AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0554710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0554710 MtrunA17_Chr4g0004821 97.484 477 12 0 1 477 1 477 0.0 932
Msa0554710 MtrunA17_Chr6g0486021 67.573 478 149 1 5 476 13 490 0.0 641
Msa0554710 MtrunA17_Chr3g0119401 41.830 459 264 3 20 475 77 535 2.95e-116 352
Msa0554710 MtrunA17_Chr7g0250881 41.304 460 266 2 17 472 43 502 2.60e-115 348
Msa0554710 MtrunA17_Chr6g0457781 39.958 473 270 3 14 472 70 542 1.18e-110 338
Msa0554710 MtrunA17_Chr4g0032021 29.058 499 319 9 2 473 65 555 6.25e-52 184
Msa0554710 MtrunA17_Chr1g0155221 31.236 445 279 10 40 469 53 485 2.32e-51 181
Msa0554710 MtrunA17_Chr1g0213631 30.947 433 280 6 53 470 2 430 4.20e-51 180
Msa0554710 MtrunA17_Chr8g0373181 29.754 447 288 10 40 472 51 485 1.30e-50 179
Msa0554710 MtrunA17_Chr7g0214451 29.385 439 300 5 42 470 39 477 2.01e-49 176
Msa0554710 MtrunA17_Chr7g0273281 29.464 448 281 8 41 472 67 495 2.92e-48 173
Msa0554710 MtrunA17_Chr4g0066581 30.405 444 291 10 37 472 53 486 3.36e-46 167
Msa0554710 MtrunA17_Chr4g0039651 29.844 449 278 9 49 469 58 497 2.33e-45 165
Msa0554710 MtrunA17_Chr1g0213611 29.018 448 294 8 42 470 84 526 9.58e-45 164
Msa0554710 MtrunA17_Chr2g0286721 30.405 444 285 11 37 469 50 480 5.48e-44 161
Msa0554710 MtrunA17_Chr2g0282031 30.022 453 282 10 41 470 58 498 1.94e-43 160
Msa0554710 MtrunA17_Chr4g0021771 28.364 483 306 11 16 470 30 500 1.42e-42 158
Msa0554710 MtrunA17_Chr8g0390261 28.354 395 266 7 87 468 95 485 1.74e-41 155
Msa0554710 MtrunA17_Chr7g0259471 29.451 455 274 9 42 474 46 475 9.31e-41 152
Msa0554710 MtrunA17_Chr4g0036021 29.158 463 284 10 41 469 32 484 9.65e-41 153
Msa0554710 MtrunA17_Chr5g0432581 30.621 467 275 15 41 469 24 479 2.19e-40 151
Msa0554710 MtrunA17_Chr8g0373191 28.475 446 277 11 40 473 43 458 2.87e-40 150
Msa0554710 MtrunA17_Chr7g0259221 28.543 501 294 12 3 474 12 477 5.63e-39 147
Msa0554710 MtrunA17_Chr6g0486681 26.862 376 264 6 103 468 111 485 8.69e-39 147
Msa0554710 MtrunA17_Chr6g0486671 26.862 376 264 6 103 468 111 485 8.69e-39 147
Msa0554710 MtrunA17_Chr8g0390141 26.638 458 303 8 41 468 31 485 1.58e-38 147
Msa0554710 MtrunA17_Chr8g0390521 29.645 479 297 13 17 469 4 468 2.50e-38 145
Msa0554710 MtrunA17_Chr8g0373531 27.959 490 301 14 17 470 7 480 5.54e-38 145
Msa0554710 MtrunA17_Chr6g0485661 28.460 513 294 16 3 464 12 502 7.08e-38 145
Msa0554710 MtrunA17_Chr2g0303731 32.335 334 211 6 33 352 21 353 2.37e-37 144
Msa0554710 MtrunA17_Chr3g0144361 26.735 490 318 10 18 469 2 488 3.04e-37 143
Msa0554710 MtrunA17_Chr5g0394341 25.508 443 309 8 42 468 46 483 5.27e-37 142
Msa0554710 MtrunA17_Chr4g0034681 26.722 479 311 10 20 469 21 488 3.06e-35 137
Msa0554710 MtrunA17_Chr3g0115711 25.380 461 305 9 41 468 28 482 3.48e-35 137
Msa0554710 MtrunA17_Chr3g0115721 26.022 465 302 11 41 470 28 485 2.35e-34 135
Msa0554710 MtrunA17_Chr4g0065311 25.113 442 312 7 42 470 45 480 3.44e-34 134
Msa0554710 MtrunA17_Chr1g0205691 25.000 448 321 7 42 476 46 491 7.11e-34 134
Msa0554710 MtrunA17_Chr2g0290181 27.859 341 226 6 32 352 17 357 1.83e-31 127
Msa0554710 MtrunA17_Chr8g0376611 32.374 278 178 3 80 347 4 281 3.56e-31 125
Msa0554710 MtrunA17_Chr3g0115751 25.413 484 322 9 20 468 9 488 5.23e-31 125
Msa0554710 MtrunA17_Chr4g0065324 25.676 444 311 11 42 472 53 490 7.83e-31 124
Msa0554710 MtrunA17_Chr3g0115781 25.161 465 306 12 41 470 30 487 7.90e-31 124
Msa0554710 MtrunA17_Chr3g0078971 25.635 394 275 7 90 469 95 484 8.69e-31 124
Msa0554710 MtrunA17_Chr3g0115741 25.806 465 299 11 41 468 31 486 8.78e-31 124
Msa0554710 MtrunA17_Chr8g0376631 30.408 319 207 4 37 342 27 343 2.43e-30 124
Msa0554710 MtrunA17_Chr1g0205681 23.025 443 321 7 42 465 47 488 1.07e-29 121
Msa0554710 MtrunA17_Chr1g0205671 23.028 469 323 9 41 476 28 491 1.35e-28 118
Msa0554710 MtrunA17_Chr5g0403831 24.675 462 312 9 40 469 35 492 1.67e-28 118
Msa0554710 MtrunA17_Chr3g0078991 25.063 395 279 9 89 469 94 485 3.28e-28 117
Msa0554710 MtrunA17_Chr3g0128081 25.606 371 250 6 118 469 123 486 1.08e-27 115
Msa0554710 MtrunA17_Chr5g0420841 23.834 386 280 5 98 470 102 486 1.14e-27 115
Msa0554710 MtrunA17_Chr3g0078791 24.595 370 233 7 118 468 68 410 3.43e-27 113
Msa0554710 MtrunA17_Chr1g0164851 25.445 393 280 5 88 469 94 484 4.00e-27 114
Msa0554710 MtrunA17_Chr3g0128171 24.379 443 315 8 45 470 1 440 4.08e-27 113
Msa0554710 MtrunA17_Chr5g0445601 25.635 394 271 6 90 468 98 484 4.20e-27 114
Msa0554710 MtrunA17_Chr1g0164871 25.191 393 281 5 88 469 94 484 4.29e-27 114
Msa0554710 MtrunA17_Chr2g0303701 28.571 336 230 5 33 358 21 356 7.07e-27 114
Msa0554710 MtrunA17_Chr5g0417611 23.649 444 318 8 42 468 47 486 1.33e-26 112
Msa0554710 MtrunA17_Chr3g0121674 29.268 287 181 6 200 470 4 284 2.69e-26 108
Msa0554710 MtrunA17_Chr7g0257631 25.326 383 270 5 98 468 140 518 2.62e-25 108
Msa0554710 MtrunA17_Chr4g0048411 23.684 380 276 6 103 469 108 486 1.16e-24 107
Msa0554710 MtrunA17_Chr8g0376601 29.102 323 218 4 37 348 27 349 1.79e-24 106
Msa0554710 MtrunA17_Chr3g0085971 23.490 447 319 8 42 470 45 486 6.39e-24 104
Msa0554710 MtrunA17_Chr3g0115731 25.954 393 238 12 96 470 107 464 2.06e-23 102
Msa0554710 MtrunA17_Chr7g0273261 30.638 235 153 5 242 472 9 237 2.66e-23 99.0
Msa0554710 MtrunA17_Chr5g0437021 24.263 441 318 8 42 469 47 484 3.98e-23 102
Msa0554710 MtrunA17_Chr4g0048051 22.767 347 249 5 103 433 108 451 7.72e-23 101
Msa0554710 MtrunA17_Chr2g0290161 26.103 272 162 6 94 352 19 264 1.01e-21 97.8
Msa0554710 MtrunA17_Chr5g0404191 30.415 217 141 4 40 254 54 262 2.60e-19 88.6
Msa0554710 MtrunA17_Chr5g0434231 32.704 159 83 1 80 238 7 141 5.90e-18 80.9
Msa0554710 MtrunA17_Chr4g0065351 25.228 329 222 8 156 468 1 321 7.44e-18 85.1
Msa0554710 MtrunA17_Chr5g0407441 30.542 203 133 4 41 238 9 208 3.25e-17 84.7
Msa0554710 MtrunA17_Chr7g0273271 32.203 177 111 3 47 222 38 206 3.77e-17 80.1
Msa0554710 MtrunA17_Chr3g0146061 29.469 207 133 1 275 468 517 723 1.49e-16 82.8
Msa0554710 MtrunA17_Chr3g0146061 28.095 210 147 3 47 253 15 223 1.47e-14 76.3
Msa0554710 MtrunA17_Chr3g0144261 29.767 215 147 3 41 253 9 221 1.19e-15 79.7
Msa0554710 MtrunA17_Chr3g0144261 29.665 209 132 3 273 468 507 713 3.72e-15 78.2
Msa0554710 MtrunA17_Chr5g0419321 31.098 164 111 2 77 238 73 236 1.78e-15 79.3
Msa0554710 MtrunA17_Chr8g0370151 27.053 207 138 1 275 468 138 344 8.85e-14 72.8
Msa0554710 MtrunA17_Chr5g0404181 34.615 104 63 2 371 472 31 131 9.20e-13 65.5
Msa0554710 MtrunA17_Chr8g0370141 25.871 201 145 3 43 240 11 210 1.29e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0554710 AT1G79820.2 68.802 484 141 3 1 475 11 493 0.0 666
Msa0554710 AT1G79820.1 68.802 484 141 3 1 475 11 493 0.0 666
Msa0554710 AT1G67300.1 67.083 480 149 3 5 475 13 492 0.0 619
Msa0554710 AT1G67300.3 67.083 480 149 3 5 475 13 492 0.0 619
Msa0554710 AT1G67300.2 66.736 481 150 4 5 475 13 493 0.0 613
Msa0554710 AT1G79820.4 68.075 426 126 3 1 417 11 435 0.0 583
Msa0554710 AT1G79820.3 61.570 484 128 4 1 475 11 445 0.0 574
Msa0554710 AT1G67300.6 66.588 422 132 3 5 417 13 434 0.0 554
Msa0554710 AT1G67300.7 66.588 422 132 3 5 417 13 434 0.0 554
Msa0554710 AT1G67300.4 66.427 417 131 3 5 412 13 429 0.0 543
Msa0554710 AT1G67300.5 66.427 417 131 3 5 412 13 429 0.0 543
Msa0554710 AT1G79820.5 59.944 357 95 1 119 475 75 383 1.60e-143 416
Msa0554710 AT1G05030.1 43.656 465 258 3 16 476 57 521 1.02e-123 371
Msa0554710 AT1G05030.2 43.735 423 236 2 56 476 47 469 1.34e-111 338
Msa0554710 AT5G16150.2 40.830 458 270 1 16 472 85 542 2.03e-110 337
Msa0554710 AT5G16150.1 40.830 458 270 1 16 472 85 542 2.03e-110 337
Msa0554710 AT5G16150.3 40.830 458 270 1 16 472 85 542 2.03e-110 337
Msa0554710 AT1G54730.2 31.320 447 272 9 42 472 38 465 1.49e-52 184
Msa0554710 AT1G19450.1 32.071 449 269 11 40 469 53 484 6.14e-51 180
Msa0554710 AT1G75220.1 33.038 451 262 12 40 469 52 483 6.81e-51 180
Msa0554710 AT1G08930.1 29.363 487 308 13 3 477 33 495 1.26e-46 169
Msa0554710 AT1G08930.2 29.363 487 308 13 3 477 33 495 1.26e-46 169
Msa0554710 AT1G54730.5 30.455 440 264 11 42 472 38 444 2.20e-46 167
Msa0554710 AT5G59250.1 29.185 466 302 6 33 473 95 557 2.55e-46 169
Msa0554710 AT2G48020.2 30.591 474 295 12 8 469 7 458 2.25e-45 165
Msa0554710 AT2G48020.1 30.591 474 295 12 8 469 7 458 2.25e-45 165
Msa0554710 AT5G17010.1 29.652 489 299 10 9 469 28 499 2.86e-45 165
Msa0554710 AT5G17010.3 29.652 489 299 10 9 469 28 499 2.86e-45 165
Msa0554710 AT5G17010.4 29.652 489 299 10 9 469 28 499 2.86e-45 165
