AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0639800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0639800 MtrunA17_Chr4g0022791 96.238 319 7 4 1 317 1 316 0.0 617
Msa0639800 MtrunA17_Chr2g0323391 68.881 286 63 6 39 310 23 296 3.14e-135 385
Msa0639800 MtrunA17_Chr8g0392751 40.132 304 144 8 7 287 14 302 2.50e-64 206
Msa0639800 MtrunA17_Chr6g0482961 38.614 303 156 11 7 290 11 302 9.76e-63 202
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0639800 AT4G28100.1 65.085 295 87 6 24 317 22 301 1.08e-129 372
Msa0639800 AT3G18050.1 39.039 333 165 10 11 312 7 332 6.48e-67 213

Find 109 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGCTGCTGTTCGTAATT+TGG 0.119642 4_3:+36690181 Msa0639800:CDS
TTTGAGGGAGAAAGTGATTT+TGG 0.153709 4_3:-36689490 None:intergenic
GCCTTGTAAATTGCAGATAA+TGG 0.183560 4_3:+36691387 Msa0639800:three_prime_UTR
TCTGCTGCGTTTAATGTTTC+GGG 0.214488 4_3:+36690131 Msa0639800:CDS
TTCTGCTGCGTTTAATGTTT+CGG 0.218238 4_3:+36690130 Msa0639800:CDS
AACTTAAGAGCCTAGCATTT+TGG 0.238930 4_3:-36691467 None:intergenic
TAATATAGTAGCCCATAATT+TGG 0.244037 4_3:-36691148 None:intergenic
CATCTTGGCCGTCCAAATTA+TGG 0.245463 4_3:+36691136 Msa0639800:CDS
TTGGGAGAAGATAAAGAAAA+AGG 0.250200 4_3:-36689596 None:intergenic
AGAGGTCGAGTTTGCAGATT+TGG 0.268829 4_3:-36689779 None:intergenic
CCTTGTAAATTGCAGATAAT+GGG 0.276144 4_3:+36691388 Msa0639800:three_prime_UTR
GAGTTTGCAGATTTGGGTTT+GGG 0.319085 4_3:-36689772 None:intergenic
CGAGTTTGCAGATTTGGGTT+TGG 0.325136 4_3:-36689773 None:intergenic
TAACAGAGATTGTGAACTAA+TGG 0.333851 4_3:+36690945 Msa0639800:CDS
ATTATTTGTGTTGGAGTTGA+AGG 0.357479 4_3:-36689543 None:intergenic
CAACACAGTCCCCGCATTCC+CGG 0.360332 4_3:+36689743 Msa0639800:CDS
AAAAGCCACGCGGCAAGAAC+CGG 0.360533 4_3:-36689867 None:intergenic
ATCTTGGCCGTCCAAATTAT+GGG 0.373511 4_3:+36691137 Msa0639800:CDS
GGAAGTTGTTCTCCTGTTGA+TGG 0.378920 4_3:-36689957 None:intergenic
TTGGGTTTGAACCGGGAATG+CGG 0.380406 4_3:-36689754 None:intergenic
ACTCTCCCAACCGGTCGAAC+CGG 0.381650 4_3:+36689704 Msa0639800:CDS
TGTCGTAATGCTTCTTATCA+AGG 0.390258 4_3:+36690212 Msa0639800:CDS
TGAAGTGAATCAACGGCTAA+TGG 0.395320 4_3:-36691093 None:intergenic
GAGGTCGAGTTTGCAGATTT+GGG 0.397903 4_3:-36689778 None:intergenic
GTTGTTTGCTCCGGCTCCGT+TGG 0.400832 4_3:-36689925 None:intergenic
GACACAAGCATCCAAGAATT+AGG 0.404992 4_3:-36691293 None:intergenic
GAAGGAGTGAGGTGATGAAA+AGG 0.407969 4_3:-36689647 None:intergenic
TGGGTTTGAACCGGGAATGC+GGG 0.408581 4_3:-36689753 None:intergenic
ATCGCATCACACGTTGCATT+AGG 0.409232 4_3:-36690059 None:intergenic
ATTTGGGTTTGGGTTTGAAC+CGG 0.414362 4_3:-36689762 None:intergenic
AATAGCAATTTAATTTAAGA+TGG 0.415880 4_3:-36691524 None:intergenic
AACGCTTCGGCTCCATCAAC+AGG 0.418790 4_3:+36689945 Msa0639800:CDS
AACAGAGATTGTGAACTAAT+GGG 0.422082 4_3:+36690946 Msa0639800:CDS
GGTGTAGTGTAGTGTTTCTC+TGG 0.424198 4_3:-36689424 None:intergenic
TGTGAGTCATCAGGCATCAT+AGG 0.424348 4_3:-36689978 None:intergenic
ACGCATTTCTGTGAGTCATC+AGG 0.425626 4_3:-36689987 None:intergenic
CATAATTTGGACGGCCAAGA+TGG 0.431678 4_3:-36691135 None:intergenic
AAAGCAAAATAGTCAAATCA+TGG 0.432209 4_3:+36689371 None:intergenic
AAAAGAGAGAGAAGAAGAAG+AGG 0.444832 4_3:-36691250 None:intergenic
CACACGTTGCATTAGGTTGA+GGG 0.445985 4_3:-36690052 None:intergenic
TTTCGCCGCCCACGCTCGTT+CGG 0.449306 4_3:+36689887 Msa0639800:CDS
TTGTGTCACGTGAAGAAGTT+AGG 0.449562 4_3:+36691309 Msa0639800:three_prime_UTR
AGCCGAAGCGTTGTTTGCTC+CGG 0.460154 4_3:-36689934 None:intergenic
GCGGGGACTGTGTTGGAGGA+TGG 0.460235 4_3:-36689735 None:intergenic
CCCATTATCTGCAATTTACA+AGG 0.461229 4_3:-36691388 None:intergenic
TTGTTTGCTCCGGCTCCGTT+GGG 0.462563 4_3:-36689924 None:intergenic
GACCGGTTGGGAGAGTAAAC+CGG 0.468125 4_3:-36689697 None:intergenic
GAGAGAGAGATTATTTGTGT+TGG 0.473801 4_3:-36689552 None:intergenic
CGGGGACTGTGTTGGAGGAT+GGG 0.475483 4_3:-36689734 None:intergenic
CGGGAATGCGGGGACTGTGT+TGG 0.482579 4_3:-36689742 None:intergenic
GATTCACTTCAATTTGAAAG+TGG 0.489122 4_3:+36691105 Msa0639800:CDS
AAAGTGGTCATGCTCCATCT+TGG 0.495611 4_3:+36691121 Msa0639800:CDS
ACTCATAAGTGAGTCTTGTA+AGG 0.496885 4_3:-36690015 None:intergenic
GGGTATGAACCCGGTTCGAC+CGG 0.497066 4_3:-36689714 None:intergenic
CTCTCCCAACCGGTCGAACC+GGG 0.498189 4_3:+36689705 Msa0639800:CDS
ATGTCTCTCTGCCCTACAAA+AGG 0.500405 4_3:+36690244 Msa0639800:CDS
