AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0599030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0599030 MtrunA17_Chr4g0022791 95.925 319 8 4 1 317 1 316 0.0 613
Msa0599030 MtrunA17_Chr2g0323391 68.641 287 63 6 38 310 23 296 2.10e-135 386
Msa0599030 MtrunA17_Chr6g0482961 39.869 306 152 11 1 290 13 302 1.39e-64 207
Msa0599030 MtrunA17_Chr8g0392751 40.000 305 143 9 7 287 14 302 3.42e-63 203
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0599030 AT4G28100.1 64.527 296 88 5 23 317 22 301 2.42e-130 374
Msa0599030 AT3G18050.1 38.906 329 170 9 8 312 11 332 4.12e-67 213

Find 101 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAGGGAGAAAGTGATTT+TGG 0.153709 4_2:-37012414 None:intergenic
TTGTCGTAATGCTTCTTATC+AGG 0.202785 4_2:+37013141 Msa0599030:CDS
TCTGCTGCGTTTAATGTTTC+GGG 0.214488 4_2:+37013061 Msa0599030:CDS
TTCTGCTGCGTTTAATGTTT+CGG 0.218238 4_2:+37013060 Msa0599030:CDS
TAATATAGTAGCCCATAATT+TGG 0.244037 4_2:-37014087 None:intergenic
CATCTTGGCCGTCCAAATTA+TGG 0.245463 4_2:+37014075 Msa0599030:CDS
TTGGGAGAAGATAAAGAAAA+AGG 0.250200 4_2:-37012526 None:intergenic
AGAGGTCGAGTTTGCAGATT+TGG 0.268829 4_2:-37012706 None:intergenic
AATAATTAGTAGTACAAGTT+AGG 0.311806 4_2:+37014476 Msa0599030:three_prime_UTR
GAGTTTGCAGATTTGGGTTT+GGG 0.319085 4_2:-37012699 None:intergenic
CGAGTTTGCAGATTTGGGTT+TGG 0.325136 4_2:-37012700 None:intergenic
TAACAGAGATTGTGAACTAA+TGG 0.333851 4_2:+37013884 Msa0599030:CDS
ATTTGCTCCGGCTCCGTTGT+TGG 0.354401 4_2:-37012849 None:intergenic
GTGGTAGTGTAGTGTTTCTC+TGG 0.356081 4_2:-37012350 None:intergenic
ATTATTTGTGTTGGAGTTGA+AGG 0.357479 4_2:-37012467 None:intergenic
CAACACAGTCCCCGCATTCC+CGG 0.360332 4_2:+37012670 Msa0599030:CDS
AAAAGCCACGCGGCAAGAAC+CGG 0.360533 4_2:-37012794 None:intergenic
AACTGCTGCTGTTCGTAACT+TGG 0.363450 4_2:+37013111 Msa0599030:CDS
GAGAGAGAGATTATTTGTGT+TGG 0.364359 4_2:-37012476 None:intergenic
ATCTTGGCCGTCCAAATTAT+GGG 0.373511 4_2:+37014076 Msa0599030:CDS
TTGGGTTTGAACCGGGAATG+CGG 0.380406 4_2:-37012681 None:intergenic
TGAAGAGTGGGAGGAGAAGA+AGG 0.387786 4_2:-37012595 None:intergenic
TGAAGTGAATCAACGGCTAA+TGG 0.395320 4_2:-37014032 None:intergenic
GAGGTCGAGTTTGCAGATTT+GGG 0.397903 4_2:-37012705 None:intergenic
CTCCCACTCTTCACTCATGC+TGG 0.402065 4_2:+37012605 Msa0599030:CDS
ACTCTCCCAACCAGTCGAAC+CGG 0.404791 4_2:+37012631 Msa0599030:CDS
GACACAAGCATCCAAGAATT+AGG 0.404992 4_2:-37014228 None:intergenic
GAAGGAGTGAGGTGATGAAA+AGG 0.407969 4_2:-37012577 None:intergenic
TGGGTTTGAACCGGGAATGC+GGG 0.408581 4_2:-37012680 None:intergenic
ATCGCATCACACGTTGCATT+AGG 0.409232 4_2:-37012989 None:intergenic
ATTTGGGTTTGGGTTTGAAC+CGG 0.414362 4_2:-37012689 None:intergenic
CACACGTTGCATTAGGTTGT+GGG 0.420086 4_2:-37012982 None:intergenic
AACAGAGATTGTGAACTAAT+GGG 0.422082 4_2:+37013885 Msa0599030:CDS
CATAATTTGGACGGCCAAGA+TGG 0.431678 4_2:-37014074 None:intergenic
TGTCGTAATGCTTCTTATCA+GGG 0.448608 4_2:+37013142 Msa0599030:CDS
TTTCGCCGCCCACGCTCGTT+CGG 0.449306 4_2:+37012814 Msa0599030:CDS
TTGTGTCACGTGAAGAAGTT+AGG 0.449562 4_2:+37014244 Msa0599030:three_prime_UTR
CTCATTATCTGTAATTTACA+AGG 0.453834 4_2:-37014323 None:intergenic
GCTTCGGCTCCATCCTCAAC+AGG 0.455805 4_2:+37012875 Msa0599030:CDS
GCGGGGACTGTGTTGGAGGA+TGG 0.460235 4_2:-37012662 None:intergenic
TCACACGTTGCATTAGGTTG+TGG 0.466248 4_2:-37012983 None:intergenic
GGGTATGAACCCGGTTCGAC+TGG 0.470108 4_2:-37012641 None:intergenic
TGAACCCGGTTCGACTGGTT+GGG 0.474080 4_2:-37012636 None:intergenic
CGGGGACTGTGTTGGAGGAT+GGG 0.475483 4_2:-37012661 None:intergenic
CGGGAATGCGGGGACTGTGT+TGG 0.482579 4_2:-37012669 None:intergenic
GATTCACTTCAATTTGAAAG+TGG 0.489122 4_2:+37014044 Msa0599030:CDS
ATGAACCCGGTTCGACTGGT+TGG 0.492512 4_2:-37012637 None:intergenic
AAAGTGGTCATGCTCCATCT+TGG 0.495611 4_2:+37014060 Msa0599030:CDS
AGCCGAAGCATTATTTGCTC+CGG 0.496721 4_2:-37012861 None:intergenic
ACTCATAAGTGAGTCTTGTA+AGG 0.496885 4_2:-37012945 None:intergenic
CGGAAGTTGTTCTCCTGTTG+AGG 0.498858 4_2:-37012888 None:intergenic
ATGTCTCTCTGCCCTACAAA+AGG 0.500405 4_2:+37013174 Msa0599030:CDS
TGCACGTAGAACTGCTGAAA+CGG 0.501145 4_2:-37013952 None:intergenic
GAATGCGGGGACTGTGTTGG+AGG 0.503728 4_2:-37012666 None:intergenic
