AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0588610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0588610 MtrunA17_Chr4g0004821 97.484 477 12 0 1 477 1 477 0.0 932
Msa0588610 MtrunA17_Chr6g0486021 67.573 478 149 1 5 476 13 490 0.0 641
Msa0588610 MtrunA17_Chr3g0119401 41.830 459 264 3 20 475 77 535 2.95e-116 352
Msa0588610 MtrunA17_Chr7g0250881 41.304 460 266 2 17 472 43 502 2.60e-115 348
Msa0588610 MtrunA17_Chr6g0457781 39.958 473 270 3 14 472 70 542 1.18e-110 338
Msa0588610 MtrunA17_Chr4g0032021 29.058 499 319 9 2 473 65 555 6.25e-52 184
Msa0588610 MtrunA17_Chr1g0155221 31.236 445 279 10 40 469 53 485 2.32e-51 181
Msa0588610 MtrunA17_Chr1g0213631 30.947 433 280 6 53 470 2 430 4.20e-51 180
Msa0588610 MtrunA17_Chr8g0373181 29.754 447 288 10 40 472 51 485 1.30e-50 179
Msa0588610 MtrunA17_Chr7g0214451 29.385 439 300 5 42 470 39 477 2.01e-49 176
Msa0588610 MtrunA17_Chr7g0273281 29.464 448 281 8 41 472 67 495 2.92e-48 173
Msa0588610 MtrunA17_Chr4g0066581 30.405 444 291 10 37 472 53 486 3.36e-46 167
Msa0588610 MtrunA17_Chr4g0039651 29.844 449 278 9 49 469 58 497 2.33e-45 165
Msa0588610 MtrunA17_Chr1g0213611 29.018 448 294 8 42 470 84 526 9.58e-45 164
Msa0588610 MtrunA17_Chr2g0286721 30.405 444 285 11 37 469 50 480 5.48e-44 161
Msa0588610 MtrunA17_Chr2g0282031 30.022 453 282 10 41 470 58 498 1.94e-43 160
Msa0588610 MtrunA17_Chr4g0021771 28.364 483 306 11 16 470 30 500 1.42e-42 158
Msa0588610 MtrunA17_Chr8g0390261 28.354 395 266 7 87 468 95 485 1.74e-41 155
Msa0588610 MtrunA17_Chr7g0259471 29.451 455 274 9 42 474 46 475 9.31e-41 152
Msa0588610 MtrunA17_Chr4g0036021 29.158 463 284 10 41 469 32 484 9.65e-41 153
Msa0588610 MtrunA17_Chr5g0432581 30.621 467 275 15 41 469 24 479 2.19e-40 151
Msa0588610 MtrunA17_Chr8g0373191 28.475 446 277 11 40 473 43 458 2.87e-40 150
Msa0588610 MtrunA17_Chr7g0259221 28.543 501 294 12 3 474 12 477 5.63e-39 147
Msa0588610 MtrunA17_Chr6g0486681 26.862 376 264 6 103 468 111 485 8.69e-39 147
Msa0588610 MtrunA17_Chr6g0486671 26.862 376 264 6 103 468 111 485 8.69e-39 147
Msa0588610 MtrunA17_Chr8g0390141 26.638 458 303 8 41 468 31 485 1.58e-38 147
Msa0588610 MtrunA17_Chr8g0390521 29.645 479 297 13 17 469 4 468 2.50e-38 145
Msa0588610 MtrunA17_Chr8g0373531 27.959 490 301 14 17 470 7 480 5.54e-38 145
Msa0588610 MtrunA17_Chr6g0485661 28.460 513 294 16 3 464 12 502 7.08e-38 145
Msa0588610 MtrunA17_Chr2g0303731 32.335 334 211 6 33 352 21 353 2.37e-37 144
Msa0588610 MtrunA17_Chr3g0144361 26.735 490 318 10 18 469 2 488 3.04e-37 143
Msa0588610 MtrunA17_Chr5g0394341 25.508 443 309 8 42 468 46 483 5.27e-37 142
Msa0588610 MtrunA17_Chr4g0034681 26.722 479 311 10 20 469 21 488 3.06e-35 137
Msa0588610 MtrunA17_Chr3g0115711 25.380 461 305 9 41 468 28 482 3.48e-35 137
Msa0588610 MtrunA17_Chr3g0115721 26.022 465 302 11 41 470 28 485 2.35e-34 135
Msa0588610 MtrunA17_Chr4g0065311 25.113 442 312 7 42 470 45 480 3.44e-34 134
Msa0588610 MtrunA17_Chr1g0205691 25.000 448 321 7 42 476 46 491 7.11e-34 134
Msa0588610 MtrunA17_Chr2g0290181 27.859 341 226 6 32 352 17 357 1.83e-31 127
Msa0588610 MtrunA17_Chr8g0376611 32.374 278 178 3 80 347 4 281 3.56e-31 125
Msa0588610 MtrunA17_Chr3g0115751 25.413 484 322 9 20 468 9 488 5.23e-31 125
Msa0588610 MtrunA17_Chr4g0065324 25.676 444 311 11 42 472 53 490 7.83e-31 124
Msa0588610 MtrunA17_Chr3g0115781 25.161 465 306 12 41 470 30 487 7.90e-31 124
Msa0588610 MtrunA17_Chr3g0078971 25.635 394 275 7 90 469 95 484 8.69e-31 124
Msa0588610 MtrunA17_Chr3g0115741 25.806 465 299 11 41 468 31 486 8.78e-31 124
Msa0588610 MtrunA17_Chr8g0376631 30.408 319 207 4 37 342 27 343 2.43e-30 124
Msa0588610 MtrunA17_Chr1g0205681 23.025 443 321 7 42 465 47 488 1.07e-29 121
Msa0588610 MtrunA17_Chr1g0205671 23.028 469 323 9 41 476 28 491 1.35e-28 118
Msa0588610 MtrunA17_Chr5g0403831 24.675 462 312 9 40 469 35 492 1.67e-28 118
Msa0588610 MtrunA17_Chr3g0078991 25.063 395 279 9 89 469 94 485 3.28e-28 117
Msa0588610 MtrunA17_Chr3g0128081 25.606 371 250 6 118 469 123 486 1.08e-27 115
Msa0588610 MtrunA17_Chr5g0420841 23.834 386 280 5 98 470 102 486 1.14e-27 115
Msa0588610 MtrunA17_Chr3g0078791 24.595 370 233 7 118 468 68 410 3.43e-27 113
Msa0588610 MtrunA17_Chr1g0164851 25.445 393 280 5 88 469 94 484 4.00e-27 114
Msa0588610 MtrunA17_Chr3g0128171 24.379 443 315 8 45 470 1 440 4.08e-27 113
Msa0588610 MtrunA17_Chr5g0445601 25.635 394 271 6 90 468 98 484 4.20e-27 114
Msa0588610 MtrunA17_Chr1g0164871 25.191 393 281 5 88 469 94 484 4.29e-27 114
Msa0588610 MtrunA17_Chr2g0303701 28.571 336 230 5 33 358 21 356 7.07e-27 114
Msa0588610 MtrunA17_Chr5g0417611 23.649 444 318 8 42 468 47 486 1.33e-26 112
Msa0588610 MtrunA17_Chr3g0121674 29.268 287 181 6 200 470 4 284 2.69e-26 108
Msa0588610 MtrunA17_Chr7g0257631 25.326 383 270 5 98 468 140 518 2.62e-25 108
Msa0588610 MtrunA17_Chr4g0048411 23.684 380 276 6 103 469 108 486 1.16e-24 107
Msa0588610 MtrunA17_Chr8g0376601 29.102 323 218 4 37 348 27 349 1.79e-24 106
Msa0588610 MtrunA17_Chr3g0085971 23.490 447 319 8 42 470 45 486 6.39e-24 104
Msa0588610 MtrunA17_Chr3g0115731 25.954 393 238 12 96 470 107 464 2.06e-23 102
Msa0588610 MtrunA17_Chr7g0273261 30.638 235 153 5 242 472 9 237 2.66e-23 99.0
Msa0588610 MtrunA17_Chr5g0437021 24.263 441 318 8 42 469 47 484 3.98e-23 102
Msa0588610 MtrunA17_Chr4g0048051 22.767 347 249 5 103 433 108 451 7.72e-23 101
Msa0588610 MtrunA17_Chr2g0290161 26.103 272 162 6 94 352 19 264 1.01e-21 97.8
Msa0588610 MtrunA17_Chr5g0404191 30.415 217 141 4 40 254 54 262 2.60e-19 88.6
Msa0588610 MtrunA17_Chr5g0434231 32.704 159 83 1 80 238 7 141 5.90e-18 80.9
Msa0588610 MtrunA17_Chr4g0065351 25.228 329 222 8 156 468 1 321 7.44e-18 85.1
Msa0588610 MtrunA17_Chr5g0407441 30.542 203 133 4 41 238 9 208 3.25e-17 84.7
Msa0588610 MtrunA17_Chr7g0273271 32.203 177 111 3 47 222 38 206 3.77e-17 80.1
Msa0588610 MtrunA17_Chr3g0146061 29.469 207 133 1 275 468 517 723 1.49e-16 82.8
Msa0588610 MtrunA17_Chr3g0146061 28.095 210 147 3 47 253 15 223 1.47e-14 76.3
Msa0588610 MtrunA17_Chr3g0144261 29.767 215 147 3 41 253 9 221 1.19e-15 79.7
Msa0588610 MtrunA17_Chr3g0144261 29.665 209 132 3 273 468 507 713 3.72e-15 78.2
Msa0588610 MtrunA17_Chr5g0419321 31.098 164 111 2 77 238 73 236 1.78e-15 79.3
Msa0588610 MtrunA17_Chr8g0370151 27.053 207 138 1 275 468 138 344 8.85e-14 72.8
Msa0588610 MtrunA17_Chr5g0404181 34.615 104 63 2 371 472 31 131 9.20e-13 65.5
Msa0588610 MtrunA17_Chr8g0370141 25.871 201 145 3 43 240 11 210 1.29e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0588610 AT1G79820.2 68.802 484 141 3 1 475 11 493 0.0 666
Msa0588610 AT1G79820.1 68.802 484 141 3 1 475 11 493 0.0 666
Msa0588610 AT1G67300.1 67.083 480 149 3 5 475 13 492 0.0 619
Msa0588610 AT1G67300.3 67.083 480 149 3 5 475 13 492 0.0 619
Msa0588610 AT1G67300.2 66.736 481 150 4 5 475 13 493 0.0 613
Msa0588610 AT1G79820.4 68.075 426 126 3 1 417 11 435 0.0 583
Msa0588610 AT1G79820.3 61.570 484 128 4 1 475 11 445 0.0 574
Msa0588610 AT1G67300.6 66.588 422 132 3 5 417 13 434 0.0 554
Msa0588610 AT1G67300.7 66.588 422 132 3 5 417 13 434 0.0 554
Msa0588610 AT1G67300.4 66.427 417 131 3 5 412 13 429 0.0 543
Msa0588610 AT1G67300.5 66.427 417 131 3 5 412 13 429 0.0 543
Msa0588610 AT1G79820.5 59.944 357 95 1 119 475 75 383 1.60e-143 416
Msa0588610 AT1G05030.1 43.656 465 258 3 16 476 57 521 1.02e-123 371
Msa0588610 AT1G05030.2 43.735 423 236 2 56 476 47 469 1.34e-111 338
Msa0588610 AT5G16150.2 40.830 458 270 1 16 472 85 542 2.03e-110 337
Msa0588610 AT5G16150.1 40.830 458 270 1 16 472 85 542 2.03e-110 337
Msa0588610 AT5G16150.3 40.830 458 270 1 16 472 85 542 2.03e-110 337
Msa0588610 AT1G54730.2 31.320 447 272 9 42 472 38 465 1.49e-52 184
Msa0588610 AT1G19450.1 32.071 449 269 11 40 469 53 484 6.14e-51 180
Msa0588610 AT1G75220.1 33.038 451 262 12 40 469 52 483 6.81e-51 180
Msa0588610 AT1G08930.1 29.363 487 308 13 3 477 33 495 1.26e-46 169
Msa0588610 AT1G08930.2 29.363 487 308 13 3 477 33 495 1.26e-46 169
Msa0588610 AT1G54730.5 30.455 440 264 11 42 472 38 444 2.20e-46 167
Msa0588610 AT5G59250.1 29.185 466 302 6 33 473 95 557 2.55e-46 169
Msa0588610 AT2G48020.2 30.591 474 295 12 8 469 7 458 2.25e-45 165
Msa0588610 AT2G48020.1 30.591 474 295 12 8 469 7 458 2.25e-45 165
Msa0588610 AT5G17010.1 29.652 489 299 10 9 469 28 499 2.86e-45 165
Msa0588610 AT5G17010.3 29.652 489 299 10 9 469 28 499 2.86e-45 165
Msa0588610 AT5G17010.4 29.652 489 299 10 9 469 28 499 2.86e-45 165