Msa0554710 AT1G54730.3 31.095 402 241 9 42 426 38 420 1.03e-44 162
Msa0554710 AT2G43330.1 29.864 442 298 6 40 469 35 476 1.28e-44 164
Msa0554710 AT3G05160.1 29.060 468 312 9 10 472 2 454 3.05e-43 159
Msa0554710 AT3G05160.3 30.534 393 261 6 85 472 20 405 1.04e-42 156
Msa0554710 AT3G05160.2 30.534 393 261 6 85 472 20 405 1.04e-42 156
Msa0554710 AT5G18840.1 29.536 474 299 12 10 469 23 475 2.11e-42 157
Msa0554710 AT3G05165.3 28.390 472 313 10 9 472 9 463 3.39e-42 156
Msa0554710 AT3G05165.2 28.390 472 313 10 9 472 9 463 3.39e-42 156
Msa0554710 AT3G05165.1 28.390 472 313 10 9 472 9 463 3.39e-42 156
Msa0554710 AT2G20780.1 28.690 481 302 12 17 470 32 498 1.85e-41 155
Msa0554710 AT1G54730.9 29.949 394 240 9 42 419 38 411 2.64e-40 150
Msa0554710 AT1G54730.7 29.949 394 240 9 42 419 38 411 2.64e-40 150
Msa0554710 AT3G03090.1 27.033 492 310 13 8 469 27 499 7.18e-40 150
Msa0554710 AT1G08900.1 29.977 437 283 8 47 473 36 459 7.62e-40 150
Msa0554710 AT1G08900.2 29.977 437 283 8 47 473 36 459 7.62e-40 150
Msa0554710 AT4G04760.1 28.698 453 297 10 30 469 25 464 1.24e-39 149
Msa0554710 AT5G27360.1 28.721 477 321 7 4 475 9 471 1.29e-39 149
Msa0554710 AT1G08900.5 30.730 397 254 7 87 473 32 417 1.67e-39 148
Msa0554710 AT3G18830.1 27.235 481 310 11 23 469 21 495 1.98e-39 150
Msa0554710 AT3G05155.1 29.176 449 263 10 46 469 37 455 2.00e-39 148
Msa0554710 AT1G08900.3 30.730 397 254 7 87 473 66 451 3.11e-39 148
Msa0554710 AT5G27360.3 28.721 477 321 7 4 475 57 519 4.42e-39 149
Msa0554710 AT1G54730.4 30.203 394 234 10 42 426 38 399 1.33e-38 145
Msa0554710 AT3G05150.2 27.253 455 291 8 41 476 40 473 7.32e-38 144
Msa0554710 AT3G05150.1 27.679 448 284 8 41 469 40 466 1.05e-37 144
Msa0554710 AT3G05150.3 27.679 448 284 8 41 469 40 466 1.05e-37 144
Msa0554710 AT1G08890.1 28.078 463 310 8 19 472 12 460 1.47e-37 143
Msa0554710 AT3G20460.1 26.802 444 286 10 47 472 64 486 2.54e-37 143
Msa0554710 AT3G05400.1 27.872 470 301 11 16 473 17 460 4.39e-37 142
Msa0554710 AT1G08920.1 28.074 488 310 10 1 472 3 465 1.02e-36 141
Msa0554710 AT4G04760.3 28.250 400 265 8 82 469 16 405 1.11e-36 140
Msa0554710 AT2G20780.2 29.064 406 253 9 88 470 47 440 1.99e-36 140
Msa0554710 AT4G36670.1 26.875 480 309 12 25 469 4 476 2.17e-36 140
Msa0554710 AT3G05165.6 28.070 456 302 11 9 455 9 447 3.68e-36 140
Msa0554710 AT5G26340.1 26.357 387 271 6 94 468 100 484 1.89e-35 138
Msa0554710 AT4G04750.1 28.097 452 282 9 42 472 42 471 2.35e-35 137
Msa0554710 AT4G04750.2 28.097 452 282 9 42 472 42 471 2.35e-35 137
Msa0554710 AT1G08920.2 27.879 495 309 11 1 472 3 472 2.95e-35 137
Msa0554710 AT4G04760.2 27.556 450 303 10 30 469 25 461 3.54e-35 137
Msa0554710 AT2G16130.1 27.347 490 311 11 18 469 4 486 4.15e-35 137
Msa0554710 AT4G04750.3 28.118 441 296 8 42 472 86 515 5.69e-35 137
Msa0554710 AT3G19940.1 24.289 457 316 7 41 468 30 485 1.14e-34 136
Msa0554710 AT5G27350.1 27.872 470 316 8 13 475 14 467 1.35e-34 135
Msa0554710 AT1G54730.8 28.941 387 232 11 42 419 38 390 3.09e-34 133
Msa0554710 AT1G54730.11 30.968 310 191 6 42 342 38 333 1.23e-33 130
Msa0554710 AT5G27360.2 30.685 365 242 5 116 475 9 367 1.58e-33 130
Msa0554710 AT5G27360.5 30.685 365 242 5 116 475 9 367 1.58e-33 130
Msa0554710 AT3G19930.1 25.888 394 279 4 88 469 92 484 1.71e-33 133
Msa0554710 AT3G19930.2 25.888 394 279 4 88 469 92 484 1.71e-33 133
Msa0554710 AT1G77210.2 26.509 381 259 7 103 468 111 485 3.79e-33 132
Msa0554710 AT1G77210.1 26.509 381 259 7 103 468 111 485 3.79e-33 132
Msa0554710 AT3G05165.4 27.338 417 279 9 9 417 9 409 4.83e-33 130
Msa0554710 AT3G05165.5 27.338 417 279 9 9 417 9 409 4.83e-33 130
Msa0554710 AT3G05400.2 27.234 470 284 13 16 473 17 440 6.04e-33 130
Msa0554710 AT1G30220.1 28.249 354 240 6 14 354 5 357 6.32e-33 132
Msa0554710 AT1G30220.1 36.000 100 64 0 370 469 454 553 2.53e-11 66.2
Msa0554710 AT2G16120.1 27.049 488 310 12 20 469 7 486 2.31e-32 129
Msa0554710 AT2G18480.1 26.490 453 292 10 50 469 36 480 2.78e-32 129
Msa0554710 AT2G35740.1 27.914 326 221 4 37 348 27 352 4.95e-32 129
Msa0554710 AT1G08920.3 27.964 447 282 9 1 431 3 425 2.19e-31 126
Msa0554710 AT1G08900.4 28.861 395 259 7 47 431 36 418 4.93e-31 124
Msa0554710 AT1G50310.1 24.242 396 283 7 85 468 96 486 5.61e-31 125
Msa0554710 AT2G48020.4 30.663 362 223 10 8 362 7 347 1.06e-30 122
Msa0554710 AT4G16480.2 29.586 338 216 7 32 348 17 353 1.89e-30 125
Msa0554710 AT4G16480.3 29.586 338 216 7 32 348 17 353 1.89e-30 125
Msa0554710 AT4G16480.1 29.586 338 216 7 32 348 17 353 1.89e-30 125
Msa0554710 AT2G48020.3 30.702 342 211 9 8 342 7 329 6.83e-30 120
Msa0554710 AT4G02050.2 25.130 386 271 6 98 470 106 486 5.82e-29 120
Msa0554710 AT4G02050.1 25.130 386 271 6 98 470 106 486 5.82e-29 120
Msa0554710 AT5G23270.1 23.974 463 312 9 41 468 29 486 9.71e-29 119
Msa0554710 AT4G21480.1 22.811 491 333 7 13 469 6 484 1.28e-28 119
Msa0554710 AT3G05155.2 30.351 313 178 6 46 342 37 325 2.65e-28 115
Msa0554710 AT1G54730.10 30.961 281 171 6 42 313 38 304 3.23e-28 114
Msa0554710 AT1G54730.6 30.961 281 171 6 42 313 38 304 3.23e-28 114
Msa0554710 AT1G11260.1 23.251 443 320 6 42 468 47 485 5.56e-28 117
Msa0554710 AT5G26250.1 23.195 457 322 7 40 469 26 480 6.83e-27 114
Msa0554710 AT1G07340.1 22.588 456 323 7 41 468 28 481 1.14e-26 113
Msa0554710 AT5G17010.2 26.216 473 276 13 9 469 25 436 2.58e-26 111
Msa0554710 AT5G27360.4 28.571 350 235 5 4 351 9 345 2.93e-26 111
Msa0554710 AT1G50310.2 24.545 330 236 6 151 468 15 343 8.34e-26 108
Msa0554710 AT5G61520.2 25.067 375 271 6 103 468 66 439 9.20e-26 110
Msa0554710 AT5G61520.1 25.067 375 271 6 103 468 114 487 1.54e-25 109
Msa0554710 AT1G34580.2 25.995 377 259 8 103 462 58 431 1.88e-24 106
Msa0554710 AT1G77210.3 25.826 333 226 7 151 468 10 336 2.52e-24 104
Msa0554710 AT1G34580.1 25.995 377 259 8 103 462 108 481 3.53e-24 105
Msa0554710 AT3G05960.1 22.368 456 327 6 40 469 25 479 9.11e-24 104
Msa0554710 AT3G51490.2 30.435 207 131 2 275 468 510 716 2.08e-17 85.9
Msa0554710 AT3G51490.2 29.268 205 137 4 41 240 9 210 5.31e-15 78.2
Msa0554710 AT1G20840.2 32.367 207 127 2 275 468 509 715 2.32e-17 85.5
Msa0554710 AT1G20840.2 29.148 223 138 6 41 253 9 221 4.78e-14 75.1
Msa0554710 AT1G20840.1 32.367 207 127 2 275 468 509 715 2.32e-17 85.5
Msa0554710 AT1G20840.1 29.148 223 138 6 41 253 9 221 4.78e-14 75.1
Msa0554710 AT3G51490.3 30.435 207 131 2 275 468 460 666 2.37e-17 85.5
Msa0554710 AT3G51490.3 31.447 159 101 4 87 240 5 160 2.27e-11 66.6
Msa0554710 AT4G35300.5 28.502 207 135 1 275 468 319 525 9.43e-16 80.1
Msa0554710 AT4G35300.9 28.502 207 135 1 275 468 506 712 9.69e-16 80.5
Msa0554710 AT4G35300.9 27.778 216 140 4 47 253 15 223 7.70e-15 77.8
Msa0554710 AT4G35300.2 28.502 207 135 1 275 468 506 712 9.69e-16 80.5
Msa0554710 AT4G35300.2 27.778 216 140 4 47 253 15 223 7.70e-15 77.8
Msa0554710 AT4G35300.3 28.502 207 135 1 275 468 506 712 9.69e-16 80.5
Msa0554710 AT4G35300.3 27.778 216 140 4 47 253 15 223 7.70e-15 77.8
Msa0554710 AT4G35300.4 28.502 207 135 1 275 468 516 722 9.95e-16 80.5
Msa0554710 AT4G35300.4 27.778 216 140 4 47 253 15 223 7.11e-15 77.8
Msa0554710 AT4G35300.8 28.502 207 135 1 275 468 516 722 9.95e-16 80.5
Msa0554710 AT4G35300.8 27.778 216 140 4 47 253 15 223 7.11e-15 77.8
Msa0554710 AT4G35300.6 28.502 207 135 1 275 468 516 722 9.95e-16 80.5
Msa0554710 AT4G35300.6 27.778 216 140 4 47 253 15 223 7.11e-15 77.8
Msa0554710 AT4G35300.11 28.502 207 135 1 275 468 516 722 9.95e-16 80.5
Msa0554710 AT4G35300.11 27.778 216 140 4 47 253 15 223 7.11e-15 77.8
Msa0554710 AT4G35300.1 28.502 207 135 1 275 468 516 722 9.95e-16 80.5
Msa0554710 AT4G35300.1 27.778 216 140 4 47 253 15 223 7.11e-15 77.8
Msa0554710 AT4G35300.10 28.502 207 135 1 275 468 516 722 9.95e-16 80.5
Msa0554710 AT4G35300.10 27.778 216 140 4 47 253 15 223 7.11e-15 77.8
Msa0554710 AT4G35300.7 28.502 207 135 1 275 468 516 722 9.95e-16 80.5
Msa0554710 AT4G35300.7 27.778 216 140 4 47 253 15 223 7.11e-15 77.8
Msa0554710 AT3G51490.1 29.268 205 137 4 41 240 9 210 5.81e-15 78.2
Msa0554710 AT3G51490.1 29.146 199 136 2 275 468 510 708 6.68e-15 77.8
Msa0554710 AT1G20860.1 22.763 514 320 20 23 469 2 505 3.74e-11 65.9
Msa0554710 AT1G20860.2 22.780 518 323 20 19 469 50 557 3.99e-11 65.9

Find 146 sgRNAs with CRISPR-Local

Find 463 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTATATGGCTACCATAT+TGG 0.196867 4_1:+52340675 Msa0554710:CDS
ATCTCTTTGGGGCATGCTTT+TGG 0.208633 4_1:+52341412 Msa0554710:CDS