AGTTGTTCTCCTGTTGAGGA+TGG 0.504796 4_2:-37012884 None:intergenic
TAATTAATAACAATTAAAGA+TGG 0.508087 4_2:-37014451 None:intergenic
AGCCGGAGCAAATAATGCTT+CGG 0.512369 4_2:+37012859 Msa0599030:CDS
TGTGTTGGAGTTGAAGGAGA+TGG 0.517085 4_2:-37012461 None:intergenic
GACCTCTCCAACGAGCTCTT+CGG 0.518170 4_2:+37012722 Msa0599030:CDS
TTTGGGTTTGGGTTTGAACC+GGG 0.520446 4_2:-37012688 None:intergenic
AGACCGCAGTCGTTGCTGTC+CGG 0.520782 4_2:+37012775 Msa0599030:CDS
GTTCTGAAAAGCAGAGAAGA+AGG 0.521030 4_2:-37012372 None:intergenic
CTCTCCCAACCAGTCGAACC+GGG 0.523232 4_2:+37012632 Msa0599030:CDS
AGTTACAAGAACGCTACAAA+GGG 0.523687 4_2:+37013834 Msa0599030:CDS
GACAGCAACGACTGCGGTCT+AGG 0.524595 4_2:-37012772 None:intergenic
TTCAAATTGAAGTGAATCAA+CGG 0.545392 4_2:-37014039 None:intergenic
TGTGAGTCATCAGGCATCAT+CGG 0.545671 4_2:-37012908 None:intergenic
GAGTTGAAGGAGATGGTGAT+GGG 0.545687 4_2:-37012454 None:intergenic
TTTCAAGAGCCGAACGAGCG+TGG 0.546135 4_2:-37012823 None:intergenic
AACCAGCATGAGTGAAGAGT+GGG 0.547261 4_2:-37012607 None:intergenic
TGGGAGGAGAAGAAGGAGTG+AGG 0.550690 4_2:-37012588 None:intergenic
GGAGTTGAAGGAGATGGTGA+TGG 0.551180 4_2:-37012455 None:intergenic
GAAATAACCAACAACGGAGC+CGG 0.555507 4_2:+37012842 Msa0599030:CDS
AAGTTACGAACAGCAGCAGT+TGG 0.556978 4_2:-37013109 None:intergenic
GGGTTTGAACCGGGAATGCG+GGG 0.558028 4_2:-37012679 None:intergenic
GGACTACACTTTGATTCATG+TGG 0.560071 4_2:-37013993 None:intergenic
AAGAGCCGAACGAGCGTGGG+CGG 0.577665 4_2:-37012819 None:intergenic
AATTAGGCCAAAAGAGAAGA+GGG 0.579095 4_2:-37014212 None:intergenic
ACGTAGAACTGCTGAAACGG+TGG 0.579762 4_2:-37013949 None:intergenic
TTCAAGAGCCGAACGAGCGT+GGG 0.580602 4_2:-37012822 None:intergenic
CGCCGAAGAGCTCGTTGGAG+AGG 0.584739 4_2:-37012724 None:intergenic
CAGCATGAGTGAAGAGTGGG+AGG 0.590904 4_2:-37012604 None:intergenic
GACTACACTTTGATTCATGT+GGG 0.591239 4_2:-37013992 None:intergenic
GAGTTACAAGAACGCTACAA+AGG 0.601620 4_2:+37013833 Msa0599030:CDS
TTGAAGGAGATGGTGATGGG+TGG 0.603760 4_2:-37012451 None:intergenic
AAACCAGCATGAGTGAAGAG+TGG 0.605772 4_2:-37012608 None:intergenic
TACGCCGCCGAAGAGCTCGT+TGG 0.611881 4_2:-37012729 None:intergenic
GAATTAGGCCAAAAGAGAAG+AGG 0.613602 4_2:-37014213 None:intergenic
ATAGTAGCCCATAATTTGGA+CGG 0.616883 4_2:-37014083 None:intergenic
GTGAACTAATGGGTTTAACA+TGG 0.617355 4_2:+37013895 Msa0599030:CDS
ACGTGAAGAAGTTAGGCTAG+TGG 0.621245 4_2:+37014251 Msa0599030:three_prime_UTR
GGCGGCGTAAAAGCCGCTTG+CGG 0.629108 4_2:+37012743 Msa0599030:CDS
CGTAGAACTGCTGAAACGGT+GGG 0.636801 4_2:-37013948 None:intergenic
GCTGTCCGGTTCTTGCCGCG+TGG 0.638492 4_2:+37012789 Msa0599030:CDS
CTCTCCAACGAGCTCTTCGG+CGG 0.652599 4_2:+37012725 Msa0599030:CDS
CTAGTGGACAAAATCAGCAG+TGG 0.656842 4_2:+37014267 Msa0599030:three_prime_UTR
TTGGAGGATGGGTATGAACC+CGG 0.664144 4_2:-37012650 None:intergenic
GCTCTTGAAATAACCAACAA+CGG 0.676998 4_2:+37012836 Msa0599030:CDS
CTGAAAAGCAGAGAAGAAGG+TGG 0.686837 4_2:-37012369 None:intergenic
GAACCGGACAGCAACGACTG+CGG 0.698885 4_2:-37012778 None:intergenic
GTGGGCGGCGAAAAGCCACG+CGG 0.715002 4_2:-37012804 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAATTATCATTAACT+TGG + chr4_2:37013213-37013232 Msa0599030:intron 10.0%
!!! ATTTTACAATTAGAAATAAA+GGG - chr4_2:37013561-37013580 None:intergenic 10.0%
!!! AATTTTACAATTAGAAATAA+AGG - chr4_2:37013562-37013581 None:intergenic 10.0%
!! GTTAATTTATTTATTTATAC+AGG + chr4_2:37013806-37013825 Msa0599030:intron 10.0%
!! TAATTAATAACAATTAAAGA+TGG - chr4_2:37014454-37014473 None:intergenic 10.0%
!! TTAAAAAATTATCATTAACT+TGG + chr4_2:37013213-37013232 Msa0599030:intron 10.0%
!!! ATTTTACAATTAGAAATAAA+GGG - chr4_2:37013561-37013580 None:intergenic 10.0%
!!! AATTTTACAATTAGAAATAA+AGG - chr4_2:37013562-37013581 None:intergenic 10.0%
!! GTTAATTTATTTATTTATAC+AGG + chr4_2:37013806-37013825 Msa0599030:intron 10.0%
!! TAATTAATAACAATTAAAGA+TGG - chr4_2:37014454-37014473 None:intergenic 10.0%
!! AAAACTAAACTAATAGAAAT+GGG - chr4_2:37013280-37013299 None:intergenic 15.0%
!! AAAAACTAAACTAATAGAAA+TGG - chr4_2:37013281-37013300 None:intergenic 15.0%
!!! TTCTATTAGTTTAGTTTTTT+TGG + chr4_2:37013282-37013301 Msa0599030:intron 15.0%
!!! TCTATTAGTTTAGTTTTTTT+GGG + chr4_2:37013283-37013302 Msa0599030:intron 15.0%
