Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672570 | XP_003605489.2 | 98.298 | 235 | 4 | 0 | 1 | 235 | 1 | 235 | 7.69e-167 | 474 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672570 | sp|F4HT21|IAN9_ARATH | 62.821 | 234 | 77 | 2 | 2 | 235 | 6 | 229 | 5.50e-93 | 279 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672570 | G7JN49 | 98.298 | 235 | 4 | 0 | 1 | 235 | 1 | 235 | 3.67e-167 | 474 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002460 | Msa0672570 | 0.812327 | 4.481838e-51 | -8.615850e-47 |
| Msa0003890 | Msa0672570 | 0.808709 | 2.710718e-50 | -8.615850e-47 |
| Msa0006070 | Msa0672570 | 0.812391 | 4.339898e-51 | -8.615850e-47 |
| Msa0006110 | Msa0672570 | 0.842576 | 2.377084e-58 | -8.615850e-47 |
| Msa0011170 | Msa0672570 | 0.816789 | 4.613039e-52 | -8.615850e-47 |
| Msa0012040 | Msa0672570 | 0.800874 | 1.174575e-48 | -8.615850e-47 |
| Msa0014710 | Msa0672570 | 0.803533 | 3.330911e-49 | -8.615850e-47 |
| Msa0023090 | Msa0672570 | 0.811345 | 7.332765e-51 | -8.615850e-47 |
| Msa0036140 | Msa0672570 | 0.819158 | 1.345268e-52 | -8.615850e-47 |
| Msa0043980 | Msa0672570 | 0.818512 | 1.886180e-52 | -8.615850e-47 |
| Msa0046160 | Msa0672570 | 0.801404 | 9.150189e-49 | -8.615850e-47 |
| Msa0054480 | Msa0672570 | 0.812351 | 4.428123e-51 | -8.615850e-47 |
| Msa0065950 | Msa0672570 | 0.810846 | 9.406509e-51 | -8.615850e-47 |
| Msa0079400 | Msa0672570 | 0.804050 | 2.601699e-49 | -8.615850e-47 |
| Msa0089380 | Msa0672570 | 0.803279 | 3.760635e-49 | -8.615850e-47 |
| Msa0089790 | Msa0672570 | 0.808277 | 3.351926e-50 | -8.615850e-47 |
| Msa0095560 | Msa0672570 | 0.803702 | 3.072421e-49 | -8.615850e-47 |
| Msa0103190 | Msa0672570 | 0.813781 | 2.151276e-51 | -8.615850e-47 |
| Msa0607050 | Msa0672570 | 0.807550 | 4.786012e-50 | -8.615850e-47 |
| Msa0610430 | Msa0672570 | 0.827367 | 1.627314e-54 | -8.615850e-47 |
| Msa0611800 | Msa0672570 | 0.802701 | 4.950463e-49 | -8.615850e-47 |
| Msa0623070 | Msa0672570 | 0.808996 | 2.353260e-50 | -8.615850e-47 |
| Msa0625720 | Msa0672570 | 0.812066 | 5.112135e-51 | -8.615850e-47 |
| Msa0634700 | Msa0672570 | 0.830241 | 3.280729e-55 | -8.615850e-47 |
| Msa0657970 | Msa0672570 | 0.834613 | 2.708807e-56 | -8.615850e-47 |
| Msa0660300 | Msa0672570 | 0.803872 | 2.832514e-49 | -8.615850e-47 |
| Msa0661650 | Msa0672570 | 0.814206 | 1.733296e-51 | -8.615850e-47 |
| Msa0663390 | Msa0672570 | 0.816245 | 6.109319e-52 | -8.615850e-47 |
| Msa0663810 | Msa0672570 | 0.801190 | 1.012151e-48 | -8.615850e-47 |
| Msa0672570 | Msa0673450 | 0.834698 | 2.578138e-56 | -8.615850e-47 |
| Msa0672570 | Msa0673460 | 0.882030 | 1.466109e-70 | -8.615850e-47 |
| Msa0672570 | Msa0681250 | 0.807055 | 6.092336e-50 | -8.615850e-47 |
| Msa0672570 | Msa0681270 | 0.810372 | 1.191377e-50 | -8.615850e-47 |
| Msa0672570 | Msa0682550 | 0.807786 | 4.264354e-50 | -8.615850e-47 |
| Msa0672570 | Msa0685750 | 0.813102 | 3.032949e-51 | -8.615850e-47 |
| Msa0672570 | Msa0688070 | 0.810353 | 1.202614e-50 | -8.615850e-47 |
| Msa0672570 | Msa0691010 | 0.811010 | 8.669686e-51 | -8.615850e-47 |
| Msa0672570 | Msa0692040 | -0.812396 | 4.331035e-51 | -8.615850e-47 |
| Msa0672570 | Msa0692950 | 0.802533 | 5.363776e-49 | -8.615850e-47 |
| Msa0672570 | Msa0693380 | 0.821189 | 4.609420e-53 | -8.615850e-47 |
| Msa0672570 | Msa0693650 | 0.812043 | 5.169437e-51 | -8.615850e-47 |
| Msa0672570 | Msa0697030 | 0.801660 | 8.107232e-49 | -8.615850e-47 |
| Msa0672570 | Msa0716960 | 0.821266 | 4.424673e-53 | -8.615850e-47 |
| Msa0672570 | Msa0717010 | 0.830090 | 3.571400e-55 | -8.615850e-47 |
| Msa0672570 | Msa0717020 | 0.817022 | 4.090929e-52 | -8.615850e-47 |
| Msa0672570 | Msa0731180 | 0.808095 | 3.665529e-50 | -8.615850e-47 |
| Msa0672570 | Msa0740510 | 0.825941 | 3.561741e-54 | -8.615850e-47 |
| Msa0672570 | Msa0749290 | 0.807550 | 4.784919e-50 | -8.615850e-47 |
| Msa0672570 | Msa0759410 | 0.804184 | 2.440009e-49 | -8.615850e-47 |
| Msa0672570 | Msa0763400 | 0.809479 | 1.854641e-50 | -8.615850e-47 |
| Msa0672570 | Msa0764830 | 0.809875 | 1.524465e-50 | -8.615850e-47 |
| Msa0672570 | Msa0775190 | 0.800360 | 1.494617e-48 | -8.615850e-47 |
| Msa0672570 | Msa0790510 | 0.806306 | 8.770799e-50 | -8.615850e-47 |
| Msa0672570 | Msa0795080 | 0.802796 | 4.732732e-49 | -8.615850e-47 |
| Msa0672570 | Msa0798430 | 0.803564 | 3.282654e-49 | -8.615850e-47 |
| Msa0672570 | Msa0798860 | 0.826337 | 2.867302e-54 | -8.615850e-47 |
| Msa0672570 | Msa0820770 | 0.829815 | 4.167230e-55 | -8.615850e-47 |
| Msa0672570 | Msa0820850 | 0.822009 | 2.978173e-53 | -8.615850e-47 |
| Msa0672570 | Msa0832340 | 0.828729 | 7.645094e-55 | -8.615850e-47 |
| Msa0672570 | Msa0835230 | 0.801651 | 8.143815e-49 | -8.615850e-47 |
| Msa0672570 | Msa0842650 | 0.801693 | 7.983190e-49 | -8.615850e-47 |
| Msa0672570 | Msa0844570 | 0.827476 | 1.532157e-54 | -8.615850e-47 |
| Msa0672570 | Msa0860410 | 0.802293 | 6.008139e-49 | -8.615850e-47 |
| Msa0672570 | Msa0861090 | 0.827325 | 1.664988e-54 | -8.615850e-47 |
| Msa0672570 | Msa0861130 | 0.831070 | 2.056359e-55 | -8.615850e-47 |
| Msa0672570 | Msa0876580 | 0.807604 | 4.660237e-50 | -8.615850e-47 |
| Msa0672570 | Msa0896750 | 0.815971 | 7.034136e-52 | -8.615850e-47 |
| Msa0672570 | Msa0910000 | 0.803051 | 4.191271e-49 | -8.615850e-47 |
| Msa0672570 | Msa0923330 | 0.805231 | 1.474815e-49 | -8.615850e-47 |