TGTAGGAATATGCAATTTAT+TGG 0.226449 4_1:+52343822 Msa0554710:CDS
ATACCAACCAACTATTTCTT+TGG 0.235451 4_1:-52341846 None:intergenic
CCAGCTGTGCGGGGTACATA+TGG 0.255578 4_1:+52341761 Msa0554710:CDS
TCTATTTCCTCATTCTTATA+TGG 0.262817 4_1:+52340663 Msa0554710:CDS
TGCAGGACTAGACAAATTAA+AGG 0.306806 4_1:+52345581 Msa0554710:three_prime_UTR
TCTTATATGGCTACCATATT+GGG 0.308240 4_1:+52340676 Msa0554710:CDS
GTGCAACATCAAAATCTCTT+TGG 0.308324 4_1:+52341399 Msa0554710:intron
AGATCCTATTCAGCTCATTT+AGG 0.308655 4_1:-52345348 None:intergenic
TCAGCTACCTTTGAAAGCTT+TGG 0.312153 4_1:+52343772 Msa0554710:CDS
ATCATGGGTTCGCTCTTTAT+AGG 0.319768 4_1:+52341815 Msa0554710:CDS
TTGATTTAAAATATAATTGC+AGG 0.336091 4_1:+52345564 Msa0554710:three_prime_UTR
TGCAACATCAAAATCTCTTT+GGG 0.336248 4_1:+52341400 Msa0554710:CDS
GGAAGGTTATTTGTTGGTAC+TGG 0.361961 4_1:+52341434 Msa0554710:CDS
ATAGCCTAAATGAGCTGAAT+AGG 0.365997 4_1:+52345344 Msa0554710:exon
TGTGCTTTGCCTATGATCAT+TGG 0.370781 4_1:+52341054 Msa0554710:CDS
ATCTATAGAAATGCTCTCTA+AGG 0.371450 4_1:-52340803 None:intergenic
TTTGCGCATGCTGGAACAAA+TGG 0.376467 4_1:+52345193 Msa0554710:CDS
AAGCTCTCAGAAATATTGTT+TGG 0.379026 4_1:+52343496 Msa0554710:CDS
GATCTTGCCAGGTAATATTT+CGG 0.383696 4_1:-52344489 None:intergenic
CAGCTGTGCGGGGTACATAT+GGG 0.386118 4_1:+52341762 Msa0554710:CDS
ATCTCATATGGATGAGGTAT+AGG 0.387224 4_1:+52345367 Msa0554710:three_prime_UTR
TTATTTGTTGGTACTGGAAT+GGG 0.388906 4_1:+52341440 Msa0554710:CDS
TTTGTCAGTTCACTCATTGC+AGG 0.392399 4_1:-52343442 None:intergenic
AGAGCGCCGCCAACAAGGTT+TGG 0.392731 4_1:-52340619 None:intergenic
CAACCAACTATTTCTTTGGC+TGG 0.395720 4_1:-52341842 None:intergenic
GAAGCGTATCATACCCAATA+TGG 0.399405 4_1:-52340689 None:intergenic
AAATTCAGCCTCAGCTTCAA+TGG 0.400060 4_1:-52343389 None:intergenic
GTAGGAATATGCAATTTATT+GGG 0.400286 4_1:+52343823 Msa0554710:CDS
AGTTGTATGTTACACAATCT+TGG 0.401761 4_1:-52338678 None:intergenic
TGCAACATGTCTTGGAATCA+TGG 0.406095 4_1:+52341799 Msa0554710:CDS
GGTGGATAGCAGATGGGGTT+GGG 0.411862 4_1:+52341010 Msa0554710:CDS
CTCTTTGCGGCATGTAATAG+TGG 0.413355 4_1:+52340638 Msa0554710:CDS
TCTATAACTCATTCAACAAA+TGG 0.425580 4_1:-52345399 None:intergenic
AGTTCTTATGCATCAGGATC+TGG 0.426307 4_1:+52344213 Msa0554710:CDS
TTGCGTAAGAACGAAATCTA+TGG 0.432351 4_1:+52338636 Msa0554710:five_prime_UTR
TTCAGTGGGTGGATAGCAGA+TGG 0.433775 4_1:+52341003 Msa0554710:CDS
GGCAAAATTTCATGTTAAAG+AGG 0.435069 4_1:-52345456 None:intergenic
TTTGCTTTGCAGCAATTGTC+CGG 0.435360 4_1:+52343724 Msa0554710:CDS
GCTGCAAGTTCTTATGCATC+AGG 0.435425 4_1:+52344207 Msa0554710:CDS
GTTGGTACTGGAATGGGACT+TGG 0.437679 4_1:+52341446 Msa0554710:CDS
ACTCAGATTGCAACATGTCT+TGG 0.438236 4_1:+52341791 Msa0554710:CDS
GGTCTCACCTCCAGCTGTGC+GGG 0.440429 4_1:+52341751 Msa0554710:intron
TTTGGTGTATCATCAAAGAT+AGG 0.447088 4_1:+52343790 Msa0554710:CDS
TCTCATATGGATGAGGTATA+GGG 0.447417 4_1:+52345368 Msa0554710:three_prime_UTR
ATTACTGCTCCAATGATCAT+AGG 0.447800 4_1:-52341063 None:intergenic
CCATATGTACCCCGCACAGC+TGG 0.448406 4_1:-52341761 None:intergenic
TCTGTTGTGAGGTTTGTATA+AGG 0.448924 4_1:+52339118 Msa0554710:five_prime_UTR
GCCTTGGCTCTGATCTTGCC+AGG 0.450879 4_1:-52344500 None:intergenic
GGCTGAATTTGAGAAGCTCC+TGG 0.451160 4_1:+52343402 Msa0554710:CDS
TCATAGGCAAAGCACACAAC+TGG 0.451176 4_1:-52341047 None:intergenic
AAATATGTCCTGGAAACAAA+AGG 0.453912 4_1:+52345278 Msa0554710:CDS
AAAAGAGCAAGTGCAGCAGC+AGG 0.455605 4_1:-52342271 None:intergenic
GTTATTTGTTGGTACTGGAA+TGG 0.457514 4_1:+52341439 Msa0554710:CDS
CTTGTTGGCGGCGCTCTTTG+CGG 0.457616 4_1:+52340625 Msa0554710:CDS
AATATGCTTGGCTGTGCATT+GGG 0.458610 4_1:+52344529 Msa0554710:CDS
TTATTGGATCTTCTTTCAGT+GGG 0.459554 4_1:+52340989 Msa0554710:CDS
CTATCATTCGCTCTTGGTGC+TGG 0.463436 4_1:+52344443 Msa0554710:CDS
GCCTGTTGCAGCTCTTTATG+TGG 0.463448 4_1:+52341472 Msa0554710:CDS
CAAGCATATTGCCATTGCCT+TGG 0.466824 4_1:-52344516 None:intergenic
TTCTGAGAGCTTCATTGTGC+CGG 0.470849 4_1:-52343485 None:intergenic
ATTATTTAGGCAGTAACAAT+GGG 0.475993 4_1:+52344171 Msa0554710:intron
GCCACATAAAGAGCTGCAAC+AGG 0.476023 4_1:-52341473 None:intergenic
GAGAGCATTTCTATAGATCT+CGG 0.479132 4_1:+52340808 Msa0554710:CDS
CTATAGATCTCGGCTTTAGT+GGG 0.479517 4_1:+52340818 Msa0554710:CDS
TTGGATCTTCTTTCAGTGGG+TGG 0.481996 4_1:+52340992 Msa0554710:CDS
GACATGAGGAGACAAGGAAC+TGG 0.482431 4_1:-52344467 None:intergenic
CTTGTAGTAAGTATATGTTT+AGG 0.485985 4_1:+52340958 Msa0554710:CDS
CAAGGCAATGGCAATATGCT+TGG 0.487871 4_1:+52344517 Msa0554710:CDS
TCAGTGGGTGGATAGCAGAT+GGG 0.488350 4_1:+52341004 Msa0554710:CDS
TTTATTGGATCTTCTTTCAG+TGG 0.488684 4_1:+52340988 Msa0554710:CDS
GAGCTGAATAGGATCTCATA+TGG 0.488872 4_1:+52345355 Msa0554710:three_prime_UTR
AGTTATTTCGATGATTCTGA+TGG 0.489140 4_1:+52343944 Msa0554710:CDS
CTCATGTCCGAAATATTACC+TGG 0.493783 4_1:+52344482 Msa0554710:CDS
GATAGTAAAGATGAAAATCC+AGG 0.496030 4_1:+52339205 Msa0554710:CDS
CGCAAAGAGCGCCGCCAACA+AGG 0.501285 4_1:-52340624 None:intergenic
GCAGGACTAGACAAATTAAA+GGG 0.501976 4_1:+52345582 Msa0554710:three_prime_UTR
AGCTGTGCGGGGTACATATG+GGG 0.502643 4_1:+52341763 Msa0554710:CDS
TCTATAGATCTCGGCTTTAG+TGG 0.507105 4_1:+52340817 Msa0554710:CDS
TTGCGCATGCTGGAACAAAT+GGG 0.508331 4_1:+52345194 Msa0554710:CDS
CAGGTGATAAACTTCTTCGT+GGG 0.508596 4_1:+52345161 Msa0554710:intron
AACCAACTATTTCTTTGGCT+GGG 0.508633 4_1:-52341841 None:intergenic
CAATATGCTTGGCTGTGCAT+TGG 0.508935 4_1:+52344528 Msa0554710:CDS
TGCAGCTCTTTATGTGGCTG+AGG 0.513136 4_1:+52341478 Msa0554710:CDS
AAGATAGGAAACACATGTGT+AGG 0.514546 4_1:+52343805 Msa0554710:CDS
CGGCTTTAGTGGGGATACAT+TGG 0.518216 4_1:+52340828 Msa0554710:CDS
ATATAAGAATGAGGAAATAG+AGG 0.519258 4_1:-52340661 None:intergenic
ACAGGTGATAAACTTCTTCG+TGG 0.521424 4_1:+52345160 Msa0554710:intron
GGGTGGATAGCAGATGGGGT+TGG 0.522864 4_1:+52341009 Msa0554710:CDS
GCAACATGTCTTGGAATCAT+GGG 0.528820 4_1:+52341800 Msa0554710:CDS
CATAAAGAGCTGCAACAGGC+GGG 0.531039 4_1:-52341469 None:intergenic
TACAGAGTGCCAAACCTTGT+TGG 0.531861 4_1:+52340610 Msa0554710:CDS
CTAGACAAATTAAAGGGATG+AGG 0.535122 4_1:+52345588 Msa0554710:three_prime_UTR
TATTATTTAGGCAGTAACAA+TGG 0.536062 4_1:+52344170 Msa0554710:intron
CAGTGGGTGGATAGCAGATG+GGG 0.539241 4_1:+52341005 Msa0554710:CDS
TCTGACAGAGGTGATGAGTC+CGG 0.542164 4_1:+52343466 Msa0554710:CDS
TCTGTGCAGAGAGTCCTCAT+TGG 0.546021 4_1:+52342302 Msa0554710:CDS
ATGATTCTGATGGATAAACT+TGG 0.546268 4_1:+52343954 Msa0554710:CDS
TATGTGCTATCATTCGCTCT+TGG 0.550439 4_1:+52344437 Msa0554710:CDS
AATATGTCCTGGAAACAAAA+GGG 0.553941 4_1:+52345279 Msa0554710:CDS
TGGTGCAGGAATTTGTTGAA+AGG 0.554963 4_1:+52339092 Msa0554710:intron
ATCCCAGCCAAAGAAATAGT+TGG 0.564233 4_1:+52341839 Msa0554710:CDS
ACATAAAGAGCTGCAACAGG+CGG 0.567818 4_1:-52341470 None:intergenic
AACAAAAGGGAAGTCACTGC+AGG 0.569265 4_1:+52345292 Msa0554710:CDS
GTAGTAAGTATATGTTTAGG+AGG 0.569409 4_1:+52340961 Msa0554710:CDS
TAACATTTAAGCTAATACAA+TGG 0.572681 4_1:-52345477 None:intergenic
GTTTCACATGTAGTCCTCCC+AGG 0.576479 4_1:-52343420 None:intergenic
ATGGTAGCCATATAAGAATG+AGG 0.582320 4_1:-52340670 None:intergenic
AGAGTGCCAAACCTTGTTGG+CGG 0.585760 4_1:+52340613 Msa0554710:CDS
AAGACAGCGAGTCGCATCAA+GGG 0.588707 4_1:+52339165 Msa0554710:CDS
AATAGGATCTCATATGGATG+AGG 0.589640 4_1:+52345361 Msa0554710:three_prime_UTR
TAGACAAATTAAAGGGATGA+GGG 0.589850 4_1:+52345589 Msa0554710:three_prime_UTR
GCTGAATTTGAGAAGCTCCT+GGG 0.590081 4_1:+52343403 Msa0554710:CDS
TTGACCTTGAAAAGCCAATG+AGG 0.591069 4_1:-52342316 None:intergenic
TGATACACCAAAGCTTTCAA+AGG 0.591297 4_1:-52343779 None:intergenic
ATAGAAAACAGCATTTATGC+CGG 0.592130 4_1:-52343743 None:intergenic
GAAGACAGCGAGTCGCATCA+AGG 0.593518 4_1:+52339164 Msa0554710:CDS
AGGAAGAACCATTGAAGCTG+AGG 0.595656 4_1:+52343381 Msa0554710:CDS
TGAAGTGTAAAATTTGATGA+TGG 0.598972 4_1:-52338734 None:intergenic
GGAAGGAAAGTGCTTCTCCT+CGG 0.603741 4_1:+52343975 Msa0554710:CDS
TGATCATTGGAGCAGTAATG+AGG 0.609046 4_1:+52341067 Msa0554710:CDS
CAAGATCAGAGCCAAGGCAA+TGG 0.609101 4_1:+52344505 Msa0554710:CDS
GTCTCACCTCCAGCTGTGCG+GGG 0.609230 4_1:+52341752 Msa0554710:CDS
CAGCCAAAGAAATAGTTGGT+TGG 0.609989 4_1:+52341843 Msa0554710:CDS
ACCTGGCAAGATCAGAGCCA+AGG 0.610725 4_1:+52344499 Msa0554710:CDS
TTCTGATGGATAAACTTGGA+AGG 0.614483 4_1:+52343958 Msa0554710:CDS
GCTGTGCGGGGTACATATGG+GGG 0.618608 4_1:+52341764 Msa0554710:CDS
AGGTCTCACCTCCAGCTGTG+CGG 0.619413 4_1:+52341750 Msa0554710:intron
CAGGTAATATTTCGGACATG+AGG 0.619698 4_1:-52344481 None:intergenic