Msa0588610 AT1G54730.3 31.095 402 241 9 42 426 38 420 1.03e-44 162
Msa0588610 AT2G43330.1 29.864 442 298 6 40 469 35 476 1.28e-44 164
Msa0588610 AT3G05160.1 29.060 468 312 9 10 472 2 454 3.05e-43 159
Msa0588610 AT3G05160.3 30.534 393 261 6 85 472 20 405 1.04e-42 156
Msa0588610 AT3G05160.2 30.534 393 261 6 85 472 20 405 1.04e-42 156
Msa0588610 AT5G18840.1 29.536 474 299 12 10 469 23 475 2.11e-42 157
Msa0588610 AT3G05165.3 28.390 472 313 10 9 472 9 463 3.39e-42 156
Msa0588610 AT3G05165.2 28.390 472 313 10 9 472 9 463 3.39e-42 156
Msa0588610 AT3G05165.1 28.390 472 313 10 9 472 9 463 3.39e-42 156
Msa0588610 AT2G20780.1 28.690 481 302 12 17 470 32 498 1.85e-41 155
Msa0588610 AT1G54730.9 29.949 394 240 9 42 419 38 411 2.64e-40 150
Msa0588610 AT1G54730.7 29.949 394 240 9 42 419 38 411 2.64e-40 150
Msa0588610 AT3G03090.1 27.033 492 310 13 8 469 27 499 7.18e-40 150
Msa0588610 AT1G08900.1 29.977 437 283 8 47 473 36 459 7.62e-40 150
Msa0588610 AT1G08900.2 29.977 437 283 8 47 473 36 459 7.62e-40 150
Msa0588610 AT4G04760.1 28.698 453 297 10 30 469 25 464 1.24e-39 149
Msa0588610 AT5G27360.1 28.721 477 321 7 4 475 9 471 1.29e-39 149
Msa0588610 AT1G08900.5 30.730 397 254 7 87 473 32 417 1.67e-39 148
Msa0588610 AT3G18830.1 27.235 481 310 11 23 469 21 495 1.98e-39 150
Msa0588610 AT3G05155.1 29.176 449 263 10 46 469 37 455 2.00e-39 148
Msa0588610 AT1G08900.3 30.730 397 254 7 87 473 66 451 3.11e-39 148
Msa0588610 AT5G27360.3 28.721 477 321 7 4 475 57 519 4.42e-39 149
Msa0588610 AT1G54730.4 30.203 394 234 10 42 426 38 399 1.33e-38 145
Msa0588610 AT3G05150.2 27.253 455 291 8 41 476 40 473 7.32e-38 144
Msa0588610 AT3G05150.1 27.679 448 284 8 41 469 40 466 1.05e-37 144
Msa0588610 AT3G05150.3 27.679 448 284 8 41 469 40 466 1.05e-37 144
Msa0588610 AT1G08890.1 28.078 463 310 8 19 472 12 460 1.47e-37 143
Msa0588610 AT3G20460.1 26.802 444 286 10 47 472 64 486 2.54e-37 143
Msa0588610 AT3G05400.1 27.872 470 301 11 16 473 17 460 4.39e-37 142
Msa0588610 AT1G08920.1 28.074 488 310 10 1 472 3 465 1.02e-36 141
Msa0588610 AT4G04760.3 28.250 400 265 8 82 469 16 405 1.11e-36 140
Msa0588610 AT2G20780.2 29.064 406 253 9 88 470 47 440 1.99e-36 140
Msa0588610 AT4G36670.1 26.875 480 309 12 25 469 4 476 2.17e-36 140
Msa0588610 AT3G05165.6 28.070 456 302 11 9 455 9 447 3.68e-36 140
Msa0588610 AT5G26340.1 26.357 387 271 6 94 468 100 484 1.89e-35 138
Msa0588610 AT4G04750.1 28.097 452 282 9 42 472 42 471 2.35e-35 137
Msa0588610 AT4G04750.2 28.097 452 282 9 42 472 42 471 2.35e-35 137
Msa0588610 AT1G08920.2 27.879 495 309 11 1 472 3 472 2.95e-35 137
Msa0588610 AT4G04760.2 27.556 450 303 10 30 469 25 461 3.54e-35 137
Msa0588610 AT2G16130.1 27.347 490 311 11 18 469 4 486 4.15e-35 137
Msa0588610 AT4G04750.3 28.118 441 296 8 42 472 86 515 5.69e-35 137
Msa0588610 AT3G19940.1 24.289 457 316 7 41 468 30 485 1.14e-34 136
Msa0588610 AT5G27350.1 27.872 470 316 8 13 475 14 467 1.35e-34 135
Msa0588610 AT1G54730.8 28.941 387 232 11 42 419 38 390 3.09e-34 133
Msa0588610 AT1G54730.11 30.968 310 191 6 42 342 38 333 1.23e-33 130
Msa0588610 AT5G27360.2 30.685 365 242 5 116 475 9 367 1.58e-33 130
Msa0588610 AT5G27360.5 30.685 365 242 5 116 475 9 367 1.58e-33 130
Msa0588610 AT3G19930.1 25.888 394 279 4 88 469 92 484 1.71e-33 133
Msa0588610 AT3G19930.2 25.888 394 279 4 88 469 92 484 1.71e-33 133
Msa0588610 AT1G77210.2 26.509 381 259 7 103 468 111 485 3.79e-33 132
Msa0588610 AT1G77210.1 26.509 381 259 7 103 468 111 485 3.79e-33 132
Msa0588610 AT3G05165.4 27.338 417 279 9 9 417 9 409 4.83e-33 130
Msa0588610 AT3G05165.5 27.338 417 279 9 9 417 9 409 4.83e-33 130
Msa0588610 AT3G05400.2 27.234 470 284 13 16 473 17 440 6.04e-33 130
Msa0588610 AT1G30220.1 28.249 354 240 6 14 354 5 357 6.32e-33 132
Msa0588610 AT1G30220.1 36.000 100 64 0 370 469 454 553 2.53e-11 66.2
Msa0588610 AT2G16120.1 27.049 488 310 12 20 469 7 486 2.31e-32 129
Msa0588610 AT2G18480.1 26.490 453 292 10 50 469 36 480 2.78e-32 129
Msa0588610 AT2G35740.1 27.914 326 221 4 37 348 27 352 4.95e-32 129
Msa0588610 AT1G08920.3 27.964 447 282 9 1 431 3 425 2.19e-31 126
Msa0588610 AT1G08900.4 28.861 395 259 7 47 431 36 418 4.93e-31 124
Msa0588610 AT1G50310.1 24.242 396 283 7 85 468 96 486 5.61e-31 125
Msa0588610 AT2G48020.4 30.663 362 223 10 8 362 7 347 1.06e-30 122
Msa0588610 AT4G16480.2 29.586 338 216 7 32 348 17 353 1.89e-30 125
Msa0588610 AT4G16480.3 29.586 338 216 7 32 348 17 353 1.89e-30 125
Msa0588610 AT4G16480.1 29.586 338 216 7 32 348 17 353 1.89e-30 125
Msa0588610 AT2G48020.3 30.702 342 211 9 8 342 7 329 6.83e-30 120
Msa0588610 AT4G02050.2 25.130 386 271 6 98 470 106 486 5.82e-29 120
Msa0588610 AT4G02050.1 25.130 386 271 6 98 470 106 486 5.82e-29 120
Msa0588610 AT5G23270.1 23.974 463 312 9 41 468 29 486 9.71e-29 119
Msa0588610 AT4G21480.1 22.811 491 333 7 13 469 6 484 1.28e-28 119
Msa0588610 AT3G05155.2 30.351 313 178 6 46 342 37 325 2.65e-28 115
Msa0588610 AT1G54730.10 30.961 281 171 6 42 313 38 304 3.23e-28 114
Msa0588610 AT1G54730.6 30.961 281 171 6 42 313 38 304 3.23e-28 114
Msa0588610 AT1G11260.1 23.251 443 320 6 42 468 47 485 5.56e-28 117
Msa0588610 AT5G26250.1 23.195 457 322 7 40 469 26 480 6.83e-27 114
Msa0588610 AT1G07340.1 22.588 456 323 7 41 468 28 481 1.14e-26 113
Msa0588610 AT5G17010.2 26.216 473 276 13 9 469 25 436 2.58e-26 111
Msa0588610 AT5G27360.4 28.571 350 235 5 4 351 9 345 2.93e-26 111
Msa0588610 AT1G50310.2 24.545 330 236 6 151 468 15 343 8.34e-26 108
Msa0588610 AT5G61520.2 25.067 375 271 6 103 468 66 439 9.20e-26 110
Msa0588610 AT5G61520.1 25.067 375 271 6 103 468 114 487 1.54e-25 109
Msa0588610 AT1G34580.2 25.995 377 259 8 103 462 58 431 1.88e-24 106
Msa0588610 AT1G77210.3 25.826 333 226 7 151 468 10 336 2.52e-24 104
Msa0588610 AT1G34580.1 25.995 377 259 8 103 462 108 481 3.53e-24 105
Msa0588610 AT3G05960.1 22.368 456 327 6 40 469 25 479 9.11e-24 104
Msa0588610 AT3G51490.2 30.435 207 131 2 275 468 510 716 2.08e-17 85.9
Msa0588610 AT3G51490.2 29.268 205 137 4 41 240 9 210 5.31e-15 78.2
Msa0588610 AT1G20840.2 32.367 207 127 2 275 468 509 715 2.32e-17 85.5
Msa0588610 AT1G20840.2 29.148 223 138 6 41 253 9 221 4.78e-14 75.1
Msa0588610 AT1G20840.1 32.367 207 127 2 275 468 509 715 2.32e-17 85.5
Msa0588610 AT1G20840.1 29.148 223 138 6 41 253 9 221 4.78e-14 75.1
Msa0588610 AT3G51490.3 30.435 207 131 2 275 468 460 666 2.37e-17 85.5
Msa0588610 AT3G51490.3 31.447 159 101 4 87 240 5 160 2.27e-11 66.6
Msa0588610 AT4G35300.5 28.502 207 135 1 275 468 319 525 9.43e-16 80.1
Msa0588610 AT4G35300.9 28.502 207 135 1 275 468 506 712 9.69e-16 80.5
Msa0588610 AT4G35300.9 27.778 216 140 4 47 253 15 223 7.70e-15 77.8
Msa0588610 AT4G35300.2 28.502 207 135 1 275 468 506 712 9.69e-16 80.5
Msa0588610 AT4G35300.2 27.778 216 140 4 47 253 15 223 7.70e-15 77.8
Msa0588610 AT4G35300.3 28.502 207 135 1 275 468 506 712 9.69e-16 80.5
Msa0588610 AT4G35300.3 27.778 216 140 4 47 253 15 223 7.70e-15 77.8
Msa0588610 AT4G35300.4 28.502 207 135 1 275 468 516 722 9.95e-16 80.5
Msa0588610 AT4G35300.4 27.778 216 140 4 47 253 15 223 7.11e-15 77.8
Msa0588610 AT4G35300.8 28.502 207 135 1 275 468 516 722 9.95e-16 80.5
Msa0588610 AT4G35300.8 27.778 216 140 4 47 253 15 223 7.11e-15 77.8
Msa0588610 AT4G35300.6 28.502 207 135 1 275 468 516 722 9.95e-16 80.5
Msa0588610 AT4G35300.6 27.778 216 140 4 47 253 15 223 7.11e-15 77.8
Msa0588610 AT4G35300.11 28.502 207 135 1 275 468 516 722 9.95e-16 80.5
Msa0588610 AT4G35300.11 27.778 216 140 4 47 253 15 223 7.11e-15 77.8
Msa0588610 AT4G35300.1 28.502 207 135 1 275 468 516 722 9.95e-16 80.5
Msa0588610 AT4G35300.1 27.778 216 140 4 47 253 15 223 7.11e-15 77.8
Msa0588610 AT4G35300.10 28.502 207 135 1 275 468 516 722 9.95e-16 80.5
Msa0588610 AT4G35300.10 27.778 216 140 4 47 253 15 223 7.11e-15 77.8
Msa0588610 AT4G35300.7 28.502 207 135 1 275 468 516 722 9.95e-16 80.5
Msa0588610 AT4G35300.7 27.778 216 140 4 47 253 15 223 7.11e-15 77.8
Msa0588610 AT3G51490.1 29.268 205 137 4 41 240 9 210 5.81e-15 78.2
Msa0588610 AT3G51490.1 29.146 199 136 2 275 468 510 708 6.68e-15 77.8
Msa0588610 AT1G20860.1 22.763 514 320 20 23 469 2 505 3.74e-11 65.9
Msa0588610 AT1G20860.2 22.780 518 323 20 19 469 50 557 3.99e-11 65.9

Find 147 sgRNAs with CRISPR-Local

Find 463 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTATATGGCTACCATAT+TGG 0.196867 4_2:+11002464 Msa0588610:CDS
ATCTCTTTGGGGCATGCTTT+TGG 0.208633 4_2:+11003201 Msa0588610:CDS
