AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0639810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0639810 MtrunA17_Chr4g0022791 94.375 320 12 5 1 318 1 316 0.0 591
Msa0639810 MtrunA17_Chr2g0323391 68.641 287 63 6 39 311 23 296 3.18e-136 388
Msa0639810 MtrunA17_Chr8g0392751 38.095 336 163 9 7 313 14 333 1.33e-64 207
Msa0639810 MtrunA17_Chr6g0482961 39.145 304 154 11 7 291 11 302 2.10e-63 204
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0639810 AT4G28100.1 64.865 296 87 5 24 318 22 301 1.14e-130 374
Msa0639810 AT3G18050.1 39.640 333 164 10 11 313 7 332 9.41e-68 215

Find 104 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGCTGCTGTTCGTAATT+TGG 0.119642 4_3:+36696827 Msa0639810:CDS
TTTGAGGGAGAAAGTGATTT+TGG 0.153709 4_3:-36696133 None:intergenic
TCTGCTGCGTTTAATGTTTC+GGG 0.214488 4_3:+36696777 Msa0639810:CDS
TTCTGCTGCGTTTAATGTTT+CGG 0.218238 4_3:+36696776 Msa0639810:CDS
TAATATAGTAGCCCATAATT+TGG 0.244037 4_3:-36697786 None:intergenic
CATCTTGGCCGTCCAAATTA+TGG 0.245463 4_3:+36697774 Msa0639810:CDS
TTGGGAGAAGATAAAGAAAA+AGG 0.250200 4_3:-36696239 None:intergenic
AGAGGTCGAGTTTGCAGATT+TGG 0.268829 4_3:-36696422 None:intergenic
AATAATTAGTAGTACAAGTT+AGG 0.311806 4_3:+36698177 Msa0639810:three_prime_UTR
GAGTTTGCAGATTTGGGTTT+GGG 0.319085 4_3:-36696415 None:intergenic
CGAGTTTGCAGATTTGGGTT+TGG 0.325136 4_3:-36696416 None:intergenic
TAACAGAGATTGTGAACTAA+TGG 0.333851 4_3:+36697583 Msa0639810:CDS
ATTATTTGTGTTGGAGTTGA+AGG 0.357479 4_3:-36696186 None:intergenic
CAACACAGTCCCCGCATTCC+CGG 0.360332 4_3:+36696386 Msa0639810:CDS
AAAAGCCACGCGGCAAGAAC+CGG 0.360533 4_3:-36696510 None:intergenic
ATCTTGGCCGTCCAAATTAT+GGG 0.373511 4_3:+36697775 Msa0639810:CDS
TTGGGTTTGAACCGGGAATG+CGG 0.380406 4_3:-36696397 None:intergenic
ACTCTCTCAACCGGTCCAAC+CGG 0.385377 4_3:+36696347 Msa0639810:CDS
TGTCGTAATGCTTCTTATCA+AGG 0.390258 4_3:+36696858 Msa0639810:CDS
TGAAGTGAATCAACGGCTAA+TGG 0.395320 4_3:-36697731 None:intergenic
GAGGTCGAGTTTGCAGATTT+GGG 0.397903 4_3:-36696421 None:intergenic
GACACAAGCATCCAAGAATT+AGG 0.404992 4_3:-36697929 None:intergenic
TGGGTTTGAACCGGGAATGC+GGG 0.408581 4_3:-36696396 None:intergenic
ATCGCATCACACGTTGCATT+AGG 0.409232 4_3:-36696705 None:intergenic
GAAGGAGTGAGGAGATGAAA+AGG 0.410408 4_3:-36696290 None:intergenic
ATTTGGGTTTGGGTTTGAAC+CGG 0.414362 4_3:-36696405 None:intergenic
AACAGAGATTGTGAACTAAT+GGG 0.422082 4_3:+36697584 Msa0639810:CDS
GGTGTAGTGTAGTGTTTCTC+TGG 0.424198 4_3:-36696066 None:intergenic
ATTATTTGCTCCGGCTCCGT+TGG 0.425652 4_3:-36696568 None:intergenic
CATAATTTGGACGGCCAAGA+TGG 0.431678 4_3:-36697773 None:intergenic
AAAGCAAAATAGTCAAATCA+TGG 0.432209 4_3:+36696013 None:intergenic
TTATTTGCTCCGGCTCCGTT+GGG 0.438480 4_3:-36696567 None:intergenic
CACACGTTGCATTAGGTTGA+GGG 0.445985 4_3:-36696698 None:intergenic
AATGGCATGTTCTCTTGATC+AGG 0.447008 4_3:-36697713 None:intergenic
TTTCGCCGCCCACGCTCGTT+CGG 0.449306 4_3:+36696530 Msa0639810:CDS
TTGTGTCACGTGAAGAAGTT+AGG 0.449562 4_3:+36697945 Msa0639810:three_prime_UTR