TGCACGTAGAACTGCTGAAA+CGG 0.501145 4_3:-36691013 None:intergenic
GAATGCGGGGACTGTGTTGG+AGG 0.503728 4_3:-36689739 None:intergenic
ATGAACCCGGTTCGACCGGT+TGG 0.503966 4_3:-36689710 None:intergenic
TGAACCCGGTTCGACCGGTT+GGG 0.504528 4_3:-36689709 None:intergenic
TCACACGTTGCATTAGGTTG+AGG 0.506375 4_3:-36690053 None:intergenic
AAATTACGAACAGCAGCAGT+TGG 0.509346 4_3:-36690179 None:intergenic
TGTGTTGGAGTTGAAGGAGA+TGG 0.517085 4_3:-36689537 None:intergenic
GACCTCTCCAACGAGCTCTT+CGG 0.518170 4_3:+36689795 Msa0639800:CDS
TTTGGGTTTGGGTTTGAACC+GGG 0.520446 4_3:-36689761 None:intergenic
AGACCGCAGTCGTTGCTGTC+CGG 0.520782 4_3:+36689848 Msa0639800:CDS
GTTCTGAAAAGCAGAGAAGA+AGG 0.521030 4_3:-36689448 None:intergenic
TGCCGGTTTACTCTCCCAAC+CGG 0.523405 4_3:+36689695 Msa0639800:CDS
GACAGCAACGACTGCGGTCT+AGG 0.524595 4_3:-36689845 None:intergenic
AGCCGGAGCAAACAACGCTT+CGG 0.528528 4_3:+36689932 Msa0639800:CDS
CTGCCACTCTTCACTCATGC+CGG 0.534559 4_3:+36689678 Msa0639800:CDS
GAAATAACACCCAACGGAGC+CGG 0.540274 4_3:+36689915 Msa0639800:CDS
TTCAAATTGAAGTGAATCAA+CGG 0.545392 4_3:-36691100 None:intergenic
GAGTTGAAGGAGATGGTGAT+GGG 0.545687 4_3:-36689530 None:intergenic
AGTTACAAGAACGCTACAAA+GGG 0.550539 4_3:+36690895 Msa0639800:CDS
GGAGTTGAAGGAGATGGTGA+TGG 0.551180 4_3:-36689531 None:intergenic
GGGTTTGAACCGGGAATGCG+GGG 0.558028 4_3:-36689752 None:intergenic
GGACTACACTTTGATTCATG+TGG 0.560071 4_3:-36691054 None:intergenic
TTTCGAGAGCCGAACGAGCG+TGG 0.571651 4_3:-36689896 None:intergenic
AAGCAAAATAGTCAAATCAT+GGG 0.571714 4_3:+36689372 None:intergenic
AATTAGGCCAAAAGAGAAGA+GGG 0.579095 4_3:-36691277 None:intergenic
ACGTAGAACTGCTGAAACGG+TGG 0.579762 4_3:-36691010 None:intergenic
GAGTGAGGTGATGAAAAGGA+AGG 0.582011 4_3:-36689643 None:intergenic
GAGAGCCGAACGAGCGTGGG+CGG 0.582908 4_3:-36689892 None:intergenic
CGCCGAAGAGCTCGTTGGAG+AGG 0.584739 4_3:-36689797 None:intergenic
TTCGAGAGCCGAACGAGCGT+GGG 0.585175 4_3:-36689895 None:intergenic
AGAGTGGCAGTAGAAGAAGA+AGG 0.586286 4_3:-36689665 None:intergenic
CAGTAGAAGAAGAAGGAGTG+AGG 0.587844 4_3:-36689658 None:intergenic
GAGTTACAAGAACGCTACAA+AGG 0.590808 4_3:+36690894 Msa0639800:CDS
GACTACACTTTGATTCATGT+GGG 0.591239 4_3:-36691053 None:intergenic
GAGAGAGAAGAAGAAGAGGA+TGG 0.598188 4_3:-36691246 None:intergenic
CTTGTAAATTGCAGATAATG+GGG 0.598337 4_3:+36691389 Msa0639800:three_prime_UTR
TTGAAGGAGATGGTGATGGG+TGG 0.603760 4_3:-36689527 None:intergenic
TACGCCGCCGAAGAGCTCGT+TGG 0.611881 4_3:-36689802 None:intergenic
GAATTAGGCCAAAAGAGAAG+AGG 0.613602 4_3:-36691278 None:intergenic
GGCGGCGTAAAAGCCGCCTG+CGG 0.615099 4_3:+36689816 Msa0639800:CDS
ATAGTAGCCCATAATTTGGA+CGG 0.616883 4_3:-36691144 None:intergenic
GTGAACTAATGGGTTTAACA+TGG 0.617355 4_3:+36690956 Msa0639800:CDS
ACGTGAAGAAGTTAGGCTAG+TGG 0.621245 4_3:+36691316 Msa0639800:three_prime_UTR
CGTAGAACTGCTGAAACGGT+GGG 0.636801 4_3:-36691009 None:intergenic
GCTGTCCGGTTCTTGCCGCG+TGG 0.638492 4_3:+36689862 Msa0639800:CDS
CTCTCCAACGAGCTCTTCGG+CGG 0.652599 4_3:+36689798 Msa0639800:CDS
CTAGTGGACAAAATCAGCAG+TGG 0.656842 4_3:+36691332 Msa0639800:three_prime_UTR
TTGGAGGATGGGTATGAACC+CGG 0.664144 4_3:-36689723 None:intergenic
AAACCGGCATGAGTGAAGAG+TGG 0.671483 4_3:-36689681 None:intergenic
GAACCGGACAGCAACGACTG+CGG 0.698885 4_3:-36689851 None:intergenic
GCTCTCGAAATAACACCCAA+CGG 0.705251 4_3:+36689909 Msa0639800:CDS
CTGAAAAGCAGAGAAGAAGG+TGG 0.709550 4_3:-36689445 None:intergenic
GTGGGCGGCGAAAAGCCACG+CGG 0.715002 4_3:-36689877 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTAATTTATTTATTTATAC+AGG + chr4_3:36690867-36690886 Msa0639800:intron 10.0%
!! GTTAATTTATTTATTTATAC+AGG + chr4_3:36690867-36690886 Msa0639800:intron 10.0%
!! CTTTAAATTATCATTAACTT+AGG + chr4_3:36690284-36690303 Msa0639800:intron 15.0%
!! AAAACTAAACTAATAGAAAT+GGG - chr4_3:36690351-36690370 None:intergenic 15.0%
!! AAAAACTAAACTAATAGAAA+TGG - chr4_3:36690352-36690371 None:intergenic 15.0%
!!! TTCTATTAGTTTAGTTTTTT+TGG + chr4_3:36690353-36690372 Msa0639800:intron 15.0%
!!! TCTATTAGTTTAGTTTTTTT+GGG + chr4_3:36690354-36690373 Msa0639800:intron 15.0%
!!! TGTAATCTTTGTTATTTTTT+TGG + chr4_3:36690397-36690416 Msa0639800:intron 15.0%
!!! GTAATCTTTGTTATTTTTTT+GGG + chr4_3:36690398-36690417 Msa0639800:intron 15.0%
!! AAGAAAAAATGAATAGAAAT+AGG + chr4_3:36690519-36690538 Msa0639800:intron 15.0%