TGTAGGAATATGCAATTTAT+TGG 0.226449 4_2:+11005611 Msa0588610:CDS
ATACCAACCAACTATTTCTT+TGG 0.235451 4_2:-11003637 None:intergenic
CCAGCTGTGCGGGGTACATA+TGG 0.255578 4_2:+11003552 Msa0588610:CDS
TCTATTTCCTCATTCTTATA+TGG 0.262817 4_2:+11002452 Msa0588610:CDS
TGCAGGACTAGACAAATTAA+AGG 0.306806 4_2:+11007368 Msa0588610:three_prime_UTR
TCTTATATGGCTACCATATT+GGG 0.308240 4_2:+11002465 Msa0588610:CDS
GTGCAACATCAAAATCTCTT+TGG 0.308324 4_2:+11003188 Msa0588610:intron
AGATCCTATTCAGCTCATTT+AGG 0.308655 4_2:-11007135 None:intergenic
TCAGCTACCTTTGAAAGCTT+TGG 0.312153 4_2:+11005561 Msa0588610:CDS
ATCATGGGTTCGCTCTTTAT+AGG 0.319768 4_2:+11003606 Msa0588610:CDS
TTGATTTAAAATATAATTGC+AGG 0.336091 4_2:+11007351 Msa0588610:three_prime_UTR
TGCAACATCAAAATCTCTTT+GGG 0.336248 4_2:+11003189 Msa0588610:CDS
GGAAGGTTATTTGTTGGTAC+TGG 0.361961 4_2:+11003223 Msa0588610:CDS
ATAGCCTAAATGAGCTGAAT+AGG 0.365997 4_2:+11007131 Msa0588610:exon
TGTGCTTTGCCTATGATCAT+TGG 0.370781 4_2:+11002843 Msa0588610:CDS
ATCTATAGAAATGCTCTCTA+AGG 0.371450 4_2:-11002592 None:intergenic
TTTGCGCATGCTGGAACAAA+TGG 0.376467 4_2:+11006980 Msa0588610:CDS
AAGCTCTCAGAAATATTGTT+TGG 0.379026 4_2:+11005285 Msa0588610:CDS
GATCTTGCCAGGTAATATTT+CGG 0.383696 4_2:-11006277 None:intergenic
CAGCTGTGCGGGGTACATAT+GGG 0.386118 4_2:+11003553 Msa0588610:CDS
ATCTCATATGGATGAGGTAT+AGG 0.387224 4_2:+11007154 Msa0588610:three_prime_UTR
TTATTTGTTGGTACTGGAAT+GGG 0.388906 4_2:+11003229 Msa0588610:CDS
TTTGTCAGTTCACTCATTGC+AGG 0.392399 4_2:-11005231 None:intergenic
AGAGCGCCGCCAACAAGGTT+TGG 0.392731 4_2:-11002408 None:intergenic
CAACCAACTATTTCTTTGGC+TGG 0.395720 4_2:-11003633 None:intergenic
GAAGCGTATCATACCCAATA+TGG 0.399405 4_2:-11002478 None:intergenic
AAATTCAGCCTCAGCTTCAA+TGG 0.400060 4_2:-11005178 None:intergenic
GTAGGAATATGCAATTTATT+GGG 0.400286 4_2:+11005612 Msa0588610:CDS
AGTTGTATGTTACACAATCT+TGG 0.401761 4_2:-11000471 None:intergenic
TGCAACATGTCTTGGAATCA+TGG 0.406095 4_2:+11003590 Msa0588610:CDS
GGTGGATAGCAGATGGGGTT+GGG 0.411862 4_2:+11002799 Msa0588610:CDS
CTCTTTGCGGCATGTAATAG+TGG 0.413355 4_2:+11002427 Msa0588610:CDS
ACTGTTGTGAGGTTTGTATA+AGG 0.415712 4_2:+11000907 Msa0588610:five_prime_UTR
TCTATAACTCATTCAACAAA+TGG 0.425580 4_2:-11007186 None:intergenic
AGTTCTTATGCATCAGGATC+TGG 0.426307 4_2:+11006001 Msa0588610:CDS
TTGCGTAAGAACGAAATCTA+TGG 0.432351 4_2:+11000428 Msa0588610:five_prime_UTR
TTCAGTGGGTGGATAGCAGA+TGG 0.433775 4_2:+11002792 Msa0588610:CDS
GGCAAAATTTCATGTTAAAG+AGG 0.435069 4_2:-11007243 None:intergenic
GCTGCAAGTTCTTATGCATC+AGG 0.435425 4_2:+11005995 Msa0588610:CDS
GTTGGTACTGGAATGGGACT+TGG 0.437679 4_2:+11003235 Msa0588610:CDS
ACTCAGATTGCAACATGTCT+TGG 0.438236 4_2:+11003582 Msa0588610:CDS
GGTCTCACCTCCAGCTGTGC+GGG 0.440429 4_2:+11003542 Msa0588610:intron
TTTGGTGTATCATCAAAGAT+AGG 0.447088 4_2:+11005579 Msa0588610:CDS
TCTCATATGGATGAGGTATA+GGG 0.447417 4_2:+11007155 Msa0588610:three_prime_UTR
ATTACTGCTCCAATGATCAT+AGG 0.447800 4_2:-11002852 None:intergenic
CCATATGTACCCCGCACAGC+TGG 0.448406 4_2:-11003552 None:intergenic
GCCTTGGCTCTGATCTTGCC+AGG 0.450879 4_2:-11006288 None:intergenic
GGCTGAATTTGAGAAGCTCC+TGG 0.451160 4_2:+11005191 Msa0588610:CDS
TCATAGGCAAAGCACACAAC+TGG 0.451176 4_2:-11002836 None:intergenic
AAATATGTCCTGGAAACAAA+AGG 0.453912 4_2:+11007065 Msa0588610:CDS
AAAAGAGCAAGTGCAGCAGC+AGG 0.455605 4_2:-11004062 None:intergenic
GTTATTTGTTGGTACTGGAA+TGG 0.457514 4_2:+11003228 Msa0588610:CDS
CTTGTTGGCGGCGCTCTTTG+CGG 0.457616 4_2:+11002414 Msa0588610:CDS
AATATGCTTGGCTGTGCATT+GGG 0.458610 4_2:+11006317 Msa0588610:CDS
TTATTGGATCTTCTTTCAGT+GGG 0.459554 4_2:+11002778 Msa0588610:CDS
CTATCATTCGCTCTTGGTGC+TGG 0.463436 4_2:+11006231 Msa0588610:CDS
GCCTGTTGCAGCTCTTTATG+TGG 0.463448 4_2:+11003261 Msa0588610:CDS
CAAGCATATTGCCATTGCCT+TGG 0.466824 4_2:-11006304 None:intergenic
TTCTGAGAGCTTCATTGTGC+CGG 0.470849 4_2:-11005274 None:intergenic
ATTATTTAGGCAGTAACAAT+GGG 0.475993 4_2:+11005959 Msa0588610:intron
GCCACATAAAGAGCTGCAAC+AGG 0.476023 4_2:-11003262 None:intergenic
GAGAGCATTTCTATAGATCT+CGG 0.479132 4_2:+11002597 Msa0588610:CDS
CTATAGATCTCGGCTTTAGT+GGG 0.479517 4_2:+11002607 Msa0588610:CDS
TTGGATCTTCTTTCAGTGGG+TGG 0.481996 4_2:+11002781 Msa0588610:CDS
GACATGAGGAGACAAGGAAC+TGG 0.482431 4_2:-11006255 None:intergenic
CTTGTAGTAAGTATATGTTT+AGG 0.485985 4_2:+11002747 Msa0588610:CDS
CAAGGCAATGGCAATATGCT+TGG 0.487871 4_2:+11006305 Msa0588610:CDS
TCAGTGGGTGGATAGCAGAT+GGG 0.488350 4_2:+11002793 Msa0588610:CDS
TTTATTGGATCTTCTTTCAG+TGG 0.488684 4_2:+11002777 Msa0588610:CDS
GAGCTGAATAGGATCTCATA+TGG 0.488872 4_2:+11007142 Msa0588610:three_prime_UTR
AGTTATTTCGATGATTCTGA+TGG 0.489140 4_2:+11005732 Msa0588610:CDS
CTCATGTCCGAAATATTACC+TGG 0.493783 4_2:+11006270 Msa0588610:CDS
GATAGTAAAGATGAAAATCC+AGG 0.496030 4_2:+11000994 Msa0588610:CDS
CGCAAAGAGCGCCGCCAACA+AGG 0.501285 4_2:-11002413 None:intergenic
GCAGGACTAGACAAATTAAA+GGG 0.501976 4_2:+11007369 Msa0588610:three_prime_UTR
AGCTGTGCGGGGTACATATG+GGG 0.502643 4_2:+11003554 Msa0588610:CDS
TTTGCTTTGCAGCAACTGTC+CGG 0.503212 4_2:+11005513 Msa0588610:CDS
TCTATAGATCTCGGCTTTAG+TGG 0.507105 4_2:+11002606 Msa0588610:CDS
TTGCGCATGCTGGAACAAAT+GGG 0.508331 4_2:+11006981 Msa0588610:CDS
CAGGTGATAAACTTCTTCGT+GGG 0.508596 4_2:+11006948 Msa0588610:intron
AACCAACTATTTCTTTGGCT+GGG 0.508633 4_2:-11003632 None:intergenic
CAATATGCTTGGCTGTGCAT+TGG 0.508935 4_2:+11006316 Msa0588610:CDS
TGCAGCTCTTTATGTGGCTG+AGG 0.513136 4_2:+11003267 Msa0588610:CDS
AAGATAGGAAACACATGTGT+AGG 0.514546 4_2:+11005594 Msa0588610:CDS
CGGCTTTAGTGGGGATACAT+TGG 0.518216 4_2:+11002617 Msa0588610:CDS
ATATAAGAATGAGGAAATAG+AGG 0.519258 4_2:-11002450 None:intergenic
ACAGGTGATAAACTTCTTCG+TGG 0.521424 4_2:+11006947 Msa0588610:intron
GGGTGGATAGCAGATGGGGT+TGG 0.522864 4_2:+11002798 Msa0588610:CDS
GCAACATGTCTTGGAATCAT+GGG 0.528820 4_2:+11003591 Msa0588610:CDS
CATAAAGAGCTGCAACAGGC+GGG 0.531039 4_2:-11003258 None:intergenic
TACAGAGTGCCAAACCTTGT+TGG 0.531861 4_2:+11002399 Msa0588610:CDS
CTAGACAAATTAAAGGGATG+AGG 0.535122 4_2:+11007375 Msa0588610:three_prime_UTR
TATTATTTAGGCAGTAACAA+TGG 0.536062 4_2:+11005958 Msa0588610:intron
CAGTGGGTGGATAGCAGATG+GGG 0.539241 4_2:+11002794 Msa0588610:CDS
TCTGACAGAGGTGATGAGTC+CGG 0.542164 4_2:+11005255 Msa0588610:CDS
TCTGTGCAGAGAGTCCTCAT+TGG 0.546021 4_2:+11004093 Msa0588610:CDS
ATGATTCTGATGGATAAACT+TGG 0.546268 4_2:+11005742 Msa0588610:CDS
TATGTGCTATCATTCGCTCT+TGG 0.550439 4_2:+11006225 Msa0588610:CDS
AATATGTCCTGGAAACAAAA+GGG 0.553941 4_2:+11007066 Msa0588610:CDS
TGGTGCAGGAATTTGTTGAA+AGG 0.554963 4_2:+11000882 Msa0588610:intron
ATCCCAGCCAAAGAAATAGT+TGG 0.564233 4_2:+11003630 Msa0588610:CDS
ACATAAAGAGCTGCAACAGG+CGG 0.567818 4_2:-11003259 None:intergenic
AACAAAAGGGAAGTCACTGC+AGG 0.569265 4_2:+11007079 Msa0588610:CDS
GTAGTAAGTATATGTTTAGG+AGG 0.569409 4_2:+11002750 Msa0588610:CDS
TAACATTTAAGCTAATACAA+TGG 0.572681 4_2:-11007264 None:intergenic
GTTTCACATGTAGTCCTCCC+AGG 0.576479 4_2:-11005209 None:intergenic
ATGGTAGCCATATAAGAATG+AGG 0.582320 4_2:-11002459 None:intergenic
AGAGTGCCAAACCTTGTTGG+CGG 0.585760 4_2:+11002402 Msa0588610:CDS
AAGACAGCGAGTCGCATCAA+GGG 0.588707 4_2:+11000954 Msa0588610:CDS
AATAGGATCTCATATGGATG+AGG 0.589640 4_2:+11007148 Msa0588610:three_prime_UTR
TAGACAAATTAAAGGGATGA+GGG 0.589850 4_2:+11007376 Msa0588610:three_prime_UTR
GCTGAATTTGAGAAGCTCCT+GGG 0.590081 4_2:+11005192 Msa0588610:CDS
TTGACCTTGAAAAGCCAATG+AGG 0.591069 4_2:-11004107 None:intergenic
TGATACACCAAAGCTTTCAA+AGG 0.591297 4_2:-11005568 None:intergenic
ATAGAAAACAGCATTTATGC+CGG 0.592130 4_2:-11005532 None:intergenic
GAAGACAGCGAGTCGCATCA+AGG 0.593518 4_2:+11000953 Msa0588610:CDS
GCAGTTGAAGAAGAAGAAGA+AGG 0.594386 4_2:-11000502 None:intergenic
AGGAAGAACCATTGAAGCTG+AGG 0.595656 4_2:+11005170 Msa0588610:CDS
TGAAGTGTAAAATTTGATGA+TGG 0.598972 4_2:-11000524 None:intergenic
GGAAGGAAAGTGCTTCTCCT+CGG 0.603741 4_2:+11005763 Msa0588610:CDS
TGATCATTGGAGCAGTAATG+AGG 0.609046 4_2:+11002856 Msa0588610:CDS
CAAGATCAGAGCCAAGGCAA+TGG 0.609101 4_2:+11006293 Msa0588610:CDS
GTCTCACCTCCAGCTGTGCG+GGG 0.609230 4_2:+11003543 Msa0588610:CDS
CAGCCAAAGAAATAGTTGGT+TGG 0.609989 4_2:+11003634 Msa0588610:CDS
ACCTGGCAAGATCAGAGCCA+AGG 0.610725 4_2:+11006287 Msa0588610:CDS
TTCTGATGGATAAACTTGGA+AGG 0.614483 4_2:+11005746 Msa0588610:CDS
GCTGTGCGGGGTACATATGG+GGG 0.618608 4_2:+11003555 Msa0588610:CDS
AGGTCTCACCTCCAGCTGTG+CGG 0.619413 4_2:+11003541 Msa0588610:intron
CAGGTAATATTTCGGACATG+AGG 0.619698 4_2:-11006269 None:intergenic