!!! TGTAATCTTTGTTATTTTTT+TGG + chr4_2:37013326-37013345 Msa0599030:intron 15.0%
!!! GTAATCTTTGTTATTTTTTT+GGG + chr4_2:37013327-37013346 Msa0599030:intron 15.0%
!! AAGAAAAAATGAATAGAAAT+AGG + chr4_2:37013447-37013466 Msa0599030:intron 15.0%
!!! ACATTTTTTTGTTTTATGTT+TGG + chr4_2:37013474-37013493 Msa0599030:intron 15.0%
!! ATTGTAAAATTAGAACTATA+AGG + chr4_2:37013571-37013590 Msa0599030:intron 15.0%
!! TTGTAAAATTAGAACTATAA+GGG + chr4_2:37013572-37013591 Msa0599030:intron 15.0%
!!! TTTTGTTCTTTTGTTTAAAA+AGG + chr4_2:37014125-37014144 Msa0599030:exon 15.0%
!! ATAGAAAAAACAAAAATTGT+AGG + chr4_2:37014391-37014410 Msa0599030:three_prime_UTR 15.0%
!! AAAACTAAACTAATAGAAAT+GGG - chr4_2:37013280-37013299 None:intergenic 15.0%
!! AAAAACTAAACTAATAGAAA+TGG - chr4_2:37013281-37013300 None:intergenic 15.0%
!!! TTCTATTAGTTTAGTTTTTT+TGG + chr4_2:37013282-37013301 Msa0599030:intron 15.0%
!!! TCTATTAGTTTAGTTTTTTT+GGG + chr4_2:37013283-37013302 Msa0599030:intron 15.0%
!!! TGTAATCTTTGTTATTTTTT+TGG + chr4_2:37013326-37013345 Msa0599030:intron 15.0%
!!! GTAATCTTTGTTATTTTTTT+GGG + chr4_2:37013327-37013346 Msa0599030:intron 15.0%
!! AAGAAAAAATGAATAGAAAT+AGG + chr4_2:37013447-37013466 Msa0599030:intron 15.0%
!!! ACATTTTTTTGTTTTATGTT+TGG + chr4_2:37013474-37013493 Msa0599030:intron 15.0%
!! ATTGTAAAATTAGAACTATA+AGG + chr4_2:37013571-37013590 Msa0599030:intron 15.0%
!! TTGTAAAATTAGAACTATAA+GGG + chr4_2:37013572-37013591 Msa0599030:intron 15.0%
!!! TTTTGTTCTTTTGTTTAAAA+AGG + chr4_2:37014125-37014144 Msa0599030:exon 15.0%
!! ATAGAAAAAACAAAAATTGT+AGG + chr4_2:37014391-37014410 Msa0599030:three_prime_UTR 15.0%
!!! ATGATTGCATTTTGATTTTT+GGG - chr4_2:37012547-37012566 None:intergenic 20.0%
!!! AATGATTGCATTTTGATTTT+TGG - chr4_2:37012548-37012567 None:intergenic 20.0%
!!! TATTTGTTGTGTTTATTTTG+TGG + chr4_2:37013240-37013259 Msa0599030:intron 20.0%
!!! ATTTGTTGTGTTTATTTTGT+GGG + chr4_2:37013241-37013260 Msa0599030:intron 20.0%
!! AAACTAAACTAATAGAAATG+GGG - chr4_2:37013279-37013298 None:intergenic 20.0%
!! AAGAAATGAAAAATTTGATG+TGG - chr4_2:37013605-37013624 None:intergenic 20.0%
!!! AACTGTTTAGTTGAATTTTT+TGG + chr4_2:37014153-37014172 Msa0599030:three_prime_UTR 20.0%
!!! ACTGTTTAGTTGAATTTTTT+GGG + chr4_2:37014154-37014173 Msa0599030:three_prime_UTR 20.0%
!!! TTTTTTCTATCTAAAATGTG+AGG - chr4_2:37014381-37014400 None:intergenic 20.0%
!! AATAATTAGTAGTACAAGTT+AGG + chr4_2:37014476-37014495 Msa0599030:three_prime_UTR 20.0%
!!! ATGATTGCATTTTGATTTTT+GGG - chr4_2:37012547-37012566 None:intergenic 20.0%
!!! AATGATTGCATTTTGATTTT+TGG - chr4_2:37012548-37012567 None:intergenic 20.0%
!!! TATTTGTTGTGTTTATTTTG+TGG + chr4_2:37013240-37013259 Msa0599030:intron 20.0%
!!! ATTTGTTGTGTTTATTTTGT+GGG + chr4_2:37013241-37013260 Msa0599030:intron 20.0%
!! AAACTAAACTAATAGAAATG+GGG - chr4_2:37013279-37013298 None:intergenic 20.0%
!! AAGAAATGAAAAATTTGATG+TGG - chr4_2:37013605-37013624 None:intergenic 20.0%
!!! AACTGTTTAGTTGAATTTTT+TGG + chr4_2:37014153-37014172 Msa0599030:three_prime_UTR 20.0%
!!! ACTGTTTAGTTGAATTTTTT+GGG + chr4_2:37014154-37014173 Msa0599030:three_prime_UTR 20.0%
!!! TTTTTTCTATCTAAAATGTG+AGG - chr4_2:37014381-37014400 None:intergenic 20.0%
!! AATAATTAGTAGTACAAGTT+AGG + chr4_2:37014476-37014495 Msa0599030:three_prime_UTR 20.0%
!!! TGGGTTTTGTTGAAAATTAT+AGG - chr4_2:37012397-37012416 None:intergenic 25.0%
! AGATAAAGAAAAAGGAAAAG+TGG - chr4_2:37012521-37012540 None:intergenic 25.0%
!!! TTCTTTGTTTTTGTGGTATT+AGG + chr4_2:37013011-37013030 Msa0599030:CDS 25.0%
!! AAAGTAAAGAACCTTTTGTA+GGG - chr4_2:37013188-37013207 None:intergenic 25.0%
!! AAAAGTAAAGAACCTTTTGT+AGG - chr4_2:37013189-37013208 None:intergenic 25.0%
!!! TGTTATTTTTTTGGGTGAAA+TGG + chr4_2:37013335-37013354 Msa0599030:intron 25.0%
!!! TTTGTTTTATGTTTGGAACT+TGG + chr4_2:37013481-37013500 Msa0599030:intron 25.0%
! AATTAGAACTATAAGGGAAA+AGG + chr4_2:37013578-37013597 Msa0599030:intron 25.0%
! ATGAAAAAGGTTGTCATAAT+TGG - chr4_2:37013688-37013707 None:intergenic 25.0%
! GAATATTCAATAACATGACA+TGG + chr4_2:37013784-37013803 Msa0599030:intron 25.0%
! TTCAAATTGAAGTGAATCAA+CGG - chr4_2:37014042-37014061 None:intergenic 25.0%
! TAATATAGTAGCCCATAATT+TGG - chr4_2:37014090-37014109 None:intergenic 25.0%