CTCATTATCTGTAATTTACA+AGG 0.453834 4_3:-36698024 None:intergenic
GCTTCGGCTCCATCCTCAAC+AGG 0.455805 4_3:+36696591 Msa0639810:CDS
GCGGGGACTGTGTTGGAGGA+TGG 0.460235 4_3:-36696378 None:intergenic
GAGAGAGAGATTATTTGTGT+TGG 0.473801 4_3:-36696195 None:intergenic
AAAGTGGTCGTGCTCCATCT+TGG 0.475261 4_3:+36697759 Msa0639810:CDS
CGGGGACTGTGTTGGAGGAT+GGG 0.475483 4_3:-36696377 None:intergenic
CTCCCACTGTTCACTCATGC+AGG 0.476301 4_3:+36696321 Msa0639810:CDS
CGGGAATGCGGGGACTGTGT+TGG 0.482579 4_3:-36696385 None:intergenic
CTAATAACAGACATGAATAG+TGG 0.485411 4_3:-36698051 None:intergenic
GATTCACTTCAATTTGAAAG+TGG 0.489122 4_3:+36697743 Msa0639810:CDS
GGGTATGAACCCGGTTGGAC+CGG 0.495508 4_3:-36696357 None:intergenic
AGCCGAAGCATTATTTGCTC+CGG 0.496721 4_3:-36696577 None:intergenic
ATGTCTCTCTGCCCTACAAA+AGG 0.500405 4_3:+36696890 Msa0639810:CDS
TGCACGTAGAACTGCTGAAA+CGG 0.501145 4_3:-36697651 None:intergenic
TGCAGGTTTACTCTCTCAAC+CGG 0.503626 4_3:+36696338 Msa0639810:CDS
GAATGCGGGGACTGTGTTGG+AGG 0.503728 4_3:-36696382 None:intergenic
TCACACGTTGCATTAGGTTG+AGG 0.506375 4_3:-36696699 None:intergenic
TAATTAATAACAATTAAAGA+TGG 0.508087 4_3:-36698152 None:intergenic
AAATTACGAACAGCAGCAGT+TGG 0.509346 4_3:-36696825 None:intergenic
AGCCGGAGCAAATAATGCTT+CGG 0.512369 4_3:+36696575 Msa0639810:CDS
AGTTGTTCTCCTGTTGAGGA+TGG 0.516306 4_3:-36696600 None:intergenic
TGTGTTGGAGTTGAAGGAGA+TGG 0.517085 4_3:-36696180 None:intergenic
GACCTCTCCAACGAGCTCTT+CGG 0.518170 4_3:+36696438 Msa0639810:CDS
TTTGGGTTTGGGTTTGAACC+GGG 0.520446 4_3:-36696404 None:intergenic
AGACCGCAGTCGTTGCTGTC+CGG 0.520782 4_3:+36696491 Msa0639810:CDS
GTTCTGAAAAGCAGAGAAGA+AGG 0.521030 4_3:-36696090 None:intergenic
TGTGAGTCATCAGGCAACAT+AGG 0.521465 4_3:-36696624 None:intergenic
GACAGCAACGACTGCGGTCT+AGG 0.524595 4_3:-36696488 None:intergenic
AGGAAGTTGTTCTCCTGTTG+AGG 0.536469 4_3:-36696604 None:intergenic
GAGTGAGGAGATGAAAAGGA+AGG 0.539040 4_3:-36696286 None:intergenic
GAAATAACACCCAACGGAGC+CGG 0.540274 4_3:+36696558 Msa0639810:CDS
CTCTCTCAACCGGTCCAACC+GGG 0.540569 4_3:+36696348 Msa0639810:CDS
TTCAAATTGAAGTGAATCAA+CGG 0.545392 4_3:-36697738 None:intergenic
GAGTTGAAGGAGATGGTGAT+GGG 0.545687 4_3:-36696173 None:intergenic
GGAGTTGAAGGAGATGGTGA+TGG 0.551180 4_3:-36696174 None:intergenic
GGGTTTGAACCGGGAATGCG+GGG 0.558028 4_3:-36696395 None:intergenic
GGACTACACTTTGATTCATG+TGG 0.560071 4_3:-36697692 None:intergenic
TTTCGAGAGCCGAACGAGCG+TGG 0.571651 4_3:-36696539 None:intergenic
AAGCAAAATAGTCAAATCAT+GGG 0.571714 4_3:+36696014 None:intergenic
AATTAGGCCAAAAGAGAAGA+GGG 0.579095 4_3:-36697913 None:intergenic
ACGTAGAACTGCTGAAACGG+TGG 0.579762 4_3:-36697648 None:intergenic
GAGAGCCGAACGAGCGTGGG+CGG 0.582908 4_3:-36696535 None:intergenic
CGCCGAAGAGCTCGTTGGAG+AGG 0.584739 4_3:-36696440 None:intergenic
TTCGAGAGCCGAACGAGCGT+GGG 0.585175 4_3:-36696538 None:intergenic
ACAGTGGGAGTAGAAGAAGA+AGG 0.586286 4_3:-36696308 None:intergenic
GACTACACTTTGATTCATGT+GGG 0.591239 4_3:-36697691 None:intergenic
GAGTAGAAGAAGAAGGAGTG+AGG 0.600089 4_3:-36696301 None:intergenic