AGTGGGGATACATTGGCTGA+AGG 0.623427 4_1:+52340835 Msa0554710:CDS
TATGTACCCCGCACAGCTGG+AGG 0.625032 4_1:-52341758 None:intergenic
TATAGATCTCGGCTTTAGTG+GGG 0.626366 4_1:+52340819 Msa0554710:CDS
TATGATATATACCTCTGGCA+TGG 0.626896 4_1:-52343522 None:intergenic
TTGTTTGGCTGCCATGCCAG+AGG 0.628196 4_1:+52343511 Msa0554710:CDS
TTGAAAGGTAATCTGTTGTG+AGG 0.634251 4_1:+52339107 Msa0554710:five_prime_UTR
ATTTCGGACATGAGGAGACA+AGG 0.640701 4_1:-52344473 None:intergenic
GGAGCAATGTATCTATCCGT+CGG 0.642647 4_1:+52344234 Msa0554710:CDS
AGGTGATAAACTTCTTCGTG+GGG 0.650610 4_1:+52345162 Msa0554710:intron
TTACAGCAACATGCCACCGA+CGG 0.651122 4_1:-52344250 None:intergenic
AAAGAGCAAGTGCAGCAGCA+GGG 0.652349 4_1:-52342270 None:intergenic
TTACAACATCATCAATAACA+AGG 0.664774 4_1:+52338824 Msa0554710:five_prime_UTR
GCAACATCAAAATCTCTTTG+GGG 0.686129 4_1:+52341401 Msa0554710:CDS
GCAATGTATCTATCCGTCGG+TGG 0.687913 4_1:+52344237 Msa0554710:CDS
GAATTTGAGAAGCTCCTGGG+AGG 0.692091 4_1:+52343406 Msa0554710:CDS
GAACTGACAAAGTCTGACAG+AGG 0.717407 4_1:+52343454 Msa0554710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTGATTCTAATATAA+AGG - chr4_1:52339603-52339622 None:intergenic 10.0%
!! TATTATGAGATTTATATATT+GGG - chr4_1:52339976-52339995 None:intergenic 10.0%
!! ATATTATGAGATTTATATAT+TGG - chr4_1:52339977-52339996 None:intergenic 10.0%
!! TATATATAAACTAAAAAGAT+CGG + chr4_1:52342513-52342532 Msa0554710:intron 10.0%
!! AAATTGAAGAAATAAAAAAT+AGG - chr4_1:52342602-52342621 None:intergenic 10.0%
!!! TTTTATTTCTTCAATTTTTA+CGG + chr4_1:52342605-52342624 Msa0554710:intron 10.0%
!!! AAGTTTAAAATTATTAATTC+AGG - chr4_1:52344046-52344065 None:intergenic 10.0%
!!! TTTTACTCATTTTATTATTT+AGG + chr4_1:52344158-52344177 Msa0554710:intron 10.0%
!!! ACATTGTTATTTCATAAAAT+GGG - chr4_1:52338983-52339002 None:intergenic 15.0%
!! ATTATGAGATTTATATATTG+GGG - chr4_1:52339975-52339994 None:intergenic 15.0%
!!! TTTCATTTATTTTTCCTAAT+TGG + chr4_1:52340476-52340495 Msa0554710:intron 15.0%
!! AAAATAAATGACAGTTAAAA+AGG - chr4_1:52341964-52341983 None:intergenic 15.0%
!! GCTTTAATTAATACTTAAAA+AGG + chr4_1:52342142-52342161 Msa0554710:intron 15.0%
!! AATTAATACTTAAAAAGGAA+CGG + chr4_1:52342147-52342166 Msa0554710:intron 15.0%
!! AATATCATTTAAATTCACTA+AGG - chr4_1:52342707-52342726 None:intergenic 15.0%
!! TTTATTGAAAGAATAAGAAT+AGG + chr4_1:52342849-52342868 Msa0554710:intron 15.0%
!! AATTAACTACATAATAAGTA+GGG - chr4_1:52343193-52343212 None:intergenic 15.0%
!!! AATTTTTGAAATAGTTTTTG+TGG + chr4_1:52343558-52343577 Msa0554710:intron 15.0%
!!! TCAAAAAGAATTTGTTATAA+AGG - chr4_1:52343629-52343648 None:intergenic 15.0%
!! TAAAAGTTGGATAATATTAT+TGG - chr4_1:52344143-52344162 None:intergenic 15.0%
!! ATAATAAAATGAGTAAAAGT+TGG - chr4_1:52344156-52344175 None:intergenic 15.0%
!!! TTACGTTTTCTTAATTATTA+TGG + chr4_1:52344907-52344926 Msa0554710:intron 15.0%
!!! TATGTTTGAAAAAAAAGTTT+TGG + chr4_1:52345079-52345098 Msa0554710:intron 15.0%
!!! TTGATTTAAAATATAATTGC+AGG + chr4_1:52345564-52345583 Msa0554710:three_prime_UTR 15.0%
!!! CATTGTTATTTCATAAAATG+GGG - chr4_1:52338982-52339001 None:intergenic 20.0%
!!! CACATTGTTATTTCATAAAA+TGG - chr4_1:52338984-52339003 None:intergenic 20.0%
!!! CATTTTATGAAATAACAATG+TGG + chr4_1:52338982-52339001 Msa0554710:intron 20.0%
!!! ATGGAAAAAAGTAATCTTTT+TGG + chr4_1:52339005-52339024 Msa0554710:intron 20.0%
!!! AAAGTAATCTTTTTGGAAAA+TGG + chr4_1:52339012-52339031 Msa0554710:intron 20.0%
!!! TTTGTTGACATTTTTTTTGT+GGG + chr4_1:52339465-52339484 Msa0554710:intron 20.0%
!! TTAAGGAGTTAAAGAATTAA+AGG + chr4_1:52339734-52339753 Msa0554710:intron 20.0%
!! TTAACTCATCCTTATAAAAT+CGG - chr4_1:52339952-52339971 None:intergenic 20.0%
!!! TTTGAAATGAATTTATAGAG+TGG + chr4_1:52340121-52340140 Msa0554710:intron 20.0%
!! TTGAAATGAATTTATAGAGT+GGG + chr4_1:52340122-52340141 Msa0554710:intron 20.0%
!! ATTATTGAGCTTGTAAAATT+TGG + chr4_1:52340314-52340333 Msa0554710:intron 20.0%
!! TGAACTTTCTTAAACATATA+AGG - chr4_1:52340396-52340415 None:intergenic 20.0%
!! AAATTAGATGATTTCATACA+AGG - chr4_1:52340746-52340765 None:intergenic 20.0%
!! TTCATAAACATACACATAAA+AGG - chr4_1:52340935-52340954 None:intergenic 20.0%
!!! TTTTATGTGTATGTTTATGA+AGG + chr4_1:52340934-52340953 Msa0554710:intron 20.0%
!! AAAGATAATGCAAGAAAATA+AGG + chr4_1:52341284-52341303 Msa0554710:intron 20.0%
!! ACATAAACAACAAAACTTAT+TGG + chr4_1:52342095-52342114 Msa0554710:intron 20.0%
!! TTCTTCAAATAATATCAGTT+GGG - chr4_1:52342188-52342207 None:intergenic 20.0%
!! TTTCTTCAAATAATATCAGT+TGG - chr4_1:52342189-52342208 None:intergenic 20.0%
!! TTGGTACTTAATAATTTACA+TGG - chr4_1:52342346-52342365 None:intergenic 20.0%
!! TAAAAATGTTTACCTGATAA+TGG + chr4_1:52342452-52342471 Msa0554710:intron 20.0%
!! ATTTCTACCAAAAAAAAACT+CGG - chr4_1:52342763-52342782 None:intergenic 20.0%
!! AAATGAAGGATATATAAGAT+AGG + chr4_1:52343014-52343033 Msa0554710:intron 20.0%
!! ATTAACTACATAATAAGTAG+GGG - chr4_1:52343192-52343211 None:intergenic 20.0%
!! GAATTAACTACATAATAAGT+AGG - chr4_1:52343194-52343213 None:intergenic 20.0%
!! TAGTGTTAGAATAAAACATA+AGG - chr4_1:52343244-52343263 None:intergenic 20.0%
!! AACTAAGAAATACAAAAAAG+AGG - chr4_1:52343271-52343290 None:intergenic 20.0%
!! GAAAAATAGATATATTACGA+AGG - chr4_1:52343339-52343358 None:intergenic 20.0%
!! AAAATTATGATATATACCTC+TGG - chr4_1:52343530-52343549 None:intergenic 20.0%
!! AAGTATATAGTTGTCTAATT+CGG + chr4_1:52343649-52343668 Msa0554710:intron 20.0%
!!! TATTTGTTCTAAATGTAAAG+TGG + chr4_1:52344399-52344418 Msa0554710:intron 20.0%
!! TGTTCTTTCATAAAATATGT+TGG - chr4_1:52344793-52344812 None:intergenic 20.0%
!!! ATGAGTTATAGAAACATTTT+TGG + chr4_1:52345410-52345429 Msa0554710:three_prime_UTR 20.0%
!! TAACATTTAAGCTAATACAA+TGG - chr4_1:52345480-52345499 None:intergenic 20.0%
! TGAAGTGTAAAATTTGATGA+TGG - chr4_1:52338737-52338756 None:intergenic 25.0%
! TTACAACATCATCAATAACA+AGG + chr4_1:52338824-52338843 Msa0554710:five_prime_UTR 25.0%
! TTATGAAATAACAATGTGGA+TGG + chr4_1:52338986-52339005 Msa0554710:intron 25.0%
!!! CTTTGATTTTGTTGTTGTTA+TGG + chr4_1:52339072-52339091 Msa0554710:intron 25.0%
!!! CTTTGTTGACATTTTTTTTG+TGG + chr4_1:52339464-52339483 Msa0554710:intron 25.0%
!!! TTGTTGACATTTTTTTTGTG+GGG + chr4_1:52339466-52339485 Msa0554710:intron 25.0%
! ACTAATTAAAAAGAACACTC+AGG + chr4_1:52339497-52339516 Msa0554710:intron 25.0%
! CAAAATTATACAAAGAAGCT+TGG + chr4_1:52339615-52339634 Msa0554710:intron 25.0%
! TATCTATAACTATTCATCCT+GGG - chr4_1:52340096-52340115 None:intergenic 25.0%
! ATATCTATAACTATTCATCC+TGG - chr4_1:52340097-52340116 None:intergenic 25.0%
! AACTATCGAAATCAATGAAA+GGG - chr4_1:52340254-52340273 None:intergenic 25.0%
! AAACTATCGAAATCAATGAA+AGG - chr4_1:52340255-52340274 None:intergenic 25.0%
!!! TTTATTTTTCCTAATTGGTG+TGG + chr4_1:52340481-52340500 Msa0554710:intron 25.0%
! ATATAAGAATGAGGAAATAG+AGG - chr4_1:52340664-52340683 None:intergenic 25.0%
! TCTATTTCCTCATTCTTATA+TGG + chr4_1:52340663-52340682 Msa0554710:CDS 25.0%
! CTTGTAGTAAGTATATGTTT+AGG + chr4_1:52340958-52340977 Msa0554710:CDS 25.0%
! AAATGACAGTTAAAAAGGAA+CGG - chr4_1:52341959-52341978 None:intergenic 25.0%
! GCTCTGCAATAAATAATTAA+GGG - chr4_1:52342062-52342081 None:intergenic 25.0%
! TGTTTATGTGTATCTATTTC+TGG - chr4_1:52342084-52342103 None:intergenic 25.0%
!!! TATGTGTAAATTTTTTGCTC+AGG + chr4_1:52342218-52342237 Msa0554710:intron 25.0%
! TATTAAGTACCAACTATTGT+TGG + chr4_1:52342353-52342372 Msa0554710:intron 25.0%
!!! GCATTTGATTTTGTCTATTT+TGG + chr4_1:52342386-52342405 Msa0554710:intron 25.0%
! AATATCTATAAGCCATTATC+AGG - chr4_1:52342467-52342486 None:intergenic 25.0%
!!! TATTGAAAAGCTTTATTGCT+AGG + chr4_1:52342651-52342670 Msa0554710:intron 25.0%
!!! TTTTTGGTAGAAATACTGTT+AGG + chr4_1:52342769-52342788 Msa0554710:intron 25.0%
! TCAAATTTGTAACCATTAAG+TGG - chr4_1:52343145-52343164 None:intergenic 25.0%
! TTAACTACATAATAAGTAGG+GGG - chr4_1:52343191-52343210 None:intergenic 25.0%
! TTAGTAAATGAACAGTTAGA+GGG - chr4_1:52343216-52343235 None:intergenic 25.0%
! ATTAGTAAATGAACAGTTAG+AGG - chr4_1:52343217-52343236 None:intergenic 25.0%
!!! TTAACGGATTTAATCATTGT+GGG - chr4_1:52343299-52343318 None:intergenic 25.0%
!!! TTTAACGGATTTAATCATTG+TGG - chr4_1:52343300-52343319 None:intergenic 25.0%
! AGTATATAGTTGTCTAATTC+GGG + chr4_1:52343650-52343669 Msa0554710:intron 25.0%
! TGTAGGAATATGCAATTTAT+TGG + chr4_1:52343822-52343841 Msa0554710:CDS 25.0%
! GTAGGAATATGCAATTTATT+GGG + chr4_1:52343823-52343842 Msa0554710:CDS 25.0%