! CTCATTATCTGTAATTTACA+AGG - chr4_2:37014326-37014345 None:intergenic 25.0%
!! CAAAAATTGTAGGCTTTTAT+CGG + chr4_2:37014401-37014420 Msa0599030:three_prime_UTR 25.0%
!!! TGGGTTTTGTTGAAAATTAT+AGG - chr4_2:37012397-37012416 None:intergenic 25.0%
! AGATAAAGAAAAAGGAAAAG+TGG - chr4_2:37012521-37012540 None:intergenic 25.0%
!!! TTCTTTGTTTTTGTGGTATT+AGG + chr4_2:37013011-37013030 Msa0599030:CDS 25.0%
!! AAAGTAAAGAACCTTTTGTA+GGG - chr4_2:37013188-37013207 None:intergenic 25.0%
!! AAAAGTAAAGAACCTTTTGT+AGG - chr4_2:37013189-37013208 None:intergenic 25.0%
!!! TGTTATTTTTTTGGGTGAAA+TGG + chr4_2:37013335-37013354 Msa0599030:intron 25.0%
!!! TTTGTTTTATGTTTGGAACT+TGG + chr4_2:37013481-37013500 Msa0599030:intron 25.0%
! AATTAGAACTATAAGGGAAA+AGG + chr4_2:37013578-37013597 Msa0599030:intron 25.0%
! ATGAAAAAGGTTGTCATAAT+TGG - chr4_2:37013688-37013707 None:intergenic 25.0%
! GAATATTCAATAACATGACA+TGG + chr4_2:37013784-37013803 Msa0599030:intron 25.0%
! TTCAAATTGAAGTGAATCAA+CGG - chr4_2:37014042-37014061 None:intergenic 25.0%
! TAATATAGTAGCCCATAATT+TGG - chr4_2:37014090-37014109 None:intergenic 25.0%
! CTCATTATCTGTAATTTACA+AGG - chr4_2:37014326-37014345 None:intergenic 25.0%
!! CAAAAATTGTAGGCTTTTAT+CGG + chr4_2:37014401-37014420 Msa0599030:three_prime_UTR 25.0%
! GAAAAAGATGAGCTTTTTGA+GGG - chr4_2:37012432-37012451 None:intergenic 30.0%
ATTATTTGTGTTGGAGTTGA+AGG - chr4_2:37012470-37012489 None:intergenic 30.0%
TTGGGAGAAGATAAAGAAAA+AGG - chr4_2:37012529-37012548 None:intergenic 30.0%
TAACAGAGATTGTGAACTAA+TGG + chr4_2:37013884-37013903 Msa0599030:CDS 30.0%
AACAGAGATTGTGAACTAAT+GGG + chr4_2:37013885-37013904 Msa0599030:CDS 30.0%
GATTCACTTCAATTTGAAAG+TGG + chr4_2:37014044-37014063 Msa0599030:CDS 30.0%
! GTGTTTTTCATTTTCATGAG+TGG + chr4_2:37014514-37014533 Msa0599030:three_prime_UTR 30.0%
! GAAAAAGATGAGCTTTTTGA+GGG - chr4_2:37012432-37012451 None:intergenic 30.0%
ATTATTTGTGTTGGAGTTGA+AGG - chr4_2:37012470-37012489 None:intergenic 30.0%
TTGGGAGAAGATAAAGAAAA+AGG - chr4_2:37012529-37012548 None:intergenic 30.0%
TAACAGAGATTGTGAACTAA+TGG + chr4_2:37013884-37013903 Msa0599030:CDS 30.0%
AACAGAGATTGTGAACTAAT+GGG + chr4_2:37013885-37013904 Msa0599030:CDS 30.0%
GATTCACTTCAATTTGAAAG+TGG + chr4_2:37014044-37014063 Msa0599030:CDS 30.0%
! GTGTTTTTCATTTTCATGAG+TGG + chr4_2:37014514-37014533 Msa0599030:three_prime_UTR 30.0%
! TTGAGGGAGAAAGTGATTTT+GGG - chr4_2:37012416-37012435 None:intergenic 35.0%
! TTTGAGGGAGAAAGTGATTT+TGG - chr4_2:37012417-37012436 None:intergenic 35.0%
! GGAAAAAGATGAGCTTTTTG+AGG - chr4_2:37012433-37012452 None:intergenic 35.0%
GAGAGAGAGATTATTTGTGT+TGG - chr4_2:37012479-37012498 None:intergenic 35.0%
GCTCTTGAAATAACCAACAA+CGG + chr4_2:37012836-37012855 Msa0599030:CDS 35.0%
! ACTCATAAGTGAGTCTTGTA+AGG - chr4_2:37012948-37012967 None:intergenic 35.0%
!!! GATGCGATTCTTTGTTTTTG+TGG + chr4_2:37013004-37013023 Msa0599030:CDS 35.0%
TTCTGCTGCGTTTAATGTTT+CGG + chr4_2:37013060-37013079 Msa0599030:CDS 35.0%
TTGTCGTAATGCTTCTTATC+AGG + chr4_2:37013141-37013160 Msa0599030:CDS 35.0%
TGTCGTAATGCTTCTTATCA+GGG + chr4_2:37013142-37013161 Msa0599030:CDS 35.0%
! GGGTGAAATGGAATTTTGTT+TGG + chr4_2:37013347-37013366 Msa0599030:intron 35.0%
TTTCATTGTGCAAGGTTCAA+AGG - chr4_2:37013526-37013545 None:intergenic 35.0%
CTCAAAAGTTTCATTGTGCA+AGG - chr4_2:37013534-37013553 None:intergenic 35.0%
TCATAATTGGCAAACTCATG+TGG - chr4_2:37013675-37013694 None:intergenic 35.0%
AGTTACAAGAACGCTACAAA+GGG + chr4_2:37013834-37013853 Msa0599030:CDS 35.0%
!! GTGAACTAATGGGTTTAACA+TGG + chr4_2:37013895-37013914 Msa0599030:CDS 35.0%
GACTACACTTTGATTCATGT+GGG - chr4_2:37013995-37014014 None:intergenic 35.0%
! AATGGCATGTTTTCTTGATC+AGG - chr4_2:37014017-37014036 None:intergenic 35.0%
ATAGTAGCCCATAATTTGGA+CGG - chr4_2:37014086-37014105 None:intergenic 35.0%
AAAAAAGAGAGAGAAGAGGA+TGG - chr4_2:37014189-37014208 None:intergenic 35.0%
GACAAAAAAAGAGAGAGAAG+AGG - chr4_2:37014193-37014212 None:intergenic 35.0%
! TTTTTGTCCCTCTTCTCTTT+TGG + chr4_2:37014205-37014224 Msa0599030:three_prime_UTR 35.0%
AATTAGGCCAAAAGAGAAGA+GGG - chr4_2:37014215-37014234 None:intergenic 35.0%
! TTCTCTTTTGGCCTAATTCT+TGG + chr4_2:37014217-37014236 Msa0599030:three_prime_UTR 35.0%