TTGAAGGAGATGGTGATGGG+TGG 0.603760 4_3:-36696170 None:intergenic
AGGATGGGTATGAACCCGGT+TGG 0.608144 4_3:-36696362 None:intergenic
GGCGGCGTAAAAGCCGCATG+CGG 0.610395 4_3:+36696459 Msa0639810:CDS
TACGCCGCCGAAGAGCTCGT+TGG 0.611881 4_3:-36696445 None:intergenic
AGAGAGAGAGAAGAAGAGGA+TGG 0.612792 4_3:-36697884 None:intergenic
GAATTAGGCCAAAAGAGAAG+AGG 0.613602 4_3:-36697914 None:intergenic
AACCTGCATGAGTGAACAGT+GGG 0.614149 4_3:-36696323 None:intergenic
ATAGTAGCCCATAATTTGGA+CGG 0.616883 4_3:-36697782 None:intergenic
GTGAACTAATGGGTTTAACA+TGG 0.617355 4_3:+36697594 Msa0639810:CDS
ACTCATAAGTGAGTCTTGCA+AGG 0.618805 4_3:-36696661 None:intergenic
ACGTGAAGAAGTTAGGCTAG+TGG 0.621245 4_3:+36697952 Msa0639810:three_prime_UTR
CGTAGAACTGCTGAAACGGT+GGG 0.636801 4_3:-36697647 None:intergenic
GCTGTCCGGTTCTTGCCGCG+TGG 0.638492 4_3:+36696505 Msa0639810:CDS
CTCTCCAACGAGCTCTTCGG+CGG 0.652599 4_3:+36696441 Msa0639810:CDS
CTAGTGGACAAAATCAGCAG+TGG 0.656842 4_3:+36697968 Msa0639810:three_prime_UTR
TTGGAGGATGGGTATGAACC+CGG 0.664144 4_3:-36696366 None:intergenic
AAACCTGCATGAGTGAACAG+TGG 0.695874 4_3:-36696324 None:intergenic
GAACCGGACAGCAACGACTG+CGG 0.698885 4_3:-36696494 None:intergenic
GCTCTCGAAATAACACCCAA+CGG 0.705251 4_3:+36696552 Msa0639810:CDS
CTGAAAAGCAGAGAAGAAGG+TGG 0.709550 4_3:-36696087 None:intergenic
GTGGGCGGCGAAAAGCCACG+CGG 0.715002 4_3:-36696520 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTACAATTAGAAATAAA+GGG - chr4_3:36697271-36697290 None:intergenic 10.0%
!!! AATTTTACAATTAGAAATAA+AGG - chr4_3:36697272-36697291 None:intergenic 10.0%
!! TAATTAATAACAATTAAAGA+TGG - chr4_3:36698155-36698174 None:intergenic 10.0%
!!! ATTTTACAATTAGAAATAAA+GGG - chr4_3:36697271-36697290 None:intergenic 10.0%
!!! AATTTTACAATTAGAAATAA+AGG - chr4_3:36697272-36697291 None:intergenic 10.0%
!! TAATTAATAACAATTAAAGA+TGG - chr4_3:36698155-36698174 None:intergenic 10.0%
!! CTTTAAATTATCATTAACTT+AGG + chr4_3:36696930-36696949 Msa0639810:intron 15.0%
!! AAAACTAAACTAATAGAAAT+GGG - chr4_3:36696997-36697016 None:intergenic 15.0%
!! AAAAACTAAACTAATAGAAA+TGG - chr4_3:36696998-36697017 None:intergenic 15.0%
!!! TTCTATTAGTTTAGTTTTTT+TGG + chr4_3:36696999-36697018 Msa0639810:intron 15.0%
!!! TCTATTAGTTTAGTTTTTTT+GGG + chr4_3:36697000-36697019 Msa0639810:intron 15.0%
!!! TGTAATCTTTGTTATTTTTT+TGG + chr4_3:36697043-36697062 Msa0639810:intron 15.0%
!!! GTAATCTTTGTTATTTTTTT+GGG + chr4_3:36697044-36697063 Msa0639810:intron 15.0%
!! ATTGTAAAATTAGAACTATA+AGG + chr4_3:36697281-36697300 Msa0639810:intron 15.0%
!! TTGTAAAATTAGAACTATAA+GGG + chr4_3:36697282-36697301 Msa0639810:intron 15.0%
!!! TTTTGTTCTTTTGTTTAAAA+AGG + chr4_3:36697824-36697843 Msa0639810:exon 15.0%
!! TTAGATAGAAAAAACAAAAA+TGG + chr4_3:36698088-36698107 Msa0639810:three_prime_UTR 15.0%
!! CTTTAAATTATCATTAACTT+AGG + chr4_3:36696930-36696949 Msa0639810:intron 15.0%
!! AAAACTAAACTAATAGAAAT+GGG - chr4_3:36696997-36697016 None:intergenic 15.0%
!! AAAAACTAAACTAATAGAAA+TGG - chr4_3:36696998-36697017 None:intergenic 15.0%
