chr4_2:5101684-5101703 | None:intergenic | 15.0% |
| !!! | AATAAGTTGGTTATAAATTT+GGG | + | chr4_2:5102378-5102397 | Msa0584890:CDS | 15.0% |
| !!! | TTGATTTTAAATTTCAGTAA+AGG | - | chr4_2:5103430-5103449 | None:intergenic | 15.0% |
| !! | AAAATTTAATAAAAAGCTGA+AGG | - | chr4_2:5103742-5103761 | None:intergenic | 15.0% |
| !!! | TATTAAATTTTTTTAGGCAA+TGG | + | chr4_2:5103751-5103770 | Msa0584890:intron | 15.0% |
| !! | ATAATAAATAATGTCATTCA+CGG | + | chr4_2:5103802-5103821 | Msa0584890:intron | 15.0% |
| !!! | AAAAAAAAATTTTACAGCAT+TGG | + | chr4_2:5104013-5104032 | Msa0584890:intron | 15.0% |
| !! | TATGGGAATTAAAAAAAAAG+GGG | - | chr4_2:5096406-5096425 | None:intergenic | 20.0% |
| !!! | ATAATTTTAGAGAAAAGAAG+AGG | + | chr4_2:5096492-5096511 | Msa0584890:five_prime_UTR | 20.0% |
| !!! | TAATTTTAGAGAAAAGAAGA+GGG | + | chr4_2:5096493-5096512 | Msa0584890:five_prime_UTR | 20.0% |
| !!! | TTTTTTTTTGGTGTAGTTTA+GGG | - | chr4_2:5096529-5096548 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTGGTGTAGTTT+AGG | - | chr4_2:5096530-5096549 | None:intergenic | 20.0% |
| !! | AATTGAAATTGAAAAGAAGA+GGG | - | chr4_2:5096673-5096692 | None:intergenic | 20.0% |
| !! | TAATTGAAATTGAAAAGAAG+AGG | - | chr4_2:5096674-5096693 | None:intergenic | 20.0% |
| !! | ATCAAAATTTCACATAACTA+GGG | - | chr4_2:5097101-5097120 | None:intergenic | 20.0% |
| !! | TACAAAATATTGTGAAATAC+CGG | - | chr4_2:5097418-5097437 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTTTATTACTGAC+CGG | + | chr4_2:5097837-5097856 | Msa0584890:intron | 20.0% |
| !! | CATTGACATTATAACTATAA+TGG | - | chr4_2:5098301-5098320 | None:intergenic | 20.0% |
| !! | GACATAACATAATAAATCAT+GGG | - | chr4_2:5099354-5099373 | None:intergenic | 20.0% |
| !!! | TACCACCTTTTTTTTTTTTT+TGG | + | chr4_2:5099493-5099512 | Msa0584890:intron | 20.0% |
| !! | AACCAAAAAAAAAAAAAAGG+TGG | - | chr4_2:5099498-5099517 | None:intergenic | 20.0% |
| !! | GCTAACCAAAAAAAAAAAAA+AGG | - | chr4_2:5099501-5099520 | None:intergenic | 20.0% |
| !!! | TTATTAATGTTGTTTTGAAC+AGG | + | chr4_2:5099576-5099595 | Msa0584890:intron | 20.0% |
| !!! | TCTCTTTTATTGAAATTCAT+AGG | + | chr4_2:5099822-5099841 | Msa0584890:intron | 20.0% |
| !! | AATATATCAAAAAATTCCGT+TGG | - | chr4_2:5100022-5100041 | None:intergenic | 20.0% |
| !! | AGGATAATATACAGAATATA+AGG | - | chr4_2:5100069-5100088 | None:intergenic | 20.0% |
| !!! | TATTCTGTATATTATCCTTT+TGG | + | chr4_2:5100071-5100090 | Msa0584890:intron | 20.0% |
| !!! | ACTGTCATTTAATTTCATTT+TGG | + | chr4_2:5100235-5100254 | Msa0584890:intron | 20.0% |
| !!! | ATTTTCAATGTTATCAATAG+GGG | - | chr4_2:5100672-5100691 | None:intergenic | 20.0% |
| !!! | TCACTTTTAATTTTTGTTTC+TGG | + | chr4_2:5100870-5100889 | Msa0584890:intron | 20.0% |
| !!! | TGAGATTTTAAGTTTTATGT+CGG | + | chr4_2:5100949-5100968 | Msa0584890:intron | 20.0% |
| !!! | TATAACCATTGATAACATTT+TGG | + | chr4_2:5101255-5101274 | Msa0584890:intron | 20.0% |
| !! | AAATACCAAAATGTTATCAA+TGG | - | chr4_2:5101263-5101282 | None:intergenic | 20.0% |
| !!! | ATAATTACTTGTTTCTCAAT+TGG | + | chr4_2:5101691-5101710 | Msa0584890:intron | 20.0% |
| !!! | GAATAAGTTGGTTATAAATT+TGG | + | chr4_2:5102377-5102396 | Msa0584890:CDS | 20.0% |
| !! | TGATAAATTTAAACAGGAAA+AGG | - | chr4_2:5102849-5102868 | None:intergenic | 20.0% |
| !!! | TTTTCCTGTTTAAATTTATC+AGG | + | chr4_2:5102848-5102867 | Msa0584890:intron | 20.0% |
| !! | ATTTCCTGATAAATTTAAAC+AGG | - | chr4_2:5102855-5102874 | None:intergenic | 20.0% |
| !!! | TCATATAATTTTCAGGAAAT+AGG | + | chr4_2:5103071-5103090 | Msa0584890:intron | 20.0% |
| !!! | CATATAATTTTCAGGAAATA+GGG | + | chr4_2:5103072-5103091 | Msa0584890:intron | 20.0% |
| !!! | AAACCTTTATATGTTTTGAT+TGG | - | chr4_2:5103108-5103127 | None:intergenic | 20.0% |
| !! | TCAAAACATATAAAGGTTTA+CGG | + | chr4_2:5103109-5103128 | Msa0584890:CDS | 20.0% |
| !! | AACAATGATCTTTCTTTAAA+AGG | - | chr4_2:5103538-5103557 | None:intergenic | 20.0% |
| !! | TAATAAATAATGTCATTCAC+GGG | + | chr4_2:5103803-5103822 | Msa0584890:intron | 20.0% |
| !! | CGAAACATATAATAAATTAC+TGG | - | chr4_2:5103843-5103862 | None:intergenic | 20.0% |
| !! | GAATATAAATTTCACTAAAG+AGG | - | chr4_2:5104406-5104425 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGGTGTAGTTTAG+GGG | - | chr4_2:5096528-5096547 | None:intergenic | 25.0% |
| ! | TCTAAATCTCAAACAACTTA+TGG | + | chr4_2:5096558-5096577 | Msa0584890:exon | 25.0% |
| ! | CATCAAAATTTCACATAACT+AGG | - | chr4_2:5097102-5097121 | None:intergenic | 25.0% |
| !!! | AAATTTTGATGTGTGATTTG+TGG | + | chr4_2:5097111-5097130 | Msa0584890:intron | 25.0% |
| ! | TTGATATGCAAAATTTGTGA+AGG | + | chr4_2:5097512-5097531 | Msa0584890:intron | 25.0% |
| !!! | TAATTTTTTTGTGTGATGTG+TGG | + | chr4_2:5097752-5097771 | Msa0584890:intron | 25.0% |
| !!! | AATTTTTTTGTGTGATGTGT+GGG | + | chr4_2:5097753-5097772 | Msa0584890:intron | 25.0% |
| !!! | TGTGGATTTCTTGTATTTTT+TGG | + | chr4_2:5097790-5097809 | Msa0584890:intron | 25.0% |
| !!! | GTGGATTTCTTGTATTTTTT+GGG | + | chr4_2:5097791-5097810 | Msa0584890:intron | 25.0% |
| !!! | TCTTGTATTTTTTGGGAATT+AGG | + | chr4_2:5097798-5097817 | Msa0584890:intron | 25.0% |
| !! | AAAAGTTGGTCTAATAATAG+AGG | + | chr4_2:5098031-5098050 | Msa0584890:CDS | 25.0% |
| !! | TTTTGGCAGATTTATTTCAT+TGG | + | chr4_2:5098123-5098142 | Msa0584890:intron | 25.0% |
| ! | TTTCATGTATTGTCTGTTTA+AGG | + | chr4_2:5098222-5098241 | Msa0584890:intron | 25.0% |
| !! | TTTTTGACAAAAGACAGAAA+AGG | - | chr4_2:5098441-5098460 | None:intergenic | 25.0% |
| ! | AATAAAAATAAACAGCGCAT+AGG | - | chr4_2:5098553-5098572 | None:intergenic | 25.0% |
| !!! | ATGCGCTGTTTATTTTTATT+TGG | + | chr4_2:5098553-5098572 | Msa0584890:intron | 25.0% |
| !!! | AATTGATTTTGTATCCTACA+TGG | + | chr4_2:5098582-5098601 | Msa0584890:intron | 25.0% |
| ! | ATTACCAGTTCGTAAATAAA+CGG | - | chr4_2:5098632-5098651 | None:intergenic | 25.0% |
| !! | ATTTTGAACGCAATGTAAAA+TGG | - | chr4_2:5098726-5098745 | None:intergenic | 25.0% |
| ! | ATATATATATGTCGGTAAGA+CGG | - | chr4_2:5098834-5098853 | None:intergenic | 25.0% |
| ! | ACACATAAATTGAATGTCTT+TGG | + | chr4_2:5098912-5098931 | Msa0584890:intron | 25.0% |
| !!! | TTTTTTTTTACTCAGATGTG+TGG | + | chr4_2:5099300-5099319 | Msa0584890:intron | 25.0% |
| ! | AACATAATAAATCATGGGAA+TGG | - | chr4_2:5099349-5099368 | None:intergenic | 25.0% |
| ! | GGACATAACATAATAAATCA+TGG | - | chr4_2:5099355-5099374 | None:intergenic | 25.0% |
| !!! | GTCCCTTATAATTGTTTTTA+TGG | + | chr4_2:5099371-5099390 | Msa0584890:intron | 25.0% |
| ! | GGCCATAAAAACAATTATAA+GGG | - | chr4_2:5099376-5099395 | None:intergenic | 25.0% |
| ! | TGGCCATAAAAACAATTATA+AGG | - | chr4_2:5099377-5099396 | None:intergenic | 25.0% |
| !! | CTTTTATTGAAATTCATAGG+TGG | + | chr4_2:5099825-5099844 | Msa0584890:intron | 25.0% |