| Msa0672570 | Msa0933100 | 0.836362 | 9.781321e-57 | -8.615850e-47 |
| Msa0672570 | Msa0954920 | 0.807180 | 5.734117e-50 | -8.615850e-47 |
| Msa0672570 | Msa0958920 | 0.833524 | 5.076703e-56 | -8.615850e-47 |
| Msa0672570 | Msa0969450 | 0.808009 | 3.822199e-50 | -8.615850e-47 |
| Msa0672570 | Msa0969520 | 0.822904 | 1.845363e-53 | -8.615850e-47 |
| Msa0672570 | Msa0989220 | 0.803157 | 3.986672e-49 | -8.615850e-47 |
| Msa0672570 | Msa0999220 | 0.813114 | 3.015617e-51 | -8.615850e-47 |
| Msa0672570 | Msa1003620 | 0.804220 | 2.397863e-49 | -8.615850e-47 |
| Msa0672570 | Msa1014540 | 0.816348 | 5.793088e-52 | -8.615850e-47 |
| Msa0672570 | Msa1019000 | 0.815999 | 6.932075e-52 | -8.615850e-47 |
| Msa0672570 | Msa1019150 | 0.819561 | 1.088950e-52 | -8.615850e-47 |
| Msa0672570 | Msa1023920 | 0.802903 | 4.498824e-49 | -8.615850e-47 |
| Msa0672570 | Msa1030970 | 0.805847 | 1.095704e-49 | -8.615850e-47 |
| Msa0672570 | Msa1054990 | 0.800619 | 1.323732e-48 | -8.615850e-47 |
| Msa0672570 | Msa1059570 | 0.814196 | 1.742402e-51 | -8.615850e-47 |
| Msa0672570 | Msa1071110 | 0.807868 | 4.095441e-50 | -8.615850e-47 |
| Msa0672570 | Msa1075540 | 0.806673 | 7.339389e-50 | -8.615850e-47 |
| Msa0672570 | Msa1075650 | 0.816125 | 6.497329e-52 | -8.615850e-47 |
| Msa0672570 | Msa1082500 | 0.864971 | 8.281149e-65 | -8.615850e-47 |
| Msa0672570 | Msa1085200 | 0.812729 | 3.661101e-51 | -8.615850e-47 |
| Msa0672570 | Msa1088950 | 0.805210 | 1.490036e-49 | -8.615850e-47 |
| Msa0672570 | Msa1090260 | 0.813667 | 2.279694e-51 | -8.615850e-47 |
| Msa0672570 | Msa1091830 | 0.803118 | 4.060415e-49 | -8.615850e-47 |
| Msa0672570 | Msa1098400 | 0.826120 | 3.229626e-54 | -8.615850e-47 |
| Msa0672570 | Msa1098420 | 0.814824 | 1.265150e-51 | -8.615850e-47 |
| Msa0672570 | Msa1100050 | 0.813579 | 2.382631e-51 | -8.615850e-47 |
| Msa0672570 | Msa1107900 | 0.803249 | 3.814768e-49 | -8.615850e-47 |
| Msa0672570 | Msa1129550 | 0.820347 | 7.197511e-53 | -8.615850e-47 |
| Msa0672570 | Msa1129730 | 0.809701 | 1.661002e-50 | -8.615850e-47 |
| Msa0672570 | Msa1131220 | 0.810146 | 1.332306e-50 | -8.615850e-47 |
| Msa0672570 | Msa1135470 | 0.825387 | 4.818755e-54 | -8.615850e-47 |
| Msa0672570 | Msa1143270 | 0.825935 | 3.572958e-54 | -8.615850e-47 |
| Msa0672570 | Msa1147740 | 0.815402 | 9.416709e-52 | -8.615850e-47 |
| Msa0672570 | Msa1152990 | 0.800272 | 1.558135e-48 | -8.615850e-47 |
| Msa0672570 | Msa1172670 | 0.815397 | 9.440810e-52 | -8.615850e-47 |
| Msa0672570 | Msa1174040 | 0.824862 | 6.412702e-54 | -8.615850e-47 |
| Msa0672570 | Msa1185980 | 0.803172 | 3.957031e-49 | -8.615850e-47 |
| Msa0672570 | Msa1199570 | 0.813815 | 2.114487e-51 | -8.615850e-47 |
| Msa0672570 | Msa1199620 | 0.801586 | 8.397092e-49 | -8.615850e-47 |
| Msa0672570 | Msa1204530 | 0.814198 | 1.740820e-51 | -8.615850e-47 |
| Msa0672570 | Msa1207220 | 0.805266 | 1.450301e-49 | -8.615850e-47 |
| Msa0672570 | Msa1212940 | 0.804190 | 2.433155e-49 | -8.615850e-47 |
| Msa0672570 | Msa1221050 | 0.801561 | 8.495512e-49 | -8.615850e-47 |
| Msa0672570 | Msa1222840 | -0.800768 | 1.234469e-48 | -8.615850e-47 |
| Msa0672570 | Msa1224480 | 0.812072 | 5.095999e-51 | -8.615850e-47 |
| Msa0672570 | Msa1233890 | 0.800845 | 1.190547e-48 | -8.615850e-47 |
| Msa0672570 | Msa1267430 | 0.801978 | 6.975773e-49 | -8.615850e-47 |
| Msa0672570 | Msa1284680 | 0.823930 | 1.062505e-53 | -8.615850e-47 |
| Msa0672570 | Msa1292400 | 0.806967 | 6.360328e-50 | -8.615850e-47 |
| Msa0672570 | Msa1296760 | 0.811576 | 6.535169e-51 | -8.615850e-47 |
| Msa0672570 | Msa1305340 | 0.808723 | 2.691771e-50 | -8.615850e-47 |
| Msa0672570 | Msa1306750 | 0.805413 | 1.351186e-49 | -8.615850e-47 |
| Msa0672570 | Msa1306850 | 0.811312 | 7.456971e-51 | -8.615850e-47 |
| Msa0672570 | Msa1313150 | 0.804152 | 2.478060e-49 | -8.615850e-47 |
| Msa0672570 | Msa1314170 | 0.810379 | 1.186932e-50 | -8.615850e-47 |
| Msa0672570 | Msa1314340 | 0.835857 | 1.314420e-56 | -8.615850e-47 |
| Msa0672570 | Msa1328710 | 0.810796 | 9.645625e-51 | -8.615850e-47 |
| Msa0672570 | Msa1331000 | 0.838971 | 2.094011e-57 | -8.615850e-47 |
| Msa0672570 | Msa1331320 | 0.822280 | 2.577423e-53 | -8.615850e-47 |
| Msa0672570 | Msa1353470 | 0.813977 | 1.947615e-51 | -8.615850e-47 |
| Msa0672570 | Msa1359040 | 0.816291 | 5.963776e-52 | -8.615850e-47 |
| Msa0672570 | Msa1360060 | 0.804564 | 2.033413e-49 | -8.615850e-47 |
| Msa0672570 | Msa1372760 | 0.826915 | 2.087135e-54 | -8.615850e-47 |
| Msa0672570 | Msa1373030 | 0.805270 | 1.447935e-49 | -8.615850e-47 |
| Msa0672570 | Msa1374470 | 0.816216 | 6.201103e-52 | -8.615850e-47 |
| Msa0672570 | Msa1384330 | 0.806199 | 9.235490e-50 | -8.615850e-47 |
| Msa0672570 | Msa1390050 | 0.807586 | 4.702280e-50 | -8.615850e-47 |
| Msa0672570 | Msa1392260 | 0.822177 | 2.723626e-53 | -8.615850e-47 |
| Msa0672570 | Msa1397120 | 0.805989 | 1.022583e-49 | -8.615850e-47 |
| Msa0672570 | Msa1403890 | 0.802534 | 5.360155e-49 | -8.615850e-47 |
| Msa0672570 | Msa1407060 | 0.817134 | 3.860502e-52 | -8.615850e-47 |
| Msa0672570 | Msa1409870 | 0.801748 | 7.777586e-49 | -8.615850e-47 |
| Msa0672570 | Msa1415910 | 0.810943 | 8.962582e-51 | -8.615850e-47 |
| Msa0672570 | Msa1420140 | 0.814290 | 1.661454e-51 | -8.615850e-47 |
| Msa0672570 | Msa1423880 | 0.806494 | 8.007074e-50 | -8.615850e-47 |
| Msa0672570 | Msa1424680 | 0.808319 | 3.283904e-50 | -8.615850e-47 |