!!! TTCTATTAGTTTAGTTTTTT+TGG + chr4_3:36696999-36697018 Msa0639810:intron 15.0%
!!! TCTATTAGTTTAGTTTTTTT+GGG + chr4_3:36697000-36697019 Msa0639810:intron 15.0%
!!! TGTAATCTTTGTTATTTTTT+TGG + chr4_3:36697043-36697062 Msa0639810:intron 15.0%
!!! GTAATCTTTGTTATTTTTTT+GGG + chr4_3:36697044-36697063 Msa0639810:intron 15.0%
!! ATTGTAAAATTAGAACTATA+AGG + chr4_3:36697281-36697300 Msa0639810:intron 15.0%
!! TTGTAAAATTAGAACTATAA+GGG + chr4_3:36697282-36697301 Msa0639810:intron 15.0%
!!! TTTTGTTCTTTTGTTTAAAA+AGG + chr4_3:36697824-36697843 Msa0639810:exon 15.0%
!! TTAGATAGAAAAAACAAAAA+TGG + chr4_3:36698088-36698107 Msa0639810:three_prime_UTR 15.0%
!!! ATGATTGCATTTTGATTTTT+GGG - chr4_3:36696260-36696279 None:intergenic 20.0%
!!! AATGATTGCATTTTGATTTT+TGG - chr4_3:36696261-36696280 None:intergenic 20.0%
!!! TATTTGTTGTGTTTATTTTG+TGG + chr4_3:36696957-36696976 Msa0639810:intron 20.0%
!!! ATTTGTTGTGTTTATTTTGT+GGG + chr4_3:36696958-36696977 Msa0639810:intron 20.0%
!! AAACTAAACTAATAGAAATG+GGG - chr4_3:36696996-36697015 None:intergenic 20.0%
!! CAAGAAAAAATGAATAGAAT+AGG + chr4_3:36697157-36697176 Msa0639810:intron 20.0%
!!! ACATTTTTTTGTTTGATGTT+TGG + chr4_3:36697184-36697203 Msa0639810:intron 20.0%
!! AAGAAATGAAAAATTTGATG+TGG - chr4_3:36697315-36697334 None:intergenic 20.0%
!!! AACTGTTTAGTTGAATTTTT+TGG + chr4_3:36697851-36697870 Msa0639810:three_prime_UTR 20.0%
!!! ACTGTTTAGTTGAATTTTTT+GGG + chr4_3:36697852-36697871 Msa0639810:three_prime_UTR 20.0%
!!! TTTTTTCTATCTAAAATGTG+AGG - chr4_3:36698082-36698101 None:intergenic 20.0%
!! ATAGAAAAAACAAAAATGGT+AGG + chr4_3:36698092-36698111 Msa0639810:three_prime_UTR 20.0%
!! AATAATTAGTAGTACAAGTT+AGG + chr4_3:36698177-36698196 Msa0639810:three_prime_UTR 20.0%
!!! ATGATTGCATTTTGATTTTT+GGG - chr4_3:36696260-36696279 None:intergenic 20.0%
!!! AATGATTGCATTTTGATTTT+TGG - chr4_3:36696261-36696280 None:intergenic 20.0%
!!! TATTTGTTGTGTTTATTTTG+TGG + chr4_3:36696957-36696976 Msa0639810:intron 20.0%
!!! ATTTGTTGTGTTTATTTTGT+GGG + chr4_3:36696958-36696977 Msa0639810:intron 20.0%
!! AAACTAAACTAATAGAAATG+GGG - chr4_3:36696996-36697015 None:intergenic 20.0%
!! CAAGAAAAAATGAATAGAAT+AGG + chr4_3:36697157-36697176 Msa0639810:intron 20.0%
!!! ACATTTTTTTGTTTGATGTT+TGG + chr4_3:36697184-36697203 Msa0639810:intron 20.0%
!! AAGAAATGAAAAATTTGATG+TGG - chr4_3:36697315-36697334 None:intergenic 20.0%
!!! AACTGTTTAGTTGAATTTTT+TGG + chr4_3:36697851-36697870 Msa0639810:three_prime_UTR 20.0%
!!! ACTGTTTAGTTGAATTTTTT+GGG + chr4_3:36697852-36697871 Msa0639810:three_prime_UTR 20.0%
!!! TTTTTTCTATCTAAAATGTG+AGG - chr4_3:36698082-36698101 None:intergenic 20.0%
!! ATAGAAAAAACAAAAATGGT+AGG + chr4_3:36698092-36698111 Msa0639810:three_prime_UTR 20.0%
!! AATAATTAGTAGTACAAGTT+AGG + chr4_3:36698177-36698196 Msa0639810:three_prime_UTR 20.0%
!! GGGTTTTTGTTGAAAATTAT+AGG - chr4_3:36696115-36696134 None:intergenic 25.0%
! AGATAAAGAAAAAGGAAAAG+TGG - chr4_3:36696234-36696253 None:intergenic 25.0%