! GGAAGATGTTTTGTAACAAG+AGG + chr4_2:37014288-37014307 Msa0599030:three_prime_UTR 35.0%
! TTGAGGGAGAAAGTGATTTT+GGG - chr4_2:37012416-37012435 None:intergenic 35.0%
! TTTGAGGGAGAAAGTGATTT+TGG - chr4_2:37012417-37012436 None:intergenic 35.0%
! GGAAAAAGATGAGCTTTTTG+AGG - chr4_2:37012433-37012452 None:intergenic 35.0%
GAGAGAGAGATTATTTGTGT+TGG - chr4_2:37012479-37012498 None:intergenic 35.0%
GCTCTTGAAATAACCAACAA+CGG + chr4_2:37012836-37012855 Msa0599030:CDS 35.0%
! ACTCATAAGTGAGTCTTGTA+AGG - chr4_2:37012948-37012967 None:intergenic 35.0%
!!! GATGCGATTCTTTGTTTTTG+TGG + chr4_2:37013004-37013023 Msa0599030:CDS 35.0%
TTCTGCTGCGTTTAATGTTT+CGG + chr4_2:37013060-37013079 Msa0599030:CDS 35.0%
TTGTCGTAATGCTTCTTATC+AGG + chr4_2:37013141-37013160 Msa0599030:CDS 35.0%
TGTCGTAATGCTTCTTATCA+GGG + chr4_2:37013142-37013161 Msa0599030:CDS 35.0%
! GGGTGAAATGGAATTTTGTT+TGG + chr4_2:37013347-37013366 Msa0599030:intron 35.0%
TTTCATTGTGCAAGGTTCAA+AGG - chr4_2:37013526-37013545 None:intergenic 35.0%
CTCAAAAGTTTCATTGTGCA+AGG - chr4_2:37013534-37013553 None:intergenic 35.0%
TCATAATTGGCAAACTCATG+TGG - chr4_2:37013675-37013694 None:intergenic 35.0%
AGTTACAAGAACGCTACAAA+GGG + chr4_2:37013834-37013853 Msa0599030:CDS 35.0%
!! GTGAACTAATGGGTTTAACA+TGG + chr4_2:37013895-37013914 Msa0599030:CDS 35.0%
GACTACACTTTGATTCATGT+GGG - chr4_2:37013995-37014014 None:intergenic 35.0%
! AATGGCATGTTTTCTTGATC+AGG - chr4_2:37014017-37014036 None:intergenic 35.0%
ATAGTAGCCCATAATTTGGA+CGG - chr4_2:37014086-37014105 None:intergenic 35.0%
AAAAAAGAGAGAGAAGAGGA+TGG - chr4_2:37014189-37014208 None:intergenic 35.0%
GACAAAAAAAGAGAGAGAAG+AGG - chr4_2:37014193-37014212 None:intergenic 35.0%
! TTTTTGTCCCTCTTCTCTTT+TGG + chr4_2:37014205-37014224 Msa0599030:three_prime_UTR 35.0%
AATTAGGCCAAAAGAGAAGA+GGG - chr4_2:37014215-37014234 None:intergenic 35.0%
! TTCTCTTTTGGCCTAATTCT+TGG + chr4_2:37014217-37014236 Msa0599030:three_prime_UTR 35.0%
! GGAAGATGTTTTGTAACAAG+AGG + chr4_2:37014288-37014307 Msa0599030:three_prime_UTR 35.0%
!! GTTCTGAAAAGCAGAGAAGA+AGG - chr4_2:37012375-37012394 None:intergenic 40.0%
! ATTTGGGTTTGGGTTTGAAC+CGG - chr4_2:37012692-37012711 None:intergenic 40.0%
! GAGTTTGCAGATTTGGGTTT+GGG - chr4_2:37012702-37012721 None:intergenic 40.0%
! ACGCATTTTTGTGAGTCATC+AGG - chr4_2:37012920-37012939 None:intergenic 40.0%
TCTGCTGCGTTTAATGTTTC+GGG + chr4_2:37013061-37013080 Msa0599030:CDS 40.0%
GAGTTACAAGAACGCTACAA+AGG + chr4_2:37013833-37013852 Msa0599030:CDS 40.0%
GGACTACACTTTGATTCATG+TGG - chr4_2:37013996-37014015 None:intergenic 40.0%
TGAAGTGAATCAACGGCTAA+TGG - chr4_2:37014035-37014054 None:intergenic 40.0%
ATCTTGGCCGTCCAAATTAT+GGG + chr4_2:37014076-37014095 Msa0599030:CDS 40.0%
GAATTAGGCCAAAAGAGAAG+AGG - chr4_2:37014216-37014235 None:intergenic 40.0%
GACACAAGCATCCAAGAATT+AGG - chr4_2:37014231-37014250 None:intergenic 40.0%
TTGTGTCACGTGAAGAAGTT+AGG + chr4_2:37014244-37014263 Msa0599030:three_prime_UTR 40.0%
!! GTTCTGAAAAGCAGAGAAGA+AGG - chr4_2:37012375-37012394 None:intergenic 40.0%
! ATTTGGGTTTGGGTTTGAAC+CGG - chr4_2:37012692-37012711 None:intergenic 40.0%
! GAGTTTGCAGATTTGGGTTT+GGG - chr4_2:37012702-37012721 None:intergenic 40.0%
! ACGCATTTTTGTGAGTCATC+AGG - chr4_2:37012920-37012939 None:intergenic 40.0%
TCTGCTGCGTTTAATGTTTC+GGG + chr4_2:37013061-37013080 Msa0599030:CDS 40.0%
GAGTTACAAGAACGCTACAA+AGG + chr4_2:37013833-37013852 Msa0599030:CDS 40.0%
GGACTACACTTTGATTCATG+TGG - chr4_2:37013996-37014015 None:intergenic 40.0%
TGAAGTGAATCAACGGCTAA+TGG - chr4_2:37014035-37014054 None:intergenic 40.0%
ATCTTGGCCGTCCAAATTAT+GGG + chr4_2:37014076-37014095 Msa0599030:CDS 40.0%
GAATTAGGCCAAAAGAGAAG+AGG - chr4_2:37014216-37014235 None:intergenic 40.0%
GACACAAGCATCCAAGAATT+AGG - chr4_2:37014231-37014250 None:intergenic 40.0%
TTGTGTCACGTGAAGAAGTT+AGG + chr4_2:37014244-37014263 Msa0599030:three_prime_UTR 40.0%
! GTGGTAGTGTAGTGTTTCTC+TGG - chr4_2:37012353-37012372 None:intergenic 45.0%
CTGAAAAGCAGAGAAGAAGG+TGG - chr4_2:37012372-37012391 None:intergenic 45.0%
GAGTTGAAGGAGATGGTGAT+GGG - chr4_2:37012457-37012476 None:intergenic 45.0%
TGTGTTGGAGTTGAAGGAGA+TGG - chr4_2:37012464-37012483 None:intergenic 45.0%