| Msa0672570 | Msa1427230 | 0.805903 | 1.066046e-49 | -8.615850e-47 |
| Msa0672570 | Msa1429900 | 0.826944 | 2.054120e-54 | -8.615850e-47 |
| Msa0672570 | Msa1435270 | 0.819134 | 1.362245e-52 | -8.615850e-47 |
| Msa0672570 | Msa1452240 | 0.814526 | 1.472905e-51 | -8.615850e-47 |
| Msa0672570 | Msa1460830 | 0.801685 | 8.011329e-49 | -8.615850e-47 |
| Msa0672570 | Msa1464940 | 0.807597 | 4.676455e-50 | -8.615850e-47 |
| Msa0672570 | Msa1466540 | 0.814913 | 1.209485e-51 | -8.615850e-47 |
| Msa0122590 | Msa0672570 | 0.801100 | 1.055898e-48 | -8.615850e-47 |
| Msa0127650 | Msa0672570 | 0.806103 | 9.677036e-50 | -8.615850e-47 |
| Msa0127800 | Msa0672570 | 0.801084 | 1.064088e-48 | -8.615850e-47 |
| Msa0133130 | Msa0672570 | 0.817499 | 3.194092e-52 | -8.615850e-47 |
| Msa0138020 | Msa0672570 | 0.806981 | 6.316949e-50 | -8.615850e-47 |
| Msa0141620 | Msa0672570 | 0.803124 | 4.048430e-49 | -8.615850e-47 |
| Msa0165210 | Msa0672570 | 0.808550 | 2.930815e-50 | -8.615850e-47 |
| Msa0166870 | Msa0672570 | 0.835062 | 2.088425e-56 | -8.615850e-47 |
| Msa0188830 | Msa0672570 | 0.818804 | 1.619117e-52 | -8.615850e-47 |
| Msa0205510 | Msa0672570 | 0.819264 | 1.272387e-52 | -8.615850e-47 |
| Msa0206010 | Msa0672570 | 0.828721 | 7.679501e-55 | -8.615850e-47 |
| Msa0210450 | Msa0672570 | 0.809889 | 1.513306e-50 | -8.615850e-47 |
| Msa0218370 | Msa0672570 | 0.814310 | 1.644345e-51 | -8.615850e-47 |
| Msa0220440 | Msa0672570 | 0.802128 | 6.497071e-49 | -8.615850e-47 |
| Msa0220580 | Msa0672570 | 0.802792 | 4.742319e-49 | -8.615850e-47 |
| Msa0223910 | Msa0672570 | 0.838214 | 3.284350e-57 | -8.615850e-47 |
| Msa0226890 | Msa0672570 | 0.813960 | 1.964631e-51 | -8.615850e-47 |
| Msa0229990 | Msa0672570 | 0.814651 | 1.381952e-51 | -8.615850e-47 |
| Msa0233300 | Msa0672570 | 0.813178 | 2.918692e-51 | -8.615850e-47 |
| Msa0369460 | Msa0672570 | 0.801166 | 1.023405e-48 | -8.615850e-47 |
| Msa0376350 | Msa0672570 | 0.817500 | 3.192711e-52 | -8.615850e-47 |
| Msa0379640 | Msa0672570 | 0.833323 | 5.695424e-56 | -8.615850e-47 |
| Msa0388960 | Msa0672570 | 0.818289 | 2.118796e-52 | -8.615850e-47 |
| Msa0389320 | Msa0672570 | 0.804829 | 1.790305e-49 | -8.615850e-47 |
| Msa0393080 | Msa0672570 | 0.825954 | 3.536070e-54 | -8.615850e-47 |
| Msa0397750 | Msa0672570 | 0.807832 | 4.168220e-50 | -8.615850e-47 |
| Msa0410650 | Msa0672570 | 0.812261 | 4.634659e-51 | -8.615850e-47 |
| Msa0424790 | Msa0672570 | 0.825531 | 4.455887e-54 | -8.615850e-47 |
| Msa0428590 | Msa0672570 | 0.800829 | 1.199741e-48 | -8.615850e-47 |
| Msa0428930 | Msa0672570 | 0.853581 | 2.174526e-61 | -8.615850e-47 |
| Msa0431690 | Msa0672570 | 0.815307 | 9.887611e-52 | -8.615850e-47 |
| Msa0435390 | Msa0672570 | 0.801875 | 7.325472e-49 | -8.615850e-47 |
| Msa0435400 | Msa0672570 | 0.803219 | 3.869413e-49 | -8.615850e-47 |
| Msa0436760 | Msa0672570 | 0.807447 | 5.032562e-50 | -8.615850e-47 |
| Msa0440750 | Msa0672570 | 0.833113 | 6.424806e-56 | -8.615850e-47 |
| Msa0453000 | Msa0672570 | 0.803554 | 3.298239e-49 | -8.615850e-47 |
| Msa0455760 | Msa0672570 | 0.830029 | 3.696926e-55 | -8.615850e-47 |
| Msa0464100 | Msa0672570 | 0.811346 | 7.329086e-51 | -8.615850e-47 |
| Msa0471900 | Msa0672570 | 0.803637 | 3.169500e-49 | -8.615850e-47 |
| Msa0481530 | Msa0672570 | 0.810656 | 1.034108e-50 | -8.615850e-47 |
| Msa0243480 | Msa0672570 | 0.818179 | 2.243306e-52 | -8.615850e-47 |
| Msa0245940 | Msa0672570 | 0.817012 | 4.112419e-52 | -8.615850e-47 |
| Msa0249100 | Msa0672570 | 0.816432 | 5.547903e-52 | -8.615850e-47 |
| Msa0249200 | Msa0672570 | 0.802886 | 4.533987e-49 | -8.615850e-47 |
| Msa0253200 | Msa0672570 | 0.809545 | 1.794430e-50 | -8.615850e-47 |
| Msa0260780 | Msa0672570 | 0.818252 | 2.159521e-52 | -8.615850e-47 |
| Msa0262510 | Msa0672570 | 0.801445 | 8.973306e-49 | -8.615850e-47 |
| Msa0265670 | Msa0672570 | 0.828399 | 9.185298e-55 | -8.615850e-47 |
| Msa0265680 | Msa0672570 | 0.801307 | 9.578608e-49 | -8.615850e-47 |
| Msa0281930 | Msa0672570 | 0.827846 | 1.248718e-54 | -8.615850e-47 |
| Msa0283450 | Msa0672570 | 0.801054 | 1.079048e-48 | -8.615850e-47 |
| Msa0284520 | Msa0672570 | 0.823656 | 1.231955e-53 | -8.615850e-47 |
| Msa0287410 | Msa0672570 | 0.823148 | 1.618718e-53 | -8.615850e-47 |
| Msa0292030 | Msa0672570 | 0.813030 | 3.145331e-51 | -8.615850e-47 |
| Msa0309770 | Msa0672570 | 0.806698 | 7.251156e-50 | -8.615850e-47 |
| Msa0315530 | Msa0672570 | 0.805099 | 1.571794e-49 | -8.615850e-47 |
| Msa0319170 | Msa0672570 | 0.800824 | 1.202378e-48 | -8.615850e-47 |
| Msa0321080 | Msa0672570 | 0.832864 | 7.411864e-56 | -8.615850e-47 |
| Msa0326110 | Msa0672570 | 0.833682 | 4.634000e-56 | -8.615850e-47 |
| Msa0340450 | Msa0672570 | 0.815616 | 8.440019e-52 | -8.615850e-47 |
| Msa0344910 | Msa0672570 | 0.803820 | 2.904642e-49 | -8.615850e-47 |
| Msa0344980 | Msa0672570 | 0.809729 | 1.638249e-50 | -8.615850e-47 |
| Msa0345970 | Msa0672570 | 0.806551 | 7.784850e-50 | -8.615850e-47 |
| Msa0363790 | Msa0672570 | 0.842903 | 1.945471e-58 | -8.615850e-47 |
| Msa0483850 | Msa0672570 | 0.805909 | 1.063176e-49 | -8.615850e-47 |
| Msa0484780 | Msa0672570 | 0.837658 | 4.565922e-57 | -8.615850e-47 |
| Msa0486690 | Msa0672570 | 0.831483 | 1.626907e-55 | -8.615850e-47 |
| Msa0488560 | Msa0672570 | 0.829522 | 4.911919e-55 | -8.615850e-47 |
| Msa0512900 | Msa0672570 | 0.810481 | 1.128464e-50 | -8.615850e-47 |