AGTGGGGATACATTGGCTGA+AGG 0.623427 4_2:+11002624 Msa0588610:CDS
TATGTACCCCGCACAGCTGG+AGG 0.625032 4_2:-11003549 None:intergenic
TATAGATCTCGGCTTTAGTG+GGG 0.626366 4_2:+11002608 Msa0588610:CDS
TATGATATATACCTCTGGCA+TGG 0.626896 4_2:-11005311 None:intergenic
TTGTTTGGCTGCCATGCCAG+AGG 0.628196 4_2:+11005300 Msa0588610:CDS
ATTTCGGACATGAGGAGACA+AGG 0.640701 4_2:-11006261 None:intergenic
GGAGCAATGTATCTATCCGT+CGG 0.642647 4_2:+11006022 Msa0588610:CDS
AGGTGATAAACTTCTTCGTG+GGG 0.650610 4_2:+11006949 Msa0588610:intron
TTACAGCAACATGCCACCGA+CGG 0.651122 4_2:-11006038 None:intergenic
AAAGAGCAAGTGCAGCAGCA+GGG 0.652349 4_2:-11004061 None:intergenic
TTACAACATCATCAATAACA+AGG 0.664774 4_2:+11000614 Msa0588610:five_prime_UTR
GTTGAAAGGTAACTGTTGTG+AGG 0.664839 4_2:+11000896 Msa0588610:five_prime_UTR
GCAACATCAAAATCTCTTTG+GGG 0.686129 4_2:+11003190 Msa0588610:CDS
GCAATGTATCTATCCGTCGG+TGG 0.687913 4_2:+11006025 Msa0588610:CDS
GAATTTGAGAAGCTCCTGGG+AGG 0.692091 4_2:+11005195 Msa0588610:CDS
GAACTGACAAAGTCTGACAG+AGG 0.717407 4_2:+11005243 Msa0588610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTGATTCTAATATAA+AGG - chr4_2:11001392-11001411 None:intergenic 10.0%
!! TATTATGAGATTTATATATT+GGG - chr4_2:11001765-11001784 None:intergenic 10.0%
!! ATATTATGAGATTTATATAT+TGG - chr4_2:11001766-11001785 None:intergenic 10.0%
!! TATATATAAACTAAAAAGAT+CGG + chr4_2:11004304-11004323 Msa0588610:intron 10.0%
!! AAATTGAAGAAATAAAAAAT+AGG - chr4_2:11004393-11004412 None:intergenic 10.0%
!!! TTTTATTTCTTCAATTTTTA+CGG + chr4_2:11004396-11004415 Msa0588610:intron 10.0%
!!! AATTTTTGAAATATTTTTTG+TGG + chr4_2:11005347-11005366 Msa0588610:intron 10.0%
!!! AAGTTTAAAATTATTAATTC+AGG - chr4_2:11005834-11005853 None:intergenic 10.0%
!!! TTTTACTCATTTTATTATTT+AGG + chr4_2:11005946-11005965 Msa0588610:intron 10.0%
!! ATTATGAGATTTATATATTG+GGG - chr4_2:11001764-11001783 None:intergenic 15.0%
!!! TTTCATTTATTTTTCCTAAT+TGG + chr4_2:11002265-11002284 Msa0588610:intron 15.0%
!! AAAATAAATGACAGTTAAAA+AGG - chr4_2:11003755-11003774 None:intergenic 15.0%
!! GCTTTAATTAATACTTAAAA+AGG + chr4_2:11003933-11003952 Msa0588610:intron 15.0%
!! AATTAATACTTAAAAAGGAA+CGG + chr4_2:11003938-11003957 Msa0588610:intron 15.0%
!! AATATCATTTAAATTCACTA+AGG - chr4_2:11004498-11004517 None:intergenic 15.0%
!! TTTATTGAAAGAATAAGAAT+AGG + chr4_2:11004640-11004659 Msa0588610:intron 15.0%
!! AATTAACTACATAATAAGTA+GGG - chr4_2:11004984-11005003 None:intergenic 15.0%
!!! TCAAAAAGAATTTGTTATAA+AGG - chr4_2:11005418-11005437 None:intergenic 15.0%
!! TAAAAGTTGGATAATATTAT+TGG - chr4_2:11005931-11005950 None:intergenic 15.0%
!! ATAATAAAATGAGTAAAAGT+TGG - chr4_2:11005944-11005963 None:intergenic 15.0%
!!! TTACGTTTTCTTAATTATTA+TGG + chr4_2:11006694-11006713 Msa0588610:intron 15.0%
!!! TATGTTTGAAAAAAAAGTTT+TGG + chr4_2:11006866-11006885 Msa0588610:intron 15.0%
!!! TTGATTTAAAATATAATTGC+AGG + chr4_2:11007351-11007370 Msa0588610:three_prime_UTR 15.0%
!!! ACATTGTTATTCCATAAAAT+GGG - chr4_2:11000773-11000792 None:intergenic 20.0%
!!! ATGGAAAAAAGTAATCTTTT+TGG + chr4_2:11000795-11000814 Msa0588610:intron 20.0%
!!! TTTGTTGACATTTTTTTTGT+GGG + chr4_2:11001254-11001273 Msa0588610:intron 20.0%
!! TTAAGGAGTTAAAGAATTAA+AGG + chr4_2:11001523-11001542 Msa0588610:intron 20.0%
!! TTAACTCATCCTTATAAAAT+CGG - chr4_2:11001741-11001760 None:intergenic 20.0%
!!! TTTGAAATGAATTTATAGAG+TGG + chr4_2:11001910-11001929 Msa0588610:intron 20.0%
!! TTGAAATGAATTTATAGAGT+GGG + chr4_2:11001911-11001930 Msa0588610:intron 20.0%
!! ATTATTGAGCTTGTAAAATT+TGG + chr4_2:11002103-11002122 Msa0588610:intron 20.0%
!! TGAACTTTCTTAAACATATA+AGG - chr4_2:11002185-11002204 None:intergenic 20.0%
!! AAATTAGATGATTTCATACA+AGG - chr4_2:11002535-11002554 None:intergenic 20.0%
!! TTCATAAACATACACATAAA+AGG - chr4_2:11002724-11002743 None:intergenic 20.0%
!!! TTTTATGTGTATGTTTATGA+AGG + chr4_2:11002723-11002742 Msa0588610:intron 20.0%
!! AAAGATAATGCAAGAAAATA+AGG + chr4_2:11003073-11003092 Msa0588610:intron 20.0%
!! ACATAAACAACAAAACTTAT+TGG + chr4_2:11003886-11003905 Msa0588610:intron 20.0%
!! TTCTTCAAATAATATCAGTT+GGG - chr4_2:11003979-11003998 None:intergenic 20.0%
!! TTTCTTCAAATAATATCAGT+TGG - chr4_2:11003980-11003999 None:intergenic 20.0%
!! TTGGTACTTAATAATTTACA+TGG - chr4_2:11004137-11004156 None:intergenic 20.0%
!! TAAAAATGTTTACCTGATAA+TGG + chr4_2:11004243-11004262 Msa0588610:intron 20.0%
!! ATTTCTACCAAAAAAAAACT+CGG - chr4_2:11004554-11004573 None:intergenic 20.0%
!! AAATGAAGGATATATAAGAT+AGG + chr4_2:11004805-11004824 Msa0588610:intron 20.0%
!! ATTAACTACATAATAAGTAG+GGG - chr4_2:11004983-11005002 None:intergenic 20.0%
!! GAATTAACTACATAATAAGT+AGG - chr4_2:11004985-11005004 None:intergenic 20.0%
!! TAGTGTTAGAATAAAACATA+AGG - chr4_2:11005033-11005052 None:intergenic 20.0%
!! AACTAAGAAATACAAAAAAG+AGG - chr4_2:11005060-11005079 None:intergenic 20.0%
!! GAAAAATAGATATATTACGA+AGG - chr4_2:11005128-11005147 None:intergenic 20.0%
!! AAAATTATGATATATACCTC+TGG - chr4_2:11005319-11005338 None:intergenic 20.0%
!! AAGTATATAGTTGTCTAATT+CGG + chr4_2:11005438-11005457 Msa0588610:intron 20.0%
!!! TATTTGTTCTAAATGTAAAG+TGG + chr4_2:11006187-11006206 Msa0588610:intron 20.0%
!! TGTTCTTTCATAAAATATGT+TGG - chr4_2:11006580-11006599 None:intergenic 20.0%
!!! ATGAGTTATAGAAACATTTT+TGG + chr4_2:11007197-11007216 Msa0588610:three_prime_UTR 20.0%
!! TAACATTTAAGCTAATACAA+TGG - chr4_2:11007267-11007286 None:intergenic 20.0%
! TGAAGTGTAAAATTTGATGA+TGG - chr4_2:11000527-11000546 None:intergenic 25.0%
! TTACAACATCATCAATAACA+AGG + chr4_2:11000614-11000633 Msa0588610:five_prime_UTR 25.0%
!! CATTGTTATTCCATAAAATG+GGG - chr4_2:11000772-11000791 None:intergenic 25.0%
!! CACATTGTTATTCCATAAAA+TGG - chr4_2:11000774-11000793 None:intergenic 25.0%
!! CATTTTATGGAATAACAATG+TGG + chr4_2:11000772-11000791 Msa0588610:intron 25.0%
!!! TTTTTGGAAAATGAAGTTGT+GGG + chr4_2:11000811-11000830 Msa0588610:intron 25.0%
!!! CTTTGATTTTGTTGTTGTTA+TGG + chr4_2:11000862-11000881 Msa0588610:intron 25.0%
!!! CTTTGTTGACATTTTTTTTG+TGG + chr4_2:11001253-11001272 Msa0588610:intron 25.0%
!!! TTGTTGACATTTTTTTTGTG+GGG + chr4_2:11001255-11001274 Msa0588610:intron 25.0%
! ACTAATTAAAAAGAACACTC+AGG + chr4_2:11001286-11001305 Msa0588610:intron 25.0%
! CAAAATTATACAAAGAAGCT+TGG + chr4_2:11001404-11001423 Msa0588610:intron 25.0%
! TATCTATAACTATTCATCCT+GGG - chr4_2:11001885-11001904 None:intergenic 25.0%
! ATATCTATAACTATTCATCC+TGG - chr4_2:11001886-11001905 None:intergenic 25.0%
! AACTATCGAAATCAATGAAA+GGG - chr4_2:11002043-11002062 None:intergenic 25.0%
! AAACTATCGAAATCAATGAA+AGG - chr4_2:11002044-11002063 None:intergenic 25.0%
!!! TTTATTTTTCCTAATTGGTG+TGG + chr4_2:11002270-11002289 Msa0588610:intron 25.0%
! ATATAAGAATGAGGAAATAG+AGG - chr4_2:11002453-11002472 None:intergenic 25.0%
! TCTATTTCCTCATTCTTATA+TGG + chr4_2:11002452-11002471 Msa0588610:CDS 25.0%
! CTTGTAGTAAGTATATGTTT+AGG + chr4_2:11002747-11002766 Msa0588610:CDS 25.0%
! AAATGACAGTTAAAAAGGAA+CGG - chr4_2:11003750-11003769 None:intergenic 25.0%
! GCTCTGCAATAAATAATTAA+GGG - chr4_2:11003853-11003872 None:intergenic 25.0%
! TGTTTATGTGTATCTATTTC+TGG - chr4_2:11003875-11003894 None:intergenic 25.0%
!!! TATGTGTAAATTTTTTGCTC+AGG + chr4_2:11004009-11004028 Msa0588610:intron 25.0%
! TATTAAGTACCAACTATTGT+TGG + chr4_2:11004144-11004163 Msa0588610:intron 25.0%
!!! GCATTTGATTTTGTCTATTT+TGG + chr4_2:11004177-11004196 Msa0588610:intron 25.0%
! AATATCTATAAGCCATTATC+AGG - chr4_2:11004258-11004277 None:intergenic 25.0%
!!! TATTGAAAAGCTTTATTGCT+AGG + chr4_2:11004442-11004461 Msa0588610:intron 25.0%
!!! TTTTTGGTAGAAATACTGTT+AGG + chr4_2:11004560-11004579 Msa0588610:intron 25.0%
! TCAAATTTGTAACCATTAAG+TGG - chr4_2:11004936-11004955 None:intergenic 25.0%
! TTAACTACATAATAAGTAGG+GGG - chr4_2:11004982-11005001 None:intergenic 25.0%
! CATTAGTAAATGAACAGTTA+GGG - chr4_2:11005007-11005026 None:intergenic 25.0%
! ACATTAGTAAATGAACAGTT+AGG - chr4_2:11005008-11005027 None:intergenic 25.0%
!!! TTAACGGATTTAATCATTGT+GGG - chr4_2:11005088-11005107 None:intergenic 25.0%
!!! TTTAACGGATTTAATCATTG+TGG - chr4_2:11005089-11005108 None:intergenic 25.0%
! AGTATATAGTTGTCTAATTC+GGG + chr4_2:11005439-11005458 Msa0588610:intron 25.0%
! TGTAGGAATATGCAATTTAT+TGG + chr4_2:11005611-11005630 Msa0588610:CDS 25.0%
! GTAGGAATATGCAATTTATT+GGG + chr4_2:11005612-11005631 Msa0588610:CDS 25.0%
!!! TAACTCTTTGTGTTTTTTCT+AGG + chr4_2:11005650-11005669 Msa0588610:intron 25.0%