GAAGGAGTGAGGTGATGAAA+AGG - chr4_2:37012580-37012599 None:intergenic 45.0%
AACCAGCATGAGTGAAGAGT+GGG - chr4_2:37012610-37012629 None:intergenic 45.0%
AAACCAGCATGAGTGAAGAG+TGG - chr4_2:37012611-37012630 None:intergenic 45.0%
! TTTGGGTTTGGGTTTGAACC+GGG - chr4_2:37012691-37012710 None:intergenic 45.0%
! CGAGTTTGCAGATTTGGGTT+TGG - chr4_2:37012703-37012722 None:intergenic 45.0%
GAGGTCGAGTTTGCAGATTT+GGG - chr4_2:37012708-37012727 None:intergenic 45.0%
AGAGGTCGAGTTTGCAGATT+TGG - chr4_2:37012709-37012728 None:intergenic 45.0%
GAAATAACCAACAACGGAGC+CGG + chr4_2:37012842-37012861 Msa0599030:CDS 45.0%
AGCCGGAGCAAATAATGCTT+CGG + chr4_2:37012859-37012878 Msa0599030:CDS 45.0%
! AGCCGAAGCATTATTTGCTC+CGG - chr4_2:37012864-37012883 None:intergenic 45.0%
AGTTGTTCTCCTGTTGAGGA+TGG - chr4_2:37012887-37012906 None:intergenic 45.0%
TGTGAGTCATCAGGCATCAT+CGG - chr4_2:37012911-37012930 None:intergenic 45.0%
! CACACGTTGCATTAGGTTGT+GGG - chr4_2:37012985-37013004 None:intergenic 45.0%
! TCACACGTTGCATTAGGTTG+TGG - chr4_2:37012986-37013005 None:intergenic 45.0%
ATCGCATCACACGTTGCATT+AGG - chr4_2:37012992-37013011 None:intergenic 45.0%
AAGTTACGAACAGCAGCAGT+TGG - chr4_2:37013112-37013131 None:intergenic 45.0%
AACTGCTGCTGTTCGTAACT+TGG + chr4_2:37013111-37013130 Msa0599030:CDS 45.0%
ATGTCTCTCTGCCCTACAAA+AGG + chr4_2:37013174-37013193 Msa0599030:CDS 45.0%
TGTGCAAGGTTCAAAGGTCT+TGG - chr4_2:37013520-37013539 None:intergenic 45.0%
TGCACGTAGAACTGCTGAAA+CGG - chr4_2:37013955-37013974 None:intergenic 45.0%
AAAGTGGTCATGCTCCATCT+TGG + chr4_2:37014060-37014079 Msa0599030:CDS 45.0%
CATAATTTGGACGGCCAAGA+TGG - chr4_2:37014077-37014096 None:intergenic 45.0%
CATCTTGGCCGTCCAAATTA+TGG + chr4_2:37014075-37014094 Msa0599030:CDS 45.0%
ACGTGAAGAAGTTAGGCTAG+TGG + chr4_2:37014251-37014270 Msa0599030:three_prime_UTR 45.0%
! CTAGTGGACAAAATCAGCAG+TGG + chr4_2:37014267-37014286 Msa0599030:three_prime_UTR 45.0%
! GTGGTAGTGTAGTGTTTCTC+TGG - chr4_2:37012353-37012372 None:intergenic 45.0%
CTGAAAAGCAGAGAAGAAGG+TGG - chr4_2:37012372-37012391 None:intergenic 45.0%
GAGTTGAAGGAGATGGTGAT+GGG - chr4_2:37012457-37012476 None:intergenic 45.0%
TGTGTTGGAGTTGAAGGAGA+TGG - chr4_2:37012464-37012483 None:intergenic 45.0%
GAAGGAGTGAGGTGATGAAA+AGG - chr4_2:37012580-37012599 None:intergenic 45.0%
AACCAGCATGAGTGAAGAGT+GGG - chr4_2:37012610-37012629 None:intergenic 45.0%
AAACCAGCATGAGTGAAGAG+TGG - chr4_2:37012611-37012630 None:intergenic 45.0%
! TTTGGGTTTGGGTTTGAACC+GGG - chr4_2:37012691-37012710 None:intergenic 45.0%
! CGAGTTTGCAGATTTGGGTT+TGG - chr4_2:37012703-37012722 None:intergenic 45.0%
GAGGTCGAGTTTGCAGATTT+GGG - chr4_2:37012708-37012727 None:intergenic 45.0%
AGAGGTCGAGTTTGCAGATT+TGG - chr4_2:37012709-37012728 None:intergenic 45.0%
GAAATAACCAACAACGGAGC+CGG + chr4_2:37012842-37012861 Msa0599030:CDS 45.0%
AGCCGGAGCAAATAATGCTT+CGG + chr4_2:37012859-37012878 Msa0599030:CDS 45.0%
! AGCCGAAGCATTATTTGCTC+CGG - chr4_2:37012864-37012883 None:intergenic 45.0%
AGTTGTTCTCCTGTTGAGGA+TGG - chr4_2:37012887-37012906 None:intergenic 45.0%
TGTGAGTCATCAGGCATCAT+CGG - chr4_2:37012911-37012930 None:intergenic 45.0%
! CACACGTTGCATTAGGTTGT+GGG - chr4_2:37012985-37013004 None:intergenic 45.0%
! TCACACGTTGCATTAGGTTG+TGG - chr4_2:37012986-37013005 None:intergenic 45.0%
ATCGCATCACACGTTGCATT+AGG - chr4_2:37012992-37013011 None:intergenic 45.0%
AAGTTACGAACAGCAGCAGT+TGG - chr4_2:37013112-37013131 None:intergenic 45.0%
AACTGCTGCTGTTCGTAACT+TGG + chr4_2:37013111-37013130 Msa0599030:CDS 45.0%
ATGTCTCTCTGCCCTACAAA+AGG + chr4_2:37013174-37013193 Msa0599030:CDS 45.0%
TGTGCAAGGTTCAAAGGTCT+TGG - chr4_2:37013520-37013539 None:intergenic 45.0%
TGCACGTAGAACTGCTGAAA+CGG - chr4_2:37013955-37013974 None:intergenic 45.0%
AAAGTGGTCATGCTCCATCT+TGG + chr4_2:37014060-37014079 Msa0599030:CDS 45.0%
CATAATTTGGACGGCCAAGA+TGG - chr4_2:37014077-37014096 None:intergenic 45.0%
CATCTTGGCCGTCCAAATTA+TGG + chr4_2:37014075-37014094 Msa0599030:CDS 45.0%
ACGTGAAGAAGTTAGGCTAG+TGG + chr4_2:37014251-37014270 Msa0599030:three_prime_UTR 45.0%
! CTAGTGGACAAAATCAGCAG+TGG + chr4_2:37014267-37014286 Msa0599030:three_prime_UTR 45.0%
!! AATTATTAAAAATATGAAAA+AGG - chr4_2:37013701-37013720 None:intergenic 5.0%