| !! | GATTAGTGTTGTTAAATAAC+TGG | + | chr4_2:5100486-5100505 | Msa0584890:intron | 25.0% |
| ! | GATATGTAATAGTGGTAAAT+CGG | - | chr4_2:5100519-5100538 | None:intergenic | 25.0% |
| ! | GATTTACCACTATTACATAT+CGG | + | chr4_2:5100518-5100537 | Msa0584890:intron | 25.0% |
| ! | ATTTACCACTATTACATATC+GGG | + | chr4_2:5100519-5100538 | Msa0584890:intron | 25.0% |
| ! | TGTGGTTATTGTTTACATAT+CGG | + | chr4_2:5100624-5100643 | Msa0584890:intron | 25.0% |
| ! | AAAATAAAACAATGCTGAGT+GGG | + | chr4_2:5100722-5100741 | Msa0584890:intron | 25.0% |
| ! | TATGAAGTAAAGAGAGAAAA+TGG | - | chr4_2:5100828-5100847 | None:intergenic | 25.0% |
| ! | AAAAATCGAATGAGAAATAG+TGG | - | chr4_2:5101095-5101114 | None:intergenic | 25.0% |
| !!! | ACTATTTCTCATTCGATTTT+TGG | + | chr4_2:5101094-5101113 | Msa0584890:intron | 25.0% |
| ! | ATGTTATTAATAGCTTATCG+CGG | - | chr4_2:5101135-5101154 | None:intergenic | 25.0% |
| ! | CGATAAGCTATTAATAACAT+TGG | + | chr4_2:5101135-5101154 | Msa0584890:intron | 25.0% |
| ! | ATAGCATAATTTACAAGACA+AGG | - | chr4_2:5101501-5101520 | None:intergenic | 25.0% |
| ! | GAAAATATTTCTTCTTGTGT+TGG | - | chr4_2:5101862-5101881 | None:intergenic | 25.0% |
| !! | GAATCATTCTTTAACTTCAA+AGG | - | chr4_2:5101919-5101938 | None:intergenic | 25.0% |
| ! | TATTAGATCTTTACATAGCT+TGG | + | chr4_2:5102104-5102123 | Msa0584890:CDS | 25.0% |
| ! | TGTTCGAATTAAAAGCAATA+AGG | + | chr4_2:5102293-5102312 | Msa0584890:CDS | 25.0% |
| !! | AAGCAATAAGGCAAATATTT+TGG | + | chr4_2:5102305-5102324 | Msa0584890:CDS | 25.0% |
| !!! | AATAAGGCAAATATTTTGGA+TGG | + | chr4_2:5102309-5102328 | Msa0584890:CDS | 25.0% |
| ! | GAATGTGAAAAAGAATAAGT+TGG | + | chr4_2:5102365-5102384 | Msa0584890:CDS | 25.0% |
| !! | TGGCATATTTTATACATTGT+AGG | + | chr4_2:5102678-5102697 | Msa0584890:intron | 25.0% |
| !! | CATAGGTTCATATAATTTTC+AGG | + | chr4_2:5103064-5103083 | Msa0584890:intron | 25.0% |
| ! | AAGTTGAATTCAGAAACATT+TGG | - | chr4_2:5103172-5103191 | None:intergenic | 25.0% |
| !!! | AGTAAAGGTTTAGAATCTTT+TGG | - | chr4_2:5103415-5103434 | None:intergenic | 25.0% |
| ! | GAATATAAATCATGAGAACA+TGG | + | chr4_2:5103627-5103646 | Msa0584890:CDS | 25.0% |
| !!! | AAACTGGATTTTGATGAAAT+TGG | + | chr4_2:5103654-5103673 | Msa0584890:CDS | 25.0% |
| !!! | AACTGGATTTTGATGAAATT+GGG | + | chr4_2:5103655-5103674 | Msa0584890:CDS | 25.0% |
| ! | AATAAATAATGTCATTCACG+GGG | + | chr4_2:5103804-5103823 | Msa0584890:intron | 25.0% |
| !! | ATATAATAAATTACTGGCTG+GGG | - | chr4_2:5103837-5103856 | None:intergenic | 25.0% |
| !! | CATATAATAAATTACTGGCT+GGG | - | chr4_2:5103838-5103857 | None:intergenic | 25.0% |
| ! | ACATATAATAAATTACTGGC+TGG | - | chr4_2:5103839-5103858 | None:intergenic | 25.0% |
| ! | TCATTCTAGACTTGTAATAA+TGG | + | chr4_2:5104077-5104096 | Msa0584890:intron | 25.0% |
| ! | TAGAAGATTATTCATCTTTG+AGG | + | chr4_2:5104380-5104399 | Msa0584890:three_prime_UTR | 25.0% |
| !! | AAAGTGCTGTAAGTAAGTAA+AGG | - | chr4_2:5096371-5096390 | None:intergenic | 30.0% |
| !! | AAGAAGCATTACCATGTAAT+TGG | - | chr4_2:5096601-5096620 | None:intergenic | 30.0% |
| AAGAAGAGAAAGAAAAGAGA+GGG | - | chr4_2:5096647-5096666 | None:intergenic | 30.0% | |
| AAAGAAGAGAAAGAAAAGAG+AGG | - | chr4_2:5096648-5096667 | None:intergenic | 30.0% | |
| !! | AGAATTTGTTTCTGTTCGTT+AGG | + | chr4_2:5096752-5096771 | Msa0584890:CDS | 30.0% |
| !! | GAATTTGTTTCTGTTCGTTA+GGG | + | chr4_2:5096753-5096772 | Msa0584890:CDS | 30.0% |
| !!! | AATTTGCTGAGTGATTTTCT+CGG | + | chr4_2:5096833-5096852 | Msa0584890:CDS | 30.0% |
| !! | GATTTTAGTGTTGTCAATTG+CGG | + | chr4_2:5097156-5097175 | Msa0584890:intron | 30.0% |
| TTTAATTCCGCTATGCAAAA+GGG | + | chr4_2:5097384-5097403 | Msa0584890:intron | 30.0% | |
| TTTGACAACACTAGTTGATT+TGG | + | chr4_2:5097657-5097676 | Msa0584890:intron | 30.0% | |
| TTATTATGTTTGTGTGTGCT+TGG | + | chr4_2:5097725-5097744 | Msa0584890:intron | 30.0% | |
| !!! | TGGGTAATTTTTTTGTCTTG+TGG | + | chr4_2:5097772-5097791 | Msa0584890:intron | 30.0% |
| GATACATCTGGAAATCTTAA+TGG | + | chr4_2:5097875-5097894 | Msa0584890:CDS | 30.0% | |
| AAATCTTAATGGAGAAGAAC+AGG | + | chr4_2:5097886-5097905 | Msa0584890:CDS | 30.0% | |
| AATCTTAATGGAGAAGAACA+GGG | + | chr4_2:5097887-5097906 | Msa0584890:CDS | 30.0% | |
| ATTTATTTCATTGGAGTTCG+TGG | + | chr4_2:5098132-5098151 | Msa0584890:CDS | 30.0% | |
| CACTTTCATTATTTAAGCGT+GGG | - | chr4_2:5098359-5098378 | None:intergenic | 30.0% | |
| ACACTTTCATTATTTAAGCG+TGG | - | chr4_2:5098360-5098379 | None:intergenic | 30.0% | |
| !! | TAATGAAAGTGTTTCAACAC+TGG | + | chr4_2:5098368-5098387 | Msa0584890:intron | 30.0% |
| !! | AATGAAAGTGTTTCAACACT+GGG | + | chr4_2:5098369-5098388 | Msa0584890:intron | 30.0% |
| TTAAAAGACAGACAGAGAAA+AGG | - | chr4_2:5098473-5098492 | None:intergenic | 30.0% | |
| GTTTAATCATATTGCCATGT+AGG | - | chr4_2:5098599-5098618 | None:intergenic | 30.0% | |
| TTAACCGTTTATTTACGAAC+TGG | + | chr4_2:5098625-5098644 | Msa0584890:intron | 30.0% | |
| TACTCTAATGAAACAATAGC+TGG | - | chr4_2:5098962-5098981 | None:intergenic | 30.0% | |
| !! | TGTTTCATTAGAGTACTGTT+TGG | + | chr4_2:5098967-5098986 | Msa0584890:intron | 30.0% |
| !!! | ATGTTTTGTTTGCTTCATCT+AGG | + | chr4_2:5098993-5099012 | Msa0584890:intron | 30.0% |
| AATACTAAGCTCACTAGTAA+GGG | - | chr4_2:5099124-5099143 | None:intergenic | 30.0% | |
| ATAATGCAGAATGTTAGTAC+TGG | + | chr4_2:5099178-5099197 | Msa0584890:intron | 30.0% | |
| TAATGCAGAATGTTAGTACT+GGG | + | chr4_2:5099179-5099198 | Msa0584890:intron | 30.0% | |
| TCAAAGTTTATCTTCCTAGT+TGG | + | chr4_2:5099433-5099452 | Msa0584890:intron | 30.0% | |
| TTGCTCATCAAAACTAAAGA+CGG | - | chr4_2:5099746-5099765 | None:intergenic | 30.0% | |
| !!! | TTAGTTTTGATGAGCAACTA+TGG | + | chr4_2:5099749-5099768 | Msa0584890:intron | 30.0% |
| CAACATGCTACAAGAAAATT+AGG | - | chr4_2:5099952-5099971 | None:intergenic | 30.0% | |
| AAATCACAATCAGCTATCAT+TGG | + | chr4_2:5099977-5099996 | Msa0584890:intron | 30.0% | |
| AATCACAATCAGCTATCATT+GGG | + | chr4_2:5099978-5099997 | Msa0584890:intron | 30.0% | |
| AGTACATAGAACAATACCAA+CGG | + | chr4_2:5100003-5100022 | Msa0584890:intron | 30.0% | |
| ! | ATATTGTCTAGAAGTATGAC+AGG | + | chr4_2:5100144-5100163 | Msa0584890:intron | 30.0% |
| ! | TATTGTCTAGAAGTATGACA+GGG | + | chr4_2:5100145-5100164 | Msa0584890:intron | 30.0% |
| !!! | CTGTTTTTGGCTTATTTTGT+AGG | + | chr4_2:5100358-5100377 | Msa0584890:intron | 30.0% |
| AGCTACTACTAAAATAACAG+TGG | + | chr4_2:5100584-5100603 | Msa0584890:intron | 30.0% | |
| CAAAATAAAACAATGCTGAG+TGG | + | chr4_2:5100721-5100740 | Msa0584890:intron | 30.0% | |
| AGTGATGAGACGTTAAAAAT+GGG | - | chr4_2:5100788-5100807 | None:intergenic | 30.0% | |