! TTAACCTAGAAAAAACACAA+AGG - chr4_1:52343869-52343888 None:intergenic 25.0%
! TATTATTTAGGCAGTAACAA+TGG + chr4_1:52344170-52344189 Msa0554710:intron 25.0%
! ATTATTTAGGCAGTAACAAT+GGG + chr4_1:52344171-52344190 Msa0554710:intron 25.0%
!!! TTATCAATGTCATTTTCATC+TGG + chr4_1:52345112-52345131 Msa0554710:intron 25.0%
!!! CGCTAACATTTTTTTTTTAC+AGG + chr4_1:52345142-52345161 Msa0554710:intron 25.0%
!! CAACTCTTGTATAGTATTTT+TGG + chr4_1:52345221-52345240 Msa0554710:CDS 25.0%
! TCTATAACTCATTCAACAAA+TGG - chr4_1:52345402-52345421 None:intergenic 25.0%
!!! TATAGAAACATTTTTGGTGA+AGG + chr4_1:52345416-52345435 Msa0554710:three_prime_UTR 25.0%
AGTTGTATGTTACACAATCT+TGG - chr4_1:52338681-52338700 None:intergenic 30.0%
!! TTTTTGGAAAATGGAGTTGT+GGG + chr4_1:52339021-52339040 Msa0554710:intron 30.0%
GATAGTAAAGATGAAAATCC+AGG + chr4_1:52339205-52339224 Msa0554710:CDS 30.0%
TTACAAGGGTTATATTGCAT+TGG + chr4_1:52339365-52339384 Msa0554710:intron 30.0%
!! AGGTTGAGTTAATGGATTTA+AGG + chr4_1:52339717-52339736 Msa0554710:intron 30.0%
!! CCTTATAAAATCGGTTTGTA+AGG - chr4_1:52339943-52339962 None:intergenic 30.0%
!! CCTTACAAACCGATTTTATA+AGG + chr4_1:52339940-52339959 Msa0554710:intron 30.0%
CTAACTGATCCTTACAAAAT+TGG - chr4_1:52340165-52340184 None:intergenic 30.0%
! CAATTTTGTAAGGATCAGTT+AGG + chr4_1:52340163-52340182 Msa0554710:intron 30.0%
! AAATCAATGAAAGGGAGTTT+TGG - chr4_1:52340246-52340265 None:intergenic 30.0%
GTAGTATACCTTAGAAAACA+TGG + chr4_1:52340361-52340380 Msa0554710:intron 30.0%
ATTTGACAGAAGTTCATTGT+TGG - chr4_1:52340435-52340454 None:intergenic 30.0%
TCATTATTTCCACACCAATT+AGG - chr4_1:52340493-52340512 None:intergenic 30.0%
! TTTTCTTTCAAAAGTCCCTT+TGG + chr4_1:52340524-52340543 Msa0554710:intron 30.0%
TTTCTTTCAAAAGTCCCTTT+GGG + chr4_1:52340525-52340544 Msa0554710:intron 30.0%
TTCTTATATGGCTACCATAT+TGG + chr4_1:52340675-52340694 Msa0554710:CDS 30.0%
TCTTATATGGCTACCATATT+GGG + chr4_1:52340676-52340695 Msa0554710:CDS 30.0%
ATCTATAGAAATGCTCTCTA+AGG - chr4_1:52340806-52340825 None:intergenic 30.0%
AACATACACATAAAAGGAAG+TGG - chr4_1:52340929-52340948 None:intergenic 30.0%
GTAGTAAGTATATGTTTAGG+AGG + chr4_1:52340961-52340980 Msa0554710:CDS 30.0%
TTTATTGGATCTTCTTTCAG+TGG + chr4_1:52340988-52341007 Msa0554710:CDS 30.0%
TTATTGGATCTTCTTTCAGT+GGG + chr4_1:52340989-52341008 Msa0554710:CDS 30.0%
GCTTTAACAGTCTTGATAAA+AGG + chr4_1:52341206-52341225 Msa0554710:intron 30.0%
TGCAAGAAAATAAGGAAAAG+AGG + chr4_1:52341292-52341311 Msa0554710:intron 30.0%
TGCAACATCAAAATCTCTTT+GGG + chr4_1:52341400-52341419 Msa0554710:CDS 30.0%
! TTATTTGTTGGTACTGGAAT+GGG + chr4_1:52341440-52341459 Msa0554710:CDS 30.0%
!!! GTTTTTTTTTCTGCAGTATG+AGG + chr4_1:52341666-52341685 Msa0554710:intron 30.0%
TAATAATTGTTAGCTCCACT+TGG + chr4_1:52341721-52341740 Msa0554710:intron 30.0%
! ATACCAACCAACTATTTCTT+TGG - chr4_1:52341849-52341868 None:intergenic 30.0%
! AAAGAAATAGTTGGTTGGTA+TGG + chr4_1:52341848-52341867 Msa0554710:intron 30.0%
GGCTCTGCAATAAATAATTA+AGG - chr4_1:52342063-52342082 None:intergenic 30.0%
TAATACTTAAAAAGGAACGG+AGG + chr4_1:52342150-52342169 Msa0554710:intron 30.0%
TAGACAAAATCAAATGCACT+AGG - chr4_1:52342383-52342402 None:intergenic 30.0%
!! TTTGTCTATTTTGGACTCTT+TGG + chr4_1:52342395-52342414 Msa0554710:intron 30.0%
TAAACTAAAAAGATCGGCAA+TGG + chr4_1:52342519-52342538 Msa0554710:intron 30.0%
CTAACAGTATCAATCATAAC+GGG - chr4_1:52342737-52342756 None:intergenic 30.0%
CCTAACAGTATCAATCATAA+CGG - chr4_1:52342738-52342757 None:intergenic 30.0%
!!! TTAGGAACCGAGTTTTTTTT+TGG + chr4_1:52342753-52342772 Msa0554710:intron 30.0%
! CTTGTCCAATTATTTTCACT+CGG - chr4_1:52342797-52342816 None:intergenic 30.0%
TAGCTCATTTCTATCTTATG+TGG - chr4_1:52342995-52343014 None:intergenic 30.0%
GATAGAAATGAGCTAAATGA+AGG + chr4_1:52343000-52343019 Msa0554710:intron 30.0%
! AGCAAGTTGGACAAATTATA+AGG + chr4_1:52343052-52343071 Msa0554710:intron 30.0%
TTATAAGGAATCCAGAGAAA+AGG + chr4_1:52343067-52343086 Msa0554710:intron 30.0%
TAACTACATAATAAGTAGGG+GGG - chr4_1:52343190-52343209 None:intergenic 30.0%
AAGCTCTCAGAAATATTGTT+TGG + chr4_1:52343496-52343515 Msa0554710:CDS 30.0%
ATAGAAAACAGCATTTATGC+CGG - chr4_1:52343746-52343765 None:intergenic 30.0%
! TTTGGTGTATCATCAAAGAT+AGG + chr4_1:52343790-52343809 Msa0554710:CDS 30.0%
!!! AACTCCTTTGTGTTTTTTCT+AGG + chr4_1:52343862-52343881 Msa0554710:intron 30.0%
! AGTTATTTCGATGATTCTGA+TGG + chr4_1:52343944-52343963 Msa0554710:CDS 30.0%
! ATGATTCTGATGGATAAACT+TGG + chr4_1:52343954-52343973 Msa0554710:CDS 30.0%
AGAAAACTTCAACTTGCATT+TGG + chr4_1:52344279-52344298 Msa0554710:intron 30.0%
ACCTTGCTTATGAATTTGAA+AGG + chr4_1:52344304-52344323 Msa0554710:intron 30.0%
!! TTATTTGGTAGTGCAAAAGA+AGG - chr4_1:52344338-52344357 None:intergenic 30.0%
TAGAGATCTTCGAAGTTATT+TGG - chr4_1:52344353-52344372 None:intergenic 30.0%
AAATTGCAGTTCATACTTTG+CGG - chr4_1:52344979-52344998 None:intergenic 30.0%
! TTTTGTGAAGAAATATGTCC+TGG + chr4_1:52345268-52345287 Msa0554710:CDS 30.0%
AAATATGTCCTGGAAACAAA+AGG + chr4_1:52345278-52345297 Msa0554710:CDS 30.0%
AATATGTCCTGGAAACAAAA+GGG + chr4_1:52345279-52345298 Msa0554710:CDS 30.0%
GGCAAAATTTCATGTTAAAG+AGG - chr4_1:52345459-52345478 None:intergenic 30.0%
TAGACAAATTAAAGGGATGA+GGG + chr4_1:52345589-52345608 Msa0554710:three_prime_UTR 30.0%
TTGCGTAAGAACGAAATCTA+TGG + chr4_1:52338636-52338655 Msa0554710:five_prime_UTR 35.0%
GTTGAAGAAGAAGAAGAAGA+AGG - chr4_1:52338712-52338731 None:intergenic 35.0%
!! CTTTTTGGAAAATGGAGTTG+TGG + chr4_1:52339020-52339039 Msa0554710:intron 35.0%
!!! TTTTGTTGTTGTTATGGTGC+AGG + chr4_1:52339078-52339097 Msa0554710:intron 35.0%
TTGAAAGGTAATCTGTTGTG+AGG + chr4_1:52339107-52339126 Msa0554710:five_prime_UTR 35.0%
TCTGTTGTGAGGTTTGTATA+AGG + chr4_1:52339118-52339137 Msa0554710:five_prime_UTR 35.0%
GAATAAATCCCAAAACAGCA+AGG - chr4_1:52339233-52339252 None:intergenic 35.0%
TGTGTGTGAGACTGAATATT+TGG + chr4_1:52339319-52339338 Msa0554710:intron 35.0%
GTGTGTGAGACTGAATATTT+GGG + chr4_1:52339320-52339339 Msa0554710:intron 35.0%
TGTGTGAGACTGAATATTTG+GGG + chr4_1:52339321-52339340 Msa0554710:intron 35.0%
CTGAATATTTGGGGAAGAAA+TGG + chr4_1:52339330-52339349 Msa0554710:intron 35.0%
ATTTGGGGAAGAAATGGAAA+TGG + chr4_1:52339336-52339355 Msa0554710:intron 35.0%
!!! TGGAAATGGCTACTTTTACA+AGG + chr4_1:52339350-52339369 Msa0554710:intron 35.0%
!!! GGAAATGGCTACTTTTACAA+GGG + chr4_1:52339351-52339370 Msa0554710:intron 35.0%
!!! TGACATTTTTTTTGTGGGGT+AGG + chr4_1:52339470-52339489 Msa0554710:intron 35.0%
!!! GACATTTTTTTTGTGGGGTA+GGG + chr4_1:52339471-52339490 Msa0554710:intron 35.0%
!!! ACATTTTTTTTGTGGGGTAG+GGG + chr4_1:52339472-52339491 Msa0554710:intron 35.0%
TGGACGCTTGTATAGAATAA+AGG + chr4_1:52339899-52339918 Msa0554710:intron 35.0%
!! AAAATCGGTTTGTAAGGTGA+GGG - chr4_1:52339937-52339956 None:intergenic 35.0%
!! TAAAATCGGTTTGTAAGGTG+AGG - chr4_1:52339938-52339957 None:intergenic 35.0%
TGAGCTTGTAAAATTTGGCA+TGG + chr4_1:52340319-52340338 Msa0554710:intron 35.0%
! ATGACTGACCATGTTTTCTA+AGG - chr4_1:52340372-52340391 None:intergenic 35.0%
! GAAGTTCATTGTTGGTTACT+TGG - chr4_1:52340427-52340446 None:intergenic 35.0%
TTCTTTCAAAAGTCCCTTTG+GGG + chr4_1:52340526-52340545 Msa0554710:intron 35.0%
ACGCACTGAAGATATGAAAA+AGG - chr4_1:52340589-52340608 None:intergenic 35.0%
ATGGTAGCCATATAAGAATG+AGG - chr4_1:52340673-52340692 None:intergenic 35.0%
! GATGAAAGAGTTTGAAGCTT+TGG - chr4_1:52340716-52340735 None:intergenic 35.0%
!! GAGAGCATTTCTATAGATCT+CGG + chr4_1:52340808-52340827 Msa0554710:CDS 35.0%
!!! TGTTTAGGAGGTGCTTTTAT+TGG + chr4_1:52340973-52340992 Msa0554710:CDS 35.0%
ATTACTGCTCCAATGATCAT+AGG - chr4_1:52341066-52341085 None:intergenic 35.0%
TGAGCTGGATAACTCTTTAT+AGG + chr4_1:52341092-52341111 Msa0554710:intron 35.0%
! AACGTAGTGGAATAAGAAGA+TGG - chr4_1:52341250-52341269 None:intergenic 35.0%
CTTCTTATTCCACTACGTTT+CGG + chr4_1:52341251-52341270 Msa0554710:intron 35.0%
! TGTTTTATACCGAAACGTAG+TGG - chr4_1:52341263-52341282 None:intergenic 35.0%
ATAAGGAAAAGAGGTCAAAC+AGG + chr4_1:52341301-52341320 Msa0554710:intron 35.0%
GTGCAACATCAAAATCTCTT+TGG + chr4_1:52341399-52341418 Msa0554710:intron 35.0%
GCAACATCAAAATCTCTTTG+GGG + chr4_1:52341401-52341420 Msa0554710:CDS 35.0%
!! CTTTTGGGAAGGTTATTTGT+TGG + chr4_1:52341428-52341447 Msa0554710:CDS 35.0%
! GTTATTTGTTGGTACTGGAA+TGG + chr4_1:52341439-52341458 Msa0554710:CDS 35.0%
ATTATTACCAGTGTTGTGCT+TGG - chr4_1:52341558-52341577 None:intergenic 35.0%
CAACACTTCAGATTGAACAA+GGG - chr4_1:52341635-52341654 None:intergenic 35.0%