| Msa0516170 | Msa0672570 | 0.841003 | 6.184709e-58 | -8.615850e-47 |
| Msa0516440 | Msa0672570 | 0.803279 | 3.759928e-49 | -8.615850e-47 |
| Msa0518380 | Msa0672570 | 0.802354 | 5.839489e-49 | -8.615850e-47 |
| Msa0520940 | Msa0672570 | 0.816314 | 5.895242e-52 | -8.615850e-47 |
| Msa0522070 | Msa0672570 | 0.816519 | 5.304402e-52 | -8.615850e-47 |
| Msa0529890 | Msa0672570 | 0.814310 | 1.644345e-51 | -8.615850e-47 |
| Msa0531180 | Msa0672570 | 0.801015 | 1.099161e-48 | -8.615850e-47 |
| Msa0532350 | Msa0672570 | 0.818937 | 1.510174e-52 | -8.615850e-47 |
| Msa0538930 | Msa0672570 | 0.892512 | 1.482166e-74 | -8.615850e-47 |
| Msa0542520 | Msa0672570 | 0.805400 | 1.359585e-49 | -8.615850e-47 |
| Msa0545210 | Msa0672570 | 0.831867 | 1.308153e-55 | -8.615850e-47 |
| Msa0547890 | Msa0672570 | 0.801713 | 7.906517e-49 | -8.615850e-47 |
| Msa0551890 | Msa0672570 | 0.827554 | 1.467002e-54 | -8.615850e-47 |
| Msa0554050 | Msa0672570 | 0.831617 | 1.507979e-55 | -8.615850e-47 |
| Msa0555720 | Msa0672570 | 0.802351 | 5.847803e-49 | -8.615850e-47 |
| Msa0557320 | Msa0672570 | 0.813142 | 2.972206e-51 | -8.615850e-47 |
| Msa0559500 | Msa0672570 | 0.806415 | 8.318054e-50 | -8.615850e-47 |
| Msa0569500 | Msa0672570 | 0.852542 | 4.311046e-61 | -8.615850e-47 |
| Msa0571130 | Msa0672570 | 0.805623 | 1.220666e-49 | -8.615850e-47 |
| Msa0575470 | Msa0672570 | 0.806572 | 7.708992e-50 | -8.615850e-47 |
| Msa0578860 | Msa0672570 | 0.804465 | 2.132226e-49 | -8.615850e-47 |
| Msa0585560 | Msa0672570 | 0.812578 | 3.950730e-51 | -8.615850e-47 |
| Msa0586380 | Msa0672570 | 0.806477 | 8.071004e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672570 | MtrunA17_Chr4g0014101 | 98.298 | 235 | 4 | 0 | 1 | 235 | 1 | 235 | 7.07e-171 | 474 |
| Msa0672570 | MtrunA17_Chr4g0014111 | 91.949 | 236 | 19 | 0 | 1 | 236 | 1 | 236 | 6.79e-156 | 434 |
| Msa0672570 | MtrunA17_Chr4g0014141 | 75.424 | 236 | 47 | 2 | 2 | 235 | 1 | 227 | 2.84e-131 | 374 |
| Msa0672570 | MtrunA17_Chr4g0014161 | 77.533 | 227 | 45 | 1 | 9 | 235 | 10 | 230 | 1.03e-128 | 368 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672570 | AT1G33970.3 | 62.821 | 234 | 77 | 2 | 2 | 235 | 6 | 229 | 1.87e-94 | 278 |
| Msa0672570 | AT1G33970.1 | 62.821 | 234 | 77 | 2 | 2 | 235 | 6 | 229 | 5.59e-94 | 279 |
| Msa0672570 | AT1G33970.2 | 62.821 | 234 | 77 | 2 | 2 | 235 | 6 | 229 | 5.59e-94 | 279 |
| Msa0672570 | AT1G33970.4 | 62.821 | 234 | 77 | 2 | 2 | 235 | 6 | 229 | 5.59e-94 | 279 |
| Msa0672570 | AT1G33970.5 | 62.821 | 234 | 77 | 2 | 2 | 235 | 6 | 229 | 5.59e-94 | 279 |
| Msa0672570 | AT1G33930.1 | 53.219 | 233 | 103 | 1 | 9 | 235 | 9 | 241 | 2.93e-84 | 254 |
| Msa0672570 | AT1G33950.1 | 53.394 | 221 | 103 | 0 | 15 | 235 | 2 | 222 | 2.95e-84 | 253 |
| Msa0672570 | AT1G33960.1 | 60.488 | 205 | 81 | 0 | 31 | 235 | 44 | 248 | 5.14e-82 | 249 |
| Msa0672570 | AT1G33960.2 | 60.488 | 205 | 81 | 0 | 31 | 235 | 68 | 272 | 1.20e-81 | 249 |
| Msa0672570 | AT1G33900.1 | 53.302 | 212 | 98 | 1 | 25 | 235 | 14 | 225 | 5.33e-79 | 240 |
| Msa0672570 | AT1G33950.2 | 52.941 | 221 | 98 | 2 | 15 | 235 | 2 | 216 | 1.58e-78 | 238 |
| Msa0672570 | AT2G26820.2 | 55.825 | 206 | 91 | 0 | 30 | 235 | 6 | 211 | 5.72e-78 | 239 |
| Msa0672570 | AT2G26820.4 | 55.825 | 206 | 91 | 0 | 30 | 235 | 6 | 211 | 1.15e-77 | 239 |
| Msa0672570 | AT2G26820.1 | 55.825 | 206 | 91 | 0 | 30 | 235 | 6 | 211 | 1.69e-76 | 238 |
| Msa0672570 | AT2G26820.3 | 55.825 | 206 | 91 | 0 | 30 | 235 | 6 | 211 | 1.99e-76 | 239 |
| Msa0672570 | AT1G33890.1 | 52.336 | 214 | 101 | 1 | 23 | 235 | 6 | 219 | 1.03e-71 | 222 |
| Msa0672570 | AT1G33890.2 | 52.336 | 214 | 101 | 1 | 23 | 235 | 6 | 219 | 1.03e-71 | 222 |
| Msa0672570 | AT1G33830.1 | 51.471 | 204 | 99 | 0 | 32 | 235 | 11 | 214 | 1.17e-71 | 218 |
| Msa0672570 | AT4G09940.1 | 51.675 | 209 | 98 | 3 | 21 | 228 | 39 | 245 | 1.85e-70 | 221 |
| Msa0672570 | AT1G33910.1 | 54.245 | 212 | 86 | 3 | 23 | 233 | 6 | 207 | 2.21e-70 | 218 |
| Msa0672570 | AT4G09940.2 | 52.709 | 203 | 93 | 3 | 21 | 222 | 82 | 282 | 8.91e-70 | 220 |
| Msa0672570 | AT4G09950.1 | 50.000 | 220 | 106 | 4 | 17 | 235 | 5 | 221 | 7.53e-65 | 204 |
| Msa0672570 | AT4G09930.1 | 46.018 | 226 | 117 | 3 | 2 | 226 | 1 | 222 | 2.23e-62 | 198 |
| Msa0672570 | AT1G33870.1 | 50.000 | 182 | 91 | 0 | 54 | 235 | 1 | 182 | 3.14e-60 | 190 |
| Msa0672570 | AT1G33880.2 | 41.827 | 208 | 115 | 2 | 29 | 236 | 23 | 224 | 3.77e-58 | 184 |
| Msa0672570 | AT1G33880.1 | 41.827 | 208 | 115 | 2 | 29 | 236 | 23 | 224 | 3.77e-58 | 184 |
| Msa0672570 | AT4G09950.2 | 47.742 | 155 | 77 | 4 | 82 | 235 | 7 | 158 | 6.73e-37 | 130 |
Find 57 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAGCTTGCAGACATTATT+TGG | 0.116982 | 4_4:-17714270 | Msa0672570:CDS |
| TCTGCTGGATCTGAGTTTAT+TGG | 0.235468 | 4_4:-17714399 | Msa0672570:CDS |
| GATACACTTGACGATTATTT+AGG | 0.266607 | 4_4:-17714183 | Msa0672570:CDS |
| CTGCTGGATCTGAGTTTATT+GGG | 0.278196 | 4_4:-17714398 | Msa0672570:CDS |
| GCAAATAACGCATCTGTATA+AGG | 0.295127 | 4_4:+17713298 | None:intergenic |
| TGAAGCTCGGACAGTGGTTT+TGG | 0.303565 | 4_4:-17715366 | Msa0672570:CDS |
| GATTGGGAATTCGCGTCGTC+TGG | 0.337974 | 4_4:-17715419 | Msa0672570:CDS |
| TAATAGTATTCTTGGGAAAA+AGG | 0.341397 | 4_4:-17715309 | Msa0672570:CDS |
| GCAACCGGTAATAGTATTCT+TGG | 0.374174 | 4_4:-17715317 | Msa0672570:CDS |