!!! TTTTACAATTTACAAACAAA+GGG - chr4_3:36690621-36690640 None:intergenic 15.0%
!!! ATTTTACAATTTACAAACAA+AGG - chr4_3:36690622-36690641 None:intergenic 15.0%
!!! TTTTGTTCTTTTGTTTAAAA+AGG + chr4_3:36691186-36691205 Msa0639800:exon 15.0%
!!! AATAGCAATTTAATTTAAGA+TGG - chr4_3:36691527-36691546 None:intergenic 15.0%
!! CTTTAAATTATCATTAACTT+AGG + chr4_3:36690284-36690303 Msa0639800:intron 15.0%
!! AAAACTAAACTAATAGAAAT+GGG - chr4_3:36690351-36690370 None:intergenic 15.0%
!! AAAAACTAAACTAATAGAAA+TGG - chr4_3:36690352-36690371 None:intergenic 15.0%
!!! TTCTATTAGTTTAGTTTTTT+TGG + chr4_3:36690353-36690372 Msa0639800:intron 15.0%
!!! TCTATTAGTTTAGTTTTTTT+GGG + chr4_3:36690354-36690373 Msa0639800:intron 15.0%
!!! TGTAATCTTTGTTATTTTTT+TGG + chr4_3:36690397-36690416 Msa0639800:intron 15.0%
!!! GTAATCTTTGTTATTTTTTT+GGG + chr4_3:36690398-36690417 Msa0639800:intron 15.0%
!! AAGAAAAAATGAATAGAAAT+AGG + chr4_3:36690519-36690538 Msa0639800:intron 15.0%
!!! TTTTACAATTTACAAACAAA+GGG - chr4_3:36690621-36690640 None:intergenic 15.0%
!!! ATTTTACAATTTACAAACAA+AGG - chr4_3:36690622-36690641 None:intergenic 15.0%
!!! TTTTGTTCTTTTGTTTAAAA+AGG + chr4_3:36691186-36691205 Msa0639800:exon 15.0%
!!! AATAGCAATTTAATTTAAGA+TGG - chr4_3:36691527-36691546 None:intergenic 15.0%
!!! ATGATTGCATTTTGATTTTT+GGG - chr4_3:36689617-36689636 None:intergenic 20.0%
!!! AATGATTGCATTTTGATTTT+TGG - chr4_3:36689618-36689637 None:intergenic 20.0%
!!! TATTTGTTGTGTTTATTTTG+TGG + chr4_3:36690311-36690330 Msa0639800:intron 20.0%
!!! ATTTGTTGTGTTTATTTTGT+GGG + chr4_3:36690312-36690331 Msa0639800:intron 20.0%
!! AAACTAAACTAATAGAAATG+GGG - chr4_3:36690350-36690369 None:intergenic 20.0%
!!! GAAATAGGAAACAAATTTTT+TGG + chr4_3:36690534-36690553 Msa0639800:intron 20.0%
!! AATTGTAAAATTTGAACTAG+AGG + chr4_3:36690631-36690650 Msa0639800:intron 20.0%
!! ATTGTAAAATTTGAACTAGA+GGG + chr4_3:36690632-36690651 Msa0639800:intron 20.0%
!!! AACTGTTTAGTTGAATTTTT+TGG + chr4_3:36691213-36691232 Msa0639800:three_prime_UTR 20.0%
!!! ACTGTTTAGTTGAATTTTTT+GGG + chr4_3:36691214-36691233 Msa0639800:three_prime_UTR 20.0%
!!! TTTTTTCTATCTAAAATGTG+AGG - chr4_3:36691447-36691466 None:intergenic 20.0%
!!! ATGATTGCATTTTGATTTTT+GGG - chr4_3:36689617-36689636 None:intergenic 20.0%
!!! AATGATTGCATTTTGATTTT+TGG - chr4_3:36689618-36689637 None:intergenic 20.0%
!!! TATTTGTTGTGTTTATTTTG+TGG + chr4_3:36690311-36690330 Msa0639800:intron 20.0%
!!! ATTTGTTGTGTTTATTTTGT+GGG + chr4_3:36690312-36690331 Msa0639800:intron 20.0%
!! AAACTAAACTAATAGAAATG+GGG - chr4_3:36690350-36690369 None:intergenic 20.0%
!!! GAAATAGGAAACAAATTTTT+TGG + chr4_3:36690534-36690553 Msa0639800:intron 20.0%
!! AATTGTAAAATTTGAACTAG+AGG + chr4_3:36690631-36690650 Msa0639800:intron 20.0%
!! ATTGTAAAATTTGAACTAGA+GGG + chr4_3:36690632-36690651 Msa0639800:intron 20.0%
!!! AACTGTTTAGTTGAATTTTT+TGG + chr4_3:36691213-36691232 Msa0639800:three_prime_UTR 20.0%
!!! ACTGTTTAGTTGAATTTTTT+GGG + chr4_3:36691214-36691233 Msa0639800:three_prime_UTR 20.0%
!!! TTTTTTCTATCTAAAATGTG+AGG - chr4_3:36691447-36691466 None:intergenic 20.0%
!!! TGGGTTTTGTTGAAAATTAT+AGG - chr4_3:36689473-36689492 None:intergenic 25.0%
! AGATAAAGAAAAAGGAAAAG+TGG - chr4_3:36689591-36689610 None:intergenic 25.0%
!!! TTCTTTGTTTTTGTGGTATT+AGG + chr4_3:36690081-36690100 Msa0639800:CDS 25.0%
!! AAAGTAAAGAACCTTTTGTA+GGG - chr4_3:36690258-36690277 None:intergenic 25.0%
!! AAAAGTAAAGAACCTTTTGT+AGG - chr4_3:36690259-36690278 None:intergenic 25.0%
!!! TGTTATTTTTTTGGGTGAAA+TGG + chr4_3:36690406-36690425 Msa0639800:intron 25.0%
! TTGTAAAATTTGAACTAGAG+GGG + chr4_3:36690633-36690652 Msa0639800:intron 25.0%
! ATGAAAAAGGTTGTCATAAT+TGG - chr4_3:36690749-36690768 None:intergenic 25.0%
! GAATATTCAATAACATGACA+TGG + chr4_3:36690845-36690864 Msa0639800:intron 25.0%
! TTCAAATTGAAGTGAATCAA+CGG - chr4_3:36691103-36691122 None:intergenic 25.0%
! TAATATAGTAGCCCATAATT+TGG - chr4_3:36691151-36691170 None:intergenic 25.0%
! ATAGAAAAAACCAAAATGCT+AGG + chr4_3:36691457-36691476 Msa0639800:three_prime_UTR 25.0%
!! GTATTTTTCATTTTCATGAG+CGG + chr4_3:36691610-36691629 Msa0639800:three_prime_UTR 25.0%
!!! TGGGTTTTGTTGAAAATTAT+AGG - chr4_3:36689473-36689492 None:intergenic 25.0%
! AGATAAAGAAAAAGGAAAAG+TGG - chr4_3:36689591-36689610 None:intergenic 25.0%
!!! TTCTTTGTTTTTGTGGTATT+AGG + chr4_3:36690081-36690100 Msa0639800:CDS 25.0%