! TATTATTTAGGCAGTAACAA+TGG + chr4_2:11005958-11005977 Msa0588610:intron 25.0%
! ATTATTTAGGCAGTAACAAT+GGG + chr4_2:11005959-11005978 Msa0588610:intron 25.0%
!!! TTATCAATGTCATTTTCATC+TGG + chr4_2:11006899-11006918 Msa0588610:intron 25.0%
!!! CGCTAACATTTTTTTTTTAC+AGG + chr4_2:11006929-11006948 Msa0588610:intron 25.0%
!! CAACTCTTGTATAGTATTTT+TGG + chr4_2:11007008-11007027 Msa0588610:CDS 25.0%
! TCTATAACTCATTCAACAAA+TGG - chr4_2:11007189-11007208 None:intergenic 25.0%
!!! TATAGAAACATTTTTGGTGA+AGG + chr4_2:11007203-11007222 Msa0588610:three_prime_UTR 25.0%
AGTTGTATGTTACACAATCT+TGG - chr4_2:11000474-11000493 None:intergenic 30.0%
TTATGGAATAACAATGTGGA+TGG + chr4_2:11000776-11000795 Msa0588610:intron 30.0%
!! CTTTTTGGAAAATGAAGTTG+TGG + chr4_2:11000810-11000829 Msa0588610:intron 30.0%
GATAGTAAAGATGAAAATCC+AGG + chr4_2:11000994-11001013 Msa0588610:CDS 30.0%
CAATGTACTATAGAAGTTGA+TGG + chr4_2:11001082-11001101 Msa0588610:intron 30.0%
TTACAAGGGTTATATTGCAT+TGG + chr4_2:11001154-11001173 Msa0588610:intron 30.0%
!! AGGTTGAGTTAATGGATTTA+AGG + chr4_2:11001506-11001525 Msa0588610:intron 30.0%
!! CCTTATAAAATCGGTTTGTA+AGG - chr4_2:11001732-11001751 None:intergenic 30.0%
!! CCTTACAAACCGATTTTATA+AGG + chr4_2:11001729-11001748 Msa0588610:intron 30.0%
CTAACTGATCCTTACAAAAT+TGG - chr4_2:11001954-11001973 None:intergenic 30.0%
! CAATTTTGTAAGGATCAGTT+AGG + chr4_2:11001952-11001971 Msa0588610:intron 30.0%
! AAATCAATGAAAGGGAGTTT+TGG - chr4_2:11002035-11002054 None:intergenic 30.0%
GTAGTATACCTTAGAAAACA+TGG + chr4_2:11002150-11002169 Msa0588610:intron 30.0%
ATTTGACAGAAGTTCATTGT+TGG - chr4_2:11002224-11002243 None:intergenic 30.0%
TCATTATTTCCACACCAATT+AGG - chr4_2:11002282-11002301 None:intergenic 30.0%
! TTTTCTTTCAAAAGTCCCTT+TGG + chr4_2:11002313-11002332 Msa0588610:intron 30.0%
TTTCTTTCAAAAGTCCCTTT+GGG + chr4_2:11002314-11002333 Msa0588610:intron 30.0%
TTCTTATATGGCTACCATAT+TGG + chr4_2:11002464-11002483 Msa0588610:CDS 30.0%
TCTTATATGGCTACCATATT+GGG + chr4_2:11002465-11002484 Msa0588610:CDS 30.0%
ATCTATAGAAATGCTCTCTA+AGG - chr4_2:11002595-11002614 None:intergenic 30.0%
AACATACACATAAAAGGAAG+TGG - chr4_2:11002718-11002737 None:intergenic 30.0%
GTAGTAAGTATATGTTTAGG+AGG + chr4_2:11002750-11002769 Msa0588610:CDS 30.0%
TTTATTGGATCTTCTTTCAG+TGG + chr4_2:11002777-11002796 Msa0588610:CDS 30.0%
TTATTGGATCTTCTTTCAGT+GGG + chr4_2:11002778-11002797 Msa0588610:CDS 30.0%
GCTTTAACAGTCTTGATAAA+AGG + chr4_2:11002995-11003014 Msa0588610:intron 30.0%
TGCAAGAAAATAAGGAAAAG+AGG + chr4_2:11003081-11003100 Msa0588610:intron 30.0%
TGCAACATCAAAATCTCTTT+GGG + chr4_2:11003189-11003208 Msa0588610:CDS 30.0%
! TTATTTGTTGGTACTGGAAT+GGG + chr4_2:11003229-11003248 Msa0588610:CDS 30.0%
!!! GTTTTTTTTTCTGCAGTATG+AGG + chr4_2:11003457-11003476 Msa0588610:intron 30.0%
TAATAATTGTTAGCTCCACT+TGG + chr4_2:11003512-11003531 Msa0588610:intron 30.0%
! ATACCAACCAACTATTTCTT+TGG - chr4_2:11003640-11003659 None:intergenic 30.0%
! AAAGAAATAGTTGGTTGGTA+TGG + chr4_2:11003639-11003658 Msa0588610:intron 30.0%
GGCTCTGCAATAAATAATTA+AGG - chr4_2:11003854-11003873 None:intergenic 30.0%
TAATACTTAAAAAGGAACGG+AGG + chr4_2:11003941-11003960 Msa0588610:intron 30.0%
TAGACAAAATCAAATGCACT+AGG - chr4_2:11004174-11004193 None:intergenic 30.0%
!! TTTGTCTATTTTGGACTCTT+TGG + chr4_2:11004186-11004205 Msa0588610:intron 30.0%
TAAACTAAAAAGATCGGCAA+TGG + chr4_2:11004310-11004329 Msa0588610:intron 30.0%
CTAACAGTATCAATCATAAC+GGG - chr4_2:11004528-11004547 None:intergenic 30.0%
CCTAACAGTATCAATCATAA+CGG - chr4_2:11004529-11004548 None:intergenic 30.0%
!!! TTAGGAACCGAGTTTTTTTT+TGG + chr4_2:11004544-11004563 Msa0588610:intron 30.0%
! CTTGTCCAATTATTTTCACT+CGG - chr4_2:11004588-11004607 None:intergenic 30.0%
TAGCTCATTTCTATCTTATG+TGG - chr4_2:11004786-11004805 None:intergenic 30.0%
GATAGAAATGAGCTAAATGA+AGG + chr4_2:11004791-11004810 Msa0588610:intron 30.0%
! AGCAAGTTGGACAAATTATA+AGG + chr4_2:11004843-11004862 Msa0588610:intron 30.0%
TTATAAGGAATCCAGAGAAA+AGG + chr4_2:11004858-11004877 Msa0588610:intron 30.0%
TAACTACATAATAAGTAGGG+GGG - chr4_2:11004981-11005000 None:intergenic 30.0%
AAGCTCTCAGAAATATTGTT+TGG + chr4_2:11005285-11005304 Msa0588610:CDS 30.0%
ATAGAAAACAGCATTTATGC+CGG - chr4_2:11005535-11005554 None:intergenic 30.0%
! TTTGGTGTATCATCAAAGAT+AGG + chr4_2:11005579-11005598 Msa0588610:CDS 30.0%
! AGTTATTTCGATGATTCTGA+TGG + chr4_2:11005732-11005751 Msa0588610:CDS 30.0%
! ATGATTCTGATGGATAAACT+TGG + chr4_2:11005742-11005761 Msa0588610:CDS 30.0%
AGAAAACTTCAACTTGCATT+TGG + chr4_2:11006067-11006086 Msa0588610:intron 30.0%
ACCTTGCTTATGAATTTGAA+AGG + chr4_2:11006092-11006111 Msa0588610:intron 30.0%
!! TTATTTGGTAGTGCAAAAGA+AGG - chr4_2:11006126-11006145 None:intergenic 30.0%
TAGAGATCTTCGAAGTTATT+TGG - chr4_2:11006141-11006160 None:intergenic 30.0%
AAATTGCAGTTCATACTTTG+CGG - chr4_2:11006766-11006785 None:intergenic 30.0%
! TTTTGTGAAGAAATATGTCC+TGG + chr4_2:11007055-11007074 Msa0588610:CDS 30.0%
AAATATGTCCTGGAAACAAA+AGG + chr4_2:11007065-11007084 Msa0588610:CDS 30.0%
AATATGTCCTGGAAACAAAA+GGG + chr4_2:11007066-11007085 Msa0588610:CDS 30.0%
GGCAAAATTTCATGTTAAAG+AGG - chr4_2:11007246-11007265 None:intergenic 30.0%
TAGACAAATTAAAGGGATGA+GGG + chr4_2:11007376-11007395 Msa0588610:three_prime_UTR 30.0%
TTGCGTAAGAACGAAATCTA+TGG + chr4_2:11000428-11000447 Msa0588610:five_prime_UTR 35.0%
! TTTATGTGCACCCCATTTTA+TGG + chr4_2:11000759-11000778 Msa0588610:intron 35.0%
!!! TTTTGTTGTTGTTATGGTGC+AGG + chr4_2:11000868-11000887 Msa0588610:intron 35.0%
ACTGTTGTGAGGTTTGTATA+AGG + chr4_2:11000907-11000926 Msa0588610:five_prime_UTR 35.0%
GAATAAATCCCAAAACAGCA+AGG - chr4_2:11001022-11001041 None:intergenic 35.0%
TGTGTGTGAGACTGAATATT+TGG + chr4_2:11001108-11001127 Msa0588610:intron 35.0%
GTGTGTGAGACTGAATATTT+GGG + chr4_2:11001109-11001128 Msa0588610:intron 35.0%
TGTGTGAGACTGAATATTTG+GGG + chr4_2:11001110-11001129 Msa0588610:intron 35.0%
CTGAATATTTGGGGAAGAAA+TGG + chr4_2:11001119-11001138 Msa0588610:intron 35.0%
ATTTGGGGAAGAAATGGAAA+TGG + chr4_2:11001125-11001144 Msa0588610:intron 35.0%
!!! TGACATTTTTTTTGTGGGGT+AGG + chr4_2:11001259-11001278 Msa0588610:intron 35.0%
!!! GACATTTTTTTTGTGGGGTA+GGG + chr4_2:11001260-11001279 Msa0588610:intron 35.0%
!!! ACATTTTTTTTGTGGGGTAG+GGG + chr4_2:11001261-11001280 Msa0588610:intron 35.0%
TGGACGCTTGTATAGAATAA+AGG + chr4_2:11001688-11001707 Msa0588610:intron 35.0%
!! AAAATCGGTTTGTAAGGTGA+GGG - chr4_2:11001726-11001745 None:intergenic 35.0%
!! TAAAATCGGTTTGTAAGGTG+AGG - chr4_2:11001727-11001746 None:intergenic 35.0%
TGAGCTTGTAAAATTTGGCA+TGG + chr4_2:11002108-11002127 Msa0588610:intron 35.0%
! ATGACTGACCATGTTTTCTA+AGG - chr4_2:11002161-11002180 None:intergenic 35.0%
! GAAGTTCATTGTTGGTTACT+TGG - chr4_2:11002216-11002235 None:intergenic 35.0%
TTCTTTCAAAAGTCCCTTTG+GGG + chr4_2:11002315-11002334 Msa0588610:intron 35.0%
ACGCACTGAAGATATGAAAA+AGG - chr4_2:11002378-11002397 None:intergenic 35.0%
ATGGTAGCCATATAAGAATG+AGG - chr4_2:11002462-11002481 None:intergenic 35.0%
! GATGAAAGAGTTTGAAGCTT+TGG - chr4_2:11002505-11002524 None:intergenic 35.0%
!! GAGAGCATTTCTATAGATCT+CGG + chr4_2:11002597-11002616 Msa0588610:CDS 35.0%
!!! TGTTTAGGAGGTGCTTTTAT+TGG + chr4_2:11002762-11002781 Msa0588610:CDS 35.0%
ATTACTGCTCCAATGATCAT+AGG - chr4_2:11002855-11002874 None:intergenic 35.0%
TGAGCTGGATAACTCTTTAT+AGG + chr4_2:11002881-11002900 Msa0588610:intron 35.0%
! AACGTAGTGGAATAAGAAGA+TGG - chr4_2:11003039-11003058 None:intergenic 35.0%
CTTCTTATTCCACTACGTTT+CGG + chr4_2:11003040-11003059 Msa0588610:intron 35.0%
! TGTTTTATACCGAAACGTAG+TGG - chr4_2:11003052-11003071 None:intergenic 35.0%
ATAAGGAAAAGAGGTCAAAC+AGG + chr4_2:11003090-11003109 Msa0588610:intron 35.0%
GTGCAACATCAAAATCTCTT+TGG + chr4_2:11003188-11003207 Msa0588610:intron 35.0%
GCAACATCAAAATCTCTTTG+GGG + chr4_2:11003190-11003209 Msa0588610:CDS 35.0%
!! CTTTTGGGAAGGTTATTTGT+TGG + chr4_2:11003217-11003236 Msa0588610:CDS 35.0%
! GTTATTTGTTGGTACTGGAA+TGG + chr4_2:11003228-11003247 Msa0588610:CDS 35.0%
ATTATTACCAGTGTTGTGCT+TGG - chr4_2:11003349-11003368 None:intergenic 35.0%
CAACACTTCAGATTGAACAA+GGG - chr4_2:11003426-11003445 None:intergenic 35.0%
TTAGCTCCACTTGGATTAAT+AGG + chr4_2:11003521-11003540 Msa0588610:intron 35.0%
! AACCAACTATTTCTTTGGCT+GGG - chr4_2:11003635-11003654 None:intergenic 35.0%
GTTGGTATGGAATGTCAAAT+TGG + chr4_2:11003652-11003671 Msa0588610:intron 35.0%
!!! GTGTAAATTTTTTGCTCAGG+TGG + chr4_2:11004012-11004031 Msa0588610:intron 35.0%