| TTTCCCAAGAATACTATTAC+CGG | 0.377468 | 4_4:+17715313 | None:intergenic |
| GAAGCTATGTTGAAGATGAT+TGG | 0.381049 | 4_4:-17715436 | Msa0672570:CDS |
| TCAGTGATTTGGATTTATGA+TGG | 0.381338 | 4_4:-17715462 | Msa0672570:intron |
| CAGTGATTTGGATTTATGAT+GGG | 0.391340 | 4_4:-17715461 | Msa0672570:exon |
| GGTTGCACTCTTCCCATTGC+CGG | 0.411306 | 4_4:+17715334 | None:intergenic |
| GGATTATTTGAAGTTTCTGC+TGG | 0.441692 | 4_4:-17714414 | Msa0672570:CDS |
| CTATATGATTGTGGTCTTCA+CGG | 0.447172 | 4_4:-17714232 | Msa0672570:CDS |
| TTGGTTGGACGTACCGGCAA+TGG | 0.448150 | 4_4:-17715347 | Msa0672570:CDS |
| AAGTCTAGGGCTAGCTCGTC+CGG | 0.448442 | 4_4:-17715281 | Msa0672570:CDS |
| AAGCTATGTTGAAGATGATT+GGG | 0.476526 | 4_4:-17715435 | Msa0672570:CDS |
| TGCGTTATTTGCAGAACTAA+AGG | 0.480208 | 4_4:-17713287 | Msa0672570:CDS |
| GGCAATGGGAAGAGTGCAAC+CGG | 0.490727 | 4_4:-17715332 | Msa0672570:CDS |
| CAACCGGTAATAGTATTCTT+GGG | 0.491758 | 4_4:-17715316 | Msa0672570:CDS |
| TCTCTTTGACAACAAGACTA+AGG | 0.507101 | 4_4:-17713398 | Msa0672570:CDS |
| TGCATAGACTTTGCCAAGGA+TGG | 0.507813 | 4_4:-17714360 | Msa0672570:CDS |
| TATATGATTGTGGTCTTCAC+GGG | 0.509376 | 4_4:-17714231 | Msa0672570:CDS |
| TGGTTGGACGTACCGGCAAT+GGG | 0.511384 | 4_4:-17715346 | Msa0672570:CDS |
| AAGGACGAAAAGAAGCGATC+TGG | 0.516709 | 4_4:-17713379 | Msa0672570:CDS |
| GTCAATGTTATTGACACTCC+AGG | 0.521632 | 4_4:-17715206 | Msa0672570:intron |
| GACAGATAACACCACAAGAA+TGG | 0.522190 | 4_4:+17714329 | None:intergenic |
| CTTTGATTCTCTCACTTCGC+AGG | 0.528417 | 4_4:-17716293 | Msa0672570:intron |
| TGAATGTCCAGAGTCTTTGA+AGG | 0.532393 | 4_4:-17714157 | Msa0672570:intron |
| TCAAAGACTCTGGACATTCA+CGG | 0.540421 | 4_4:+17714160 | None:intergenic |
| AATGGCATGGATACCATCCT+TGG | 0.542900 | 4_4:+17714347 | None:intergenic |
| AGTGATTTGGATTTATGATG+GGG | 0.544950 | 4_4:-17715460 | Msa0672570:exon |
| TGATAGTATCACAGAATGGC+GGG | 0.545440 | 4_4:-17713324 | Msa0672570:CDS |
| GATTGTGGTCTTCACGGGAG+GGG | 0.549312 | 4_4:-17714226 | Msa0672570:CDS |
| TAGCAAATCCTCTCTTTGTG+TGG | 0.559170 | 4_4:-17713433 | Msa0672570:CDS |
| AGCAAATCCTCTCTTTGTGT+GGG | 0.561083 | 4_4:-17713432 | Msa0672570:CDS |
| TGATTGTGGTCTTCACGGGA+GGG | 0.573707 | 4_4:-17714227 | Msa0672570:CDS |
| AGCTAATGAAGCTCGGACAG+TGG | 0.575504 | 4_4:-17715372 | Msa0672570:CDS |
| AGATTTCAGCTAATGAAGCT+CGG | 0.577288 | 4_4:-17715379 | Msa0672570:CDS |
| AGCAGTCTGCATTTCACAAG+AGG | 0.579383 | 4_4:+17715250 | None:intergenic |
| TGATTTGGATTTATGATGGG+GGG | 0.579601 | 4_4:-17715458 | Msa0672570:exon |
| AACGATTCCCACACAAAGAG+AGG | 0.592811 | 4_4:+17713425 | None:intergenic |
| ATGATTGTGGTCTTCACGGG+AGG | 0.597619 | 4_4:-17714228 | Msa0672570:CDS |
| GATTGTTGACTATATGATTG+TGG | 0.602009 | 4_4:-17714241 | Msa0672570:CDS |
| GTGATTTGGATTTATGATGG+GGG | 0.609123 | 4_4:-17715459 | Msa0672570:exon |
| AACATGATAGTATCACAGAA+TGG | 0.613239 | 4_4:-17713328 | Msa0672570:CDS |
| TGGTATCCATGCCATTCTTG+TGG | 0.626101 | 4_4:-17714340 | Msa0672570:CDS |
| CAGACTGCTGAGTTGAGTGA+TGG | 0.635531 | 4_4:-17715236 | Msa0672570:CDS |
| TTCACAAGAGGAAGTGACAC+CGG | 0.638052 | 4_4:+17715262 | None:intergenic |
| ATAACACCACAAGAATGGCA+TGG | 0.647650 | 4_4:+17714334 | None:intergenic |
| GTCGTCTGGATCAGCTAGCG+AGG | 0.653145 | 4_4:-17715405 | Msa0672570:CDS |
| ATGATAGTATCACAGAATGG+CGG | 0.664615 | 4_4:-17713325 | Msa0672570:CDS |
| TGTCAGATCACGATTTAGCG+AGG | 0.673590 | 4_4:-17714310 | Msa0672570:CDS |
| CAAGTGCATAGACTTTGCCA+AGG | 0.679540 | 4_4:-17714364 | Msa0672570:CDS |
| AGTGAGAGAATCAAAGTACG+CGG | 0.751419 | 4_4:+17716300 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTCTCAAATTATTAT+CGG | - | chr4_4:17713702-17713721 | Msa0672570:intron | 10.0% |
| !! | ATAGAATAAAAAAAGAAATA+GGG | + | chr4_4:17715517-17715536 | None:intergenic | 10.0% |
| !! | GTATTAATATTCTTAATAAA+AGG | - | chr4_4:17715617-17715636 | Msa0672570:intron | 10.0% |
| !!! | AATTATTAATTTTTCTATAG+AGG | + | chr4_4:17716135-17716154 | None:intergenic | 10.0% |
| !!! | AAACAACGTTAAATTTTTTT+AGG | - | chr4_4:17714612-17714631 | Msa0672570:intron | 15.0% |
| !!! | AACAACGTTAAATTTTTTTA+GGG | - | chr4_4:17714613-17714632 | Msa0672570:intron | 15.0% |
| !! | TAGAATAAAAAAAGAAATAG+GGG | + | chr4_4:17715516-17715535 | None:intergenic | 15.0% |
| !! | CATAGAATAAAAAAAGAAAT+AGG | + | chr4_4:17715518-17715537 | None:intergenic | 15.0% |
| !!! | CTATTTCTTTTTTTATTCTA+TGG | - | chr4_4:17715516-17715535 | Msa0672570:intron | 15.0% |
| !!! | AATTTTTTCCAGATAAAATA+AGG | + | chr4_4:17715973-17715992 | None:intergenic | 15.0% |
| !!! | TATTTTATCTGGAAAAAATT+AGG | - | chr4_4:17715973-17715992 | Msa0672570:intron | 15.0% |
| !!! | TAATTTTGTTGATCTTTAAT+TGG | - | chr4_4:17716150-17716169 | Msa0672570:intron | 15.0% |
| !! | AATACATAATTGAAGTGTAA+AGG | + | chr4_4:17713389-17713408 | None:intergenic | 20.0% |
| !!! | TCTTGATTCAACAATTTTTT+TGG | - | chr4_4:17713570-17713589 | Msa0672570:intron | 20.0% |
| !!! | TGGTTAAGTTTGTTAATTAT+TGG | - | chr4_4:17713590-17713609 | Msa0672570:intron | 20.0% |
| !!! | ACCAAAATTTGTTGAATTAA+AGG | + | chr4_4:17714013-17714032 | None:intergenic | 20.0% |
| !!! | TGGTTAAGTTTGTTATTTAT+TGG | - | chr4_4:17714029-17714048 | Msa0672570:intron | 20.0% |
| !!! | TTAATTTCTTTTCAGTGATT+TGG | - | chr4_4:17714147-17714166 | Msa0672570:intron | 20.0% |
| !! | AGAAAAAACATATATCACAA+AGG | + | chr4_4:17715743-17715762 | None:intergenic | 20.0% |