| TAGTGATGAGACGTTAAAAA+TGG | - | chr4_2:5100789-5100808 | None:intergenic | 30.0% | |
| !!! | GTCGGTCACTTTTTTAATTT+CGG | + | chr4_2:5100967-5100986 | Msa0584890:intron | 30.0% |
| !!! | ATGTGCAGCATTAGTTTTTT+TGG | + | chr4_2:5101008-5101027 | Msa0584890:intron | 30.0% |
| TTTATATTTCAACCGCTTTG+TGG | + | chr4_2:5101043-5101062 | Msa0584890:intron | 30.0% | |
| AAATATCAGAAACCACAAAG+CGG | - | chr4_2:5101058-5101077 | None:intergenic | 30.0% | |
| GCAAAGAAAAGCAGTAAATA+TGG | - | chr4_2:5101185-5101204 | None:intergenic | 30.0% | |
| ACTCCAGAACATATATGTAA+AGG | + | chr4_2:5101206-5101225 | Msa0584890:intron | 30.0% | |
| GTTCCTTTACATATATGTTC+TGG | - | chr4_2:5101212-5101231 | None:intergenic | 30.0% | |
| CTCACTAGACATTAAGAAAT+AGG | - | chr4_2:5101296-5101315 | None:intergenic | 30.0% | |
| ATAATTTACAAGACAAGGTC+AGG | - | chr4_2:5101496-5101515 | None:intergenic | 30.0% | |
| !! | TTATGCTATGCTGTTTGTTT+TGG | + | chr4_2:5101512-5101531 | Msa0584890:intron | 30.0% |
| AAGATATCACCAATTTCAAG+TGG | + | chr4_2:5101597-5101616 | Msa0584890:CDS | 30.0% | |
| AAGATTTAATTACCAGCTTG+AGG | + | chr4_2:5101821-5101840 | Msa0584890:CDS | 30.0% | |
| AGATTTAATTACCAGCTTGA+GGG | + | chr4_2:5101822-5101841 | Msa0584890:CDS | 30.0% | |
| ATCTTGGTAGGTGAATTATT+GGG | - | chr4_2:5101973-5101992 | None:intergenic | 30.0% | |
| CTTTCCATAATCATTCATCT+TGG | - | chr4_2:5101989-5102008 | None:intergenic | 30.0% | |
| CAAAAAGACTGCTAAGAAAA+AGG | + | chr4_2:5102020-5102039 | Msa0584890:CDS | 30.0% | |
| GAAACGTAAGTTTAATGATG+AGG | + | chr4_2:5102236-5102255 | Msa0584890:CDS | 30.0% | |
| TAAGTTTAATGATGAGGTGA+TGG | + | chr4_2:5102242-5102261 | Msa0584890:CDS | 30.0% | |
| !! | CTTTTAATTCGAACAACTCT+GGG | - | chr4_2:5102288-5102307 | None:intergenic | 30.0% |
| TTCATGTAGACATATACCAT+TGG | - | chr4_2:5102481-5102500 | None:intergenic | 30.0% | |
| !!! | CCATATTTTAGCTTGAGAAA+CGG | + | chr4_2:5102531-5102550 | Msa0584890:intron | 30.0% |
| !!! | CATATTTTAGCTTGAGAAAC+GGG | + | chr4_2:5102532-5102551 | Msa0584890:intron | 30.0% |
| !!! | ATATTTTAGCTTGAGAAACG+GGG | + | chr4_2:5102533-5102552 | Msa0584890:intron | 30.0% |
| !!! | CCATATTTTAGCTTGAGAAA+CGG | + | chr4_2:5102531-5102550 | Msa0584890:intron | 30.0% |
| !!! | CATATTTTAGCTTGAGAAAC+GGG | + | chr4_2:5102532-5102551 | Msa0584890:intron | 30.0% |
| !!! | ATATTTTAGCTTGAGAAACG+GGG | + | chr4_2:5102533-5102552 | Msa0584890:intron | 30.0% |
| !! | AAATATGCCACTGATTTGAT+GGG | - | chr4_2:5102668-5102687 | None:intergenic | 30.0% |
| !! | AAAATATGCCACTGATTTGA+TGG | - | chr4_2:5102669-5102688 | None:intergenic | 30.0% |
| ! | ACATATTGATGGTAAAGGTA+GGG | + | chr4_2:5102940-5102959 | Msa0584890:intron | 30.0% |
| AAAGTCACAGATCAAAGAAA+GGG | - | chr4_2:5102977-5102996 | None:intergenic | 30.0% | |
| AAAAGTCACAGATCAAAGAA+AGG | - | chr4_2:5102978-5102997 | None:intergenic | 30.0% | |
| ATAACTCATACTTAATGCTC+AGG | - | chr4_2:5103012-5103031 | None:intergenic | 30.0% | |
| ! | TTGTCTCTGAAAAGTAACAT+AGG | + | chr4_2:5103047-5103066 | Msa0584890:intron | 30.0% |
| AGGCCAATCAAAACATATAA+AGG | + | chr4_2:5103102-5103121 | Msa0584890:CDS | 30.0% | |
| ATGATCAACCAAATTGGATT+AGG | + | chr4_2:5103283-5103302 | Msa0584890:CDS | 30.0% | |
| !!! | TGAGAATTTTGACTTTCGAT+AGG | - | chr4_2:5103457-5103476 | None:intergenic | 30.0% |
| ! | GATCTTTCTTTAAAAGGTGA+AGG | - | chr4_2:5103532-5103551 | None:intergenic | 30.0% |
| TCATTGTTTAATGACTCTGA+AGG | + | chr4_2:5103550-5103569 | Msa0584890:CDS | 30.0% | |
| TGAAGGTAAAGAAAGATCAT+TGG | + | chr4_2:5103567-5103586 | Msa0584890:CDS | 30.0% | |
| TCATGATTTATATTCTCTCC+AGG | - | chr4_2:5103622-5103641 | None:intergenic | 30.0% | |
| ATAAATAATGTCATTCACGG+GGG | + | chr4_2:5103805-5103824 | Msa0584890:intron | 30.0% | |
| CTTGAAAACTTGAGAAAGTT+TGG | + | chr4_2:5103968-5103987 | Msa0584890:intron | 30.0% | |
| ! | TTTTCCTTACATTTTTGTCC+AGG | + | chr4_2:5104117-5104136 | Msa0584890:intron | 30.0% |
| GTAAGTAACATGTAGATTTG+AGG | - | chr4_2:5104177-5104196 | None:intergenic | 30.0% | |
| TACTTTGTGAAATCAGATAC+AGG | - | chr4_2:5104587-5104606 | None:intergenic | 30.0% | |
| AATCATACATCTAACACCTA+GGG | - | chr4_2:5104664-5104683 | None:intergenic | 30.0% | |
| TAATCATACATCTAACACCT+AGG | - | chr4_2:5104665-5104684 | None:intergenic | 30.0% | |
| AAAAAAAGGGGTAGAGATGA+GGG | - | chr4_2:5096394-5096413 | None:intergenic | 35.0% | |
| AAAAAAAAGGGGTAGAGATG+AGG | - | chr4_2:5096395-5096414 | None:intergenic | 35.0% | |
| GGTGAAATTGTGATATGTGA+TGG | + | chr4_2:5097206-5097225 | Msa0584890:intron | 35.0% | |
| GAAATTGTGATATGTGATGG+TGG | + | chr4_2:5097209-5097228 | Msa0584890:intron | 35.0% | |
| TGTGTTTGAAAATTGAGCTG+TGG | + | chr4_2:5097244-5097263 | Msa0584890:intron | 35.0% | |
| !! | GTTGTTGATTTCAGTGTTGT+CGG | + | chr4_2:5097284-5097303 | Msa0584890:intron | 35.0% |
| GTTTAATTCCGCTATGCAAA+AGG | + | chr4_2:5097383-5097402 | Msa0584890:intron | 35.0% | |
| GTGTCAGTGTTGTCAAATAT+CGG | + | chr4_2:5097445-5097464 | Msa0584890:intron | 35.0% | |
| CTATTCAATGTTGTCGATAG+CGG | - | chr4_2:5097600-5097619 | None:intergenic | 35.0% | |
| CAACTAGTGTTGTCAAATAG+CGG | - | chr4_2:5097654-5097673 | None:intergenic | 35.0% | |
| !!! | TGTTTTTTATTACTGACCGG+TGG | + | chr4_2:5097840-5097859 | Msa0584890:intron | 35.0% |
| ! | TTTTATGTGCAGGATACATC+TGG | + | chr4_2:5097863-5097882 | Msa0584890:intron | 35.0% |
| ATCTTAATGGAGAAGAACAG+GGG | + | chr4_2:5097888-5097907 | Msa0584890:CDS | 35.0% | |
| TCGACAAAAGACCTTTACAT+TGG | - | chr4_2:5097918-5097937 | None:intergenic | 35.0% | |
| !! | GTTGTAGTAAGAAGTACCAT+AGG | + | chr4_2:5097999-5098018 | Msa0584890:CDS | 35.0% |
| GTCTAATAATAGAGGTGAGA+AGG | + | chr4_2:5098039-5098058 | Msa0584890:intron | 35.0% | |
| !!! | TTCATTCTGTGTCGACTTTT+TGG | + | chr4_2:5098106-5098125 | Msa0584890:intron | 35.0% |
| CCGTTATTACCTCACAAATT+CGG | - | chr4_2:5098172-5098191 | None:intergenic | 35.0% | |
| CCGAATTTGTGAGGTAATAA+CGG | + | chr4_2:5098169-5098188 | Msa0584890:intron | 35.0% | |
| CGAATTTGTGAGGTAATAAC+GGG | + | chr4_2:5098170-5098189 | Msa0584890:intron | 35.0% | |
| !! | ATGAAAGTGTTTCAACACTG+GGG | + | chr4_2:5098370-5098389 | Msa0584890:intron | 35.0% |
| ! | AACCTTCCATGCTTTGTTAT+TGG | + | chr4_2:5098659-5098678 | Msa0584890:intron | 35.0% |
| !! | ACCTTCCATGCTTTGTTATT+GGG | + | chr4_2:5098660-5098679 | Msa0584890:intron | 35.0% |
| !! | TTTGTTATTGGGAAACCAGT+TGG | + | chr4_2:5098671-5098690 | Msa0584890:intron | 35.0% |
| GAAACTAAAAACACGTCACA+AGG | - | chr4_2:5098767-5098786 | None:intergenic | 35.0% | |
| TCTTCTCATGTGCTTCATTT+AGG | + | chr4_2:5098785-5098804 | Msa0584890:intron | 35.0% | |
| TTGCAGAACATGAACTTACT+GGG | - | chr4_2:5099039-5099058 | None:intergenic | 35.0% | |
| TTTGCAGAACATGAACTTAC+TGG | - | chr4_2:5099040-5099059 | None:intergenic | 35.0% | |