!!! TTCTTTGTTTTTGTGGTATT+AGG + chr4_3:36696727-36696746 Msa0639810:CDS 25.0%
!! AAAGTAAAGAACCTTTTGTA+GGG - chr4_3:36696904-36696923 None:intergenic 25.0%
!! AAAAGTAAAGAACCTTTTGT+AGG - chr4_3:36696905-36696924 None:intergenic 25.0%
!!! TGTTATTTTTTTGGGTGAAA+TGG + chr4_3:36697052-36697071 Msa0639810:intron 25.0%
! AATTAGAACTATAAGGGAAA+AGG + chr4_3:36697288-36697307 Msa0639810:intron 25.0%
! ATGAAAAAGGTTGTCATAAT+TGG - chr4_3:36697398-36697417 None:intergenic 25.0%
! AGTTACAAAAATGCTACAAA+GGG + chr4_3:36697533-36697552 Msa0639810:CDS 25.0%
! TTCAAATTGAAGTGAATCAA+CGG - chr4_3:36697741-36697760 None:intergenic 25.0%
! TAATATAGTAGCCCATAATT+TGG - chr4_3:36697789-36697808 None:intergenic 25.0%
! CTCATTATCTGTAATTTACA+AGG - chr4_3:36698027-36698046 None:intergenic 25.0%
!! GGGTTTTTGTTGAAAATTAT+AGG - chr4_3:36696115-36696134 None:intergenic 25.0%
! AGATAAAGAAAAAGGAAAAG+TGG - chr4_3:36696234-36696253 None:intergenic 25.0%
!!! TTCTTTGTTTTTGTGGTATT+AGG + chr4_3:36696727-36696746 Msa0639810:CDS 25.0%
!! AAAGTAAAGAACCTTTTGTA+GGG - chr4_3:36696904-36696923 None:intergenic 25.0%
!! AAAAGTAAAGAACCTTTTGT+AGG - chr4_3:36696905-36696924 None:intergenic 25.0%
!!! TGTTATTTTTTTGGGTGAAA+TGG + chr4_3:36697052-36697071 Msa0639810:intron 25.0%
! AATTAGAACTATAAGGGAAA+AGG + chr4_3:36697288-36697307 Msa0639810:intron 25.0%
! ATGAAAAAGGTTGTCATAAT+TGG - chr4_3:36697398-36697417 None:intergenic 25.0%
! AGTTACAAAAATGCTACAAA+GGG + chr4_3:36697533-36697552 Msa0639810:CDS 25.0%
! TTCAAATTGAAGTGAATCAA+CGG - chr4_3:36697741-36697760 None:intergenic 25.0%
! TAATATAGTAGCCCATAATT+TGG - chr4_3:36697789-36697808 None:intergenic 25.0%
! CTCATTATCTGTAATTTACA+AGG - chr4_3:36698027-36698046 None:intergenic 25.0%
!!! TCTGGTTTTACTTTTTCTCT+TGG - chr4_3:36696051-36696070 None:intergenic 30.0%
! GAAAAAGATGAGCTTTTTGA+GGG - chr4_3:36696151-36696170 None:intergenic 30.0%
ATTATTTGTGTTGGAGTTGA+AGG - chr4_3:36696189-36696208 None:intergenic 30.0%
TTGGGAGAAGATAAAGAAAA+AGG - chr4_3:36696242-36696261 None:intergenic 30.0%
! TTTGTTTGATGTTTGGAACT+TGG + chr4_3:36697191-36697210 Msa0639810:intron 30.0%
GAATAATCAATAACGTGACA+TGG + chr4_3:36697492-36697511 Msa0639810:intron 30.0%
GAGTTACAAAAATGCTACAA+AGG + chr4_3:36697532-36697551 Msa0639810:CDS 30.0%
TAACAGAGATTGTGAACTAA+TGG + chr4_3:36697583-36697602 Msa0639810:CDS 30.0%
AACAGAGATTGTGAACTAAT+GGG + chr4_3:36697584-36697603 Msa0639810:CDS 30.0%
GATTCACTTCAATTTGAAAG+TGG + chr4_3:36697743-36697762 Msa0639810:CDS 30.0%
CTAATAACAGACATGAATAG+TGG - chr4_3:36698054-36698073 None:intergenic 30.0%
! CAAAAATGGTAGGCTTTTAT+CGG + chr4_3:36698102-36698121 Msa0639810:three_prime_UTR 30.0%
! GTGTTTTTCATTTTCATGAG+CGG + chr4_3:36698215-36698234 Msa0639810:three_prime_UTR 30.0%
!!! TCTGGTTTTACTTTTTCTCT+TGG - chr4_3:36696051-36696070 None:intergenic 30.0%
! GAAAAAGATGAGCTTTTTGA+GGG - chr4_3:36696151-36696170 None:intergenic 30.0%
ATTATTTGTGTTGGAGTTGA+AGG - chr4_3:36696189-36696208 None:intergenic 30.0%
TTGGGAGAAGATAAAGAAAA+AGG - chr4_3:36696242-36696261 None:intergenic 30.0%