!! AATTATTAAAAATATGAAAA+AGG - chr4_2:37013701-37013720 None:intergenic 5.0%
!! TTGAAGGAGATGGTGATGGG+TGG - chr4_2:37012454-37012473 None:intergenic 50.0%
GGAGTTGAAGGAGATGGTGA+TGG - chr4_2:37012458-37012477 None:intergenic 50.0%
TGAAGAGTGGGAGGAGAAGA+AGG - chr4_2:37012598-37012617 None:intergenic 50.0%
TTGGAGGATGGGTATGAACC+CGG - chr4_2:37012653-37012672 None:intergenic 50.0%
TTGGGTTTGAACCGGGAATG+CGG - chr4_2:37012684-37012703 None:intergenic 50.0%
! GTCTAGGTTTTTGCCGCAAG+CGG - chr4_2:37012759-37012778 None:intergenic 50.0%
CGGAAGTTGTTCTCCTGTTG+AGG - chr4_2:37012891-37012910 None:intergenic 50.0%
CGTAGAACTGCTGAAACGGT+GGG - chr4_2:37013951-37013970 None:intergenic 50.0%
ACGTAGAACTGCTGAAACGG+TGG - chr4_2:37013952-37013971 None:intergenic 50.0%
!! TTGAAGGAGATGGTGATGGG+TGG - chr4_2:37012454-37012473 None:intergenic 50.0%
GGAGTTGAAGGAGATGGTGA+TGG - chr4_2:37012458-37012477 None:intergenic 50.0%
TGAAGAGTGGGAGGAGAAGA+AGG - chr4_2:37012598-37012617 None:intergenic 50.0%
TTGGAGGATGGGTATGAACC+CGG - chr4_2:37012653-37012672 None:intergenic 50.0%
TTGGGTTTGAACCGGGAATG+CGG - chr4_2:37012684-37012703 None:intergenic 50.0%
! GTCTAGGTTTTTGCCGCAAG+CGG - chr4_2:37012759-37012778 None:intergenic 50.0%
CGGAAGTTGTTCTCCTGTTG+AGG - chr4_2:37012891-37012910 None:intergenic 50.0%
CGTAGAACTGCTGAAACGGT+GGG - chr4_2:37013951-37013970 None:intergenic 50.0%
ACGTAGAACTGCTGAAACGG+TGG - chr4_2:37013952-37013971 None:intergenic 50.0%
TGGGAGGAGAAGAAGGAGTG+AGG - chr4_2:37012591-37012610 None:intergenic 55.0%
CAGCATGAGTGAAGAGTGGG+AGG - chr4_2:37012607-37012626 None:intergenic 55.0%
CTCCCACTCTTCACTCATGC+TGG + chr4_2:37012605-37012624 Msa0599030:CDS 55.0%
ACTCTCCCAACCAGTCGAAC+CGG + chr4_2:37012631-37012650 Msa0599030:CDS 55.0%
! TGAACCCGGTTCGACTGGTT+GGG - chr4_2:37012639-37012658 None:intergenic 55.0%
! ATGAACCCGGTTCGACTGGT+TGG - chr4_2:37012640-37012659 None:intergenic 55.0%
TGGGTTTGAACCGGGAATGC+GGG - chr4_2:37012683-37012702 None:intergenic 55.0%
GACCTCTCCAACGAGCTCTT+CGG + chr4_2:37012722-37012741 Msa0599030:CDS 55.0%
AAAAGCCACGCGGCAAGAAC+CGG - chr4_2:37012797-37012816 None:intergenic 55.0%
TTCAAGAGCCGAACGAGCGT+GGG - chr4_2:37012825-37012844 None:intergenic 55.0%
TTTCAAGAGCCGAACGAGCG+TGG - chr4_2:37012826-37012845 None:intergenic 55.0%
ATTTGCTCCGGCTCCGTTGT+TGG - chr4_2:37012852-37012871 None:intergenic 55.0%
TGGGAGGAGAAGAAGGAGTG+AGG - chr4_2:37012591-37012610 None:intergenic 55.0%
CAGCATGAGTGAAGAGTGGG+AGG - chr4_2:37012607-37012626 None:intergenic 55.0%
CTCCCACTCTTCACTCATGC+TGG + chr4_2:37012605-37012624 Msa0599030:CDS 55.0%
ACTCTCCCAACCAGTCGAAC+CGG + chr4_2:37012631-37012650 Msa0599030:CDS 55.0%
! TGAACCCGGTTCGACTGGTT+GGG - chr4_2:37012639-37012658 None:intergenic 55.0%
! ATGAACCCGGTTCGACTGGT+TGG - chr4_2:37012640-37012659 None:intergenic 55.0%
TGGGTTTGAACCGGGAATGC+GGG - chr4_2:37012683-37012702 None:intergenic 55.0%
GACCTCTCCAACGAGCTCTT+CGG + chr4_2:37012722-37012741 Msa0599030:CDS 55.0%
AAAAGCCACGCGGCAAGAAC+CGG - chr4_2:37012797-37012816 None:intergenic 55.0%
TTCAAGAGCCGAACGAGCGT+GGG - chr4_2:37012825-37012844 None:intergenic 55.0%
TTTCAAGAGCCGAACGAGCG+TGG - chr4_2:37012826-37012845 None:intergenic 55.0%
ATTTGCTCCGGCTCCGTTGT+TGG - chr4_2:37012852-37012871 None:intergenic 55.0%
CTCTCCCAACCAGTCGAACC+GGG + chr4_2:37012632-37012651 Msa0599030:CDS 60.0%
! GGGTATGAACCCGGTTCGAC+TGG - chr4_2:37012644-37012663 None:intergenic 60.0%
CGGGGACTGTGTTGGAGGAT+GGG - chr4_2:37012664-37012683 None:intergenic 60.0%
GAATGCGGGGACTGTGTTGG+AGG - chr4_2:37012669-37012688 None:intergenic 60.0%
CAACACAGTCCCCGCATTCC+CGG + chr4_2:37012670-37012689 Msa0599030:CDS 60.0%
GGGTTTGAACCGGGAATGCG+GGG - chr4_2:37012682-37012701 None:intergenic 60.0%
CTCTCCAACGAGCTCTTCGG+CGG + chr4_2:37012725-37012744 Msa0599030:CDS 60.0%
GACAGCAACGACTGCGGTCT+AGG - chr4_2:37012775-37012794 None:intergenic 60.0%
AGACCGCAGTCGTTGCTGTC+CGG + chr4_2:37012775-37012794 Msa0599030:CDS 60.0%
GAACCGGACAGCAACGACTG+CGG - chr4_2:37012781-37012800 None:intergenic 60.0%
GCTTCGGCTCCATCCTCAAC+AGG + chr4_2:37012875-37012894 Msa0599030:CDS 60.0%
CTCTCCCAACCAGTCGAACC+GGG + chr4_2:37012632-37012651 Msa0599030:CDS 60.0%
! GGGTATGAACCCGGTTCGAC+TGG - chr4_2:37012644-37012663 None:intergenic 60.0%