TTAGCTCCACTTGGATTAAT+AGG + chr4_1:52341730-52341749 Msa0554710:intron 35.0%
! AACCAACTATTTCTTTGGCT+GGG - chr4_1:52341844-52341863 None:intergenic 35.0%
GTTGGTATGGAATGTCAAAT+TGG + chr4_1:52341861-52341880 Msa0554710:intron 35.0%
!!! GTGTAAATTTTTTGCTCAGG+TGG + chr4_1:52342221-52342240 Msa0554710:intron 35.0%
!!! TAAATTTTTTGCTCAGGTGG+CGG + chr4_1:52342224-52342243 Msa0554710:intron 35.0%
CTAGGATAACCAACAATAGT+TGG - chr4_1:52342365-52342384 None:intergenic 35.0%
!! TATTTTGGACTCTTTGGTGT+AGG + chr4_1:52342401-52342420 Msa0554710:intron 35.0%
! GACTATATTTTCCTGATGTG+AGG + chr4_1:52342627-52342646 Msa0554710:intron 35.0%
CCGTTATGATTGATACTGTT+AGG + chr4_1:52342735-52342754 Msa0554710:intron 35.0%
AGGAACCGAGTGAAAATAAT+TGG + chr4_1:52342789-52342808 Msa0554710:intron 35.0%
GAGAAATGGTTGTACTAGAA+GGG - chr4_1:52343119-52343138 None:intergenic 35.0%
AGAGAAATGGTTGTACTAGA+AGG - chr4_1:52343120-52343139 None:intergenic 35.0%
CCATTAAGTGGATAGAGAAA+TGG - chr4_1:52343133-52343152 None:intergenic 35.0%
CCATTTCTCTATCCACTTAA+TGG + chr4_1:52343130-52343149 Msa0554710:intron 35.0%
TTCTGAGCAAAGCGAAAAAT+AGG - chr4_1:52343361-52343380 None:intergenic 35.0%
! ATTTTTCGCTTTGCTCAGAA+AGG + chr4_1:52343361-52343380 Msa0554710:intron 35.0%
TATGATATATACCTCTGGCA+TGG - chr4_1:52343525-52343544 None:intergenic 35.0%
TCACTGCAAAATGCATTTAG+TGG - chr4_1:52343684-52343703 None:intergenic 35.0%
! CATTTTGCAGTGATGTTCAT+TGG + chr4_1:52343691-52343710 Msa0554710:intron 35.0%
TGATACACCAAAGCTTTCAA+AGG - chr4_1:52343782-52343801 None:intergenic 35.0%
AAGATAGGAAACACATGTGT+AGG + chr4_1:52343805-52343824 Msa0554710:CDS 35.0%
! TTCTGATGGATAAACTTGGA+AGG + chr4_1:52343958-52343977 Msa0554710:CDS 35.0%
GCCTTTCAAATTCATAAGCA+AGG - chr4_1:52344308-52344327 None:intergenic 35.0%
! CTTATGAATTTGAAAGGCGT+TGG + chr4_1:52344310-52344329 Msa0554710:intron 35.0%
TAAAGTGGAATATGCAATGC+AGG + chr4_1:52344414-52344433 Msa0554710:intron 35.0%
GATCTTGCCAGGTAATATTT+CGG - chr4_1:52344492-52344511 None:intergenic 35.0%
! CTGTTGAGATCTTTGATAGT+GGG + chr4_1:52344590-52344609 Msa0554710:intron 35.0%
CTCACATTTATCGACACTTT+AGG + chr4_1:52344616-52344635 Msa0554710:intron 35.0%
TAAAAGCTAATTCCACGGAA+GGG - chr4_1:52344733-52344752 None:intergenic 35.0%
TTAAAAGCTAATTCCACGGA+AGG - chr4_1:52344734-52344753 None:intergenic 35.0%
!!! TTCCGTGGAATTAGCTTTTA+AGG + chr4_1:52344733-52344752 Msa0554710:intron 35.0%
AGCCTTAAAAGCTAATTCCA+CGG - chr4_1:52344738-52344757 None:intergenic 35.0%
!!! GCTTTTAAGGCTGAGTTATA+TGG + chr4_1:52344746-52344765 Msa0554710:intron 35.0%
! CCACTTTCAATTTGAAGTGT+TGG - chr4_1:52344858-52344877 None:intergenic 35.0%
CCAACACTTCAAATTGAAAG+TGG + chr4_1:52344855-52344874 Msa0554710:intron 35.0%
TTCAAATTGAAAGTGGTGTC+TGG + chr4_1:52344862-52344881 Msa0554710:intron 35.0%
!!! GTTATTATTTTTGCGCATGC+TGG + chr4_1:52345184-52345203 Msa0554710:CDS 35.0%
ATAGCCTAAATGAGCTGAAT+AGG + chr4_1:52345344-52345363 Msa0554710:exon 35.0%
AGATCCTATTCAGCTCATTT+AGG - chr4_1:52345351-52345370 None:intergenic 35.0%
AATAGGATCTCATATGGATG+AGG + chr4_1:52345361-52345380 Msa0554710:three_prime_UTR 35.0%
ATCTCATATGGATGAGGTAT+AGG + chr4_1:52345367-52345386 Msa0554710:three_prime_UTR 35.0%
TCTCATATGGATGAGGTATA+GGG + chr4_1:52345368-52345387 Msa0554710:three_prime_UTR 35.0%
TGCAGGACTAGACAAATTAA+AGG + chr4_1:52345581-52345600 Msa0554710:three_prime_UTR 35.0%
GCAGGACTAGACAAATTAAA+GGG + chr4_1:52345582-52345601 Msa0554710:three_prime_UTR 35.0%
CTAGACAAATTAAAGGGATG+AGG + chr4_1:52345588-52345607 Msa0554710:three_prime_UTR 35.0%
!! TGGTGCAGGAATTTGTTGAA+AGG + chr4_1:52339092-52339111 Msa0554710:intron 40.0%
! TTTTATTGTTTCGCGATGCG+AGG + chr4_1:52339142-52339161 Msa0554710:exon 40.0%
!!! CATTTTTTTTGTGGGGTAGG+GGG + chr4_1:52339473-52339492 Msa0554710:intron 40.0%
AGGTGTTTGTCATCTGCTTA+TGG - chr4_1:52339662-52339681 None:intergenic 40.0%
ACCTAATTGAATCACAGTCG+AGG + chr4_1:52339678-52339697 Msa0554710:intron 40.0%
CCTAATTGAATCACAGTCGA+GGG + chr4_1:52339679-52339698 Msa0554710:intron 40.0%
CTAATTGAATCACAGTCGAG+GGG + chr4_1:52339680-52339699 Msa0554710:intron 40.0%
TAATTGAATCACAGTCGAGG+GGG + chr4_1:52339681-52339700 Msa0554710:intron 40.0%
GTAGCTCAAGGTTGAGTTAA+TGG + chr4_1:52339709-52339728 Msa0554710:intron 40.0%
CTTTAGCGCAGTAGAAAAAG+CGG + chr4_1:52339851-52339870 Msa0554710:intron 40.0%
ATTCTATACAAGCGTCCAGA+CGG - chr4_1:52339897-52339916 None:intergenic 40.0%
!! AAATCGGTTTGTAAGGTGAG+GGG - chr4_1:52339936-52339955 None:intergenic 40.0%
!! GTAAATGGTTGGTGATGGAT+AGG - chr4_1:52340005-52340024 None:intergenic 40.0%
!! TGGATGTAAATGGTTGGTGA+TGG - chr4_1:52340010-52340029 None:intergenic 40.0%
AACTATTCATCCTGGGACTT+GGG - chr4_1:52340089-52340108 None:intergenic 40.0%
TAACTATTCATCCTGGGACT+TGG - chr4_1:52340090-52340109 None:intergenic 40.0%
AAAATTGGCTGATCAGGTGA+GGG - chr4_1:52340150-52340169 None:intergenic 40.0%
CCTTACAAAATTGGCTGATC+AGG - chr4_1:52340156-52340175 None:intergenic 40.0%
! CCTGATCAGCCAATTTTGTA+AGG + chr4_1:52340153-52340172 Msa0554710:intron 40.0%
TTACAAACCAACTCCCCAAA+GGG - chr4_1:52340542-52340561 None:intergenic 40.0%
ATTACAAACCAACTCCCCAA+AGG - chr4_1:52340543-52340562 None:intergenic 40.0%
GAAGCGTATCATACCCAATA+TGG - chr4_1:52340692-52340711 None:intergenic 40.0%
! TCTATAGATCTCGGCTTTAG+TGG + chr4_1:52340817-52340836 Msa0554710:CDS 40.0%
! CTATAGATCTCGGCTTTAGT+GGG + chr4_1:52340818-52340837 Msa0554710:CDS 40.0%
! TATAGATCTCGGCTTTAGTG+GGG + chr4_1:52340819-52340838 Msa0554710:CDS 40.0%
TGTGCTTTGCCTATGATCAT+TGG + chr4_1:52341054-52341073 Msa0554710:CDS 40.0%
TGATCATTGGAGCAGTAATG+AGG + chr4_1:52341067-52341086 Msa0554710:CDS 40.0%
! GGAAGGTTATTTGTTGGTAC+TGG + chr4_1:52341434-52341453 Msa0554710:CDS 40.0%
CTTCAGATTGAACAAGGGTT+CGG - chr4_1:52341630-52341649 None:intergenic 40.0%
CCAACACTTCAGATTGAACA+AGG - chr4_1:52341636-52341655 None:intergenic 40.0%
! CCTTGTTCAATCTGAAGTGT+TGG + chr4_1:52341633-52341652 Msa0554710:intron 40.0%
GTGAGACCTATTAATCCAAG+TGG - chr4_1:52341739-52341758 None:intergenic 40.0%
ACTCAGATTGCAACATGTCT+TGG + chr4_1:52341791-52341810 Msa0554710:CDS 40.0%
TGCAACATGTCTTGGAATCA+TGG + chr4_1:52341799-52341818 Msa0554710:CDS 40.0%
GCAACATGTCTTGGAATCAT+GGG + chr4_1:52341800-52341819 Msa0554710:CDS 40.0%
ATCATGGGTTCGCTCTTTAT+AGG + chr4_1:52341815-52341834 Msa0554710:CDS 40.0%
ATCCCAGCCAAAGAAATAGT+TGG + chr4_1:52341839-52341858 Msa0554710:CDS 40.0%
! CAACCAACTATTTCTTTGGC+TGG - chr4_1:52341845-52341864 None:intergenic 40.0%
CAGCCAAAGAAATAGTTGGT+TGG + chr4_1:52341843-52341862 Msa0554710:CDS 40.0%
GACAGTTAAAAAGGAACGGA+GGG - chr4_1:52341955-52341974 None:intergenic 40.0%
TGACAGTTAAAAAGGAACGG+AGG - chr4_1:52341956-52341975 None:intergenic 40.0%
TTGACCTTGAAAAGCCAATG+AGG - chr4_1:52342319-52342338 None:intergenic 40.0%
GTGTAGGCTAATTGATTGTG+TGG + chr4_1:52342417-52342436 Msa0554710:intron 40.0%
! CTTTTCAATAGCCTCACATC+AGG - chr4_1:52342641-52342660 None:intergenic 40.0%
! ACAGTATCAATCATAACGGG+AGG - chr4_1:52342734-52342753 None:intergenic 40.0%
GAGAGTAGACTCTCTTCTAA+GGG + chr4_1:52342871-52342890 Msa0554710:intron 40.0%
AAACTTGAATGCAAGGGGAA+AGG - chr4_1:52342960-52342979 None:intergenic 40.0%
CACTCAAACTTGAATGCAAG+GGG - chr4_1:52342965-52342984 None:intergenic 40.0%
CCACTCAAACTTGAATGCAA+GGG - chr4_1:52342966-52342985 None:intergenic 40.0%
ACCACTCAAACTTGAATGCA+AGG - chr4_1:52342967-52342986 None:intergenic 40.0%
! TGCATTCAAGTTTGAGTGGT+TGG + chr4_1:52342967-52342986 Msa0554710:intron 40.0%
CGGATTTAATCATTGTGGGA+GGG - chr4_1:52343295-52343314 None:intergenic 40.0%
ACGGATTTAATCATTGTGGG+AGG - chr4_1:52343296-52343315 None:intergenic 40.0%
AAATTCAGCCTCAGCTTCAA+TGG - chr4_1:52343392-52343411 None:intergenic 40.0%
TTTGTCAGTTCACTCATTGC+AGG - chr4_1:52343445-52343464 None:intergenic 40.0%
TTTGCTTTGCAGCAATTGTC+CGG + chr4_1:52343724-52343743 Msa0554710:CDS 40.0%
! TCAGCTACCTTTGAAAGCTT+TGG + chr4_1:52343772-52343791 Msa0554710:CDS 40.0%
AGTTCTTATGCATCAGGATC+TGG + chr4_1:52344213-52344232 Msa0554710:CDS 40.0%
TATGTGCTATCATTCGCTCT+TGG + chr4_1:52344437-52344456 Msa0554710:CDS 40.0%
CAGGTAATATTTCGGACATG+AGG - chr4_1:52344484-52344503 None:intergenic 40.0%
CTCATGTCCGAAATATTACC+TGG + chr4_1:52344482-52344501 Msa0554710:CDS 40.0%
AATATGCTTGGCTGTGCATT+GGG + chr4_1:52344529-52344548 Msa0554710:CDS 40.0%
CCACTATCAAAGATCTCAAC+AGG - chr4_1:52344592-52344611 None:intergenic 40.0%
CCTGTTGAGATCTTTGATAG+TGG + chr4_1:52344589-52344608 Msa0554710:intron 40.0%