| !!! | TTTGTGATATATGTTTTTTC+TGG | - | chr4_4:17715742-17715761 | Msa0672570:intron | 20.0% |
| ! | AATGAAACAAAATCGCTATA+GGG | + | chr4_4:17713470-17713489 | None:intergenic | 25.0% |
| ! | TAATGAAACAAAATCGCTAT+AGG | + | chr4_4:17713471-17713490 | None:intergenic | 25.0% |
| !! | TTTTCTCAAATTATTATCGG+CGG | - | chr4_4:17713705-17713724 | Msa0672570:intron | 25.0% |
| !!! | ATCAAGATTTTGTTGTTGTT+AGG | + | chr4_4:17713846-17713865 | None:intergenic | 25.0% |
| !! | GCCTTTAATTCAACAAATTT+TGG | - | chr4_4:17714009-17714028 | Msa0672570:intron | 25.0% |
| ! | TATGATGACACTAATCAATA+TGG | + | chr4_4:17714105-17714124 | None:intergenic | 25.0% |
| ! | TAATAGTATTCTTGGGAAAA+AGG | - | chr4_4:17714311-17714330 | Msa0672570:CDS | 25.0% |
| !!! | TTAACGTTGTTTTATTTCCA+GGG | + | chr4_4:17714604-17714623 | None:intergenic | 25.0% |
| !!! | TTTAACGTTGTTTTATTTCC+AGG | + | chr4_4:17714605-17714624 | None:intergenic | 25.0% |
| ! | TTTCATGTTTCTTACAAGAT+TGG | - | chr4_4:17714800-17714819 | Msa0672570:intron | 25.0% |
| !! | CCTTTGAGAATAAAAATCAT+CGG | + | chr4_4:17714856-17714875 | None:intergenic | 25.0% |
| ! | TCAAAGGAACTTTACAAATT+TGG | - | chr4_4:17714975-17714994 | Msa0672570:intron | 25.0% |
| !! | TTTAACCTGAAAAGTTTTAC+AGG | - | chr4_4:17715185-17715204 | Msa0672570:intron | 25.0% |
| !! | ATAATCCTGTAAAACTTTTC+AGG | + | chr4_4:17715193-17715212 | None:intergenic | 25.0% |
| !!! | CTATGGATTACTTTTTTCAT+TGG | - | chr4_4:17715533-17715552 | Msa0672570:intron | 25.0% |
| ! | TGTTCTATCTTGTAATCTTA+TGG | - | chr4_4:17715892-17715911 | Msa0672570:intron | 25.0% |
| ! | AATACGAGAGAAAAATTACA+GGG | + | chr4_4:17715938-17715957 | None:intergenic | 25.0% |
| ! | AAATACGAGAGAAAAATTAC+AGG | + | chr4_4:17715939-17715958 | None:intergenic | 25.0% |
| !! | TTTTCCAGATAAAATAAGGA+AGG | + | chr4_4:17715969-17715988 | None:intergenic | 25.0% |
| ! | TGTTTGCATGTTGATATAAT+TGG | - | chr4_4:17716043-17716062 | Msa0672570:intron | 25.0% |
| !! | GCTTGAATATCTAGAATTAT+AGG | - | chr4_4:17716092-17716111 | Msa0672570:intron | 25.0% |
| ! | TGAATTTCTCGACTCTTTTT+AGG | - | chr4_4:17713511-17713530 | Msa0672570:intron | 30.0% |
| ! | GAATTTCTCGACTCTTTTTA+GGG | - | chr4_4:17713512-17713531 | Msa0672570:intron | 30.0% |
| TTAGTTACAGTGAAGAAAGA+CGG | + | chr4_4:17713542-17713561 | None:intergenic | 30.0% | |
| ! | TTGATTGACTAGTTAGTCAA+TGG | - | chr4_4:17713624-17713643 | Msa0672570:intron | 30.0% |
| TTGAAAGTAATCACATGTGT+CGG | + | chr4_4:17713677-17713696 | None:intergenic | 30.0% | |
| ! | TCAGTGATTTGGATTTATGA+TGG | - | chr4_4:17714158-17714177 | Msa0672570:CDS | 30.0% |
| ! | CAGTGATTTGGATTTATGAT+GGG | - | chr4_4:17714159-17714178 | Msa0672570:CDS | 30.0% |
| ! | AGTGATTTGGATTTATGATG+GGG | - | chr4_4:17714160-17714179 | Msa0672570:CDS | 30.0% |
| AAGCTATGTTGAAGATGATT+GGG | - | chr4_4:17714185-17714204 | Msa0672570:CDS | 30.0% | |
| TTTCCCAAGAATACTATTAC+CGG | + | chr4_4:17714310-17714329 | None:intergenic | 30.0% | |
| ! | TAATTTGCCATGTATTTACC+TGG | + | chr4_4:17714435-17714454 | None:intergenic | 30.0% |
| AGGTAAATACATGGCAAATT+AGG | - | chr4_4:17714434-17714453 | Msa0672570:intron | 30.0% | |
| AACACACACAGGTAATAATT+GGG | + | chr4_4:17714518-17714537 | None:intergenic | 30.0% | |
| AAACATGAAAATCATCTCCT+GGG | + | chr4_4:17714790-17714809 | None:intergenic | 30.0% | |
| ! | CCGATGATTTTTATTCTCAA+AGG | - | chr4_4:17714853-17714872 | Msa0672570:intron | 30.0% |
| ! | GATTTTTATTCTCAAAGGAG+AGG | - | chr4_4:17714858-17714877 | Msa0672570:intron | 30.0% |
| ! | GAAAGTAGATTTTGTGAGAT+GGG | - | chr4_4:17714893-17714912 | Msa0672570:intron | 30.0% |
| ATCCCCTAGAATAATATTCT+TGG | - | chr4_4:17715016-17715035 | Msa0672570:intron | 30.0% | |
| TGCCAAGAATATTATTCTAG+GGG | + | chr4_4:17715021-17715040 | None:intergenic | 30.0% | |
| CTGCCAAGAATATTATTCTA+GGG | + | chr4_4:17715022-17715041 | None:intergenic | 30.0% | |
| !!! | TTTTTGGAATGTCATTCACA+AGG | - | chr4_4:17715047-17715066 | Msa0672570:intron | 30.0% |
| ! | GATTGTTGACTATATGATTG+TGG | - | chr4_4:17715379-17715398 | Msa0672570:CDS | 30.0% |
| GATACACTTGACGATTATTT+AGG | - | chr4_4:17715437-17715456 | Msa0672570:CDS | 30.0% | |
| AAAAATACCTTCAAAGACTC+TGG | + | chr4_4:17715473-17715492 | None:intergenic | 30.0% | |
| !! | CACAAAGGTGCATATTTTAA+AGG | + | chr4_4:17715728-17715747 | None:intergenic | 30.0% |
| AAATTCCCATTTGAACCATT+TGG | - | chr4_4:17715789-17715808 | Msa0672570:intron | 30.0% | |
| AATCTCCAAATGGTTCAAAT+GGG | + | chr4_4:17715797-17715816 | None:intergenic | 30.0% | |
| AAATCTCCAAATGGTTCAAA+TGG | + | chr4_4:17715798-17715817 | None:intergenic | 30.0% | |
| !! | CACTGTTTTAAATCTCCAAA+TGG | + | chr4_4:17715807-17715826 | None:intergenic | 30.0% |
| TTAAAACAGTGATATGCAGA+AGG | - | chr4_4:17715816-17715835 | Msa0672570:intron | 30.0% | |
| !!! | AATGCCTTCCTTATTTTATC+TGG | - | chr4_4:17715962-17715981 | Msa0672570:intron | 30.0% |
| AACATGATAGTATCACAGAA+TGG | - | chr4_4:17716292-17716311 | Msa0672570:intron | 30.0% | |
| TAAAGGATGATGTAGCTAAG+AGG | + | chr4_4:17713372-17713391 | None:intergenic | 35.0% | |
| TAGTAACTAGCTACGAATCA+AGG | + | chr4_4:17713773-17713792 | None:intergenic | 35.0% | |
| GAATTAAAGGCTCTTAAGCA+CGG | + | chr4_4:17714000-17714019 | None:intergenic | 35.0% | |
| ! | GTGATTTGGATTTATGATGG+GGG | - | chr4_4:17714161-17714180 | Msa0672570:CDS | 35.0% |
| ! | TGATTTGGATTTATGATGGG+GGG | - | chr4_4:17714162-17714181 | Msa0672570:CDS | 35.0% |