CGGGGACTGTGTTGGAGGAT+GGG - chr4_2:37012664-37012683 None:intergenic 60.0%
GAATGCGGGGACTGTGTTGG+AGG - chr4_2:37012669-37012688 None:intergenic 60.0%
CAACACAGTCCCCGCATTCC+CGG + chr4_2:37012670-37012689 Msa0599030:CDS 60.0%
GGGTTTGAACCGGGAATGCG+GGG - chr4_2:37012682-37012701 None:intergenic 60.0%
CTCTCCAACGAGCTCTTCGG+CGG + chr4_2:37012725-37012744 Msa0599030:CDS 60.0%
GACAGCAACGACTGCGGTCT+AGG - chr4_2:37012775-37012794 None:intergenic 60.0%
AGACCGCAGTCGTTGCTGTC+CGG + chr4_2:37012775-37012794 Msa0599030:CDS 60.0%
GAACCGGACAGCAACGACTG+CGG - chr4_2:37012781-37012800 None:intergenic 60.0%
GCTTCGGCTCCATCCTCAAC+AGG + chr4_2:37012875-37012894 Msa0599030:CDS 60.0%
GCGGGGACTGTGTTGGAGGA+TGG - chr4_2:37012665-37012684 None:intergenic 65.0%
CGGGAATGCGGGGACTGTGT+TGG - chr4_2:37012672-37012691 None:intergenic 65.0%
CGCCGAAGAGCTCGTTGGAG+AGG - chr4_2:37012727-37012746 None:intergenic 65.0%
TACGCCGCCGAAGAGCTCGT+TGG - chr4_2:37012732-37012751 None:intergenic 65.0%
GGCGGCGTAAAAGCCGCTTG+CGG + chr4_2:37012743-37012762 Msa0599030:CDS 65.0%
TTTCGCCGCCCACGCTCGTT+CGG + chr4_2:37012814-37012833 Msa0599030:CDS 65.0%
AAGAGCCGAACGAGCGTGGG+CGG - chr4_2:37012822-37012841 None:intergenic 65.0%
GCGGGGACTGTGTTGGAGGA+TGG - chr4_2:37012665-37012684 None:intergenic 65.0%
CGGGAATGCGGGGACTGTGT+TGG - chr4_2:37012672-37012691 None:intergenic 65.0%
CGCCGAAGAGCTCGTTGGAG+AGG - chr4_2:37012727-37012746 None:intergenic 65.0%
TACGCCGCCGAAGAGCTCGT+TGG - chr4_2:37012732-37012751 None:intergenic 65.0%
GGCGGCGTAAAAGCCGCTTG+CGG + chr4_2:37012743-37012762 Msa0599030:CDS 65.0%
TTTCGCCGCCCACGCTCGTT+CGG + chr4_2:37012814-37012833 Msa0599030:CDS 65.0%
AAGAGCCGAACGAGCGTGGG+CGG - chr4_2:37012822-37012841 None:intergenic 65.0%
GCTGTCCGGTTCTTGCCGCG+TGG + chr4_2:37012789-37012808 Msa0599030:CDS 70.0%
GTGGGCGGCGAAAAGCCACG+CGG - chr4_2:37012807-37012826 None:intergenic 70.0%
GCTGTCCGGTTCTTGCCGCG+TGG + chr4_2:37012789-37012808 Msa0599030:CDS 70.0%
GTGGGCGGCGAAAAGCCACG+CGG - chr4_2:37012807-37012826 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 37012327 37014537 37012327 ID=Msa0599030;Name=Msa0599030
chr4_2 mRNA 37012327 37014537 37012327 ID=Msa0599030-mRNA-1;Parent=Msa0599030;Name=Msa0599030-mRNA-1;_AED=0.01;_eAED=0.01;_QI=230|1|1|1|1|1|2|395|317
chr4_2 exon 37012327 37013195 37012327 ID=Msa0599030-mRNA-1:exon:8379;Parent=Msa0599030-mRNA-1
chr4_2 exon 37013828 37014537 37013828 ID=Msa0599030-mRNA-1:exon:8380;Parent=Msa0599030-mRNA-1
chr4_2 five_prime_UTR 37012327 37012556 37012327 ID=Msa0599030-mRNA-1:five_prime_utr;Parent=Msa0599030-mRNA-1
chr4_2 CDS 37012557 37013195 37012557 ID=Msa0599030-mRNA-1:cds;Parent=Msa0599030-mRNA-1
chr4_2 CDS 37013828 37014142 37013828 ID=Msa0599030-mRNA-1:cds;Parent=Msa0599030-mRNA-1
chr4_2 three_prime_UTR 37014143 37014537 37014143 ID=Msa0599030-mRNA-1:three_prime_utr;Parent=Msa0599030-mRNA-1
Gene Sequence

>Msa0599030

ATGCAATCATTCACATACTTCCTTTTCATCACCTCACTCCTTCTTCTCCTCCCACTCTTCACTCATGCTGGTTTACTCTCCCAACCAGTCGAACCGGGTTCATACCCATCCTCCAACACAGTCCCCGCATTCCCGGTTCAAACCCAAACCCAAATCTGCAAACTCGACCTCTCCAACGAGCTCTTCGGCGGCGTAAAAGCCGCTTGCGGCAAAAACCTAGACCGCAGTCGTTGCTGTCCGGTTCTTGCCGCGTGGCTTTTCGCCGCCCACGCTCGTTCGGCTCTTGAAATAACCAACAACGGAGCCGGAGCAAATAATGCTTCGGCTCCATCCTCAACAGGAGAACAACTTCCGATGATGCCTGATGACTCACAAAAATGCGTAAATTCCTTACAAGACTCACTTATGAGTCGAAATATTCGAATCCCACAACCTAATGCAACGTGTGATGCGATTCTTTGTTTTTGTGGTATTAGGTTACATCAAATAAGCTCATTGTCTTGTTCTGCTGCGTTTAATGTTTCGGGTTCGCATAAAAATGCTGCTGCTACTCCAACTGCTGCTGTTCGTAACTTGGAAAATAATTGTCGTAATGCTTCTTATCAGGGTTGCACTAAATGTCTCTCTGCCCTACAAAAGGTTAAGAGTTACAAGAACGCTACAAAGGGAGCTAGTGAAAGAGTTAAGAAGATGTTTAACAGAGATTGTGAACTAATGGGTTTAACATGGTTACTAGCAAAGAACAAAACGACATACATACCCACCGTTTCAGCAGTTCTACGTGCAATGATGTATAGTGCACACCCACATGAATCAAAGTGTAGTCCTGATCAAGAAAACATGCCATTAGCCGTTGATTCACTTCAATTTGAAAGTGGTCATGCTCCATCTTGGCCGTCCAAATTATGGGCTACTATATTAACTTTAATCATGTTATTTTGTTCTTTTGTTTAA
Protein sequence

>Msa0599030

MQSFTYFLFITSLLLLLPLFTHAGLLSQPVEPGSYPSSNTVPAFPVQTQTQICKLDLSNELFGGVKAACGKNLDRSRCCPVLAAWLFAAHARSALEITNNGAGANNASAPSSTGEQLPMMPDDSQKCVNSLQDSLMSRNIRIPQPNATCDAILCFCGIRLHQISSLSCSAAFNVSGSHKNAAATPTAAVRNLENNCRNASYQGCTKCLSALQKVKSYKNATKGASERVKKMFNRDCELMGLTWLLAKNKTTYIPTVSAVLRAMMYSAHPHESKCSPDQENMPLAVDSLQFESGHAPSWPSKLWATILTLIMLFCSFV*