| ATGTTCTGCAAAAGATGTGA+TGG | + | chr4_2:5099048-5099067 | Msa0584890:CDS | 35.0% | |
| CAATACTAAGCTCACTAGTA+AGG | - | chr4_2:5099125-5099144 | None:intergenic | 35.0% | |
| TGGGAATGGAAAAAACATTC+AGG | - | chr4_2:5099335-5099354 | None:intergenic | 35.0% | |
| !! | TGTTTTTATGGCCACATGAT+TGG | + | chr4_2:5099383-5099402 | Msa0584890:intron | 35.0% |
| GCTTTCATATTCCAATCATG+TGG | - | chr4_2:5099397-5099416 | None:intergenic | 35.0% | |
| !!! | TACTCTGAGGGTTTTGAAAA+TGG | + | chr4_2:5099544-5099563 | Msa0584890:intron | 35.0% |
| !!! | TAATGTTGTTTTGAACAGGC+AGG | + | chr4_2:5099580-5099599 | Msa0584890:intron | 35.0% |
| GTATCATCTTCGAATCAAGT+AGG | + | chr4_2:5099696-5099715 | Msa0584890:intron | 35.0% | |
| TGAAATTCATAGGTGGTTTC+TGG | + | chr4_2:5099832-5099851 | Msa0584890:intron | 35.0% | |
| GAAATTCATAGGTGGTTTCT+GGG | + | chr4_2:5099833-5099852 | Msa0584890:intron | 35.0% | |
| TGTGGAAGATTGTTTGTGAA+AGG | + | chr4_2:5099875-5099894 | Msa0584890:CDS | 35.0% | |
| GTGGAAGATTGTTTGTGAAA+GGG | + | chr4_2:5099876-5099895 | Msa0584890:CDS | 35.0% | |
| AAGAGATCTAGAGAAAAGAC+CGG | - | chr4_2:5099929-5099948 | None:intergenic | 35.0% | |
| ATCACAATCAGCTATCATTG+GGG | + | chr4_2:5099979-5099998 | Msa0584890:intron | 35.0% | |
| ATCTCCTACATTTAGACTCA+CGG | - | chr4_2:5100098-5100117 | None:intergenic | 35.0% | |
| ! | TAGAAGTATGACAGGGAATT+AGG | + | chr4_2:5100152-5100171 | Msa0584890:intron | 35.0% |
| CATGCTGTCTGAATGTTAAT+GGG | - | chr4_2:5100179-5100198 | None:intergenic | 35.0% | |
| ACATGCTGTCTGAATGTTAA+TGG | - | chr4_2:5100180-5100199 | None:intergenic | 35.0% | |
| ATTGCCAGTGTGATGATATT+AGG | + | chr4_2:5100441-5100460 | Msa0584890:CDS | 35.0% | |
| CTAACCTAATATCATCACAC+TGG | - | chr4_2:5100448-5100467 | None:intergenic | 35.0% | |
| ! | ATAACAGTGGCTTTTTGCAT+CGG | + | chr4_2:5100597-5100616 | Msa0584890:intron | 35.0% |
| ACGTTAAAAATGGGGGTTTA+GGG | - | chr4_2:5100779-5100798 | None:intergenic | 35.0% | |
| TGATGAGACGTTAAAAATGG+GGG | - | chr4_2:5100786-5100805 | None:intergenic | 35.0% | |
| GTGATGAGACGTTAAAAATG+GGG | - | chr4_2:5100787-5100806 | None:intergenic | 35.0% | |
| AGTAAAGAGAGAAAATGGAG+AGG | - | chr4_2:5100823-5100842 | None:intergenic | 35.0% | |
| ATACTGCATATCGTAACAGT+TGG | - | chr4_2:5101322-5101341 | None:intergenic | 35.0% | |
| TGTACCTCGAGAAAGAAAAA+AGG | - | chr4_2:5101387-5101406 | None:intergenic | 35.0% | |
| !! | TACATATAGATGCTTGCTGT+TGG | + | chr4_2:5101403-5101422 | Msa0584890:intron | 35.0% |
| ! | TATCACCAATTTCAAGTGGA+TGG | + | chr4_2:5101601-5101620 | Msa0584890:CDS | 35.0% |
| ! | ATCACCAATTTCAAGTGGAT+GGG | + | chr4_2:5101602-5101621 | Msa0584890:CDS | 35.0% |
| CATACAGATAGATGTACAGT+GGG | - | chr4_2:5101737-5101756 | None:intergenic | 35.0% | |
| ACATACAGATAGATGTACAG+TGG | - | chr4_2:5101738-5101757 | None:intergenic | 35.0% | |
| TACATCTATCTGTATGTTCC+AGG | + | chr4_2:5101741-5101760 | Msa0584890:intron | 35.0% | |
| ATCGTCAGAATATGGTGAAA+TGG | - | chr4_2:5101884-5101903 | None:intergenic | 35.0% | |
| CATCTTGGTAGGTGAATTAT+TGG | - | chr4_2:5101974-5101993 | None:intergenic | 35.0% | |
| CCATAATCATTCATCTTGGT+AGG | - | chr4_2:5101985-5102004 | None:intergenic | 35.0% | |
| CCTACCAAGATGAATGATTA+TGG | + | chr4_2:5101982-5102001 | Msa0584890:CDS | 35.0% | |
| CACTATGTCCTTCAAAACTA+TGG | - | chr4_2:5102083-5102102 | None:intergenic | 35.0% | |
| ATGCAATCTCAGAGAAATGA+AGG | + | chr4_2:5102132-5102151 | Msa0584890:CDS | 35.0% | |
| GCAGGTGATGAATAAATATC+AGG | - | chr4_2:5102159-5102178 | None:intergenic | 35.0% | |
| ATTTATTCATCACCTGCTAC+TGG | + | chr4_2:5102162-5102181 | Msa0584890:CDS | 35.0% | |
| !! | GCTTTTAATTCGAACAACTC+TGG | - | chr4_2:5102289-5102308 | None:intergenic | 35.0% |
| TGGTTATAAATTTGGGAGCA+CGG | + | chr4_2:5102385-5102404 | Msa0584890:CDS | 35.0% | |
| TAACCAGATCTTGATCTCTT+TGG | - | chr4_2:5102455-5102474 | None:intergenic | 35.0% | |
| CCGTTTCTCAAGCTAAAATA+TGG | - | chr4_2:5102534-5102553 | None:intergenic | 35.0% | |
| ! | AAGCTAAAATATGGTGACGT+AGG | - | chr4_2:5102573-5102592 | None:intergenic | 35.0% |
| CCGTTTCTCAAGCTAAAATA+TGG | - | chr4_2:5102534-5102553 | None:intergenic | 35.0% | |
| !! | AATATGCCACTGATTTGATG+GGG | - | chr4_2:5102667-5102686 | None:intergenic | 35.0% |
| ! | GACATATTGATGGTAAAGGT+AGG | + | chr4_2:5102939-5102958 | Msa0584890:intron | 35.0% |
| ! | CTTTTCAGAGACAACTCATA+TGG | - | chr4_2:5103041-5103060 | None:intergenic | 35.0% |
| ATAAAGGTTTACGGAAGAGA+AGG | + | chr4_2:5103118-5103137 | Msa0584890:CDS | 35.0% | |
| GAAGGAAACACAATCAAGTT+CGG | + | chr4_2:5103136-5103155 | Msa0584890:CDS | 35.0% | |
| CATGGAATGATCAACCAAAT+TGG | + | chr4_2:5103277-5103296 | Msa0584890:CDS | 35.0% | |
| AAGAGGTGAAAGGACATATT+TGG | + | chr4_2:5103315-5103334 | Msa0584890:CDS | 35.0% | |
| ! | AATGTGAAGGCATGTGATTA+TGG | - | chr4_2:5103387-5103406 | None:intergenic | 35.0% |
| ! | TCTTTTGGCAAAGAATGTGA+AGG | - | chr4_2:5103400-5103419 | None:intergenic | 35.0% |
| CGAAAGTCAAAATTCTCATC+AGG | + | chr4_2:5103459-5103478 | Msa0584890:CDS | 35.0% | |
| TCAAAATTCTCATCAGGAAG+AGG | + | chr4_2:5103465-5103484 | Msa0584890:CDS | 35.0% | |
| ! | TCATTGGTTAATGACTCTGA+AGG | + | chr4_2:5103583-5103602 | Msa0584890:CDS | 35.0% |
| AAATTGGGAAGTGATGCAAT+TGG | + | chr4_2:5103670-5103689 | Msa0584890:CDS | 35.0% | |
| ! | CTACATGTTACTTACGATGA+TGG | + | chr4_2:5104182-5104201 | Msa0584890:CDS | 35.0% |
| TGATGGAAAAGTGAGTATCT+TGG | + | chr4_2:5104199-5104218 | Msa0584890:CDS | 35.0% | |
| !! | TTCGATCTCTTTTGCTTTTG+AGG | - | chr4_2:5104254-5104273 | None:intergenic | 35.0% |
| TTCGCATAAAACAATCCCAA+GGG | - | chr4_2:5104298-5104317 | None:intergenic | 35.0% | |
| TTTCGCATAAAACAATCCCA+AGG | - | chr4_2:5104299-5104318 | None:intergenic | 35.0% | |
| TCCACATAAAACAATCCCAA+GGG | - | chr4_2:5104342-5104361 | None:intergenic | 35.0% | |
| TTTGGGTAAGCATTCTCTAT+TGG | + | chr4_2:5104451-5104470 | Msa0584890:three_prime_UTR | 35.0% | |
| ! | TGGAGCAATTTCAGTTTTCT+TGG | + | chr4_2:5104471-5104490 | Msa0584890:three_prime_UTR | 35.0% |
| ! | GCAATTTCAGTTTTCTTGGA+AGG | + | chr4_2:5104475-5104494 | Msa0584890:three_prime_UTR | 35.0% |
| ACGTTGCTTGTCCAATTACA+TGG | + | chr4_2:5096587-5096606 | Msa0584890:CDS | 40.0% | |
| ! | GTGATTTTCTCGGTGATTCA+CGG | + | chr4_2:5096843-5096862 | Msa0584890:CDS | 40.0% |
| TTTAGTGTTGTCAATTGCGG+CGG | + | chr4_2:5097159-5097178 | Msa0584890:intron | 40.0% | |
| GTTCTAATTCCTCTGTGCAA+CGG | + | chr4_2:5097185-5097204 | Msa0584890:intron | 40.0% | |
| ! | GTTATAGCCCTTTTGCATAG+CGG | - | chr4_2:5097394-5097413 | None:intergenic | 40.0% |
| TATCCTGCACATAAAACCAC+CGG | - | chr4_2:5097859-5097878 | None:intergenic | 40.0% | |
| !! | AACTTTTCAAGCAGCTCCTA+TGG | - | chr4_2:5098018-5098037 | None:intergenic | 40.0% |