| GAAGCTATGTTGAAGATGAT+TGG | - | chr4_4:17714184-17714203 | Msa0672570:CDS | 35.0% | |
| AGATTTCAGCTAATGAAGCT+CGG | - | chr4_4:17714241-17714260 | Msa0672570:CDS | 35.0% | |
| CAACCGGTAATAGTATTCTT+GGG | - | chr4_4:17714304-17714323 | Msa0672570:CDS | 35.0% | |
| GAAAAAGGTCTTCAAGTCTA+GGG | - | chr4_4:17714326-17714345 | Msa0672570:CDS | 35.0% | |
| ATACATGGCAAATTAGGCTA+TGG | - | chr4_4:17714440-17714459 | Msa0672570:intron | 35.0% | |
| CAACACACACAGGTAATAAT+TGG | + | chr4_4:17714519-17714538 | None:intergenic | 35.0% | |
| CTAACAAAAACAACACACAC+AGG | + | chr4_4:17714529-17714548 | None:intergenic | 35.0% | |
| !! | TGTTTTTGTTAGTGCTTCGT+AGG | - | chr4_4:17714537-17714556 | Msa0672570:intron | 35.0% |
| !! | TTTTAGGGACAGCTTATCAT+AGG | - | chr4_4:17714628-17714647 | Msa0672570:intron | 35.0% |
| CTTATCCTACAAAACAGACA+CGG | + | chr4_4:17714676-17714695 | None:intergenic | 35.0% | |
| ! | GATTAGTCGAGTTTAAACCA+AGG | - | chr4_4:17714715-17714734 | Msa0672570:intron | 35.0% |
| GAAACATGAAAATCATCTCC+TGG | + | chr4_4:17714791-17714810 | None:intergenic | 35.0% | |
| TTTATTCTCAAAGGAGAGGT+TGG | - | chr4_4:17714862-17714881 | Msa0672570:intron | 35.0% | |
| TTATTCTCAAAGGAGAGGTT+GGG | - | chr4_4:17714863-17714882 | Msa0672570:intron | 35.0% | |
| ! | GGAAAGTAGATTTTGTGAGA+TGG | - | chr4_4:17714892-17714911 | Msa0672570:intron | 35.0% |
| ! | TTTGAACTTTTCCAAAAGCG+GGG | + | chr4_4:17714960-17714979 | None:intergenic | 35.0% |
| ! | CTTTGAACTTTTCCAAAAGC+GGG | + | chr4_4:17714961-17714980 | None:intergenic | 35.0% |
| ! | CCTTTGAACTTTTCCAAAAG+CGG | + | chr4_4:17714962-17714981 | None:intergenic | 35.0% |
| CCTGCCAAGAATATTATTCT+AGG | + | chr4_4:17715023-17715042 | None:intergenic | 35.0% | |
| CCTAGAATAATATTCTTGGC+AGG | - | chr4_4:17715020-17715039 | Msa0672570:intron | 35.0% | |
| !!! | ATTCTTGGCAGGATGTTTTT+TGG | - | chr4_4:17715031-17715050 | Msa0672570:intron | 35.0% |
| CATAACTCAAACAAAGCCAT+AGG | + | chr4_4:17715103-17715122 | None:intergenic | 35.0% | |
| !! | CAAACTTTTCAAGACGTAGA+AGG | + | chr4_4:17715159-17715178 | None:intergenic | 35.0% |
| ! | GGATTATTTGAAGTTTCTGC+TGG | - | chr4_4:17715206-17715225 | Msa0672570:intron | 35.0% |
| CTATATGATTGTGGTCTTCA+CGG | - | chr4_4:17715388-17715407 | Msa0672570:CDS | 35.0% | |
| TATATGATTGTGGTCTTCAC+GGG | - | chr4_4:17715389-17715408 | Msa0672570:CDS | 35.0% | |
| ATAAAGGAGAGAGTTCAAGA+AGG | + | chr4_4:17715664-17715683 | None:intergenic | 35.0% | |
| CTAGTGATTCGCATCAATAA+AGG | + | chr4_4:17715680-17715699 | None:intergenic | 35.0% | |
| !! | TGTAGGTTATTAGCCTTTCT+TGG | - | chr4_4:17715860-17715879 | Msa0672570:intron | 35.0% |
| AACAGCAAAACAACCAAGAA+AGG | + | chr4_4:17715876-17715895 | None:intergenic | 35.0% | |
| TCTCTTTGACAACAAGACTA+AGG | - | chr4_4:17716222-17716241 | Msa0672570:intron | 35.0% | |
| ATGATAGTATCACAGAATGG+CGG | - | chr4_4:17716295-17716314 | Msa0672570:five_prime_UTR | 35.0% | |
| GCAAATAACGCATCTGTATA+AGG | + | chr4_4:17716325-17716344 | None:intergenic | 35.0% | |
| TGCGTTATTTGCAGAACTAA+AGG | - | chr4_4:17716333-17716352 | Msa0672570:five_prime_UTR | 35.0% | |
| AGTGAGAGAATCAAAGTACG+CGG | + | chr4_4:17713323-17713342 | None:intergenic | 40.0% | |
| GCAACCGGTAATAGTATTCT+TGG | - | chr4_4:17714303-17714322 | Msa0672570:CDS | 40.0% | |
| GGAAAAAGGTCTTCAAGTCT+AGG | - | chr4_4:17714325-17714344 | Msa0672570:CDS | 40.0% | |
| GTCAATGTTATTGACACTCC+AGG | - | chr4_4:17714414-17714433 | Msa0672570:CDS | 40.0% | |
| TGACACTCCAGGTAAATACA+TGG | - | chr4_4:17714425-17714444 | Msa0672570:intron | 40.0% | |
| ACGGACACCAAAAACGAAAT+GGG | + | chr4_4:17714657-17714676 | None:intergenic | 40.0% | |
| GCTTATGATAAGTTGTGCCT+TGG | + | chr4_4:17714735-17714754 | None:intergenic | 40.0% | |
| !!! | GGGTTTTGAAGGAATGTGAA+TGG | + | chr4_4:17714761-17714780 | None:intergenic | 40.0% |
| AATCATCTCCTGGGTGTAAA+GGG | + | chr4_4:17714781-17714800 | None:intergenic | 40.0% | |
| AAATCATCTCCTGGGTGTAA+AGG | + | chr4_4:17714782-17714801 | None:intergenic | 40.0% | |
| !! | CCGCTTTTGGAAAAGTTCAA+AGG | - | chr4_4:17714959-17714978 | Msa0672570:intron | 40.0% |
| !! | CCATAGGTGTTACTTGTTTC+AGG | + | chr4_4:17715087-17715106 | None:intergenic | 40.0% |
| CCTGAAACAAGTAACACCTA+TGG | - | chr4_4:17715084-17715103 | Msa0672570:intron | 40.0% | |
| TCTGCTGGATCTGAGTTTAT+TGG | - | chr4_4:17715221-17715240 | Msa0672570:CDS | 40.0% | |
| CTGCTGGATCTGAGTTTATT+GGG | - | chr4_4:17715222-17715241 | Msa0672570:CDS | 40.0% | |
| ATAACACCACAAGAATGGCA+TGG | + | chr4_4:17715289-17715308 | None:intergenic | 40.0% | |
| GACAGATAACACCACAAGAA+TGG | + | chr4_4:17715294-17715313 | None:intergenic | 40.0% | |
| TCAAAGACTCTGGACATTCA+CGG | + | chr4_4:17715463-17715482 | None:intergenic | 40.0% | |
| TGAATGTCCAGAGTCTTTGA+AGG | - | chr4_4:17715463-17715482 | Msa0672570:intron | 40.0% | |
| AGCAAGTCTTCTTACGCATT+TGG | - | chr4_4:17715698-17715717 | Msa0672570:intron | 40.0% | |
| GTGAACTCTATGCTCTATGT+AGG | - | chr4_4:17715843-17715862 | Msa0672570:intron | 40.0% | |
| TAGCAAATCCTCTCTTTGTG+TGG | - | chr4_4:17716187-17716206 | Msa0672570:intron | 40.0% | |
| AGCAAATCCTCTCTTTGTGT+GGG | - | chr4_4:17716188-17716207 | Msa0672570:intron | 40.0% | |
| TGATAGTATCACAGAATGGC+GGG | - | chr4_4:17716296-17716315 | Msa0672570:five_prime_UTR | 40.0% | |
| CTTTGATTCTCTCACTTCGC+AGG | - | chr4_4:17713327-17713346 | Msa0672570:CDS | 45.0% | |