! TTTGTTTGATGTTTGGAACT+TGG + chr4_3:36697191-36697210 Msa0639810:intron 30.0%
GAATAATCAATAACGTGACA+TGG + chr4_3:36697492-36697511 Msa0639810:intron 30.0%
GAGTTACAAAAATGCTACAA+AGG + chr4_3:36697532-36697551 Msa0639810:CDS 30.0%
TAACAGAGATTGTGAACTAA+TGG + chr4_3:36697583-36697602 Msa0639810:CDS 30.0%
AACAGAGATTGTGAACTAAT+GGG + chr4_3:36697584-36697603 Msa0639810:CDS 30.0%
GATTCACTTCAATTTGAAAG+TGG + chr4_3:36697743-36697762 Msa0639810:CDS 30.0%
CTAATAACAGACATGAATAG+TGG - chr4_3:36698054-36698073 None:intergenic 30.0%
! CAAAAATGGTAGGCTTTTAT+CGG + chr4_3:36698102-36698121 Msa0639810:three_prime_UTR 30.0%
! GTGTTTTTCATTTTCATGAG+CGG + chr4_3:36698215-36698234 Msa0639810:three_prime_UTR 30.0%
! TTGAGGGAGAAAGTGATTTT+GGG - chr4_3:36696135-36696154 None:intergenic 35.0%
! TTTGAGGGAGAAAGTGATTT+TGG - chr4_3:36696136-36696155 None:intergenic 35.0%
! GGAAAAAGATGAGCTTTTTG+AGG - chr4_3:36696152-36696171 None:intergenic 35.0%
GAGAGAGAGATTATTTGTGT+TGG - chr4_3:36696198-36696217 None:intergenic 35.0%
!!! GATGCGATTCTTTGTTTTTG+TGG + chr4_3:36696720-36696739 Msa0639810:CDS 35.0%
TTCTGCTGCGTTTAATGTTT+CGG + chr4_3:36696776-36696795 Msa0639810:CDS 35.0%
TGTCGTAATGCTTCTTATCA+AGG + chr4_3:36696858-36696877 Msa0639810:CDS 35.0%
! GGGTGAAATGGAATTTTGTT+TGG + chr4_3:36697064-36697083 Msa0639810:intron 35.0%
TTTCATTGTGCAAGGTTCAA+AGG - chr4_3:36697236-36697255 None:intergenic 35.0%
CTCAAAAGTTTCATTGTGCA+AGG - chr4_3:36697244-36697263 None:intergenic 35.0%
TCATAATTGGCAAACTCATG+TGG - chr4_3:36697385-36697404 None:intergenic 35.0%
CGTGACATGGTTATTTAAAC+AGG + chr4_3:36697505-36697524 Msa0639810:intron 35.0%
!! GTGAACTAATGGGTTTAACA+TGG + chr4_3:36697594-36697613 Msa0639810:CDS 35.0%
GACTACACTTTGATTCATGT+GGG - chr4_3:36697694-36697713 None:intergenic 35.0%
ATAGTAGCCCATAATTTGGA+CGG - chr4_3:36697785-36697804 None:intergenic 35.0%
AAAAAGAGAGAGAGAAGAAG+AGG - chr4_3:36697891-36697910 None:intergenic 35.0%
! TTTTTGTCCCTCTTCTCTTT+TGG + chr4_3:36697906-36697925 Msa0639810:three_prime_UTR 35.0%
AATTAGGCCAAAAGAGAAGA+GGG - chr4_3:36697916-36697935 None:intergenic 35.0%
! TTCTCTTTTGGCCTAATTCT+TGG + chr4_3:36697918-36697937 Msa0639810:three_prime_UTR 35.0%
! GGAAGATGTTTTGTAACAAG+AGG + chr4_3:36697989-36698008 Msa0639810:three_prime_UTR 35.0%
! TTGAGGGAGAAAGTGATTTT+GGG - chr4_3:36696135-36696154 None:intergenic 35.0%
! TTTGAGGGAGAAAGTGATTT+TGG - chr4_3:36696136-36696155 None:intergenic 35.0%
! GGAAAAAGATGAGCTTTTTG+AGG - chr4_3:36696152-36696171 None:intergenic 35.0%
GAGAGAGAGATTATTTGTGT+TGG - chr4_3:36696198-36696217 None:intergenic 35.0%
!!! GATGCGATTCTTTGTTTTTG+TGG + chr4_3:36696720-36696739 Msa0639810:CDS 35.0%
TTCTGCTGCGTTTAATGTTT+CGG + chr4_3:36696776-36696795 Msa0639810:CDS 35.0%
TGTCGTAATGCTTCTTATCA+AGG + chr4_3:36696858-36696877 Msa0639810:CDS 35.0%
! GGGTGAAATGGAATTTTGTT+TGG + chr4_3:36697064-36697083 Msa0639810:intron 35.0%
TTTCATTGTGCAAGGTTCAA+AGG - chr4_3:36697236-36697255 None:intergenic 35.0%
CTCAAAAGTTTCATTGTGCA+AGG - chr4_3:36697244-36697263 None:intergenic 35.0%