!! AAAGTAAAGAACCTTTTGTA+GGG - chr4_3:36690258-36690277 None:intergenic 25.0%
!! AAAAGTAAAGAACCTTTTGT+AGG - chr4_3:36690259-36690278 None:intergenic 25.0%
!!! TGTTATTTTTTTGGGTGAAA+TGG + chr4_3:36690406-36690425 Msa0639800:intron 25.0%
! TTGTAAAATTTGAACTAGAG+GGG + chr4_3:36690633-36690652 Msa0639800:intron 25.0%
! ATGAAAAAGGTTGTCATAAT+TGG - chr4_3:36690749-36690768 None:intergenic 25.0%
! GAATATTCAATAACATGACA+TGG + chr4_3:36690845-36690864 Msa0639800:intron 25.0%
! TTCAAATTGAAGTGAATCAA+CGG - chr4_3:36691103-36691122 None:intergenic 25.0%
! TAATATAGTAGCCCATAATT+TGG - chr4_3:36691151-36691170 None:intergenic 25.0%
! ATAGAAAAAACCAAAATGCT+AGG + chr4_3:36691457-36691476 Msa0639800:three_prime_UTR 25.0%
!! GTATTTTTCATTTTCATGAG+CGG + chr4_3:36691610-36691629 Msa0639800:three_prime_UTR 25.0%
!!! TCTGGTTTTACTTTTTCTCT+TGG - chr4_3:36689409-36689428 None:intergenic 30.0%
! GAAAAAGATGAGCTTTTTGA+GGG - chr4_3:36689508-36689527 None:intergenic 30.0%
ATTATTTGTGTTGGAGTTGA+AGG - chr4_3:36689546-36689565 None:intergenic 30.0%
TTGGGAGAAGATAAAGAAAA+AGG - chr4_3:36689599-36689618 None:intergenic 30.0%
!!! TTTTGGTTTATGCTTGAACT+TGG + chr4_3:36690551-36690570 Msa0639800:intron 30.0%
TCTCATCATTGTGATTCAAT+GGG - chr4_3:36690595-36690614 None:intergenic 30.0%
TTCTCATCATTGTGATTCAA+TGG - chr4_3:36690596-36690615 None:intergenic 30.0%
TAACAGAGATTGTGAACTAA+TGG + chr4_3:36690945-36690964 Msa0639800:CDS 30.0%
AACAGAGATTGTGAACTAAT+GGG + chr4_3:36690946-36690965 Msa0639800:CDS 30.0%
GATTCACTTCAATTTGAAAG+TGG + chr4_3:36691105-36691124 Msa0639800:CDS 30.0%
CCTTGTAAATTGCAGATAAT+GGG + chr4_3:36691388-36691407 Msa0639800:three_prime_UTR 30.0%
CTTGTAAATTGCAGATAATG+GGG + chr4_3:36691389-36691408 Msa0639800:three_prime_UTR 30.0%
!!! TCTGGTTTTACTTTTTCTCT+TGG - chr4_3:36689409-36689428 None:intergenic 30.0%
! GAAAAAGATGAGCTTTTTGA+GGG - chr4_3:36689508-36689527 None:intergenic 30.0%
ATTATTTGTGTTGGAGTTGA+AGG - chr4_3:36689546-36689565 None:intergenic 30.0%
TTGGGAGAAGATAAAGAAAA+AGG - chr4_3:36689599-36689618 None:intergenic 30.0%
!!! TTTTGGTTTATGCTTGAACT+TGG + chr4_3:36690551-36690570 Msa0639800:intron 30.0%
TCTCATCATTGTGATTCAAT+GGG - chr4_3:36690595-36690614 None:intergenic 30.0%
TTCTCATCATTGTGATTCAA+TGG - chr4_3:36690596-36690615 None:intergenic 30.0%
TAACAGAGATTGTGAACTAA+TGG + chr4_3:36690945-36690964 Msa0639800:CDS 30.0%
AACAGAGATTGTGAACTAAT+GGG + chr4_3:36690946-36690965 Msa0639800:CDS 30.0%
GATTCACTTCAATTTGAAAG+TGG + chr4_3:36691105-36691124 Msa0639800:CDS 30.0%
CCTTGTAAATTGCAGATAAT+GGG + chr4_3:36691388-36691407 Msa0639800:three_prime_UTR 30.0%
CTTGTAAATTGCAGATAATG+GGG + chr4_3:36691389-36691408 Msa0639800:three_prime_UTR 30.0%
! TTGAGGGAGAAAGTGATTTT+GGG - chr4_3:36689492-36689511 None:intergenic 35.0%
! TTTGAGGGAGAAAGTGATTT+TGG - chr4_3:36689493-36689512 None:intergenic 35.0%
! GGAAAAAGATGAGCTTTTTG+AGG - chr4_3:36689509-36689528 None:intergenic 35.0%
GAGAGAGAGATTATTTGTGT+TGG - chr4_3:36689555-36689574 None:intergenic 35.0%
! ACTCATAAGTGAGTCTTGTA+AGG - chr4_3:36690018-36690037 None:intergenic 35.0%
!!! GATGCGATTCTTTGTTTTTG+TGG + chr4_3:36690074-36690093 Msa0639800:CDS 35.0%
TTCTGCTGCGTTTAATGTTT+CGG + chr4_3:36690130-36690149 Msa0639800:CDS 35.0%
TGTCGTAATGCTTCTTATCA+AGG + chr4_3:36690212-36690231 Msa0639800:CDS 35.0%
TCATAATTGGCAAACTCATG+TGG - chr4_3:36690736-36690755 None:intergenic 35.0%
AGTTACAAGAACGCTACAAA+GGG + chr4_3:36690895-36690914 Msa0639800:CDS 35.0%
!! GTGAACTAATGGGTTTAACA+TGG + chr4_3:36690956-36690975 Msa0639800:CDS 35.0%
GACTACACTTTGATTCATGT+GGG - chr4_3:36691056-36691075 None:intergenic 35.0%
! AATGGCATGTTTTCTTGATC+AGG - chr4_3:36691078-36691097 None:intergenic 35.0%
ATAGTAGCCCATAATTTGGA+CGG - chr4_3:36691147-36691166 None:intergenic 35.0%
AAAAGAGAGAGAAGAAGAAG+AGG - chr4_3:36691253-36691272 None:intergenic 35.0%
! TTTTTGTCCCTCTTCTCTTT+TGG + chr4_3:36691270-36691289 Msa0639800:three_prime_UTR 35.0%
AATTAGGCCAAAAGAGAAGA+GGG - chr4_3:36691280-36691299 None:intergenic 35.0%
! TTCTCTTTTGGCCTAATTCT+TGG + chr4_3:36691282-36691301 Msa0639800:three_prime_UTR 35.0%
! GGAAGATGTTTTGTAACAAG+AGG + chr4_3:36691353-36691372 Msa0639800:three_prime_UTR 35.0%
GCCTTGTAAATTGCAGATAA+TGG + chr4_3:36691387-36691406 Msa0639800:three_prime_UTR 35.0%
CCCATTATCTGCAATTTACA+AGG - chr4_3:36691391-36691410 None:intergenic 35.0%