TGTTTAGTCCTAGTCCTAAG+CGG + chr4_1:52344639-52344658 Msa0554710:intron 40.0%
! AGCCTTTACAAGGACTCTTT+TGG - chr4_1:52344701-52344720 None:intergenic 40.0%
AAAAGCTAATTCCACGGAAG+GGG - chr4_1:52344732-52344751 None:intergenic 40.0%
ACAGGTGATAAACTTCTTCG+TGG + chr4_1:52345160-52345179 Msa0554710:intron 40.0%
CAGGTGATAAACTTCTTCGT+GGG + chr4_1:52345161-52345180 Msa0554710:intron 40.0%
AGGTGATAAACTTCTTCGTG+GGG + chr4_1:52345162-52345181 Msa0554710:intron 40.0%
GAGCTGAATAGGATCTCATA+TGG + chr4_1:52345355-52345374 Msa0554710:three_prime_UTR 40.0%
!!! ATCCAGGTACCTTGCTGTTT+TGG + chr4_1:52339221-52339240 Msa0554710:intron 45.0%
!!! TCCAGGTACCTTGCTGTTTT+GGG + chr4_1:52339222-52339241 Msa0554710:intron 45.0%
CCCTCGACTGTGATTCAATT+AGG - chr4_1:52339682-52339701 None:intergenic 45.0%
AATTGAATCACAGTCGAGGG+GGG + chr4_1:52339682-52339701 Msa0554710:intron 45.0%
CAGTAGAAAAAGCGGACAGA+CGG + chr4_1:52339859-52339878 Msa0554710:intron 45.0%
AGTAGAAAAAGCGGACAGAC+GGG + chr4_1:52339860-52339879 Msa0554710:intron 45.0%
TTCTATACAAGCGTCCAGAC+GGG - chr4_1:52339896-52339915 None:intergenic 45.0%
GGTGAGTGGATGTAAATGGT+TGG - chr4_1:52340016-52340035 None:intergenic 45.0%
GTGTGGTGAGTGGATGTAAA+TGG - chr4_1:52340020-52340039 None:intergenic 45.0%
AAATTGGCTGATCAGGTGAG+GGG - chr4_1:52340149-52340168 None:intergenic 45.0%
CAAAATTGGCTGATCAGGTG+AGG - chr4_1:52340151-52340170 None:intergenic 45.0%
!! GGGAGTTTTGGTGCAACAAT+CGG - chr4_1:52340234-52340253 None:intergenic 45.0%
! TACAGAGTGCCAAACCTTGT+TGG + chr4_1:52340610-52340629 Msa0554710:CDS 45.0%
CTCTTTGCGGCATGTAATAG+TGG + chr4_1:52340638-52340657 Msa0554710:CDS 45.0%
TGACTACTCTGTGTTGCAGA+TGG - chr4_1:52340777-52340796 None:intergenic 45.0%
TTGGATCTTCTTTCAGTGGG+TGG + chr4_1:52340992-52341011 Msa0554710:CDS 45.0%
TCATAGGCAAAGCACACAAC+TGG - chr4_1:52341050-52341069 None:intergenic 45.0%
AGCAGTAATGAGGTATGAGC+TGG + chr4_1:52341077-52341096 Msa0554710:intron 45.0%
TCTGTGTCATGTGTCTGTAC+AGG + chr4_1:52341115-52341134 Msa0554710:intron 45.0%
GGAAAAGAGGTCAAACAGGA+AGG + chr4_1:52341305-52341324 Msa0554710:intron 45.0%
!!! ATCTCTTTGGGGCATGCTTT+TGG + chr4_1:52341412-52341431 Msa0554710:CDS 45.0%
!!! TCTCTTTGGGGCATGCTTTT+GGG + chr4_1:52341413-52341432 Msa0554710:CDS 45.0%
ACATAAAGAGCTGCAACAGG+CGG - chr4_1:52341473-52341492 None:intergenic 45.0%
CTCTTTATGTGGCTGAGGTA+TGG + chr4_1:52341483-52341502 Msa0554710:intron 45.0%
!! GTTGTGCTTGGCATTGGTAT+CGG - chr4_1:52341546-52341565 None:intergenic 45.0%
!!! TCAGGTGGCGGATTTGTTTT+TGG + chr4_1:52342236-52342255 Msa0554710:intron 45.0%
!!! CAGGTGGCGGATTTGTTTTT+GGG + chr4_1:52342237-52342256 Msa0554710:intron 45.0%
! TGCTGCACTTGCTCTTTTCA+TGG + chr4_1:52342276-52342295 Msa0554710:CDS 45.0%
!!! GAGTCCTCATTGGCTTTTCA+AGG + chr4_1:52342312-52342331 Msa0554710:CDS 45.0%
GGAGAGTAGACTCTCTTCTA+AGG + chr4_1:52342870-52342889 Msa0554710:intron 45.0%
! CCCTTGCATTCAAGTTTGAG+TGG + chr4_1:52342963-52342982 Msa0554710:intron 45.0%
TAAGATAGGTCCCTGCCTTA+AGG + chr4_1:52343028-52343047 Msa0554710:intron 45.0%
!! TTGTCCAACTTGCTGCCTTA+AGG - chr4_1:52343046-52343065 None:intergenic 45.0%
! GAGTCTTCTCTCCTTTTCTC+TGG - chr4_1:52343081-52343100 None:intergenic 45.0%
GAGAGAAGACTCTCTTCCAA+GGG + chr4_1:52343089-52343108 Msa0554710:intron 45.0%
GTACTAGAAGGGAAAACCCT+TGG - chr4_1:52343108-52343127 None:intergenic 45.0%
! TAATAAGTAGGGGGGTGCAA+GGG - chr4_1:52343182-52343201 None:intergenic 45.0%
! ATAATAAGTAGGGGGGTGCA+AGG - chr4_1:52343183-52343202 None:intergenic 45.0%
AGGAAGAACCATTGAAGCTG+AGG + chr4_1:52343381-52343400 Msa0554710:CDS 45.0%
GCTGAATTTGAGAAGCTCCT+GGG + chr4_1:52343403-52343422 Msa0554710:CDS 45.0%
GAACTGACAAAGTCTGACAG+AGG + chr4_1:52343454-52343473 Msa0554710:CDS 45.0%
! TTCTGAGAGCTTCATTGTGC+CGG - chr4_1:52343488-52343507 None:intergenic 45.0%
ATTTATTGGGTATCTGCCGC+TGG + chr4_1:52343836-52343855 Msa0554710:intron 45.0%
ACACAAAGGAGTTAAGCCAG+CGG - chr4_1:52343855-52343874 None:intergenic 45.0%
! CTTCTCCTCGGTAGCTTTTT+AGG + chr4_1:52343987-52344006 Msa0554710:CDS 45.0%
GCTGCAAGTTCTTATGCATC+AGG + chr4_1:52344207-52344226 Msa0554710:CDS 45.0%
GGAGCAATGTATCTATCCGT+CGG + chr4_1:52344234-52344253 Msa0554710:CDS 45.0%
ATTTCGGACATGAGGAGACA+AGG - chr4_1:52344476-52344495 None:intergenic 45.0%
CAAGCATATTGCCATTGCCT+TGG - chr4_1:52344519-52344538 None:intergenic 45.0%
CAAGGCAATGGCAATATGCT+TGG + chr4_1:52344517-52344536 Msa0554710:CDS 45.0%
CAATATGCTTGGCTGTGCAT+TGG + chr4_1:52344528-52344547 Msa0554710:CDS 45.0%
TCAAAACACCGCTTAGGACT+AGG - chr4_1:52344650-52344669 None:intergenic 45.0%
GGAATCTCAAAACACCGCTT+AGG - chr4_1:52344656-52344675 None:intergenic 45.0%
!! CATCTCTCGTGTTGATGATG+TGG - chr4_1:52344677-52344696 None:intergenic 45.0%
CACATCATCAACACGAGAGA+TGG + chr4_1:52344675-52344694 Msa0554710:intron 45.0%
GGCCAAAAGAGTCCTTGTAA+AGG + chr4_1:52344696-52344715 Msa0554710:intron 45.0%
CTATGTGTTAGTGTCGTGTC+TGG + chr4_1:52344933-52344952 Msa0554710:intron 45.0%
TGCAGTTCATACTTTGCGGT+CGG - chr4_1:52344975-52344994 None:intergenic 45.0%
TTTGCGCATGCTGGAACAAA+TGG + chr4_1:52345193-52345212 Msa0554710:CDS 45.0%
TTGCGCATGCTGGAACAAAT+GGG + chr4_1:52345194-52345213 Msa0554710:CDS 45.0%
!! GTGACTTCCCTTTTGTTTCC+AGG - chr4_1:52345289-52345308 None:intergenic 45.0%
AACAAAAGGGAAGTCACTGC+AGG + chr4_1:52345292-52345311 Msa0554710:CDS 45.0%
!!! TTTATTAATAGTAATTTTAA+CGG - chr4_1:52343315-52343334 None:intergenic 5.0%
AAGACAGCGAGTCGCATCAA+GGG + chr4_1:52339165-52339184 Msa0554710:CDS 50.0%
! TCCCAAAACAGCAAGGTACC+TGG - chr4_1:52339226-52339245 None:intergenic 50.0%
! CATCTGCTTATGGCGCTGAA+GGG - chr4_1:52339652-52339671 None:intergenic 50.0%
! TCATCTGCTTATGGCGCTGA+AGG - chr4_1:52339653-52339672 None:intergenic 50.0%
ACACCAAGCTCGGTAGTGTT+GGG + chr4_1:52340036-52340055 Msa0554710:intron 50.0%
TGGGAAAAAACCCAAGTCCC+AGG + chr4_1:52340076-52340095 Msa0554710:intron 50.0%
! CAAAAGTCCCTTTGGGGAGT+TGG + chr4_1:52340532-52340551 Msa0554710:intron 50.0%
! AGAGTGCCAAACCTTGTTGG+CGG + chr4_1:52340613-52340632 Msa0554710:CDS 50.0%
! CGGCTTTAGTGGGGATACAT+TGG + chr4_1:52340828-52340847 Msa0554710:CDS 50.0%
! AGTGGGGATACATTGGCTGA+AGG + chr4_1:52340835-52340854 Msa0554710:CDS 50.0%
TTCAGTGGGTGGATAGCAGA+TGG + chr4_1:52341003-52341022 Msa0554710:CDS 50.0%
TCAGTGGGTGGATAGCAGAT+GGG + chr4_1:52341004-52341023 Msa0554710:CDS 50.0%
!! TTTGGGGCATGCTTTTGGGA+AGG + chr4_1:52341417-52341436 Msa0554710:CDS 50.0%
! GTTGGTACTGGAATGGGACT+TGG + chr4_1:52341446-52341465 Msa0554710:CDS 50.0%
CATAAAGAGCTGCAACAGGC+GGG - chr4_1:52341472-52341491 None:intergenic 50.0%
GCCTGTTGCAGCTCTTTATG+TGG + chr4_1:52341472-52341491 Msa0554710:CDS 50.0%
GCCACATAAAGAGCTGCAAC+AGG - chr4_1:52341476-52341495 None:intergenic 50.0%
TGCAGCTCTTTATGTGGCTG+AGG + chr4_1:52341478-52341497 Msa0554710:CDS 50.0%
ACCAATGCCAAGCACAACAC+TGG + chr4_1:52341548-52341567 Msa0554710:intron 50.0%
ACCAGTGTTGTGCTTGGCAT+TGG - chr4_1:52341552-52341571 None:intergenic 50.0%
GTGTCTGACATCGACACATG+TGG - chr4_1:52341608-52341627 None:intergenic 50.0%
AAAGAGCAAGTGCAGCAGCA+GGG - chr4_1:52342273-52342292 None:intergenic 50.0%
AAAAGAGCAAGTGCAGCAGC+AGG - chr4_1:52342274-52342293 None:intergenic 50.0%
TCTGTGCAGAGAGTCCTCAT+TGG + chr4_1:52342302-52342321 Msa0554710:CDS 50.0%
!! CAACTTGCTGCCTTAAGGCA+GGG - chr4_1:52343041-52343060 None:intergenic 50.0%
GGAGAGAAGACTCTCTTCCA+AGG + chr4_1:52343088-52343107 Msa0554710:intron 50.0%
! AATAAGTAGGGGGGTGCAAG+GGG - chr4_1:52343181-52343200 None:intergenic 50.0%
GGCTGAATTTGAGAAGCTCC+TGG + chr4_1:52343402-52343421 Msa0554710:CDS 50.0%
GAATTTGAGAAGCTCCTGGG+AGG + chr4_1:52343406-52343425 Msa0554710:CDS 50.0%
GTTTCACATGTAGTCCTCCC+AGG - chr4_1:52343423-52343442 None:intergenic 50.0%
TCTGACAGAGGTGATGAGTC+CGG + chr4_1:52343466-52343485 Msa0554710:CDS 50.0%
! CTTGTTGTGCACGCAACTTC+AGG + chr4_1:52343918-52343937 Msa0554710:intron 50.0%
!! GGAAGGAAAGTGCTTCTCCT+CGG + chr4_1:52343975-52343994 Msa0554710:CDS 50.0%
CCATGCCTAAAAAGCTACCG+AGG - chr4_1:52343995-52344014 None:intergenic 50.0%
!! CCTCGGTAGCTTTTTAGGCA+TGG + chr4_1:52343992-52344011 Msa0554710:CDS 50.0%
GCAATGTATCTATCCGTCGG+TGG + chr4_1:52344237-52344256 Msa0554710:CDS 50.0%
TTACAGCAACATGCCACCGA+CGG - chr4_1:52344253-52344272 None:intergenic 50.0%
! CTATCATTCGCTCTTGGTGC+TGG + chr4_1:52344443-52344462 Msa0554710:CDS 50.0%
GACATGAGGAGACAAGGAAC+TGG - chr4_1:52344470-52344489 None:intergenic 50.0%
CAAGATCAGAGCCAAGGCAA+TGG + chr4_1:52344505-52344524 Msa0554710:CDS 50.0%