| ATAGGAGCTGCTTGAAAAGT+TGG | + | chr4_2:5098017-5098036 | Msa0584890:CDS | 40.0% | |
| TCCCAATAACAAAGCATGGA+AGG | - | chr4_2:5098664-5098683 | None:intergenic | 40.0% | |
| GGTTTCCCAATAACAAAGCA+TGG | - | chr4_2:5098668-5098687 | None:intergenic | 40.0% | |
| !!! | CAGTTGGTTTTAGTGGCTTT+GGG | + | chr4_2:5098687-5098706 | Msa0584890:intron | 40.0% |
| !!! | AGTTGGTTTTAGTGGCTTTG+GGG | + | chr4_2:5098688-5098707 | Msa0584890:intron | 40.0% |
| ACACGTCACAAGGAAATAAG+TGG | - | chr4_2:5098757-5098776 | None:intergenic | 40.0% | |
| TTGCAGACAGTAACAATGGT+AGG | - | chr4_2:5099076-5099095 | None:intergenic | 40.0% | |
| GATACAGACTCTACCTTATG+AGG | - | chr4_2:5099102-5099121 | None:intergenic | 40.0% | |
| TGTGACACTTTGTGTGTTTC+GGG | - | chr4_2:5099216-5099235 | None:intergenic | 40.0% | |
| CTGTGACACTTTGTGTGTTT+CGG | - | chr4_2:5099217-5099236 | None:intergenic | 40.0% | |
| TTTACTCAGATGTGTGGTGT+TGG | + | chr4_2:5099306-5099325 | Msa0584890:intron | 40.0% | |
| !! | AATTTGGCTTTCGTCCAACT+AGG | - | chr4_2:5099450-5099469 | None:intergenic | 40.0% |
| GCGCATTCAGCAAAAGAATT+TGG | - | chr4_2:5099466-5099485 | None:intergenic | 40.0% | |
| TTACTGTCCTGTTTGTCTGA+AGG | + | chr4_2:5099901-5099920 | Msa0584890:CDS | 40.0% | |
| ATTTAGACTCACGGTCCAAA+AGG | - | chr4_2:5100089-5100108 | None:intergenic | 40.0% | |
| ACACATACACAATGTGTGTC+AGG | + | chr4_2:5100313-5100332 | Msa0584890:intron | 40.0% | |
| TACACAATGTGTGTCAGGAA+AGG | + | chr4_2:5100318-5100337 | Msa0584890:intron | 40.0% | |
| ! | CTGACTGATCACACTGTTTT+TGG | + | chr4_2:5100345-5100364 | Msa0584890:intron | 40.0% |
| AGATTCAGAGTCAACACCAA+TGG | + | chr4_2:5100388-5100407 | Msa0584890:CDS | 40.0% | |
| CAATGATCACAGCAAACCAT+TGG | - | chr4_2:5100407-5100426 | None:intergenic | 40.0% | |
| CCAAACCCGATATGTAATAG+TGG | - | chr4_2:5100527-5100546 | None:intergenic | 40.0% | |
| CCACTATTACATATCGGGTT+TGG | + | chr4_2:5100524-5100543 | Msa0584890:intron | 40.0% | |
| GACGTTAAAAATGGGGGTTT+AGG | - | chr4_2:5100780-5100799 | None:intergenic | 40.0% | |
| !! | AGAAATAGTGGATAGCGTAG+CGG | - | chr4_2:5101083-5101102 | None:intergenic | 40.0% |
| !!! | TGCACCTTTTTTCTTTCTCG+AGG | + | chr4_2:5101380-5101399 | Msa0584890:intron | 40.0% |
| TACAAGACAAGGTCAGGAAT+CGG | - | chr4_2:5101490-5101509 | None:intergenic | 40.0% | |
| GATTCCCATCCACTTGAAAT+TGG | - | chr4_2:5101609-5101628 | None:intergenic | 40.0% | |
| TATACATGTCCTACTTGTCG+TGG | + | chr4_2:5101634-5101653 | Msa0584890:CDS | 40.0% | |
| ATACATGTCCTACTTGTCGT+GGG | + | chr4_2:5101635-5101654 | Msa0584890:CDS | 40.0% | |
| TTCACCATATTCTGACGATG+AGG | + | chr4_2:5101885-5101904 | Msa0584890:CDS | 40.0% | |
| CTATCCTCATCGTCAGAATA+TGG | - | chr4_2:5101892-5101911 | None:intergenic | 40.0% | |
| TATTCTGACGATGAGGATAG+TGG | + | chr4_2:5101892-5101911 | Msa0584890:CDS | 40.0% | |
| ATTCTGACGATGAGGATAGT+GGG | + | chr4_2:5101893-5101912 | Msa0584890:CDS | 40.0% | |
| AAAATCCCTGTCTGATTGAC+AGG | - | chr4_2:5102216-5102235 | None:intergenic | 40.0% | |
| TGATGGTCAGTGATGAAGAA+AGG | + | chr4_2:5102259-5102278 | Msa0584890:CDS | 40.0% | |
| ! | ATTTTGGATGGTGAAGAGAG+TGG | + | chr4_2:5102321-5102340 | Msa0584890:CDS | 40.0% |
| GAAAACGTGGTGATAAGTCT+CGG | + | chr4_2:5102343-5102362 | Msa0584890:CDS | 40.0% | |
| GATTTGATGGGGACAAACAA+GGG | - | chr4_2:5102656-5102675 | None:intergenic | 40.0% | |
| TGATTTGATGGGGACAAACA+AGG | - | chr4_2:5102657-5102676 | None:intergenic | 40.0% | |
| TCGCTATGCAACAACAACTA+CGG | + | chr4_2:5102734-5102753 | Msa0584890:intron | 40.0% | |
| TGTGTGCACATGATCTTGAA+TGG | + | chr4_2:5102787-5102806 | Msa0584890:intron | 40.0% | |
| CTTGTTTCCCTTCGTCAAAT+GGG | - | chr4_2:5102888-5102907 | None:intergenic | 40.0% | |
| ACTTGTTTCCCTTCGTCAAA+TGG | - | chr4_2:5102889-5102908 | None:intergenic | 40.0% | |
| TTTGCATTAGATAGCCACGA+TGG | + | chr4_2:5102908-5102927 | Msa0584890:CDS | 40.0% | |
| ! | GCTGGACATATTGATGGTAA+AGG | + | chr4_2:5102935-5102954 | Msa0584890:CDS | 40.0% |
| CTCATACTTAATGCTCAGGA+AGG | - | chr4_2:5103008-5103027 | None:intergenic | 40.0% | |
| ! | TCAGGAAATAGGGTTGATTC+AGG | + | chr4_2:5103082-5103101 | Msa0584890:intron | 40.0% |
| TCTGAATTCAACTTCACCTC+TGG | + | chr4_2:5103178-5103197 | Msa0584890:CDS | 40.0% | |
| ATGATGTGAGATCCCTCTAA+AGG | - | chr4_2:5103238-5103257 | None:intergenic | 40.0% | |
| ACGTTGCACCTAATCCAATT+TGG | - | chr4_2:5103294-5103313 | None:intergenic | 40.0% | |
| ATGAGAACATGGATGCAAAC+TGG | + | chr4_2:5103638-5103657 | Msa0584890:CDS | 40.0% | |
| ATCAGACATCCGATGATTCT+TGG | + | chr4_2:5103710-5103729 | Msa0584890:CDS | 40.0% | |
| AGGCACTAACCAAGAATCAT+CGG | - | chr4_2:5103722-5103741 | None:intergenic | 40.0% | |
| GAGGGGGAAACATAAAATGA+TGG | - | chr4_2:5103867-5103886 | None:intergenic | 40.0% | |
| ACCAGATTATTACTTCGAGG+GGG | - | chr4_2:5103883-5103902 | None:intergenic | 40.0% | |
| CACCAGATTATTACTTCGAG+GGG | - | chr4_2:5103884-5103903 | None:intergenic | 40.0% | |
| CCACCAGATTATTACTTCGA+GGG | - | chr4_2:5103885-5103904 | None:intergenic | 40.0% | |
| ACCACCAGATTATTACTTCG+AGG | - | chr4_2:5103886-5103905 | None:intergenic | 40.0% | |
| TGTGCCTGGACAAAAATGTA+AGG | - | chr4_2:5104124-5104143 | None:intergenic | 40.0% | |
| ! | TACATTTTTGTCCAGGCACA+AGG | + | chr4_2:5104124-5104143 | Msa0584890:intron | 40.0% |
| ! | ACATTTTTGTCCAGGCACAA+GGG | + | chr4_2:5104125-5104144 | Msa0584890:intron | 40.0% |
| AAGTGAGTATCTTGGAACTC+AGG | + | chr4_2:5104207-5104226 | Msa0584890:CDS | 40.0% | |
| TATCTTGGAACTCAGGAAAC+AGG | + | chr4_2:5104214-5104233 | Msa0584890:CDS | 40.0% | |
| ATCTTGGAACTCAGGAAACA+GGG | + | chr4_2:5104215-5104234 | Msa0584890:CDS | 40.0% | |
| ACATAAAACAATCCCAAGGG+TGG | - | chr4_2:5104339-5104358 | None:intergenic | 40.0% | |
| !! | ACCCTTGGGATTGTTTTATG+TGG | + | chr4_2:5104294-5104313 | Msa0584890:intron | 40.0% |
| CTCCACATAAAACAATCCCA+AGG | - | chr4_2:5104343-5104362 | None:intergenic | 40.0% | |
| AGATCCTGCAGTTCAGAAAA+GGG | - | chr4_2:5104522-5104541 | None:intergenic | 40.0% | |
| AAGATCCTGCAGTTCAGAAA+AGG | - | chr4_2:5104523-5104542 | None:intergenic | 40.0% | |
| GATTTCTGCCTGTTATGTAC+AGG | + | chr4_2:5104607-5104626 | Msa0584890:three_prime_UTR | 40.0% | |
| GCCACCATTACTGTAGAATA+GGG | + | chr4_2:5104629-5104648 | Msa0584890:three_prime_UTR | 40.0% | |
| TCCCTATTCTACAGTAATGG+TGG | - | chr4_2:5104633-5104652 | None:intergenic | 40.0% | |
| ACCATTACTGTAGAATAGGG+AGG | + | chr4_2:5104632-5104651 | Msa0584890:three_prime_UTR | 40.0% | |
| CCATTACTGTAGAATAGGGA+GGG | + | chr4_2:5104633-5104652 | Msa0584890:three_prime_UTR | 40.0% | |
| ! | GACGAAGGATTTTCTCGATG+AGG | + | chr4_2:5096808-5096827 | Msa0584890:CDS | 45.0% |
| ! | TTTTCTCGGTGATTCACGGA+AGG | + | chr4_2:5096847-5096866 | Msa0584890:CDS | 45.0% |