TCATAATTGGCAAACTCATG+TGG - chr4_3:36697385-36697404 None:intergenic 35.0%
CGTGACATGGTTATTTAAAC+AGG + chr4_3:36697505-36697524 Msa0639810:intron 35.0%
!! GTGAACTAATGGGTTTAACA+TGG + chr4_3:36697594-36697613 Msa0639810:CDS 35.0%
GACTACACTTTGATTCATGT+GGG - chr4_3:36697694-36697713 None:intergenic 35.0%
ATAGTAGCCCATAATTTGGA+CGG - chr4_3:36697785-36697804 None:intergenic 35.0%
AAAAAGAGAGAGAGAAGAAG+AGG - chr4_3:36697891-36697910 None:intergenic 35.0%
! TTTTTGTCCCTCTTCTCTTT+TGG + chr4_3:36697906-36697925 Msa0639810:three_prime_UTR 35.0%
AATTAGGCCAAAAGAGAAGA+GGG - chr4_3:36697916-36697935 None:intergenic 35.0%
! TTCTCTTTTGGCCTAATTCT+TGG + chr4_3:36697918-36697937 Msa0639810:three_prime_UTR 35.0%
! GGAAGATGTTTTGTAACAAG+AGG + chr4_3:36697989-36698008 Msa0639810:three_prime_UTR 35.0%
!! GTTCTGAAAAGCAGAGAAGA+AGG - chr4_3:36696093-36696112 None:intergenic 40.0%
! ATTTGGGTTTGGGTTTGAAC+CGG - chr4_3:36696408-36696427 None:intergenic 40.0%
! GAGTTTGCAGATTTGGGTTT+GGG - chr4_3:36696418-36696437 None:intergenic 40.0%
! ACGCATTTTTGTGAGTCATC+AGG - chr4_3:36696636-36696655 None:intergenic 40.0%
ACTCATAAGTGAGTCTTGCA+AGG - chr4_3:36696664-36696683 None:intergenic 40.0%
TCTGCTGCGTTTAATGTTTC+GGG + chr4_3:36696777-36696796 Msa0639810:CDS 40.0%
AAATTACGAACAGCAGCAGT+TGG - chr4_3:36696828-36696847 None:intergenic 40.0%
AACTGCTGCTGTTCGTAATT+TGG + chr4_3:36696827-36696846 Msa0639810:CDS 40.0%
GGACTACACTTTGATTCATG+TGG - chr4_3:36697695-36697714 None:intergenic 40.0%
AATGGCATGTTCTCTTGATC+AGG - chr4_3:36697716-36697735 None:intergenic 40.0%
TGAAGTGAATCAACGGCTAA+TGG - chr4_3:36697734-36697753 None:intergenic 40.0%
ATCTTGGCCGTCCAAATTAT+GGG + chr4_3:36697775-36697794 Msa0639810:CDS 40.0%
GAATTAGGCCAAAAGAGAAG+AGG - chr4_3:36697917-36697936 None:intergenic 40.0%
GACACAAGCATCCAAGAATT+AGG - chr4_3:36697932-36697951 None:intergenic 40.0%
TTGTGTCACGTGAAGAAGTT+AGG + chr4_3:36697945-36697964 Msa0639810:three_prime_UTR 40.0%
!! GTTCTGAAAAGCAGAGAAGA+AGG - chr4_3:36696093-36696112 None:intergenic 40.0%
! ATTTGGGTTTGGGTTTGAAC+CGG - chr4_3:36696408-36696427 None:intergenic 40.0%
! GAGTTTGCAGATTTGGGTTT+GGG - chr4_3:36696418-36696437 None:intergenic 40.0%
! ACGCATTTTTGTGAGTCATC+AGG - chr4_3:36696636-36696655 None:intergenic 40.0%
ACTCATAAGTGAGTCTTGCA+AGG - chr4_3:36696664-36696683 None:intergenic 40.0%
TCTGCTGCGTTTAATGTTTC+GGG + chr4_3:36696777-36696796 Msa0639810:CDS 40.0%
AAATTACGAACAGCAGCAGT+TGG - chr4_3:36696828-36696847 None:intergenic 40.0%
AACTGCTGCTGTTCGTAATT+TGG + chr4_3:36696827-36696846 Msa0639810:CDS 40.0%
GGACTACACTTTGATTCATG+TGG - chr4_3:36697695-36697714 None:intergenic 40.0%
AATGGCATGTTCTCTTGATC+AGG - chr4_3:36697716-36697735 None:intergenic 40.0%
TGAAGTGAATCAACGGCTAA+TGG - chr4_3:36697734-36697753 None:intergenic 40.0%
ATCTTGGCCGTCCAAATTAT+GGG + chr4_3:36697775-36697794 Msa0639810:CDS 40.0%
GAATTAGGCCAAAAGAGAAG+AGG - chr4_3:36697917-36697936 None:intergenic 40.0%
GACACAAGCATCCAAGAATT+AGG - chr4_3:36697932-36697951 None:intergenic 40.0%