| ! | ACGCCTTTGTTCAGAAGTGT+CGG | + | chr4_4:17713652-17713671 | None:intergenic | 45.0% |
| ! | GCACTGACACTTCTGATCAA+AGG | - | chr4_4:17713873-17713892 | Msa0672570:intron | 45.0% |
| TACATGTGTTGTGTCCGTGT+AGG | + | chr4_4:17713911-17713930 | None:intergenic | 45.0% | |
| TTCACAAGAGGAAGTGACAC+CGG | + | chr4_4:17714361-17714380 | None:intergenic | 45.0% | |
| AGCAGTCTGCATTTCACAAG+AGG | + | chr4_4:17714373-17714392 | None:intergenic | 45.0% | |
| CATTAGTCGAGTTTGAACCC+TGG | - | chr4_4:17714584-17714603 | Msa0672570:intron | 45.0% | |
| ! | TAGGCACCCCATTTCGTTTT+TGG | - | chr4_4:17714647-17714666 | Msa0672570:intron | 45.0% |
| CGGACACCAAAAACGAAATG+GGG | + | chr4_4:17714656-17714675 | None:intergenic | 45.0% | |
| CACGGACACCAAAAACGAAA+TGG | + | chr4_4:17714658-17714677 | None:intergenic | 45.0% | |
| !! | CTGGGTGTAAAGGGTTTTGA+AGG | + | chr4_4:17714772-17714791 | None:intergenic | 45.0% |
| CTTCAAAACCCTTTACACCC+AGG | - | chr4_4:17714770-17714789 | Msa0672570:intron | 45.0% | |
| ! | TTTAACCTCAACCCCGCTTT+TGG | - | chr4_4:17714946-17714965 | Msa0672570:intron | 45.0% |
| CAAGTGCATAGACTTTGCCA+AGG | - | chr4_4:17715256-17715275 | Msa0672570:CDS | 45.0% | |
| TGCATAGACTTTGCCAAGGA+TGG | - | chr4_4:17715260-17715279 | Msa0672570:CDS | 45.0% | |
| AATGGCATGGATACCATCCT+TGG | + | chr4_4:17715276-17715295 | None:intergenic | 45.0% | |
| TGGTATCCATGCCATTCTTG+TGG | - | chr4_4:17715280-17715299 | Msa0672570:CDS | 45.0% | |
| TGTCAGATCACGATTTAGCG+AGG | - | chr4_4:17715310-17715329 | Msa0672570:CDS | 45.0% | |
| CGCAGCTTGCAGACATTATT+TGG | - | chr4_4:17715350-17715369 | Msa0672570:CDS | 45.0% | |
| AACGATTCCCACACAAAGAG+AGG | + | chr4_4:17716198-17716217 | None:intergenic | 45.0% | |
| AAGGACGAAAAGAAGCGATC+TGG | - | chr4_4:17716241-17716260 | Msa0672570:intron | 45.0% | |
| ! | GCACCGACACTTCTGAACAA+AGG | - | chr4_4:17713646-17713665 | Msa0672570:intron | 50.0% |
| GTTGTGTCCGTGTAGGACAA+TGG | + | chr4_4:17713904-17713923 | None:intergenic | 50.0% | |
| AAAGGCTCTTAAGCACGGCA+CGG | + | chr4_4:17713995-17714014 | None:intergenic | 50.0% | |
| AGCTAATGAAGCTCGGACAG+TGG | - | chr4_4:17714248-17714267 | Msa0672570:CDS | 50.0% | |
| ! | TGAAGCTCGGACAGTGGTTT+TGG | - | chr4_4:17714254-17714273 | Msa0672570:CDS | 50.0% |
| !!! | GTGGTTTTGGTTGGACGTAC+CGG | - | chr4_4:17714267-17714286 | Msa0672570:CDS | 50.0% |
| ! | CAGACTGCTGAGTTGAGTGA+TGG | - | chr4_4:17714384-17714403 | Msa0672570:CDS | 50.0% |
| ! | GGTGTCCGTGTCTGTTTTGT+AGG | - | chr4_4:17714668-17714687 | Msa0672570:intron | 50.0% |
| AAAGGAGAGGTTGGGCTGTT+GGG | - | chr4_4:17714871-17714890 | Msa0672570:intron | 50.0% | |
| ! | CTTTTCCAAAAGCGGGGTTG+AGG | + | chr4_4:17714954-17714973 | None:intergenic | 50.0% |
| ATGATTGTGGTCTTCACGGG+AGG | - | chr4_4:17715392-17715411 | Msa0672570:CDS | 50.0% | |
| TGATTGTGGTCTTCACGGGA+GGG | - | chr4_4:17715393-17715412 | Msa0672570:CDS | 50.0% | |
| GGCGTGTCCATTGTCCTACA+CGG | - | chr4_4:17713894-17713913 | Msa0672570:intron | 55.0% | |
| GGACAGACATGGACACGACA+CGG | + | chr4_4:17713974-17713993 | None:intergenic | 55.0% | |
| GATTGGGAATTCGCGTCGTC+TGG | - | chr4_4:17714201-17714220 | Msa0672570:CDS | 55.0% | |
| !!! | GCTCGGACAGTGGTTTTGGT+TGG | - | chr4_4:17714258-17714277 | Msa0672570:CDS | 55.0% |
| ! | TTGGTTGGACGTACCGGCAA+TGG | - | chr4_4:17714273-17714292 | Msa0672570:CDS | 55.0% |
| ! | TGGTTGGACGTACCGGCAAT+GGG | - | chr4_4:17714274-17714293 | Msa0672570:CDS | 55.0% |
| GGTTGCACTCTTCCCATTGC+CGG | + | chr4_4:17714289-17714308 | None:intergenic | 55.0% | |
| ! | GGCAATGGGAAGAGTGCAAC+CGG | - | chr4_4:17714288-17714307 | Msa0672570:CDS | 55.0% |
| !! | AAGTCTAGGGCTAGCTCGTC+CGG | - | chr4_4:17714339-17714358 | Msa0672570:CDS | 55.0% |
| CAAAGGAGAGGTTGGGCTGT+TGG | - | chr4_4:17714870-17714889 | Msa0672570:intron | 55.0% | |
| GATTGTGGTCTTCACGGGAG+GGG | - | chr4_4:17715394-17715413 | Msa0672570:CDS | 55.0% | |
| AAGCACGGCACGGACAGACA+TGG | + | chr4_4:17713985-17714004 | None:intergenic | 60.0% | |
| GTCGTCTGGATCAGCTAGCG+AGG | - | chr4_4:17714215-17714234 | Msa0672570:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 17713285 | 17716357 | 17713285 | ID=Msa0672570;Name=Msa0672570 |
| chr4_4 | mRNA | 17713285 | 17716357 | 17713285 | ID=Msa0672570-mRNA-1;Parent=Msa0672570;Name=Msa0672570-mRNA-1;_AED=0.03;_eAED=0.03;_QI=76|1|0.75|1|0.66|0.5|4|0|236 |
| chr4_4 | exon | 17713285 | 17713452 | 17713285 | ID=Msa0672570-mRNA-1:exon:5186;Parent=Msa0672570-mRNA-1 |
| chr4_4 | exon | 17714158 | 17714435 | 17714158 | ID=Msa0672570-mRNA-1:exon:5185;Parent=Msa0672570-mRNA-1 |
| chr4_4 | exon | 17715207 | 17715480 | 17715207 | ID=Msa0672570-mRNA-1:exon:5184;Parent=Msa0672570-mRNA-1 |
| chr4_4 | exon | 17716294 | 17716357 | 17716294 | ID=Msa0672570-mRNA-1:exon:5183;Parent=Msa0672570-mRNA-1 |
| chr4_4 | five_prime_UTR | 17716294 | 17716357 | 17716294 | ID=Msa0672570-mRNA-1:five_prime_utr;Parent=Msa0672570-mRNA-1 |
| chr4_4 | five_prime_UTR | 17715469 | 17715480 | 17715469 | ID=Msa0672570-mRNA-1:five_prime_utr;Parent=Msa0672570-mRNA-1 |
| chr4_4 | CDS | 17715207 | 17715468 | 17715207 | ID=Msa0672570-mRNA-1:cds;Parent=Msa0672570-mRNA-1 |
| chr4_4 | CDS | 17714158 | 17714435 | 17714158 | ID=Msa0672570-mRNA-1:cds;Parent=Msa0672570-mRNA-1 |
| chr4_4 | CDS | 17713285 | 17713452 | 17713285 | ID=Msa0672570-mRNA-1:cds;Parent=Msa0672570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