!!! TAAATTTTTTGCTCAGGTGG+CGG + chr4_2:11004015-11004034 Msa0588610:intron 35.0%
CTAGGATAACCAACAATAGT+TGG - chr4_2:11004156-11004175 None:intergenic 35.0%
!! TATTTTGGACTCTTTGGTGT+AGG + chr4_2:11004192-11004211 Msa0588610:intron 35.0%
! GACTATATTTTCCTGATGTG+AGG + chr4_2:11004418-11004437 Msa0588610:intron 35.0%
CCGTTATGATTGATACTGTT+AGG + chr4_2:11004526-11004545 Msa0588610:intron 35.0%
AGGAACCGAGTGAAAATAAT+TGG + chr4_2:11004580-11004599 Msa0588610:intron 35.0%
GAGAAATGGTTGTACTAGAA+GGG - chr4_2:11004910-11004929 None:intergenic 35.0%
AGAGAAATGGTTGTACTAGA+AGG - chr4_2:11004911-11004930 None:intergenic 35.0%
CCATTAAGTGGATAGAGAAA+TGG - chr4_2:11004924-11004943 None:intergenic 35.0%
CCATTTCTCTATCCACTTAA+TGG + chr4_2:11004921-11004940 Msa0588610:intron 35.0%
TTCTGAGCAAAGCGAAAAAT+AGG - chr4_2:11005150-11005169 None:intergenic 35.0%
! ATTTTTCGCTTTGCTCAGAA+AGG + chr4_2:11005150-11005169 Msa0588610:intron 35.0%
TATGATATATACCTCTGGCA+TGG - chr4_2:11005314-11005333 None:intergenic 35.0%
TCACTGCAAAATGCATTTAG+TGG - chr4_2:11005473-11005492 None:intergenic 35.0%
! CATTTTGCAGTGATGTTCAT+TGG + chr4_2:11005480-11005499 Msa0588610:intron 35.0%
TGATACACCAAAGCTTTCAA+AGG - chr4_2:11005571-11005590 None:intergenic 35.0%
AAGATAGGAAACACATGTGT+AGG + chr4_2:11005594-11005613 Msa0588610:CDS 35.0%
! TTCTGATGGATAAACTTGGA+AGG + chr4_2:11005746-11005765 Msa0588610:CDS 35.0%
GCCTTTCAAATTCATAAGCA+AGG - chr4_2:11006096-11006115 None:intergenic 35.0%
! CTTATGAATTTGAAAGGCGT+TGG + chr4_2:11006098-11006117 Msa0588610:intron 35.0%
TAAAGTGGAATATGCAATGC+AGG + chr4_2:11006202-11006221 Msa0588610:intron 35.0%
GATCTTGCCAGGTAATATTT+CGG - chr4_2:11006280-11006299 None:intergenic 35.0%
! CTGTTGAGATCTTTGATAGT+GGG + chr4_2:11006377-11006396 Msa0588610:intron 35.0%
TAAAAGCTAATTCCACGGAA+GGG - chr4_2:11006520-11006539 None:intergenic 35.0%
TTAAAAGCTAATTCCACGGA+AGG - chr4_2:11006521-11006540 None:intergenic 35.0%
!!! TTCCGTGGAATTAGCTTTTA+AGG + chr4_2:11006520-11006539 Msa0588610:intron 35.0%
AGCCTTAAAAGCTAATTCCA+CGG - chr4_2:11006525-11006544 None:intergenic 35.0%
!!! GCTTTTAAGGCTGAGTTATA+TGG + chr4_2:11006533-11006552 Msa0588610:intron 35.0%
! CCACTTTCAATTTGAAGTGT+TGG - chr4_2:11006645-11006664 None:intergenic 35.0%
CCAACACTTCAAATTGAAAG+TGG + chr4_2:11006642-11006661 Msa0588610:intron 35.0%
TTCAAATTGAAAGTGGTGTC+TGG + chr4_2:11006649-11006668 Msa0588610:intron 35.0%
!!! GTTATTATTTTTGCGCATGC+TGG + chr4_2:11006971-11006990 Msa0588610:CDS 35.0%
ATAGCCTAAATGAGCTGAAT+AGG + chr4_2:11007131-11007150 Msa0588610:exon 35.0%
AGATCCTATTCAGCTCATTT+AGG - chr4_2:11007138-11007157 None:intergenic 35.0%
AATAGGATCTCATATGGATG+AGG + chr4_2:11007148-11007167 Msa0588610:three_prime_UTR 35.0%
ATCTCATATGGATGAGGTAT+AGG + chr4_2:11007154-11007173 Msa0588610:three_prime_UTR 35.0%
TCTCATATGGATGAGGTATA+GGG + chr4_2:11007155-11007174 Msa0588610:three_prime_UTR 35.0%
TGCAGGACTAGACAAATTAA+AGG + chr4_2:11007368-11007387 Msa0588610:three_prime_UTR 35.0%
GCAGGACTAGACAAATTAAA+GGG + chr4_2:11007369-11007388 Msa0588610:three_prime_UTR 35.0%
CTAGACAAATTAAAGGGATG+AGG + chr4_2:11007375-11007394 Msa0588610:three_prime_UTR 35.0%
GCAGTTGAAGAAGAAGAAGA+AGG - chr4_2:11000505-11000524 None:intergenic 40.0%
!! TGGTGCAGGAATTTGTTGAA+AGG + chr4_2:11000882-11000901 Msa0588610:intron 40.0%
GTTGAAAGGTAACTGTTGTG+AGG + chr4_2:11000896-11000915 Msa0588610:five_prime_UTR 40.0%
! TTTTATTGTTTCGCGATGCG+AGG + chr4_2:11000931-11000950 Msa0588610:exon 40.0%
!!! TGGAAATGGCTGCTTTTACA+AGG + chr4_2:11001139-11001158 Msa0588610:intron 40.0%
!!! GGAAATGGCTGCTTTTACAA+GGG + chr4_2:11001140-11001159 Msa0588610:intron 40.0%
!!! CATTTTTTTTGTGGGGTAGG+GGG + chr4_2:11001262-11001281 Msa0588610:intron 40.0%
AGGTGTTTGTCATCTGCTTA+TGG - chr4_2:11001451-11001470 None:intergenic 40.0%
ACCTAATTGAATCACAGTCG+AGG + chr4_2:11001467-11001486 Msa0588610:intron 40.0%
CCTAATTGAATCACAGTCGA+GGG + chr4_2:11001468-11001487 Msa0588610:intron 40.0%
CTAATTGAATCACAGTCGAG+GGG + chr4_2:11001469-11001488 Msa0588610:intron 40.0%
TAATTGAATCACAGTCGAGG+GGG + chr4_2:11001470-11001489 Msa0588610:intron 40.0%
GTAGCTCAAGGTTGAGTTAA+TGG + chr4_2:11001498-11001517 Msa0588610:intron 40.0%
CTTTAGCGCAGTAGAAAAAG+CGG + chr4_2:11001640-11001659 Msa0588610:intron 40.0%
ATTCTATACAAGCGTCCAGA+CGG - chr4_2:11001686-11001705 None:intergenic 40.0%
!! AAATCGGTTTGTAAGGTGAG+GGG - chr4_2:11001725-11001744 None:intergenic 40.0%
!! GTAAATGGTTGGTGATGGAT+AGG - chr4_2:11001794-11001813 None:intergenic 40.0%
!! TGGATGTAAATGGTTGGTGA+TGG - chr4_2:11001799-11001818 None:intergenic 40.0%
AACTATTCATCCTGGGACTT+GGG - chr4_2:11001878-11001897 None:intergenic 40.0%
TAACTATTCATCCTGGGACT+TGG - chr4_2:11001879-11001898 None:intergenic 40.0%
AAAATTGGCTGATCAGGTGA+GGG - chr4_2:11001939-11001958 None:intergenic 40.0%
CCTTACAAAATTGGCTGATC+AGG - chr4_2:11001945-11001964 None:intergenic 40.0%
! CCTGATCAGCCAATTTTGTA+AGG + chr4_2:11001942-11001961 Msa0588610:intron 40.0%
TTACAAACCAACTCCCCAAA+GGG - chr4_2:11002331-11002350 None:intergenic 40.0%
ATTACAAACCAACTCCCCAA+AGG - chr4_2:11002332-11002351 None:intergenic 40.0%
GAAGCGTATCATACCCAATA+TGG - chr4_2:11002481-11002500 None:intergenic 40.0%
! TCTATAGATCTCGGCTTTAG+TGG + chr4_2:11002606-11002625 Msa0588610:CDS 40.0%
! CTATAGATCTCGGCTTTAGT+GGG + chr4_2:11002607-11002626 Msa0588610:CDS 40.0%
! TATAGATCTCGGCTTTAGTG+GGG + chr4_2:11002608-11002627 Msa0588610:CDS 40.0%
TGTGCTTTGCCTATGATCAT+TGG + chr4_2:11002843-11002862 Msa0588610:CDS 40.0%
TGATCATTGGAGCAGTAATG+AGG + chr4_2:11002856-11002875 Msa0588610:CDS 40.0%
! GGAAGGTTATTTGTTGGTAC+TGG + chr4_2:11003223-11003242 Msa0588610:CDS 40.0%
TCTTTATGTGGCTGAGGTAT+AGG + chr4_2:11003273-11003292 Msa0588610:intron 40.0%
CTTCAGATTGAACAAGGGTT+CGG - chr4_2:11003421-11003440 None:intergenic 40.0%
CCAACACTTCAGATTGAACA+AGG - chr4_2:11003427-11003446 None:intergenic 40.0%
! CCTTGTTCAATCTGAAGTGT+TGG + chr4_2:11003424-11003443 Msa0588610:intron 40.0%
GTGAGACCTATTAATCCAAG+TGG - chr4_2:11003530-11003549 None:intergenic 40.0%
ACTCAGATTGCAACATGTCT+TGG + chr4_2:11003582-11003601 Msa0588610:CDS 40.0%
TGCAACATGTCTTGGAATCA+TGG + chr4_2:11003590-11003609 Msa0588610:CDS 40.0%
GCAACATGTCTTGGAATCAT+GGG + chr4_2:11003591-11003610 Msa0588610:CDS 40.0%
ATCATGGGTTCGCTCTTTAT+AGG + chr4_2:11003606-11003625 Msa0588610:CDS 40.0%
ATCCCAGCCAAAGAAATAGT+TGG + chr4_2:11003630-11003649 Msa0588610:CDS 40.0%
! CAACCAACTATTTCTTTGGC+TGG - chr4_2:11003636-11003655 None:intergenic 40.0%
CAGCCAAAGAAATAGTTGGT+TGG + chr4_2:11003634-11003653 Msa0588610:CDS 40.0%
GACAGTTAAAAAGGAACGGA+GGG - chr4_2:11003746-11003765 None:intergenic 40.0%
TGACAGTTAAAAAGGAACGG+AGG - chr4_2:11003747-11003766 None:intergenic 40.0%
TTGACCTTGAAAAGCCAATG+AGG - chr4_2:11004110-11004129 None:intergenic 40.0%
GTGTAGGCTAATTGATTGTG+TGG + chr4_2:11004208-11004227 Msa0588610:intron 40.0%
! CTTTTCAATAGCCTCACATC+AGG - chr4_2:11004432-11004451 None:intergenic 40.0%
! ACAGTATCAATCATAACGGG+AGG - chr4_2:11004525-11004544 None:intergenic 40.0%
GAGAGTAGACTCTCTTCTAA+GGG + chr4_2:11004662-11004681 Msa0588610:intron 40.0%
AAACTTGAATGCAAGGGGAA+AGG - chr4_2:11004751-11004770 None:intergenic 40.0%
CACTCAAACTTGAATGCAAG+GGG - chr4_2:11004756-11004775 None:intergenic 40.0%
CCACTCAAACTTGAATGCAA+GGG - chr4_2:11004757-11004776 None:intergenic 40.0%
ACCACTCAAACTTGAATGCA+AGG - chr4_2:11004758-11004777 None:intergenic 40.0%
! TGCATTCAAGTTTGAGTGGT+TGG + chr4_2:11004758-11004777 Msa0588610:intron 40.0%
CGGATTTAATCATTGTGGGA+GGG - chr4_2:11005084-11005103 None:intergenic 40.0%
ACGGATTTAATCATTGTGGG+AGG - chr4_2:11005085-11005104 None:intergenic 40.0%
AAATTCAGCCTCAGCTTCAA+TGG - chr4_2:11005181-11005200 None:intergenic 40.0%
TTTGTCAGTTCACTCATTGC+AGG - chr4_2:11005234-11005253 None:intergenic 40.0%
! TCAGCTACCTTTGAAAGCTT+TGG + chr4_2:11005561-11005580 Msa0588610:CDS 40.0%
AACACAAAGAGTTAAGCCAG+CGG - chr4_2:11005644-11005663 None:intergenic 40.0%
AGTTCTTATGCATCAGGATC+TGG + chr4_2:11006001-11006020 Msa0588610:CDS 40.0%
TATGTGCTATCATTCGCTCT+TGG + chr4_2:11006225-11006244 Msa0588610:CDS 40.0%
CAGGTAATATTTCGGACATG+AGG - chr4_2:11006272-11006291 None:intergenic 40.0%
CTCATGTCCGAAATATTACC+TGG + chr4_2:11006270-11006289 Msa0588610:CDS 40.0%
AATATGCTTGGCTGTGCATT+GGG + chr4_2:11006317-11006336 Msa0588610:CDS 40.0%
CCACTATCAAAGATCTCAAC+AGG - chr4_2:11006379-11006398 None:intergenic 40.0%
CCTGTTGAGATCTTTGATAG+TGG + chr4_2:11006376-11006395 Msa0588610:intron 40.0%