! AACTTAAGAGCCTAGCATTT+TGG - chr4_3:36691470-36691489 None:intergenic 35.0%
!! GCTAGGCTCTTAAGTTTTAT+CGG + chr4_3:36691474-36691493 Msa0639800:three_prime_UTR 35.0%
! TTGAGGGAGAAAGTGATTTT+GGG - chr4_3:36689492-36689511 None:intergenic 35.0%
! TTTGAGGGAGAAAGTGATTT+TGG - chr4_3:36689493-36689512 None:intergenic 35.0%
! GGAAAAAGATGAGCTTTTTG+AGG - chr4_3:36689509-36689528 None:intergenic 35.0%
GAGAGAGAGATTATTTGTGT+TGG - chr4_3:36689555-36689574 None:intergenic 35.0%
! ACTCATAAGTGAGTCTTGTA+AGG - chr4_3:36690018-36690037 None:intergenic 35.0%
!!! GATGCGATTCTTTGTTTTTG+TGG + chr4_3:36690074-36690093 Msa0639800:CDS 35.0%
TTCTGCTGCGTTTAATGTTT+CGG + chr4_3:36690130-36690149 Msa0639800:CDS 35.0%
TGTCGTAATGCTTCTTATCA+AGG + chr4_3:36690212-36690231 Msa0639800:CDS 35.0%
TCATAATTGGCAAACTCATG+TGG - chr4_3:36690736-36690755 None:intergenic 35.0%
AGTTACAAGAACGCTACAAA+GGG + chr4_3:36690895-36690914 Msa0639800:CDS 35.0%
!! GTGAACTAATGGGTTTAACA+TGG + chr4_3:36690956-36690975 Msa0639800:CDS 35.0%
GACTACACTTTGATTCATGT+GGG - chr4_3:36691056-36691075 None:intergenic 35.0%
! AATGGCATGTTTTCTTGATC+AGG - chr4_3:36691078-36691097 None:intergenic 35.0%
ATAGTAGCCCATAATTTGGA+CGG - chr4_3:36691147-36691166 None:intergenic 35.0%
AAAAGAGAGAGAAGAAGAAG+AGG - chr4_3:36691253-36691272 None:intergenic 35.0%
! TTTTTGTCCCTCTTCTCTTT+TGG + chr4_3:36691270-36691289 Msa0639800:three_prime_UTR 35.0%
AATTAGGCCAAAAGAGAAGA+GGG - chr4_3:36691280-36691299 None:intergenic 35.0%
! TTCTCTTTTGGCCTAATTCT+TGG + chr4_3:36691282-36691301 Msa0639800:three_prime_UTR 35.0%
! GGAAGATGTTTTGTAACAAG+AGG + chr4_3:36691353-36691372 Msa0639800:three_prime_UTR 35.0%
GCCTTGTAAATTGCAGATAA+TGG + chr4_3:36691387-36691406 Msa0639800:three_prime_UTR 35.0%
CCCATTATCTGCAATTTACA+AGG - chr4_3:36691391-36691410 None:intergenic 35.0%
! AACTTAAGAGCCTAGCATTT+TGG - chr4_3:36691470-36691489 None:intergenic 35.0%
!! GCTAGGCTCTTAAGTTTTAT+CGG + chr4_3:36691474-36691493 Msa0639800:three_prime_UTR 35.0%
!! GTTCTGAAAAGCAGAGAAGA+AGG - chr4_3:36689451-36689470 None:intergenic 40.0%
! ATTTGGGTTTGGGTTTGAAC+CGG - chr4_3:36689765-36689784 None:intergenic 40.0%
! GAGTTTGCAGATTTGGGTTT+GGG - chr4_3:36689775-36689794 None:intergenic 40.0%
TCTGCTGCGTTTAATGTTTC+GGG + chr4_3:36690131-36690150 Msa0639800:CDS 40.0%
AAATTACGAACAGCAGCAGT+TGG - chr4_3:36690182-36690201 None:intergenic 40.0%
AACTGCTGCTGTTCGTAATT+TGG + chr4_3:36690181-36690200 Msa0639800:CDS 40.0%
! TCATTGTGATTCAATGGGCT+TGG - chr4_3:36690590-36690609 None:intergenic 40.0%
GAGTTACAAGAACGCTACAA+AGG + chr4_3:36690894-36690913 Msa0639800:CDS 40.0%
GGACTACACTTTGATTCATG+TGG - chr4_3:36691057-36691076 None:intergenic 40.0%
TGAAGTGAATCAACGGCTAA+TGG - chr4_3:36691096-36691115 None:intergenic 40.0%
ATCTTGGCCGTCCAAATTAT+GGG + chr4_3:36691137-36691156 Msa0639800:CDS 40.0%
GAATTAGGCCAAAAGAGAAG+AGG - chr4_3:36691281-36691300 None:intergenic 40.0%
GACACAAGCATCCAAGAATT+AGG - chr4_3:36691296-36691315 None:intergenic 40.0%
TTGTGTCACGTGAAGAAGTT+AGG + chr4_3:36691309-36691328 Msa0639800:three_prime_UTR 40.0%
!! GTTCTGAAAAGCAGAGAAGA+AGG - chr4_3:36689451-36689470 None:intergenic 40.0%
! ATTTGGGTTTGGGTTTGAAC+CGG - chr4_3:36689765-36689784 None:intergenic 40.0%
! GAGTTTGCAGATTTGGGTTT+GGG - chr4_3:36689775-36689794 None:intergenic 40.0%
TCTGCTGCGTTTAATGTTTC+GGG + chr4_3:36690131-36690150 Msa0639800:CDS 40.0%
AAATTACGAACAGCAGCAGT+TGG - chr4_3:36690182-36690201 None:intergenic 40.0%
AACTGCTGCTGTTCGTAATT+TGG + chr4_3:36690181-36690200 Msa0639800:CDS 40.0%
! TCATTGTGATTCAATGGGCT+TGG - chr4_3:36690590-36690609 None:intergenic 40.0%
GAGTTACAAGAACGCTACAA+AGG + chr4_3:36690894-36690913 Msa0639800:CDS 40.0%
GGACTACACTTTGATTCATG+TGG - chr4_3:36691057-36691076 None:intergenic 40.0%
TGAAGTGAATCAACGGCTAA+TGG - chr4_3:36691096-36691115 None:intergenic 40.0%
ATCTTGGCCGTCCAAATTAT+GGG + chr4_3:36691137-36691156 Msa0639800:CDS 40.0%
GAATTAGGCCAAAAGAGAAG+AGG - chr4_3:36691281-36691300 None:intergenic 40.0%
GACACAAGCATCCAAGAATT+AGG - chr4_3:36691296-36691315 None:intergenic 40.0%
TTGTGTCACGTGAAGAAGTT+AGG + chr4_3:36691309-36691328 Msa0639800:three_prime_UTR 40.0%
GGTGTAGTGTAGTGTTTCTC+TGG - chr4_3:36689427-36689446 None:intergenic 45.0%
CTGAAAAGCAGAGAAGAAGG+TGG - chr4_3:36689448-36689467 None:intergenic 45.0%
GAGTTGAAGGAGATGGTGAT+GGG - chr4_3:36689533-36689552 None:intergenic 45.0%