| !! | TGGTGGAACGATTCAAGTTG+CGG | + | chr4_2:5096874-5096893 | Msa0584890:CDS | 45.0% |
| CTAACAGCAACAATTTCCGG+CGG | - | chr4_2:5096923-5096942 | None:intergenic | 45.0% | |
| CCGCTAACAGCAACAATTTC+CGG | - | chr4_2:5096926-5096945 | None:intergenic | 45.0% | |
| ! | CCGGAAATTGTTGCTGTTAG+CGG | + | chr4_2:5096923-5096942 | Msa0584890:CDS | 45.0% |
| ! | GAAATTGTTGCTGTTAGCGG+TGG | + | chr4_2:5096926-5096945 | Msa0584890:CDS | 45.0% |
| ! | AGCATCACGCTTAGCTTTCA+TGG | - | chr4_2:5096990-5097009 | None:intergenic | 45.0% |
| CGTGATGCTCTTCAGAGAAA+AGG | + | chr4_2:5097001-5097020 | Msa0584890:CDS | 45.0% | |
| TATGCTAGGAGGCTTGAATC+TGG | + | chr4_2:5097052-5097071 | Msa0584890:CDS | 45.0% | |
| !!! | GGCGATGTTGTGGTTAGTTT+TGG | + | chr4_2:5097073-5097092 | Msa0584890:intron | 45.0% |
| ACAATTTCACCGTTGCACAG+AGG | - | chr4_2:5097197-5097216 | None:intergenic | 45.0% | |
| AAAATTGAGCTGTGGAGTCG+TGG | + | chr4_2:5097252-5097271 | Msa0584890:intron | 45.0% | |
| AAATTGAGCTGTGGAGTCGT+GGG | + | chr4_2:5097253-5097272 | Msa0584890:intron | 45.0% | |
| TGCAAGTCAGTTGCGAATTG+TGG | + | chr4_2:5097347-5097366 | Msa0584890:intron | 45.0% | |
| ATGCAAAAGGGCTATAACGC+CGG | + | chr4_2:5097396-5097415 | Msa0584890:intron | 45.0% | |
| GTGTTGTCAAATATCGGCCA+TGG | + | chr4_2:5097451-5097470 | Msa0584890:intron | 45.0% | |
| ! | ATCTGCATCGATATCTGCTG+TGG | - | chr4_2:5097482-5097501 | None:intergenic | 45.0% |
| !!! | AGACCGGTATGTCGGTTTTT+TGG | + | chr4_2:5097560-5097579 | Msa0584890:intron | 45.0% |
| AGGCCAAAAAACCGACATAC+CGG | - | chr4_2:5097566-5097585 | None:intergenic | 45.0% | |
| ACAGGGGCAATCCAATGTAA+AGG | + | chr4_2:5097904-5097923 | Msa0584890:CDS | 45.0% | |
| CGACACAGAATGAAAACACG+TGG | - | chr4_2:5098100-5098119 | None:intergenic | 45.0% | |
| CTGAATGACAGCATAGACAC+AGG | - | chr4_2:5098527-5098546 | None:intergenic | 45.0% | |
| !!! | GGGAAACCAGTTGGTTTTAG+TGG | + | chr4_2:5098680-5098699 | Msa0584890:intron | 45.0% |
| CCAAAGCCACTAAAACCAAC+TGG | - | chr4_2:5098689-5098708 | None:intergenic | 45.0% | |
| !!! | CCAGTTGGTTTTAGTGGCTT+TGG | + | chr4_2:5098686-5098705 | Msa0584890:intron | 45.0% |
| !!! | GTTGGTTTTAGTGGCTTTGG+GGG | + | chr4_2:5098689-5098708 | Msa0584890:intron | 45.0% |
| ! | GTGCTTCATTTAGGTGCCAT+TGG | + | chr4_2:5098794-5098813 | Msa0584890:intron | 45.0% |
| CATGAACTTACTGGGATCAC+CGG | - | chr4_2:5099031-5099050 | None:intergenic | 45.0% | |
| GAGGTTGCAGACAGTAACAA+TGG | - | chr4_2:5099080-5099099 | None:intergenic | 45.0% | |
| ACAGACTCTACCTTATGAGG+AGG | - | chr4_2:5099099-5099118 | None:intergenic | 45.0% | |
| GTGTGTTTCGGGCACAAATA+GGG | - | chr4_2:5099205-5099224 | None:intergenic | 45.0% | |
| TGTGTGTTTCGGGCACAAAT+AGG | - | chr4_2:5099206-5099225 | None:intergenic | 45.0% | |
| TTTACTGCCTGCTACTCTGA+GGG | + | chr4_2:5099532-5099551 | Msa0584890:intron | 45.0% | |
| TTCAAAACCCTCAGAGTAGC+AGG | - | chr4_2:5099542-5099561 | None:intergenic | 45.0% | |
| AGATGATACTGCAGTACTGC+TGG | - | chr4_2:5099685-5099704 | None:intergenic | 45.0% | |
| ! | TCCTGTTTGTCTGAAGGTAC+CGG | + | chr4_2:5099907-5099926 | Msa0584890:intron | 45.0% |
| TGGACCGTGAGTCTAAATGT+AGG | + | chr4_2:5100091-5100110 | Msa0584890:intron | 45.0% | |
| AGAGAGAAAATGGAGAGGCA+GGG | - | chr4_2:5100818-5100837 | None:intergenic | 45.0% | |
| AAGAGAGAAAATGGAGAGGC+AGG | - | chr4_2:5100819-5100838 | None:intergenic | 45.0% | |
| !! | GAAATAGTGGATAGCGTAGC+GGG | - | chr4_2:5101082-5101101 | None:intergenic | 45.0% |
| TACATGTCCTACTTGTCGTG+GGG | + | chr4_2:5101636-5101655 | Msa0584890:CDS | 45.0% | |
| TAACATTCCCCACGACAAGT+AGG | - | chr4_2:5101646-5101665 | None:intergenic | 45.0% | |
| TTGTCGTGGGGAATGTTATC+AGG | + | chr4_2:5101648-5101667 | Msa0584890:CDS | 45.0% | |
| GTTCCAGGTCAAGAATCTTG+AGG | + | chr4_2:5101756-5101775 | Msa0584890:intron | 45.0% | |
| CATCCTCAAGATTCTTGACC+TGG | - | chr4_2:5101762-5101781 | None:intergenic | 45.0% | |
| AGGATGCTGTTCAAGAGCTT+TGG | + | chr4_2:5101776-5101795 | Msa0584890:CDS | 45.0% | |
| ! | ATGCTGTTCAAGAGCTTTGG+AGG | + | chr4_2:5101779-5101798 | Msa0584890:CDS | 45.0% |
| GGACTCTCTGTCATTCATGA+CGG | + | chr4_2:5102041-5102060 | Msa0584890:CDS | 45.0% | |
| GACTCTCTGTCATTCATGAC+GGG | + | chr4_2:5102042-5102061 | Msa0584890:CDS | 45.0% | |
| !!! | GATGCACGCCATAGTTTTGA+AGG | + | chr4_2:5102072-5102091 | Msa0584890:CDS | 45.0% |
| TCTTGTCCTGTCAATCAGAC+AGG | + | chr4_2:5102207-5102226 | Msa0584890:CDS | 45.0% | |
| CTTGTCCTGTCAATCAGACA+GGG | + | chr4_2:5102208-5102227 | Msa0584890:CDS | 45.0% | |
| ACGCTTGCATTATCAGACAG+TGG | - | chr4_2:5102432-5102451 | None:intergenic | 45.0% | |
| CGTCCAAAGAGATCAAGATC+TGG | + | chr4_2:5102449-5102468 | Msa0584890:CDS | 45.0% | |
| CAAGATCTGGTTACTGCCAA+TGG | + | chr4_2:5102462-5102481 | Msa0584890:CDS | 45.0% | |
| !!! | TTTTAGCTTGAGAAACGGGG+TGG | + | chr4_2:5102536-5102555 | Msa0584890:intron | 45.0% |
| !! | TTTAGCTTGAGAAACGGGGT+GGG | + | chr4_2:5102537-5102556 | Msa0584890:intron | 45.0% |
| !!! | TTTTAGCTTGAGAAACGGGG+TGG | + | chr4_2:5102536-5102555 | Msa0584890:intron | 45.0% |
| !! | TTTAGCTTGAGAAACGGGGT+GGG | + | chr4_2:5102537-5102556 | Msa0584890:intron | 45.0% |
| GTTTGTCCCCATCAAATCAG+TGG | + | chr4_2:5102658-5102677 | Msa0584890:intron | 45.0% | |
| AAATCCAGCCCATTTGACGA+AGG | + | chr4_2:5102877-5102896 | Msa0584890:CDS | 45.0% | |
| AATCCAGCCCATTTGACGAA+GGG | + | chr4_2:5102878-5102897 | Msa0584890:CDS | 45.0% | |
| TTCAACTTCACCTCTGGTAG+AGG | + | chr4_2:5103184-5103203 | Msa0584890:CDS | 45.0% | |
| CTCTGGTAGAGGCAATATGT+CGG | + | chr4_2:5103195-5103214 | Msa0584890:CDS | 45.0% | |
| GTAGAGGCAATATGTCGGAT+GGG | + | chr4_2:5103200-5103219 | Msa0584890:CDS | 45.0% | |
| TAGAGGCAATATGTCGGATG+GGG | + | chr4_2:5103201-5103220 | Msa0584890:CDS | 45.0% | |
| ! | GGTGAAGTTGGTCCTTTAGA+GGG | + | chr4_2:5103223-5103242 | Msa0584890:CDS | 45.0% |
| TAGAGGGATCTCACATCATG+CGG | + | chr4_2:5103239-5103258 | Msa0584890:CDS | 45.0% | |
| TATTTGGCGAAGCAGTCAGA+AGG | + | chr4_2:5103331-5103350 | Msa0584890:CDS | 45.0% | |
| AGAGGAGAAGACCACAATCA+AGG | + | chr4_2:5103483-5103502 | Msa0584890:CDS | 45.0% | |
| GAGGAGAAGACCACAATCAA+GGG | + | chr4_2:5103484-5103503 | Msa0584890:CDS | 45.0% | |
| TCCCCCTCGAAGTAATAATC+TGG | + | chr4_2:5103879-5103898 | Msa0584890:intron | 45.0% | |
| CCCTCGAAGTAATAATCTGG+TGG | + | chr4_2:5103882-5103901 | Msa0584890:intron | 45.0% | |
| AAACCCAAGTTATCCACCCT+TGG | + | chr4_2:5104279-5104298 | Msa0584890:exon | 45.0% | |
| AACCCAAGTTATCCACCCTT+GGG | + | chr4_2:5104280-5104299 | Msa0584890:exon | 45.0% | |
| ATCCCAAGGGTGGATAACTT+GGG | - | chr4_2:5104285-5104304 | None:intergenic | 45.0% | |
| AATCCCAAGGGTGGATAACT+TGG | - | chr4_2:5104286-5104305 | None:intergenic | 45.0% | |