GGACTGCTTGAGCCTTTACA+AGG - chr4_1:52344711-52344730 None:intergenic 50.0%
GCAGTTCATACTTTGCGGTC+GGG - chr4_1:52344974-52344993 None:intergenic 50.0%
GAAGACAGCGAGTCGCATCA+AGG + chr4_1:52339164-52339183 Msa0554710:CDS 55.0%
AATCACAGTCGAGGGGGGAT+GGG + chr4_1:52339687-52339706 Msa0554710:intron 55.0%
AAAAAGCGGACAGACGGGCA+CGG + chr4_1:52339865-52339884 Msa0554710:intron 55.0%
TCCACTCACCACACCAAGCT+CGG + chr4_1:52340026-52340045 Msa0554710:intron 55.0%
! CAACACTACCGAGCTTGGTG+TGG - chr4_1:52340037-52340056 None:intergenic 55.0%
CACACCAAGCTCGGTAGTGT+TGG + chr4_1:52340035-52340054 Msa0554710:intron 55.0%
CACCAAGCTCGGTAGTGTTG+GGG + chr4_1:52340037-52340056 Msa0554710:intron 55.0%
! ACCAAGCTCGGTAGTGTTGG+GGG + chr4_1:52340038-52340057 Msa0554710:intron 55.0%
! TCGGTAGTGTTGGGGGATTG+AGG + chr4_1:52340045-52340064 Msa0554710:intron 55.0%
! CGGTAGTGTTGGGGGATTGA+GGG + chr4_1:52340046-52340065 Msa0554710:intron 55.0%
! GGTAGTGTTGGGGGATTGAG+GGG + chr4_1:52340047-52340066 Msa0554710:intron 55.0%
! GTAGTGTTGGGGGATTGAGG+GGG + chr4_1:52340048-52340067 Msa0554710:intron 55.0%
! GGGGATTGAGGGGGTGTATT+GGG + chr4_1:52340057-52340076 Msa0554710:intron 55.0%
CAGTGGGTGGATAGCAGATG+GGG + chr4_1:52341005-52341024 Msa0554710:CDS 55.0%
GGTGGATAGCAGATGGGGTT+GGG + chr4_1:52341010-52341029 Msa0554710:CDS 55.0%
CAGCTGTGCGGGGTACATAT+GGG + chr4_1:52341762-52341781 Msa0554710:CDS 55.0%
AGCTGTGCGGGGTACATATG+GGG + chr4_1:52341763-52341782 Msa0554710:CDS 55.0%
!! CCAACTTGCTGCCTTAAGGC+AGG - chr4_1:52343042-52343061 None:intergenic 55.0%
CCTGCCTTAAGGCAGCAAGT+TGG + chr4_1:52343039-52343058 Msa0554710:intron 55.0%
TTGTTTGGCTGCCATGCCAG+AGG + chr4_1:52343511-52343530 Msa0554710:CDS 55.0%
ACCTGGCAAGATCAGAGCCA+AGG + chr4_1:52344499-52344518 Msa0554710:CDS 55.0%
GAATCACAGTCGAGGGGGGA+TGG + chr4_1:52339686-52339705 Msa0554710:intron 60.0%
AAAAGCGGACAGACGGGCAC+GGG + chr4_1:52339866-52339885 Msa0554710:intron 60.0%
!! ACCGAGCTTGGTGTGGTGAG+TGG - chr4_1:52340030-52340049 None:intergenic 60.0%
TCCCCCAACACTACCGAGCT+TGG - chr4_1:52340042-52340061 None:intergenic 60.0%
! GGGGGATTGAGGGGGTGTAT+TGG + chr4_1:52340056-52340075 Msa0554710:intron 60.0%
!! AGAGCGCCGCCAACAAGGTT+TGG - chr4_1:52340622-52340641 None:intergenic 60.0%
CTTGTTGGCGGCGCTCTTTG+CGG + chr4_1:52340625-52340644 Msa0554710:CDS 60.0%
GGGTGGATAGCAGATGGGGT+TGG + chr4_1:52341009-52341028 Msa0554710:CDS 60.0%
AGGTCTCACCTCCAGCTGTG+CGG + chr4_1:52341750-52341769 Msa0554710:intron 60.0%
TATGTACCCCGCACAGCTGG+AGG - chr4_1:52341761-52341780 None:intergenic 60.0%
CCATATGTACCCCGCACAGC+TGG - chr4_1:52341764-52341783 None:intergenic 60.0%
CCAGCTGTGCGGGGTACATA+TGG + chr4_1:52341761-52341780 Msa0554710:CDS 60.0%
GCTGTGCGGGGTACATATGG+GGG + chr4_1:52341764-52341783 Msa0554710:CDS 60.0%
!! GCCTTGGCTCTGATCTTGCC+AGG - chr4_1:52344503-52344522 None:intergenic 60.0%
GAGGGGGGATGGGTAGCTCA+AGG + chr4_1:52339697-52339716 Msa0554710:intron 65.0%
!! CGCAAAGAGCGCCGCCAACA+AGG - chr4_1:52340627-52340646 None:intergenic 65.0%
GGTCTCACCTCCAGCTGTGC+GGG + chr4_1:52341751-52341770 Msa0554710:intron 65.0%
GTCTCACCTCCAGCTGTGCG+GGG + chr4_1:52341752-52341771 Msa0554710:CDS 65.0%
GCTCAAGCAGTCCCCTTCCG+TGG + chr4_1:52344718-52344737 Msa0554710:intron 65.0%
!!! CGGGCACGGGAGTGCCCGTC+TGG + chr4_1:52339879-52339898 Msa0554710:intron 80.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 52338553 52345652 52338553 ID=Msa0554710;Name=Msa0554710
chr4_1 mRNA 52338553 52345652 52338553 ID=Msa0554710-mRNA-1;Parent=Msa0554710;Name=Msa0554710-mRNA-1;_AED=0.15;_eAED=0.15;_QI=350|1|1|1|0.92|0.85|14|300|478
chr4_1 exon 52338553 52338845 52338553 ID=Msa0554710-mRNA-1:exon:15068;Parent=Msa0554710-mRNA-1
chr4_1 exon 52339100 52339226 52339100 ID=Msa0554710-mRNA-1:exon:15069;Parent=Msa0554710-mRNA-1
chr4_1 exon 52340604 52340697 52340604 ID=Msa0554710-mRNA-1:exon:15070;Parent=Msa0554710-mRNA-1
chr4_1 exon 52340789 52340856 52340789 ID=Msa0554710-mRNA-1:exon:15071;Parent=Msa0554710-mRNA-1
chr4_1 exon 52340956 52341088 52340956 ID=Msa0554710-mRNA-1:exon:15072;Parent=Msa0554710-mRNA-1
chr4_1 exon 52341400 52341499 52341400 ID=Msa0554710-mRNA-1:exon:15073;Parent=Msa0554710-mRNA-1
chr4_1 exon 52341752 52341864 52341752 ID=Msa0554710-mRNA-1:exon:15074;Parent=Msa0554710-mRNA-1
chr4_1 exon 52342240 52342333 52342240 ID=Msa0554710-mRNA-1:exon:15075;Parent=Msa0554710-mRNA-1
chr4_1 exon 52343379 52343532 52343379 ID=Msa0554710-mRNA-1:exon:15076;Parent=Msa0554710-mRNA-1
chr4_1 exon 52343701 52343844 52343701 ID=Msa0554710-mRNA-1:exon:15077;Parent=Msa0554710-mRNA-1
chr4_1 exon 52343940 52344013 52343940 ID=Msa0554710-mRNA-1:exon:15078;Parent=Msa0554710-mRNA-1
chr4_1 exon 52344180 52344268 52344180 ID=Msa0554710-mRNA-1:exon:15079;Parent=Msa0554710-mRNA-1
chr4_1 exon 52344436 52344550 52344436 ID=Msa0554710-mRNA-1:exon:15080;Parent=Msa0554710-mRNA-1
chr4_1 exon 52345164 52345652 52345164 ID=Msa0554710-mRNA-1:exon:15081;Parent=Msa0554710-mRNA-1
chr4_1 five_prime_UTR 52338553 52338845 52338553 ID=Msa0554710-mRNA-1:five_prime_utr;Parent=Msa0554710-mRNA-1
chr4_1 five_prime_UTR 52339100 52339156 52339100 ID=Msa0554710-mRNA-1:five_prime_utr;Parent=Msa0554710-mRNA-1
chr4_1 CDS 52339157 52339226 52339157 ID=Msa0554710-mRNA-1:cds;Parent=Msa0554710-mRNA-1
chr4_1 CDS 52340604 52340697 52340604 ID=Msa0554710-mRNA-1:cds;Parent=Msa0554710-mRNA-1
chr4_1 CDS 52340789 52340856 52340789 ID=Msa0554710-mRNA-1:cds;Parent=Msa0554710-mRNA-1
chr4_1 CDS 52340956 52341088 52340956 ID=Msa0554710-mRNA-1:cds;Parent=Msa0554710-mRNA-1
chr4_1 CDS 52341400 52341499 52341400 ID=Msa0554710-mRNA-1:cds;Parent=Msa0554710-mRNA-1
chr4_1 CDS 52341752 52341864 52341752 ID=Msa0554710-mRNA-1:cds;Parent=Msa0554710-mRNA-1
chr4_1 CDS 52342240 52342333 52342240 ID=Msa0554710-mRNA-1:cds;Parent=Msa0554710-mRNA-1
chr4_1 CDS 52343379 52343532 52343379 ID=Msa0554710-mRNA-1:cds;Parent=Msa0554710-mRNA-1
chr4_1 CDS 52343701 52343844 52343701 ID=Msa0554710-mRNA-1:cds;Parent=Msa0554710-mRNA-1
chr4_1 CDS 52343940 52344013 52343940 ID=Msa0554710-mRNA-1:cds;Parent=Msa0554710-mRNA-1
chr4_1 CDS 52344180 52344268 52344180 ID=Msa0554710-mRNA-1:cds;Parent=Msa0554710-mRNA-1
chr4_1 CDS 52344436 52344550 52344436 ID=Msa0554710-mRNA-1:cds;Parent=Msa0554710-mRNA-1
chr4_1 CDS 52345164 52345352 52345164 ID=Msa0554710-mRNA-1:cds;Parent=Msa0554710-mRNA-1
chr4_1 three_prime_UTR 52345353 52345652 52345353 ID=Msa0554710-mRNA-1:three_prime_utr;Parent=Msa0554710-mRNA-1
Gene Sequence

>Msa0554710

ATGCGAGGAAGACAGCGAGTCGCATCAAGGGAATACTTAATTGTGCATGATAGTAAAGATGAAAATCCAGTGCGTGTACAGAGTGCCAAACCTTGTTGGCGGCGCTCTTTGCGGCATGTAATAGTGGCCTCTATTTCCTCATTCTTATATGGCTACCATATTGGAGTAGTCAATGAAACCTTAGAGAGCATTTCTATAGATCTCGGCTTTAGTGGGGATACATTGGCTGAAGGTCTTGTAGTAAGTATATGTTTAGGAGGTGCTTTTATTGGATCTTCTTTCAGTGGGTGGATAGCAGATGGGGTTGGGCATAGAAGAAGTTTCCAGTTGTGTGCTTTGCCTATGATCATTGGAGCAGTAATGAGTGCAACATCAAAATCTCTTTGGGGCATGCTTTTGGGAAGGTTATTTGTTGGTACTGGAATGGGACTTGGCCCGCCTGTTGCAGCTCTTTATGTGGCTGAGGTCTCACCTCCAGCTGTGCGGGGTACATATGGGGGATTAACTCAGATTGCAACATGTCTTGGAATCATGGGTTCGCTCTTTATAGGAATCCCAGCCAAAGAAATAGTTGGTTGGTGGCGGATTTGTTTTTGGGTATCTGTCATCCCTGCTGCTGCACTTGCTCTTTTCATGGAGATCTGTGCAGAGAGTCCTCATTGGCTTTTCAAGAAAGGAAGAACCATTGAAGCTGAGGCTGAATTTGAGAAGCTCCTGGGAGGACTACATGTGAAACCTGCAATGAGTGAACTGACAAAGTCTGACAGAGGTGATGAGTCCGGCACAATGAAGCTCTCAGAAATATTGTTTGGCTGCCATGCCAGAGTGATGTTCATTGGATCTGCGCTTTTTGCTTTGCAGCAATTGTCCGGCATAAATGCTGTTTTCTATTTCTCTTCAGCTACCTTTGAAAGCTTTGGTGTATCATCAAAGATAGGAAACACATGTGTAGGAATATGCAATTTATTGGGTTCAGTTATTTCGATGATTCTGATGGATAAACTTGGAAGGAAAGTGCTTCTCCTCGGTAGCTTTTTAGGCATGGCAGTAACAATGGGTCTACAAGTCATTGCTGCAAGTTCTTATGCATCAGGATCTGGAGCAATGTATCTATCCGTCGGTGGCATGTTGCTGTATGTGCTATCATTCGCTCTTGGTGCTGGTCCAGTTCCTTGTCTCCTCATGTCCGAAATATTACCTGGCAAGATCAGAGCCAAGGCAATGGCAATATGCTTGGCTGTGCATTGGGTGATAAACTTCTTCGTGGGGTTATTATTTTTGCGCATGCTGGAACAAATGGGAGCACAACTCTTGTATAGTATTTTTGGTTCATTTTCTTTGTTAGCTGTGATTTTTGTGAAGAAATATGTCCTGGAAACAAAAGGGAAGTCACTGCAGGAAATTGAGATTGCACTTCTTGCACAAGAAATAGCCTAA
Protein sequence

>Msa0554710

MRGRQRVASREYLIVHDSKDENPVRVQSAKPCWRRSLRHVIVASISSFLYGYHIGVVNETLESISIDLGFSGDTLAEGLVVSICLGGAFIGSSFSGWIADGVGHRRSFQLCALPMIIGAVMSATSKSLWGMLLGRLFVGTGMGLGPPVAALYVAEVSPPAVRGTYGGLTQIATCLGIMGSLFIGIPAKEIVGWWRICFWVSVIPAAALALFMEICAESPHWLFKKGRTIEAEAEFEKLLGGLHVKPAMSELTKSDRGDESGTMKLSEILFGCHARVMFIGSALFALQQLSGINAVFYFSSATFESFGVSSKIGNTCVGICNLLGSVISMILMDKLGRKVLLLGSFLGMAVTMGLQVIAASSYASGSGAMYLSVGGMLLYVLSFALGAGPVPCLLMSEILPGKIRAKAMAICLAVHWVINFFVGLLFLRMLEQMGAQLLYSIFGSFSLLAVIFVKKYVLETKGKSLQEIEIALLAQEIA*