TGTGTTGGAGTTGAAGGAGA+TGG - chr4_3:36689540-36689559 None:intergenic 45.0%
GAGTGAGGTGATGAAAAGGA+AGG - chr4_3:36689646-36689665 None:intergenic 45.0%
GAAGGAGTGAGGTGATGAAA+AGG - chr4_3:36689650-36689669 None:intergenic 45.0%
CAGTAGAAGAAGAAGGAGTG+AGG - chr4_3:36689661-36689680 None:intergenic 45.0%
AGAGTGGCAGTAGAAGAAGA+AGG - chr4_3:36689668-36689687 None:intergenic 45.0%
! TTTGGGTTTGGGTTTGAACC+GGG - chr4_3:36689764-36689783 None:intergenic 45.0%
! CGAGTTTGCAGATTTGGGTT+TGG - chr4_3:36689776-36689795 None:intergenic 45.0%
GAGGTCGAGTTTGCAGATTT+GGG - chr4_3:36689781-36689800 None:intergenic 45.0%
AGAGGTCGAGTTTGCAGATT+TGG - chr4_3:36689782-36689801 None:intergenic 45.0%
GCTCTCGAAATAACACCCAA+CGG + chr4_3:36689909-36689928 Msa0639800:CDS 45.0%
GGAAGTTGTTCTCCTGTTGA+TGG - chr4_3:36689960-36689979 None:intergenic 45.0%
TGTGAGTCATCAGGCATCAT+AGG - chr4_3:36689981-36690000 None:intergenic 45.0%
ACGCATTTCTGTGAGTCATC+AGG - chr4_3:36689990-36690009 None:intergenic 45.0%
!! CACACGTTGCATTAGGTTGA+GGG - chr4_3:36690055-36690074 None:intergenic 45.0%
! TCACACGTTGCATTAGGTTG+AGG - chr4_3:36690056-36690075 None:intergenic 45.0%
ATCGCATCACACGTTGCATT+AGG - chr4_3:36690062-36690081 None:intergenic 45.0%
ATGTCTCTCTGCCCTACAAA+AGG + chr4_3:36690244-36690263 Msa0639800:CDS 45.0%
TGCACGTAGAACTGCTGAAA+CGG - chr4_3:36691016-36691035 None:intergenic 45.0%
AAAGTGGTCATGCTCCATCT+TGG + chr4_3:36691121-36691140 Msa0639800:CDS 45.0%
CATAATTTGGACGGCCAAGA+TGG - chr4_3:36691138-36691157 None:intergenic 45.0%
CATCTTGGCCGTCCAAATTA+TGG + chr4_3:36691136-36691155 Msa0639800:CDS 45.0%
GAGAGAGAAGAAGAAGAGGA+TGG - chr4_3:36691249-36691268 None:intergenic 45.0%
ACGTGAAGAAGTTAGGCTAG+TGG + chr4_3:36691316-36691335 Msa0639800:three_prime_UTR 45.0%
! CTAGTGGACAAAATCAGCAG+TGG + chr4_3:36691332-36691351 Msa0639800:three_prime_UTR 45.0%
GGTGTAGTGTAGTGTTTCTC+TGG - chr4_3:36689427-36689446 None:intergenic 45.0%
CTGAAAAGCAGAGAAGAAGG+TGG - chr4_3:36689448-36689467 None:intergenic 45.0%
GAGTTGAAGGAGATGGTGAT+GGG - chr4_3:36689533-36689552 None:intergenic 45.0%
TGTGTTGGAGTTGAAGGAGA+TGG - chr4_3:36689540-36689559 None:intergenic 45.0%
GAGTGAGGTGATGAAAAGGA+AGG - chr4_3:36689646-36689665 None:intergenic 45.0%
GAAGGAGTGAGGTGATGAAA+AGG - chr4_3:36689650-36689669 None:intergenic 45.0%
CAGTAGAAGAAGAAGGAGTG+AGG - chr4_3:36689661-36689680 None:intergenic 45.0%
AGAGTGGCAGTAGAAGAAGA+AGG - chr4_3:36689668-36689687 None:intergenic 45.0%
! TTTGGGTTTGGGTTTGAACC+GGG - chr4_3:36689764-36689783 None:intergenic 45.0%
! CGAGTTTGCAGATTTGGGTT+TGG - chr4_3:36689776-36689795 None:intergenic 45.0%
GAGGTCGAGTTTGCAGATTT+GGG - chr4_3:36689781-36689800 None:intergenic 45.0%
AGAGGTCGAGTTTGCAGATT+TGG - chr4_3:36689782-36689801 None:intergenic 45.0%
GCTCTCGAAATAACACCCAA+CGG + chr4_3:36689909-36689928 Msa0639800:CDS 45.0%
GGAAGTTGTTCTCCTGTTGA+TGG - chr4_3:36689960-36689979 None:intergenic 45.0%
TGTGAGTCATCAGGCATCAT+AGG - chr4_3:36689981-36690000 None:intergenic 45.0%
ACGCATTTCTGTGAGTCATC+AGG - chr4_3:36689990-36690009 None:intergenic 45.0%
!! CACACGTTGCATTAGGTTGA+GGG - chr4_3:36690055-36690074 None:intergenic 45.0%
! TCACACGTTGCATTAGGTTG+AGG - chr4_3:36690056-36690075 None:intergenic 45.0%
ATCGCATCACACGTTGCATT+AGG - chr4_3:36690062-36690081 None:intergenic 45.0%
ATGTCTCTCTGCCCTACAAA+AGG + chr4_3:36690244-36690263 Msa0639800:CDS 45.0%
TGCACGTAGAACTGCTGAAA+CGG - chr4_3:36691016-36691035 None:intergenic 45.0%
AAAGTGGTCATGCTCCATCT+TGG + chr4_3:36691121-36691140 Msa0639800:CDS 45.0%
CATAATTTGGACGGCCAAGA+TGG - chr4_3:36691138-36691157 None:intergenic 45.0%
CATCTTGGCCGTCCAAATTA+TGG + chr4_3:36691136-36691155 Msa0639800:CDS 45.0%
GAGAGAGAAGAAGAAGAGGA+TGG - chr4_3:36691249-36691268 None:intergenic 45.0%
ACGTGAAGAAGTTAGGCTAG+TGG + chr4_3:36691316-36691335 Msa0639800:three_prime_UTR 45.0%
! CTAGTGGACAAAATCAGCAG+TGG + chr4_3:36691332-36691351 Msa0639800:three_prime_UTR 45.0%
!! AATTATTAAAAATATGAAAA+AGG - chr4_3:36690762-36690781 None:intergenic 5.0%
!! AATTATTAAAAATATGAAAA+AGG - chr4_3:36690762-36690781 None:intergenic 5.0%
!! TTGAAGGAGATGGTGATGGG+TGG - chr4_3:36689530-36689549 None:intergenic 50.0%
GGAGTTGAAGGAGATGGTGA+TGG - chr4_3:36689534-36689553 None:intergenic 50.0%
AAACCGGCATGAGTGAAGAG+TGG - chr4_3:36689684-36689703 None:intergenic 50.0%
TTGGAGGATGGGTATGAACC+CGG - chr4_3:36689726-36689745 None:intergenic 50.0%