| GCATAAAACAATCCCAAGGG+TGG | - | chr4_2:5104295-5104314 | None:intergenic | 45.0% | |
| AAACCCAAGTTATCCACCCT+TGG | + | chr4_2:5104279-5104298 | Msa0584890:exon | 45.0% | |
| AACCCAAGTTATCCACCCTT+GGG | + | chr4_2:5104280-5104299 | Msa0584890:exon | 45.0% | |
| ATCCCAAGGGTGGATAACTT+GGG | - | chr4_2:5104285-5104304 | None:intergenic | 45.0% | |
| AATCCCAAGGGTGGATAACT+TGG | - | chr4_2:5104286-5104305 | None:intergenic | 45.0% | |
| CCAAAAACCAGCAGCAATCT+GGG | - | chr4_2:5104436-5104455 | None:intergenic | 45.0% | |
| !!! | CCAGATTGCTGCTGGTTTTT+GGG | + | chr4_2:5104434-5104453 | Msa0584890:three_prime_UTR | 45.0% |
| TGCAGTTCAGAAAAGGGCTT+CGG | - | chr4_2:5104516-5104535 | None:intergenic | 45.0% | |
| AATGGTGGCCTGTACATAAC+AGG | - | chr4_2:5104618-5104637 | None:intergenic | 45.0% | |
| GGCCACCATTACTGTAGAAT+AGG | + | chr4_2:5104628-5104647 | Msa0584890:three_prime_UTR | 45.0% | |
| CCCTCCCTATTCTACAGTAA+TGG | - | chr4_2:5104636-5104655 | None:intergenic | 45.0% | |
| !!! | AATTGAATTTTAATATATAT+GGG | - | chr4_2:5096423-5096442 | None:intergenic | 5.0% |
| !!! | TTTTACATAATATATAAAAA+GGG | - | chr4_2:5096447-5096466 | None:intergenic | 5.0% |
| !!! | ATTTTACATAATATATAAAA+AGG | - | chr4_2:5096448-5096467 | None:intergenic | 5.0% |
| !! | ATATATATATATATATATGT+CGG | - | chr4_2:5098842-5098861 | None:intergenic | 5.0% |
| AGTAAGTAAAGGCGACGTCG+TGG | - | chr4_2:5096360-5096379 | None:intergenic | 50.0% | |
| TTCGTTCCGTTCAGAGAACG+CGG | - | chr4_2:5096782-5096801 | None:intergenic | 50.0% | |
| GGTGATTCACGGAAGGAAGA+TGG | + | chr4_2:5096854-5096873 | Msa0584890:CDS | 50.0% | |
| GATTCACGGAAGGAAGATGG+TGG | + | chr4_2:5096857-5096876 | Msa0584890:CDS | 50.0% | |
| ! | ATTGTTGCTGTTAGCGGTGG+TGG | + | chr4_2:5096929-5096948 | Msa0584890:CDS | 50.0% |
| TGCTGCTATGATTGCTGCTG+AGG | + | chr4_2:5097027-5097046 | Msa0584890:CDS | 50.0% | |
| ! | TTGCTGCTGAGGAGTATGCT+AGG | + | chr4_2:5097038-5097057 | Msa0584890:CDS | 50.0% |
| GCTTGAATCTGGCGATGTTG+TGG | + | chr4_2:5097063-5097082 | Msa0584890:CDS | 50.0% | |
| ! | GTGTTGTCGGTTGCGAATTG+CGG | + | chr4_2:5097297-5097316 | Msa0584890:intron | 50.0% |
| !! | TTCGCAACTGACTTGCACAG+CGG | - | chr4_2:5097344-5097363 | None:intergenic | 50.0% |
| CCATATGCAGACCGGTATGT+CGG | + | chr4_2:5097552-5097571 | Msa0584890:intron | 50.0% | |
| !! | ATGTTGTCGATAGCGGACCA+CGG | - | chr4_2:5097593-5097612 | None:intergenic | 50.0% |
| !!! | TGACCGGTGGTTTTATGTGC+AGG | + | chr4_2:5097853-5097872 | Msa0584890:intron | 50.0% |
| TGCAATCGTGTCGAGAACGA+AGG | + | chr4_2:5097941-5097960 | Msa0584890:CDS | 50.0% | |
| CCTCACAAATTCGGCAAGCA+CGG | - | chr4_2:5098163-5098182 | None:intergenic | 50.0% | |
| GCTTCATCTAGGCTTGCAGA+AGG | + | chr4_2:5099004-5099023 | Msa0584890:intron | 50.0% | |
| ATCTAGGCTTGCAGAAGGAC+CGG | + | chr4_2:5099009-5099028 | Msa0584890:intron | 50.0% | |
| CTGTCTGCAACCTCCTCATA+AGG | + | chr4_2:5099086-5099105 | Msa0584890:CDS | 50.0% | |
| TAGTCCATTCCCAGGGACAT+TGG | - | chr4_2:5099248-5099267 | None:intergenic | 50.0% | |
| TCACGCTTAGTCCATTCCCA+GGG | - | chr4_2:5099255-5099274 | None:intergenic | 50.0% | |
| CTTTACTGCCTGCTACTCTG+AGG | + | chr4_2:5099531-5099550 | Msa0584890:intron | 50.0% | |
| TACACGTGCTGTGATGCATG+TGG | + | chr4_2:5099857-5099876 | Msa0584890:CDS | 50.0% | |
| ACCGGTACCTTCAGACAAAC+AGG | - | chr4_2:5099911-5099930 | None:intergenic | 50.0% | |
| CTGTGATCATTGCCAACGCT+GGG | + | chr4_2:5100415-5100434 | Msa0584890:CDS | 50.0% | |
| TAGCACATCAGCTTTCGTCG+TGG | - | chr4_2:5100555-5100574 | None:intergenic | 50.0% | |
| GAGAGAAAATGGAGAGGCAG+GGG | - | chr4_2:5100817-5100836 | None:intergenic | 50.0% | |
| TGACTCAAGCTTCCAGTAGC+AGG | - | chr4_2:5102177-5102196 | None:intergenic | 50.0% | |
| GGTGAAGAGAGTGGAAAACG+TGG | + | chr4_2:5102330-5102349 | Msa0584890:CDS | 50.0% | |
| TTTCCCTTCGTCAAATGGGC+TGG | - | chr4_2:5102884-5102903 | None:intergenic | 50.0% | |
| GGAGCAGCTGGACATATTGA+TGG | + | chr4_2:5102929-5102948 | Msa0584890:CDS | 50.0% | |
| CGACATATTGCCTCTACCAG+AGG | - | chr4_2:5103197-5103216 | None:intergenic | 50.0% | |
| GGTAGAGGCAATATGTCGGA+TGG | + | chr4_2:5103199-5103218 | Msa0584890:CDS | 50.0% | |
| AGAGGCAATATGTCGGATGG+GGG | + | chr4_2:5103202-5103221 | Msa0584890:CDS | 50.0% | |
| ! | GGGTGAAGTTGGTCCTTTAG+AGG | + | chr4_2:5103222-5103241 | Msa0584890:CDS | 50.0% |
| AGAGGGATCTCACATCATGC+GGG | + | chr4_2:5103240-5103259 | Msa0584890:CDS | 50.0% | |
| CGGGGAAAACGTAGTACTCA+TGG | + | chr4_2:5103259-5103278 | Msa0584890:CDS | 50.0% | |
| GGATTAGGTGCAACGTCAAG+AGG | + | chr4_2:5103298-5103317 | Msa0584890:CDS | 50.0% | |
| GTGCAACGTCAAGAGGTGAA+AGG | + | chr4_2:5103305-5103324 | Msa0584890:CDS | 50.0% | |
| TCAAGGGCCAGAGGTCAAAA+AGG | + | chr4_2:5103500-5103519 | Msa0584890:CDS | 50.0% | |
| GCCAGAGGTCAAAAAGGAAG+AGG | + | chr4_2:5103506-5103525 | Msa0584890:CDS | 50.0% | |
| ! | GCCTCTTCCTTTTTGACCTC+TGG | - | chr4_2:5103510-5103529 | None:intergenic | 50.0% |
| ! | GAAGGTGCAAGTCAATCTCC+TGG | + | chr4_2:5103601-5103620 | Msa0584890:CDS | 50.0% |
| GAGGTGACTGGTGTAGTTGA+AGG | + | chr4_2:5104149-5104168 | Msa0584890:CDS | 50.0% | |
| AAAACCAGCAGCAATCTGGG+CGG | - | chr4_2:5104433-5104452 | None:intergenic | 50.0% | |
| !!! | CCCAGATTGCTGCTGGTTTT+TGG | + | chr4_2:5104433-5104452 | Msa0584890:three_prime_UTR | 50.0% |
| CCCAAAAACCAGCAGCAATC+TGG | - | chr4_2:5104437-5104456 | None:intergenic | 50.0% | |
| GTTCAGAAAAGGGCTTCGGT+AGG | - | chr4_2:5104512-5104531 | None:intergenic | 50.0% | |
| ! | GAAGCCCTTTTCTGAACTGC+AGG | + | chr4_2:5104515-5104534 | Msa0584890:three_prime_UTR | 50.0% |
| GGGTTTCCGCGTTCTCTGAA+CGG | + | chr4_2:5096773-5096792 | Msa0584890:CDS | 55.0% | |
| ! | TCAAGTTGCGGTGCCGAAAG+TGG | + | chr4_2:5096886-5096905 | Msa0584890:CDS | 55.0% |
| ACAGCAACAATTTCCGGCGG+CGG | - | chr4_2:5096920-5096939 | None:intergenic | 55.0% | |
| ! | CTGCTGAGGAGTATGCTAGG+AGG | + | chr4_2:5097041-5097060 | Msa0584890:CDS | 55.0% |
| TATCTGCTGTGGCATCGCCA+TGG | - | chr4_2:5097471-5097490 | None:intergenic | 55.0% | |
| CCGACATACCGGTCTGCATA+TGG | - | chr4_2:5097555-5097574 | None:intergenic | 55.0% | |
| !!! | GGTTTTTTGGCCTTTCGCCG+TGG | + | chr4_2:5097573-5097592 | Msa0584890:intron | 55.0% |
| ACAAATTCGGCAAGCACGGC+AGG | - | chr4_2:5098159-5098178 | None:intergenic | 55.0% | |
| CCGTGCTTGCCGAATTTGTG+AGG | + | chr4_2:5098160-5098179 | Msa0584890:CDS | 55.0% | |
| GGTGACTGCATCAACGCCAA+TGG | - | chr4_2:5098813-5098832 | None:intergenic | 55.0% | |
| AGTTGCGCATCCAATGTCCC+TGG | + | chr4_2:5099235-5099254 | Msa0584890:CDS | 55.0% | |
| GTTGCGCATCCAATGTCCCT+GGG | + | chr4_2:5099236-5099255 | Msa0584890:CDS | 55.0% | |
| GCATCCAATGTCCCTGGGAA+TGG | + | chr4_2:5099241-5099260 | Msa0584890:CDS | 55.0% | |
| CTCACGCTTAGTCCATTCCC+AGG | - | chr4_2:5099256-5099275 | None:intergenic | 55.0% | |