CTCACATTTATCGACACTCT+AGG + chr4_2:11006403-11006422 Msa0588610:intron 40.0%
TGTTTAGTCCTAGTCCTAAG+CGG + chr4_2:11006426-11006445 Msa0588610:intron 40.0%
! AGCCTTTACAAGGACTCTTT+TGG - chr4_2:11006488-11006507 None:intergenic 40.0%
AAAAGCTAATTCCACGGAAG+GGG - chr4_2:11006519-11006538 None:intergenic 40.0%
ACAGGTGATAAACTTCTTCG+TGG + chr4_2:11006947-11006966 Msa0588610:intron 40.0%
CAGGTGATAAACTTCTTCGT+GGG + chr4_2:11006948-11006967 Msa0588610:intron 40.0%
AGGTGATAAACTTCTTCGTG+GGG + chr4_2:11006949-11006968 Msa0588610:intron 40.0%
GAGCTGAATAGGATCTCATA+TGG + chr4_2:11007142-11007161 Msa0588610:three_prime_UTR 40.0%
!!! ATCCAGGTACCTTGCTGTTT+TGG + chr4_2:11001010-11001029 Msa0588610:intron 45.0%
!!! TCCAGGTACCTTGCTGTTTT+GGG + chr4_2:11001011-11001030 Msa0588610:intron 45.0%
CCCTCGACTGTGATTCAATT+AGG - chr4_2:11001471-11001490 None:intergenic 45.0%
AATTGAATCACAGTCGAGGG+GGG + chr4_2:11001471-11001490 Msa0588610:intron 45.0%
CAGTAGAAAAAGCGGACAGA+CGG + chr4_2:11001648-11001667 Msa0588610:intron 45.0%
AGTAGAAAAAGCGGACAGAC+GGG + chr4_2:11001649-11001668 Msa0588610:intron 45.0%
TTCTATACAAGCGTCCAGAC+GGG - chr4_2:11001685-11001704 None:intergenic 45.0%
GGTGAGTGGATGTAAATGGT+TGG - chr4_2:11001805-11001824 None:intergenic 45.0%
GTGTGGTGAGTGGATGTAAA+TGG - chr4_2:11001809-11001828 None:intergenic 45.0%
AAATTGGCTGATCAGGTGAG+GGG - chr4_2:11001938-11001957 None:intergenic 45.0%
CAAAATTGGCTGATCAGGTG+AGG - chr4_2:11001940-11001959 None:intergenic 45.0%
!! GGGAGTTTTGGTGCAACAAT+CGG - chr4_2:11002023-11002042 None:intergenic 45.0%
! TACAGAGTGCCAAACCTTGT+TGG + chr4_2:11002399-11002418 Msa0588610:CDS 45.0%
CTCTTTGCGGCATGTAATAG+TGG + chr4_2:11002427-11002446 Msa0588610:CDS 45.0%
TGACTACTCTGTGTTGCAGA+TGG - chr4_2:11002566-11002585 None:intergenic 45.0%
TTGGATCTTCTTTCAGTGGG+TGG + chr4_2:11002781-11002800 Msa0588610:CDS 45.0%
TCATAGGCAAAGCACACAAC+TGG - chr4_2:11002839-11002858 None:intergenic 45.0%
AGCAGTAATGAGGTATGAGC+TGG + chr4_2:11002866-11002885 Msa0588610:intron 45.0%
TCTGTGTCATGTGTCTGTAC+AGG + chr4_2:11002904-11002923 Msa0588610:intron 45.0%
GGAAAAGAGGTCAAACAGGA+AGG + chr4_2:11003094-11003113 Msa0588610:intron 45.0%
!!! ATCTCTTTGGGGCATGCTTT+TGG + chr4_2:11003201-11003220 Msa0588610:CDS 45.0%
!!! TCTCTTTGGGGCATGCTTTT+GGG + chr4_2:11003202-11003221 Msa0588610:CDS 45.0%
ACATAAAGAGCTGCAACAGG+CGG - chr4_2:11003262-11003281 None:intergenic 45.0%
!! GTTGTGCTTGGCATTGGTAT+CGG - chr4_2:11003337-11003356 None:intergenic 45.0%
!!! TCAGGTGGCGGATTTGTTTT+TGG + chr4_2:11004027-11004046 Msa0588610:intron 45.0%
!!! CAGGTGGCGGATTTGTTTTT+GGG + chr4_2:11004028-11004047 Msa0588610:intron 45.0%
! TGCTGCACTTGCTCTTTTCA+TGG + chr4_2:11004067-11004086 Msa0588610:CDS 45.0%
!!! GAGTCCTCATTGGCTTTTCA+AGG + chr4_2:11004103-11004122 Msa0588610:CDS 45.0%
GGAGAGTAGACTCTCTTCTA+AGG + chr4_2:11004661-11004680 Msa0588610:intron 45.0%
! CCCTTGCATTCAAGTTTGAG+TGG + chr4_2:11004754-11004773 Msa0588610:intron 45.0%
TAAGATAGGTCCCTGCCTTA+AGG + chr4_2:11004819-11004838 Msa0588610:intron 45.0%
!! TTGTCCAACTTGCTGCCTTA+AGG - chr4_2:11004837-11004856 None:intergenic 45.0%
! GAGTCTTCTCTCCTTTTCTC+TGG - chr4_2:11004872-11004891 None:intergenic 45.0%
GAGAGAAGACTCTCTTCCAA+GGG + chr4_2:11004880-11004899 Msa0588610:intron 45.0%
GTACTAGAAGGGAAAACCCT+TGG - chr4_2:11004899-11004918 None:intergenic 45.0%
! ATAATAAGTAGGGGGGTGCA+CGG - chr4_2:11004974-11004993 None:intergenic 45.0%
AGGAAGAACCATTGAAGCTG+AGG + chr4_2:11005170-11005189 Msa0588610:CDS 45.0%
GCTGAATTTGAGAAGCTCCT+GGG + chr4_2:11005192-11005211 Msa0588610:CDS 45.0%
GAACTGACAAAGTCTGACAG+AGG + chr4_2:11005243-11005262 Msa0588610:CDS 45.0%
! TTCTGAGAGCTTCATTGTGC+CGG - chr4_2:11005277-11005296 None:intergenic 45.0%
TTTGCTTTGCAGCAACTGTC+CGG + chr4_2:11005513-11005532 Msa0588610:CDS 45.0%
ATTTATTGGGTATCTGCCGC+TGG + chr4_2:11005625-11005644 Msa0588610:intron 45.0%
! CTTCTCCTCGGTAGCTTTTT+AGG + chr4_2:11005775-11005794 Msa0588610:CDS 45.0%
GCTGCAAGTTCTTATGCATC+AGG + chr4_2:11005995-11006014 Msa0588610:CDS 45.0%
GGAGCAATGTATCTATCCGT+CGG + chr4_2:11006022-11006041 Msa0588610:CDS 45.0%
ATTTCGGACATGAGGAGACA+AGG - chr4_2:11006264-11006283 None:intergenic 45.0%
CAAGCATATTGCCATTGCCT+TGG - chr4_2:11006307-11006326 None:intergenic 45.0%
CAAGGCAATGGCAATATGCT+TGG + chr4_2:11006305-11006324 Msa0588610:CDS 45.0%
CAATATGCTTGGCTGTGCAT+TGG + chr4_2:11006316-11006335 Msa0588610:CDS 45.0%
TCAAAACACCGCTTAGGACT+AGG - chr4_2:11006437-11006456 None:intergenic 45.0%
GGAATCTCAAAACACCGCTT+AGG - chr4_2:11006443-11006462 None:intergenic 45.0%
!! CATCTCTCGTGTTGATGATG+TGG - chr4_2:11006464-11006483 None:intergenic 45.0%
CACATCATCAACACGAGAGA+TGG + chr4_2:11006462-11006481 Msa0588610:intron 45.0%
GGCCAAAAGAGTCCTTGTAA+AGG + chr4_2:11006483-11006502 Msa0588610:intron 45.0%
CTATGTGTTAGTGTCGTGTC+TGG + chr4_2:11006720-11006739 Msa0588610:intron 45.0%
TGCAGTTCATACTTTGCGGT+CGG - chr4_2:11006762-11006781 None:intergenic 45.0%
TTTGCGCATGCTGGAACAAA+TGG + chr4_2:11006980-11006999 Msa0588610:CDS 45.0%
TTGCGCATGCTGGAACAAAT+GGG + chr4_2:11006981-11007000 Msa0588610:CDS 45.0%
!! GTGACTTCCCTTTTGTTTCC+AGG - chr4_2:11007076-11007095 None:intergenic 45.0%
AACAAAAGGGAAGTCACTGC+AGG + chr4_2:11007079-11007098 Msa0588610:CDS 45.0%
!!! TTTATTAATAGTAATTTTAA+CGG - chr4_2:11005104-11005123 None:intergenic 5.0%
AAGACAGCGAGTCGCATCAA+GGG + chr4_2:11000954-11000973 Msa0588610:CDS 50.0%
! TCCCAAAACAGCAAGGTACC+TGG - chr4_2:11001015-11001034 None:intergenic 50.0%
! CATCTGCTTATGGCGCTGAA+GGG - chr4_2:11001441-11001460 None:intergenic 50.0%
! TCATCTGCTTATGGCGCTGA+AGG - chr4_2:11001442-11001461 None:intergenic 50.0%
ACACCAAGCTCGGTAGTGTT+GGG + chr4_2:11001825-11001844 Msa0588610:intron 50.0%
TGGGAAAAAACCCAAGTCCC+AGG + chr4_2:11001865-11001884 Msa0588610:intron 50.0%
! CAAAAGTCCCTTTGGGGAGT+TGG + chr4_2:11002321-11002340 Msa0588610:intron 50.0%
! AGAGTGCCAAACCTTGTTGG+CGG + chr4_2:11002402-11002421 Msa0588610:CDS 50.0%
! CGGCTTTAGTGGGGATACAT+TGG + chr4_2:11002617-11002636 Msa0588610:CDS 50.0%
! AGTGGGGATACATTGGCTGA+AGG + chr4_2:11002624-11002643 Msa0588610:CDS 50.0%
TTCAGTGGGTGGATAGCAGA+TGG + chr4_2:11002792-11002811 Msa0588610:CDS 50.0%
TCAGTGGGTGGATAGCAGAT+GGG + chr4_2:11002793-11002812 Msa0588610:CDS 50.0%
!! TTTGGGGCATGCTTTTGGGA+AGG + chr4_2:11003206-11003225 Msa0588610:CDS 50.0%
! GTTGGTACTGGAATGGGACT+TGG + chr4_2:11003235-11003254 Msa0588610:CDS 50.0%
CATAAAGAGCTGCAACAGGC+GGG - chr4_2:11003261-11003280 None:intergenic 50.0%
GCCTGTTGCAGCTCTTTATG+TGG + chr4_2:11003261-11003280 Msa0588610:CDS 50.0%
GCCACATAAAGAGCTGCAAC+AGG - chr4_2:11003265-11003284 None:intergenic 50.0%
TGCAGCTCTTTATGTGGCTG+AGG + chr4_2:11003267-11003286 Msa0588610:CDS 50.0%
ACCAATGCCAAGCACAACAC+TGG + chr4_2:11003339-11003358 Msa0588610:intron 50.0%
ACCAGTGTTGTGCTTGGCAT+TGG - chr4_2:11003343-11003362 None:intergenic 50.0%
GTGTCTGACATCGACACATG+TGG - chr4_2:11003399-11003418 None:intergenic 50.0%
AAAGAGCAAGTGCAGCAGCA+GGG - chr4_2:11004064-11004083 None:intergenic 50.0%
AAAAGAGCAAGTGCAGCAGC+AGG - chr4_2:11004065-11004084 None:intergenic 50.0%
TCTGTGCAGAGAGTCCTCAT+TGG + chr4_2:11004093-11004112 Msa0588610:CDS 50.0%
!! CAACTTGCTGCCTTAAGGCA+GGG - chr4_2:11004832-11004851 None:intergenic 50.0%
GGAGAGAAGACTCTCTTCCA+AGG + chr4_2:11004879-11004898 Msa0588610:intron 50.0%
! TAATAAGTAGGGGGGTGCAC+GGG - chr4_2:11004973-11004992 None:intergenic 50.0%
GGCTGAATTTGAGAAGCTCC+TGG + chr4_2:11005191-11005210 Msa0588610:CDS 50.0%
GAATTTGAGAAGCTCCTGGG+AGG + chr4_2:11005195-11005214 Msa0588610:CDS 50.0%
GTTTCACATGTAGTCCTCCC+AGG - chr4_2:11005212-11005231 None:intergenic 50.0%
TCTGACAGAGGTGATGAGTC+CGG + chr4_2:11005255-11005274 Msa0588610:CDS 50.0%
! CTTGTTGTGCACGCAACTTC+AGG + chr4_2:11005706-11005725 Msa0588610:intron 50.0%
!! GGAAGGAAAGTGCTTCTCCT+CGG + chr4_2:11005763-11005782 Msa0588610:CDS 50.0%
CCATGCCTAAAAAGCTACCG+AGG - chr4_2:11005783-11005802 None:intergenic 50.0%
!! CCTCGGTAGCTTTTTAGGCA+TGG + chr4_2:11005780-11005799 Msa0588610:CDS 50.0%
GCAATGTATCTATCCGTCGG+TGG + chr4_2:11006025-11006044 Msa0588610:CDS 50.0%
TTACAGCAACATGCCACCGA+CGG - chr4_2:11006041-11006060 None:intergenic 50.0%
! CTATCATTCGCTCTTGGTGC+TGG + chr4_2:11006231-11006250 Msa0588610:CDS 50.0%
GACATGAGGAGACAAGGAAC+TGG - chr4_2:11006258-11006277 None:intergenic 50.0%
CAAGATCAGAGCCAAGGCAA+TGG + chr4_2:11006293-11006312 Msa0588610:CDS 50.0%
GGACTGCTTGAGCCTTTACA+AGG - chr4_2:11006498-11006517 None:intergenic 50.0%