TTGGGTTTGAACCGGGAATG+CGG - chr4_3:36689757-36689776 None:intergenic 50.0%
GAAATAACACCCAACGGAGC+CGG + chr4_3:36689915-36689934 Msa0639800:CDS 50.0%
CGTAGAACTGCTGAAACGGT+GGG - chr4_3:36691012-36691031 None:intergenic 50.0%
ACGTAGAACTGCTGAAACGG+TGG - chr4_3:36691013-36691032 None:intergenic 50.0%
!! TTGAAGGAGATGGTGATGGG+TGG - chr4_3:36689530-36689549 None:intergenic 50.0%
GGAGTTGAAGGAGATGGTGA+TGG - chr4_3:36689534-36689553 None:intergenic 50.0%
AAACCGGCATGAGTGAAGAG+TGG - chr4_3:36689684-36689703 None:intergenic 50.0%
TTGGAGGATGGGTATGAACC+CGG - chr4_3:36689726-36689745 None:intergenic 50.0%
TTGGGTTTGAACCGGGAATG+CGG - chr4_3:36689757-36689776 None:intergenic 50.0%
GAAATAACACCCAACGGAGC+CGG + chr4_3:36689915-36689934 Msa0639800:CDS 50.0%
CGTAGAACTGCTGAAACGGT+GGG - chr4_3:36691012-36691031 None:intergenic 50.0%
ACGTAGAACTGCTGAAACGG+TGG - chr4_3:36691013-36691032 None:intergenic 50.0%
CTGCCACTCTTCACTCATGC+CGG + chr4_3:36689678-36689697 Msa0639800:CDS 55.0%
!! TGCCGGTTTACTCTCCCAAC+CGG + chr4_3:36689695-36689714 Msa0639800:CDS 55.0%
GACCGGTTGGGAGAGTAAAC+CGG - chr4_3:36689700-36689719 None:intergenic 55.0%
TGGGTTTGAACCGGGAATGC+GGG - chr4_3:36689756-36689775 None:intergenic 55.0%
GACCTCTCCAACGAGCTCTT+CGG + chr4_3:36689795-36689814 Msa0639800:CDS 55.0%
! GTCTAGGTTTTTGCCGCAGG+CGG - chr4_3:36689832-36689851 None:intergenic 55.0%
AAAAGCCACGCGGCAAGAAC+CGG - chr4_3:36689870-36689889 None:intergenic 55.0%
TTGTTTGCTCCGGCTCCGTT+GGG - chr4_3:36689927-36689946 None:intergenic 55.0%
AGCCGGAGCAAACAACGCTT+CGG + chr4_3:36689932-36689951 Msa0639800:CDS 55.0%
!! AGCCGAAGCGTTGTTTGCTC+CGG - chr4_3:36689937-36689956 None:intergenic 55.0%
AACGCTTCGGCTCCATCAAC+AGG + chr4_3:36689945-36689964 Msa0639800:CDS 55.0%
CTGCCACTCTTCACTCATGC+CGG + chr4_3:36689678-36689697 Msa0639800:CDS 55.0%
!! TGCCGGTTTACTCTCCCAAC+CGG + chr4_3:36689695-36689714 Msa0639800:CDS 55.0%
GACCGGTTGGGAGAGTAAAC+CGG - chr4_3:36689700-36689719 None:intergenic 55.0%
TGGGTTTGAACCGGGAATGC+GGG - chr4_3:36689756-36689775 None:intergenic 55.0%
GACCTCTCCAACGAGCTCTT+CGG + chr4_3:36689795-36689814 Msa0639800:CDS 55.0%
! GTCTAGGTTTTTGCCGCAGG+CGG - chr4_3:36689832-36689851 None:intergenic 55.0%
AAAAGCCACGCGGCAAGAAC+CGG - chr4_3:36689870-36689889 None:intergenic 55.0%
TTGTTTGCTCCGGCTCCGTT+GGG - chr4_3:36689927-36689946 None:intergenic 55.0%
AGCCGGAGCAAACAACGCTT+CGG + chr4_3:36689932-36689951 Msa0639800:CDS 55.0%
!! AGCCGAAGCGTTGTTTGCTC+CGG - chr4_3:36689937-36689956 None:intergenic 55.0%
AACGCTTCGGCTCCATCAAC+AGG + chr4_3:36689945-36689964 Msa0639800:CDS 55.0%
ACTCTCCCAACCGGTCGAAC+CGG + chr4_3:36689704-36689723 Msa0639800:CDS 60.0%
! TGAACCCGGTTCGACCGGTT+GGG - chr4_3:36689712-36689731 None:intergenic 60.0%
! ATGAACCCGGTTCGACCGGT+TGG - chr4_3:36689713-36689732 None:intergenic 60.0%
! GGGTATGAACCCGGTTCGAC+CGG - chr4_3:36689717-36689736 None:intergenic 60.0%
CGGGGACTGTGTTGGAGGAT+GGG - chr4_3:36689737-36689756 None:intergenic 60.0%
GAATGCGGGGACTGTGTTGG+AGG - chr4_3:36689742-36689761 None:intergenic 60.0%
CAACACAGTCCCCGCATTCC+CGG + chr4_3:36689743-36689762 Msa0639800:CDS 60.0%
GGGTTTGAACCGGGAATGCG+GGG - chr4_3:36689755-36689774 None:intergenic 60.0%
CTCTCCAACGAGCTCTTCGG+CGG + chr4_3:36689798-36689817 Msa0639800:CDS 60.0%
! GCGGTCTAGGTTTTTGCCGC+AGG - chr4_3:36689835-36689854 None:intergenic 60.0%
GACAGCAACGACTGCGGTCT+AGG - chr4_3:36689848-36689867 None:intergenic 60.0%
AGACCGCAGTCGTTGCTGTC+CGG + chr4_3:36689848-36689867 Msa0639800:CDS 60.0%
GAACCGGACAGCAACGACTG+CGG - chr4_3:36689854-36689873 None:intergenic 60.0%
TTCGAGAGCCGAACGAGCGT+GGG - chr4_3:36689898-36689917 None:intergenic 60.0%
TTTCGAGAGCCGAACGAGCG+TGG - chr4_3:36689899-36689918 None:intergenic 60.0%
GTTGTTTGCTCCGGCTCCGT+TGG - chr4_3:36689928-36689947 None:intergenic 60.0%
ACTCTCCCAACCGGTCGAAC+CGG + chr4_3:36689704-36689723 Msa0639800:CDS 60.0%
! TGAACCCGGTTCGACCGGTT+GGG - chr4_3:36689712-36689731 None:intergenic 60.0%
! ATGAACCCGGTTCGACCGGT+TGG - chr4_3:36689713-36689732 None:intergenic 60.0%
! GGGTATGAACCCGGTTCGAC+CGG - chr4_3:36689717-36689736 None:intergenic 60.0%
CGGGGACTGTGTTGGAGGAT+GGG - chr4_3:36689737-36689756 None:intergenic 60.0%
GAATGCGGGGACTGTGTTGG+AGG - chr4_3:36689742-36689761 None:intergenic 60.0%
CAACACAGTCCCCGCATTCC+CGG + chr4_3:36689743-36689762 Msa0639800:CDS 60.0%