| !! | CTGGGAATGGACTAAGCGTG+AGG | + | chr4_2:5099254-5099273 | Msa0584890:CDS | 55.0% |
| GCTGTGATCATTGCCAACGC+TGG | + | chr4_2:5100414-5100433 | Msa0584890:CDS | 55.0% | |
| ACTGGCAATGTACCCAGCGT+TGG | - | chr4_2:5100430-5100449 | None:intergenic | 55.0% | |
| !! | GCTTTTTGCATCGGCGACTG+TGG | + | chr4_2:5100606-5100625 | Msa0584890:intron | 55.0% |
| TGGGTGACGACTGACGAGAT+GGG | + | chr4_2:5100741-5100760 | Msa0584890:intron | 55.0% | |
| AGAAAATGGAGAGGCAGGGG+TGG | - | chr4_2:5100814-5100833 | None:intergenic | 55.0% | |
| TATGTCCAGCTGCTCCATCG+TGG | - | chr4_2:5102925-5102944 | None:intergenic | 55.0% | |
| ATGTCGGATGGGGGTGAAGT+TGG | + | chr4_2:5103211-5103230 | Msa0584890:CDS | 55.0% | |
| GAGGGATCTCACATCATGCG+GGG | + | chr4_2:5103241-5103260 | Msa0584890:CDS | 55.0% | |
| AGACCACAATCAAGGGCCAG+AGG | + | chr4_2:5103491-5103510 | Msa0584890:CDS | 55.0% | |
| TGACCTCTGGCCCTTGATTG+TGG | - | chr4_2:5103497-5103516 | None:intergenic | 55.0% | |
| TTTGTCCAGGCACAAGGGAG+AGG | + | chr4_2:5104130-5104149 | Msa0584890:intron | 55.0% | |
| AATAGGGAGGGATGTGCCCT+AGG | + | chr4_2:5104645-5104664 | Msa0584890:three_prime_UTR | 55.0% | |
| AAGGCGACGTCGTGGAGATG+AGG | - | chr4_2:5096352-5096371 | None:intergenic | 60.0% | |
| CGGAACGAAGAACGCGACGA+AGG | + | chr4_2:5096793-5096812 | Msa0584890:CDS | 60.0% | |
| ! | GTTGCTGTTAGCGGTGGTGG+TGG | + | chr4_2:5096932-5096951 | Msa0584890:CDS | 60.0% |
| !! | TGGTGGTGGTGGTGGTGATG+TGG | + | chr4_2:5096949-5096968 | Msa0584890:CDS | 60.0% |
| TGCATATGGCGTCGTGGCAC+TGG | - | chr4_2:5097541-5097560 | None:intergenic | 60.0% | |
| CCACGACGCCATATGCAGAC+CGG | + | chr4_2:5097544-5097563 | Msa0584890:intron | 60.0% | |
| GTGGGTGACGACTGACGAGA+TGG | + | chr4_2:5100740-5100759 | Msa0584890:intron | 60.0% | |
| GGGTGACGACTGACGAGATG+GGG | + | chr4_2:5100742-5100761 | Msa0584890:intron | 60.0% | |
| GATAGCCACGATGGAGCAGC+TGG | + | chr4_2:5102917-5102936 | Msa0584890:CDS | 60.0% | |
| AGTCACCTCTCCCTTGTGCC+TGG | - | chr4_2:5104138-5104157 | None:intergenic | 60.0% | |
| AGGCACAAGGGAGAGGTGAC+TGG | + | chr4_2:5104137-5104156 | Msa0584890:intron | 60.0% | |
| TTAGCCGCCCAGATTGCTGC+TGG | + | chr4_2:5104426-5104445 | Msa0584890:three_prime_UTR | 60.0% | |
| GCAACAATTTCCGGCGGCGG+CGG | - | chr4_2:5096917-5096936 | None:intergenic | 65.0% | |
| !! | GCTGTTAGCGGTGGTGGTGG+TGG | + | chr4_2:5096935-5096954 | Msa0584890:CDS | 65.0% |
| !! | GTTAGCGGTGGTGGTGGTGG+TGG | + | chr4_2:5096938-5096957 | Msa0584890:CDS | 65.0% |
| CCGGTCTGCATATGGCGTCG+TGG | - | chr4_2:5097547-5097566 | None:intergenic | 65.0% | |
| !! | CGATAGCGGACCACGGCGAA+AGG | - | chr4_2:5097586-5097605 | None:intergenic | 65.0% |
| ACCAGCTTGAGGGCTGCAGC+TGG | + | chr4_2:5101832-5101851 | Msa0584890:CDS | 65.0% | |
| ACCAGCTGCAGCCCTCAAGC+TGG | - | chr4_2:5101836-5101855 | None:intergenic | 65.0% | |
| GGCGGCGGTGGCACCACTTT+CGG | - | chr4_2:5096902-5096921 | None:intergenic | 70.0% | |
| ACAATTTCCGGCGGCGGCGG+TGG | - | chr4_2:5096914-5096933 | None:intergenic | 70.0% | |
| !! | AGCGGTGGTGGTGGTGGTGG+TGG | + | chr4_2:5096941-5096960 | Msa0584890:CDS | 70.0% |
| !!! | AGTGGTGCCACCGCCGCCGC+CGG | + | chr4_2:5096904-5096923 | Msa0584890:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 5096349 | 5104788 | 5096349 | ID=Msa0584890;Name=Msa0584890 |
| chr4_2 | mRNA | 5096349 | 5104788 | 5096349 | ID=Msa0584890-mRNA-1;Parent=Msa0584890;Name=Msa0584890-mRNA-1;_AED=0.05;_eAED=0.05;_QI=228|1|1|1|0.76|0.78|14|464|871 |
| chr4_2 | exon | 5096349 | 5096608 | 5096349 | ID=Msa0584890-mRNA-1:exon:1249;Parent=Msa0584890-mRNA-1 |
| chr4_2 | exon | 5096748 | 5097084 | 5096748 | ID=Msa0584890-mRNA-1:exon:1250;Parent=Msa0584890-mRNA-1 |
| chr4_2 | exon | 5097875 | 5098052 | 5097875 | ID=Msa0584890-mRNA-1:exon:1251;Parent=Msa0584890-mRNA-1 |
| chr4_2 | exon | 5098132 | 5098181 | 5098132 | ID=Msa0584890-mRNA-1:exon:1252;Parent=Msa0584890-mRNA-1 |
| chr4_2 | exon | 5099015 | 5099107 | 5099015 | ID=Msa0584890-mRNA-1:exon:1253;Parent=Msa0584890-mRNA-1 |
| chr4_2 | exon | 5099187 | 5099275 | 5099187 | ID=Msa0584890-mRNA-1:exon:1254;Parent=Msa0584890-mRNA-1 |
| chr4_2 | exon | 5099844 | 5099922 | 5099844 | ID=Msa0584890-mRNA-1:exon:1255;Parent=Msa0584890-mRNA-1 |
| chr4_2 | exon | 5100380 | 5100462 | 5100380 | ID=Msa0584890-mRNA-1:exon:1256;Parent=Msa0584890-mRNA-1 |
| chr4_2 | exon | 5101591 | 5101669 | 5101591 | ID=Msa0584890-mRNA-1:exon:1257;Parent=Msa0584890-mRNA-1 |
| chr4_2 | exon | 5101763 | 5102483 | 5101763 | ID=Msa0584890-mRNA-1:exon:1258;Parent=Msa0584890-mRNA-1 |
| chr4_2 | exon | 5102870 | 5102956 | 5102870 | ID=Msa0584890-mRNA-1:exon:1259;Parent=Msa0584890-mRNA-1 |
| chr4_2 | exon | 5103086 | 5103731 | 5103086 | ID=Msa0584890-mRNA-1:exon:1260;Parent=Msa0584890-mRNA-1 |
| chr4_2 | exon | 5104139 | 5104301 | 5104139 | ID=Msa0584890-mRNA-1:exon:1261;Parent=Msa0584890-mRNA-1 |
| chr4_2 | exon | 5104346 | 5104788 | 5104346 | ID=Msa0584890-mRNA-1:exon:1262;Parent=Msa0584890-mRNA-1 |
| chr4_2 | five_prime_UTR | 5096349 | 5096576 | 5096349 | ID=Msa0584890-mRNA-1:five_prime_utr;Parent=Msa0584890-mRNA-1 |
| chr4_2 | CDS | 5096577 | 5096608 | 5096577 | ID=Msa0584890-mRNA-1:cds;Parent=Msa0584890-mRNA-1 |
| chr4_2 | CDS | 5096748 | 5097084 | 5096748 | ID=Msa0584890-mRNA-1:cds;Parent=Msa0584890-mRNA-1 |
| chr4_2 | CDS | 5097875 | 5098052 | 5097875 | ID=Msa0584890-mRNA-1:cds;Parent=Msa0584890-mRNA-1 |
| chr4_2 | CDS | 5098132 | 5098181 | 5098132 | ID=Msa0584890-mRNA-1:cds;Parent=Msa0584890-mRNA-1 |
| chr4_2 | CDS | 5099015 | 5099107 | 5099015 | ID=Msa0584890-mRNA-1:cds;Parent=Msa0584890-mRNA-1 |
| chr4_2 | CDS | 5099187 | 5099275 | 5099187 | ID=Msa0584890-mRNA-1:cds;Parent=Msa0584890-mRNA-1 |
| chr4_2 | CDS | 5099844 | 5099922 | 5099844 | ID=Msa0584890-mRNA-1:cds;Parent=Msa0584890-mRNA-1 |
| chr4_2 | CDS | 5100380 | 5100462 | 5100380 | ID=Msa0584890-mRNA-1:cds;Parent=Msa0584890-mRNA-1 |
| chr4_2 | CDS | 5101591 | 5101669 | 5101591 | ID=Msa0584890-mRNA-1:cds;Parent=Msa0584890-mRNA-1 |
| chr4_2 | CDS | 5101763 | 5102483 | 5101763 | ID=Msa0584890-mRNA-1:cds;Parent=Msa0584890-mRNA-1 |
| chr4_2 | CDS | 5102870 | 5102956 | 5102870 | ID=Msa0584890-mRNA-1:cds;Parent=Msa0584890-mRNA-1 |
| chr4_2 | CDS | 5103086 | 5103731 | 5103086 | ID=Msa0584890-mRNA-1:cds;Parent=Msa0584890-mRNA-1 |
| chr4_2 | CDS | 5104139 | 5104280 | 5104139 | ID=Msa0584890-mRNA-1:cds;Parent=Msa0584890-mRNA-1 |
| chr4_2 | three_prime_UTR | 5104281 | 5104301 | 5104281 | ID=Msa0584890-mRNA-1:three_prime_utr;Parent=Msa0584890-mRNA-1 |
| chr4_2 | three_prime_UTR | 5104346 | 5104788 | 5104346 | ID=Msa0584890-mRNA-1:three_prime_utr;Parent=Msa0584890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