GCAGTTCATACTTTGCGGTC+GGG - chr4_2:11006761-11006780 None:intergenic 50.0%
GAAGACAGCGAGTCGCATCA+AGG + chr4_2:11000953-11000972 Msa0588610:CDS 55.0%
AATCACAGTCGAGGGGGGAT+GGG + chr4_2:11001476-11001495 Msa0588610:intron 55.0%
AAAAAGCGGACAGACGGGCA+CGG + chr4_2:11001654-11001673 Msa0588610:intron 55.0%
TCCACTCACCACACCAAGCT+CGG + chr4_2:11001815-11001834 Msa0588610:intron 55.0%
! CAACACTACCGAGCTTGGTG+TGG - chr4_2:11001826-11001845 None:intergenic 55.0%
CACACCAAGCTCGGTAGTGT+TGG + chr4_2:11001824-11001843 Msa0588610:intron 55.0%
CACCAAGCTCGGTAGTGTTG+GGG + chr4_2:11001826-11001845 Msa0588610:intron 55.0%
! ACCAAGCTCGGTAGTGTTGG+GGG + chr4_2:11001827-11001846 Msa0588610:intron 55.0%
! TCGGTAGTGTTGGGGGATTG+AGG + chr4_2:11001834-11001853 Msa0588610:intron 55.0%
! CGGTAGTGTTGGGGGATTGA+GGG + chr4_2:11001835-11001854 Msa0588610:intron 55.0%
! GGTAGTGTTGGGGGATTGAG+GGG + chr4_2:11001836-11001855 Msa0588610:intron 55.0%
! GTAGTGTTGGGGGATTGAGG+GGG + chr4_2:11001837-11001856 Msa0588610:intron 55.0%
! GGGGATTGAGGGGGTGTATT+GGG + chr4_2:11001846-11001865 Msa0588610:intron 55.0%
CAGTGGGTGGATAGCAGATG+GGG + chr4_2:11002794-11002813 Msa0588610:CDS 55.0%
GGTGGATAGCAGATGGGGTT+GGG + chr4_2:11002799-11002818 Msa0588610:CDS 55.0%
CAGCTGTGCGGGGTACATAT+GGG + chr4_2:11003553-11003572 Msa0588610:CDS 55.0%
AGCTGTGCGGGGTACATATG+GGG + chr4_2:11003554-11003573 Msa0588610:CDS 55.0%
!! CCAACTTGCTGCCTTAAGGC+AGG - chr4_2:11004833-11004852 None:intergenic 55.0%
CCTGCCTTAAGGCAGCAAGT+TGG + chr4_2:11004830-11004849 Msa0588610:intron 55.0%
! AATAAGTAGGGGGGTGCACG+GGG - chr4_2:11004972-11004991 None:intergenic 55.0%
TTGTTTGGCTGCCATGCCAG+AGG + chr4_2:11005300-11005319 Msa0588610:CDS 55.0%
ACCTGGCAAGATCAGAGCCA+AGG + chr4_2:11006287-11006306 Msa0588610:CDS 55.0%
GAATCACAGTCGAGGGGGGA+TGG + chr4_2:11001475-11001494 Msa0588610:intron 60.0%
AAAAGCGGACAGACGGGCAC+GGG + chr4_2:11001655-11001674 Msa0588610:intron 60.0%
!! ACCGAGCTTGGTGTGGTGAG+TGG - chr4_2:11001819-11001838 None:intergenic 60.0%
TCCCCCAACACTACCGAGCT+TGG - chr4_2:11001831-11001850 None:intergenic 60.0%
! GGGGGATTGAGGGGGTGTAT+TGG + chr4_2:11001845-11001864 Msa0588610:intron 60.0%
!! AGAGCGCCGCCAACAAGGTT+TGG - chr4_2:11002411-11002430 None:intergenic 60.0%
CTTGTTGGCGGCGCTCTTTG+CGG + chr4_2:11002414-11002433 Msa0588610:CDS 60.0%
GGGTGGATAGCAGATGGGGT+TGG + chr4_2:11002798-11002817 Msa0588610:CDS 60.0%
AGGTCTCACCTCCAGCTGTG+CGG + chr4_2:11003541-11003560 Msa0588610:intron 60.0%
TATGTACCCCGCACAGCTGG+AGG - chr4_2:11003552-11003571 None:intergenic 60.0%
CCATATGTACCCCGCACAGC+TGG - chr4_2:11003555-11003574 None:intergenic 60.0%
CCAGCTGTGCGGGGTACATA+TGG + chr4_2:11003552-11003571 Msa0588610:CDS 60.0%
GCTGTGCGGGGTACATATGG+GGG + chr4_2:11003555-11003574 Msa0588610:CDS 60.0%
!! GCCTTGGCTCTGATCTTGCC+AGG - chr4_2:11006291-11006310 None:intergenic 60.0%
GAGGGGGGATGGGTAGCTCA+AGG + chr4_2:11001486-11001505 Msa0588610:intron 65.0%
!! CGCAAAGAGCGCCGCCAACA+AGG - chr4_2:11002416-11002435 None:intergenic 65.0%
GGTCTCACCTCCAGCTGTGC+GGG + chr4_2:11003542-11003561 Msa0588610:intron 65.0%
GTCTCACCTCCAGCTGTGCG+GGG + chr4_2:11003543-11003562 Msa0588610:CDS 65.0%
GCTCAAGCAGTCCCCTTCCG+TGG + chr4_2:11006505-11006524 Msa0588610:intron 65.0%
!!! CGGGCACGGGAGTGCCCGTC+TGG + chr4_2:11001668-11001687 Msa0588610:intron 80.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 11000340 11007439 11000340 ID=Msa0588610;Name=Msa0588610
chr4_2 mRNA 11000340 11007439 11000340 ID=Msa0588610-mRNA-1;Parent=Msa0588610;Name=Msa0588610-mRNA-1;_AED=0.17;_eAED=0.17;_QI=352|1|1|1|0.92|0.85|14|300|478
chr4_2 exon 11000340 11000635 11000340 ID=Msa0588610-mRNA-1:exon:3153;Parent=Msa0588610-mRNA-1
chr4_2 exon 11000890 11001015 11000890 ID=Msa0588610-mRNA-1:exon:3154;Parent=Msa0588610-mRNA-1
chr4_2 exon 11002393 11002486 11002393 ID=Msa0588610-mRNA-1:exon:3155;Parent=Msa0588610-mRNA-1
chr4_2 exon 11002578 11002645 11002578 ID=Msa0588610-mRNA-1:exon:3156;Parent=Msa0588610-mRNA-1
chr4_2 exon 11002745 11002877 11002745 ID=Msa0588610-mRNA-1:exon:3157;Parent=Msa0588610-mRNA-1
chr4_2 exon 11003189 11003288 11003189 ID=Msa0588610-mRNA-1:exon:3158;Parent=Msa0588610-mRNA-1
chr4_2 exon 11003543 11003655 11003543 ID=Msa0588610-mRNA-1:exon:3159;Parent=Msa0588610-mRNA-1
chr4_2 exon 11004031 11004124 11004031 ID=Msa0588610-mRNA-1:exon:3160;Parent=Msa0588610-mRNA-1
chr4_2 exon 11005168 11005321 11005168 ID=Msa0588610-mRNA-1:exon:3161;Parent=Msa0588610-mRNA-1
chr4_2 exon 11005490 11005633 11005490 ID=Msa0588610-mRNA-1:exon:3162;Parent=Msa0588610-mRNA-1
chr4_2 exon 11005728 11005801 11005728 ID=Msa0588610-mRNA-1:exon:3163;Parent=Msa0588610-mRNA-1
chr4_2 exon 11005968 11006056 11005968 ID=Msa0588610-mRNA-1:exon:3164;Parent=Msa0588610-mRNA-1
chr4_2 exon 11006224 11006338 11006224 ID=Msa0588610-mRNA-1:exon:3165;Parent=Msa0588610-mRNA-1
chr4_2 exon 11006951 11007439 11006951 ID=Msa0588610-mRNA-1:exon:3166;Parent=Msa0588610-mRNA-1
chr4_2 five_prime_UTR 11000340 11000635 11000340 ID=Msa0588610-mRNA-1:five_prime_utr;Parent=Msa0588610-mRNA-1
chr4_2 five_prime_UTR 11000890 11000945 11000890 ID=Msa0588610-mRNA-1:five_prime_utr;Parent=Msa0588610-mRNA-1
chr4_2 CDS 11000946 11001015 11000946 ID=Msa0588610-mRNA-1:cds;Parent=Msa0588610-mRNA-1
chr4_2 CDS 11002393 11002486 11002393 ID=Msa0588610-mRNA-1:cds;Parent=Msa0588610-mRNA-1
chr4_2 CDS 11002578 11002645 11002578 ID=Msa0588610-mRNA-1:cds;Parent=Msa0588610-mRNA-1
chr4_2 CDS 11002745 11002877 11002745 ID=Msa0588610-mRNA-1:cds;Parent=Msa0588610-mRNA-1
chr4_2 CDS 11003189 11003288 11003189 ID=Msa0588610-mRNA-1:cds;Parent=Msa0588610-mRNA-1
chr4_2 CDS 11003543 11003655 11003543 ID=Msa0588610-mRNA-1:cds;Parent=Msa0588610-mRNA-1
chr4_2 CDS 11004031 11004124 11004031 ID=Msa0588610-mRNA-1:cds;Parent=Msa0588610-mRNA-1
chr4_2 CDS 11005168 11005321 11005168 ID=Msa0588610-mRNA-1:cds;Parent=Msa0588610-mRNA-1
chr4_2 CDS 11005490 11005633 11005490 ID=Msa0588610-mRNA-1:cds;Parent=Msa0588610-mRNA-1
chr4_2 CDS 11005728 11005801 11005728 ID=Msa0588610-mRNA-1:cds;Parent=Msa0588610-mRNA-1
chr4_2 CDS 11005968 11006056 11005968 ID=Msa0588610-mRNA-1:cds;Parent=Msa0588610-mRNA-1
chr4_2 CDS 11006224 11006338 11006224 ID=Msa0588610-mRNA-1:cds;Parent=Msa0588610-mRNA-1
chr4_2 CDS 11006951 11007139 11006951 ID=Msa0588610-mRNA-1:cds;Parent=Msa0588610-mRNA-1
chr4_2 three_prime_UTR 11007140 11007439 11007140 ID=Msa0588610-mRNA-1:three_prime_utr;Parent=Msa0588610-mRNA-1
Gene Sequence

>Msa0588610

ATGCGAGGAAGACAGCGAGTCGCATCAAGGGAATACTTAATTGTGCATGATAGTAAAGATGAAAATCCAGTGCGTGTACAGAGTGCCAAACCTTGTTGGCGGCGCTCTTTGCGGCATGTAATAGTGGCCTCTATTTCCTCATTCTTATATGGCTACCATATTGGAGTAGTCAATGAAACCTTAGAGAGCATTTCTATAGATCTCGGCTTTAGTGGGGATACATTGGCTGAAGGTCTTGTAGTAAGTATATGTTTAGGAGGTGCTTTTATTGGATCTTCTTTCAGTGGGTGGATAGCAGATGGGGTTGGGCATAGAAGAAGTTTCCAGTTGTGTGCTTTGCCTATGATCATTGGAGCAGTAATGAGTGCAACATCAAAATCTCTTTGGGGCATGCTTTTGGGAAGGTTATTTGTTGGTACTGGAATGGGACTTGGCCCGCCTGTTGCAGCTCTTTATGTGGCTGAGGTCTCACCTCCAGCTGTGCGGGGTACATATGGGGGATTAACTCAGATTGCAACATGTCTTGGAATCATGGGTTCGCTCTTTATAGGAATCCCAGCCAAAGAAATAGTTGGTTGGTGGCGGATTTGTTTTTGGGTATCTGTCATCCCTGCTGCTGCACTTGCTCTTTTCATGGAGATCTGTGCAGAGAGTCCTCATTGGCTTTTCAAGAAAGGAAGAACCATTGAAGCTGAGGCTGAATTTGAGAAGCTCCTGGGAGGACTACATGTGAAACCTGCAATGAGTGAACTGACAAAGTCTGACAGAGGTGATGAGTCCGGCACAATGAAGCTCTCAGAAATATTGTTTGGCTGCCATGCCAGAGTGATGTTCATTGGATCTGCGCTTTTTGCTTTGCAGCAACTGTCCGGCATAAATGCTGTTTTCTATTTCTCTTCAGCTACCTTTGAAAGCTTTGGTGTATCATCAAAGATAGGAAACACATGTGTAGGAATATGCAATTTATTGGGTTCAGTTATTTCGATGATTCTGATGGATAAACTTGGAAGGAAAGTGCTTCTCCTCGGTAGCTTTTTAGGCATGGCAGTAACAATGGGTCTACAAGTCATTGCTGCAAGTTCTTATGCATCAGGATCTGGAGCAATGTATCTATCCGTCGGTGGCATGTTGCTGTATGTGCTATCATTCGCTCTTGGTGCTGGTCCAGTTCCTTGTCTCCTCATGTCCGAAATATTACCTGGCAAGATCAGAGCCAAGGCAATGGCAATATGCTTGGCTGTGCATTGGGTGATAAACTTCTTCGTGGGGTTATTATTTTTGCGCATGCTGGAACAAATGGGAGCACAACTCTTGTATAGTATTTTTGGTTCATTTTCTTTGTTAGCTGTGATTTTTGTGAAGAAATATGTCCTGGAAACAAAAGGGAAGTCACTGCAGGAAATTGAGATTGCACTTCTTGCACAAGAAATAGCCTAA
Protein sequence

>Msa0588610

MRGRQRVASREYLIVHDSKDENPVRVQSAKPCWRRSLRHVIVASISSFLYGYHIGVVNETLESISIDLGFSGDTLAEGLVVSICLGGAFIGSSFSGWIADGVGHRRSFQLCALPMIIGAVMSATSKSLWGMLLGRLFVGTGMGLGPPVAALYVAEVSPPAVRGTYGGLTQIATCLGIMGSLFIGIPAKEIVGWWRICFWVSVIPAAALALFMEICAESPHWLFKKGRTIEAEAEFEKLLGGLHVKPAMSELTKSDRGDESGTMKLSEILFGCHARVMFIGSALFALQQLSGINAVFYFSSATFESFGVSSKIGNTCVGICNLLGSVISMILMDKLGRKVLLLGSFLGMAVTMGLQVIAASSYASGSGAMYLSVGGMLLYVLSFALGAGPVPCLLMSEILPGKIRAKAMAICLAVHWVINFFVGLLFLRMLEQMGAQLLYSIFGSFSLLAVIFVKKYVLETKGKSLQEIEIALLAQEIA*