GGGTTTGAACCGGGAATGCG+GGG - chr4_3:36689755-36689774 None:intergenic 60.0%
CTCTCCAACGAGCTCTTCGG+CGG + chr4_3:36689798-36689817 Msa0639800:CDS 60.0%
! GCGGTCTAGGTTTTTGCCGC+AGG - chr4_3:36689835-36689854 None:intergenic 60.0%
GACAGCAACGACTGCGGTCT+AGG - chr4_3:36689848-36689867 None:intergenic 60.0%
AGACCGCAGTCGTTGCTGTC+CGG + chr4_3:36689848-36689867 Msa0639800:CDS 60.0%
GAACCGGACAGCAACGACTG+CGG - chr4_3:36689854-36689873 None:intergenic 60.0%
TTCGAGAGCCGAACGAGCGT+GGG - chr4_3:36689898-36689917 None:intergenic 60.0%
TTTCGAGAGCCGAACGAGCG+TGG - chr4_3:36689899-36689918 None:intergenic 60.0%
GTTGTTTGCTCCGGCTCCGT+TGG - chr4_3:36689928-36689947 None:intergenic 60.0%
CTCTCCCAACCGGTCGAACC+GGG + chr4_3:36689705-36689724 Msa0639800:CDS 65.0%
GCGGGGACTGTGTTGGAGGA+TGG - chr4_3:36689738-36689757 None:intergenic 65.0%
CGGGAATGCGGGGACTGTGT+TGG - chr4_3:36689745-36689764 None:intergenic 65.0%
CGCCGAAGAGCTCGTTGGAG+AGG - chr4_3:36689800-36689819 None:intergenic 65.0%
TACGCCGCCGAAGAGCTCGT+TGG - chr4_3:36689805-36689824 None:intergenic 65.0%
TTTCGCCGCCCACGCTCGTT+CGG + chr4_3:36689887-36689906 Msa0639800:CDS 65.0%
CTCTCCCAACCGGTCGAACC+GGG + chr4_3:36689705-36689724 Msa0639800:CDS 65.0%
GCGGGGACTGTGTTGGAGGA+TGG - chr4_3:36689738-36689757 None:intergenic 65.0%
CGGGAATGCGGGGACTGTGT+TGG - chr4_3:36689745-36689764 None:intergenic 65.0%
CGCCGAAGAGCTCGTTGGAG+AGG - chr4_3:36689800-36689819 None:intergenic 65.0%
TACGCCGCCGAAGAGCTCGT+TGG - chr4_3:36689805-36689824 None:intergenic 65.0%
TTTCGCCGCCCACGCTCGTT+CGG + chr4_3:36689887-36689906 Msa0639800:CDS 65.0%
GGCGGCGTAAAAGCCGCCTG+CGG + chr4_3:36689816-36689835 Msa0639800:CDS 70.0%
GCTGTCCGGTTCTTGCCGCG+TGG + chr4_3:36689862-36689881 Msa0639800:CDS 70.0%
GTGGGCGGCGAAAAGCCACG+CGG - chr4_3:36689880-36689899 None:intergenic 70.0%
GAGAGCCGAACGAGCGTGGG+CGG - chr4_3:36689895-36689914 None:intergenic 70.0%
GGCGGCGTAAAAGCCGCCTG+CGG + chr4_3:36689816-36689835 Msa0639800:CDS 70.0%
GCTGTCCGGTTCTTGCCGCG+TGG + chr4_3:36689862-36689881 Msa0639800:CDS 70.0%
GTGGGCGGCGAAAAGCCACG+CGG - chr4_3:36689880-36689899 None:intergenic 70.0%
GAGAGCCGAACGAGCGTGGG+CGG - chr4_3:36689895-36689914 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 36689377 36691633 36689377 ID=Msa0639800;Name=Msa0639800
chr4_3 mRNA 36689377 36691633 36689377 ID=Msa0639800-mRNA-1;Parent=Msa0639800;Name=Msa0639800-mRNA-1;_AED=0.26;_eAED=0.26;_QI=250|1|1|1|1|1|2|430|317
chr4_3 exon 36689377 36690265 36689377 ID=Msa0639800-mRNA-1:exon:8472;Parent=Msa0639800-mRNA-1
chr4_3 exon 36690889 36691633 36690889 ID=Msa0639800-mRNA-1:exon:8473;Parent=Msa0639800-mRNA-1
chr4_3 five_prime_UTR 36689377 36689626 36689377 ID=Msa0639800-mRNA-1:five_prime_utr;Parent=Msa0639800-mRNA-1
chr4_3 CDS 36689627 36690265 36689627 ID=Msa0639800-mRNA-1:cds;Parent=Msa0639800-mRNA-1
chr4_3 CDS 36690889 36691203 36690889 ID=Msa0639800-mRNA-1:cds;Parent=Msa0639800-mRNA-1
chr4_3 three_prime_UTR 36691204 36691633 36691204 ID=Msa0639800-mRNA-1:three_prime_utr;Parent=Msa0639800-mRNA-1
Gene Sequence

>Msa0639800

ATGCAATCATTCACATCCTTCCTTTTCATCACCTCACTCCTTCTTCTTCTACTGCCACTCTTCACTCATGCCGGTTTACTCTCCCAACCGGTCGAACCGGGTTCATACCCATCCTCCAACACAGTCCCCGCATTCCCGGTTCAAACCCAAACCCAAATCTGCAAACTCGACCTCTCCAACGAGCTCTTCGGCGGCGTAAAAGCCGCCTGCGGCAAAAACCTAGACCGCAGTCGTTGCTGTCCGGTTCTTGCCGCGTGGCTTTTCGCCGCCCACGCTCGTTCGGCTCTCGAAATAACACCCAACGGAGCCGGAGCAAACAACGCTTCGGCTCCATCAACAGGAGAACAACTTCCTATGATGCCTGATGACTCACAGAAATGCGTAAATTCCTTACAAGACTCACTTATGAGTCGAAATATTCGAATCCCTCAACCTAATGCAACGTGTGATGCGATTCTTTGTTTTTGTGGTATTAGGTTACATCAAATAAGCTCATTGTCTTGTTCTGCTGCGTTTAATGTTTCGGGTTCGCATAAAAATGCTGCTGCTACTCCAACTGCTGCTGTTCGTAATTTGGAAAATAATTGTCGTAATGCTTCTTATCAAGGTTGCACTAAATGTCTCTCTGCCCTACAAAAGGTCAAGAGTTACAAGAACGCTACAAAGGGAGCTAGTGAAAGAGTTAAGAAGATGTTTAACAGAGATTGTGAACTAATGGGTTTAACATGGTTACTAGCAAAGAACAAAACGACATACATACCCACCGTTTCAGCAGTTCTACGTGCAATGATGTATAGTGCACACCCACATGAATCAAAGTGTAGTCCTGATCAAGAAAACATGCCATTAGCCGTTGATTCACTTCAATTTGAAAGTGGTCATGCTCCATCTTGGCCGTCCAAATTATGGGCTACTATATTAACTTTAATCATGTTATTTTGTTCTTTTGTTTAA
Protein sequence

>Msa0639800

MQSFTSFLFITSLLLLLLPLFTHAGLLSQPVEPGSYPSSNTVPAFPVQTQTQICKLDLSNELFGGVKAACGKNLDRSRCCPVLAAWLFAAHARSALEITPNGAGANNASAPSTGEQLPMMPDDSQKCVNSLQDSLMSRNIRIPQPNATCDAILCFCGIRLHQISSLSCSAAFNVSGSHKNAAATPTAAVRNLENNCRNASYQGCTKCLSALQKVKSYKNATKGASERVKKMFNRDCELMGLTWLLAKNKTTYIPTVSAVLRAMMYSAHPHESKCSPDQENMPLAVDSLQFESGHAPSWPSKLWATILTLIMLFCSFV*