TTGTGTCACGTGAAGAAGTT+AGG + chr4_3:36697945-36697964 Msa0639810:three_prime_UTR 40.0%
GGTGTAGTGTAGTGTTTCTC+TGG - chr4_3:36696069-36696088 None:intergenic 45.0%
CTGAAAAGCAGAGAAGAAGG+TGG - chr4_3:36696090-36696109 None:intergenic 45.0%
GAGTTGAAGGAGATGGTGAT+GGG - chr4_3:36696176-36696195 None:intergenic 45.0%
TGTGTTGGAGTTGAAGGAGA+TGG - chr4_3:36696183-36696202 None:intergenic 45.0%
GAGTGAGGAGATGAAAAGGA+AGG - chr4_3:36696289-36696308 None:intergenic 45.0%
GAAGGAGTGAGGAGATGAAA+AGG - chr4_3:36696293-36696312 None:intergenic 45.0%
GAGTAGAAGAAGAAGGAGTG+AGG - chr4_3:36696304-36696323 None:intergenic 45.0%
ACAGTGGGAGTAGAAGAAGA+AGG - chr4_3:36696311-36696330 None:intergenic 45.0%
AACCTGCATGAGTGAACAGT+GGG - chr4_3:36696326-36696345 None:intergenic 45.0%
AAACCTGCATGAGTGAACAG+TGG - chr4_3:36696327-36696346 None:intergenic 45.0%
TGCAGGTTTACTCTCTCAAC+CGG + chr4_3:36696338-36696357 Msa0639810:CDS 45.0%
! TTTGGGTTTGGGTTTGAACC+GGG - chr4_3:36696407-36696426 None:intergenic 45.0%
! CGAGTTTGCAGATTTGGGTT+TGG - chr4_3:36696419-36696438 None:intergenic 45.0%
GAGGTCGAGTTTGCAGATTT+GGG - chr4_3:36696424-36696443 None:intergenic 45.0%
AGAGGTCGAGTTTGCAGATT+TGG - chr4_3:36696425-36696444 None:intergenic 45.0%
GCTCTCGAAATAACACCCAA+CGG + chr4_3:36696552-36696571 Msa0639810:CDS 45.0%
AGCCGGAGCAAATAATGCTT+CGG + chr4_3:36696575-36696594 Msa0639810:CDS 45.0%
! AGCCGAAGCATTATTTGCTC+CGG - chr4_3:36696580-36696599 None:intergenic 45.0%
AGTTGTTCTCCTGTTGAGGA+TGG - chr4_3:36696603-36696622 None:intergenic 45.0%
AGGAAGTTGTTCTCCTGTTG+AGG - chr4_3:36696607-36696626 None:intergenic 45.0%
TGTGAGTCATCAGGCAACAT+AGG - chr4_3:36696627-36696646 None:intergenic 45.0%
!! CACACGTTGCATTAGGTTGA+GGG - chr4_3:36696701-36696720 None:intergenic 45.0%
! TCACACGTTGCATTAGGTTG+AGG - chr4_3:36696702-36696721 None:intergenic 45.0%
ATCGCATCACACGTTGCATT+AGG - chr4_3:36696708-36696727 None:intergenic 45.0%
ATGTCTCTCTGCCCTACAAA+AGG + chr4_3:36696890-36696909 Msa0639810:CDS 45.0%
TGTGCAAGGTTCAAAGGTCT+TGG - chr4_3:36697230-36697249 None:intergenic 45.0%
TGCACGTAGAACTGCTGAAA+CGG - chr4_3:36697654-36697673 None:intergenic 45.0%
CATAATTTGGACGGCCAAGA+TGG - chr4_3:36697776-36697795 None:intergenic 45.0%
CATCTTGGCCGTCCAAATTA+TGG + chr4_3:36697774-36697793 Msa0639810:CDS 45.0%
AGAGAGAGAGAAGAAGAGGA+TGG - chr4_3:36697887-36697906 None:intergenic 45.0%
ACGTGAAGAAGTTAGGCTAG+TGG + chr4_3:36697952-36697971 Msa0639810:three_prime_UTR 45.0%
! CTAGTGGACAAAATCAGCAG+TGG + chr4_3:36697968-36697987 Msa0639810:three_prime_UTR 45.0%
GGTGTAGTGTAGTGTTTCTC+TGG - chr4_3:36696069-36696088 None:intergenic 45.0%
CTGAAAAGCAGAGAAGAAGG+TGG - chr4_3:36696090-36696109 None:intergenic 45.0%
GAGTTGAAGGAGATGGTGAT+GGG - chr4_3:36696176-36696195 None:intergenic 45.0%
TGTGTTGGAGTTGAAGGAGA+TGG - chr4_3:36696183-36696202 None:intergenic 45.0%
GAGTGAGGAGATGAAAAGGA+AGG - chr4_3:36696289-36696308 None:intergenic 45.0%
GAAGGAGTGAGGAGATGAAA+AGG - chr4_3:36696293-36696312 None:intergenic 45.0%
GAGTAGAAGAAGAAGGAGTG+AGG - chr4_3:36696304-36696323 None:intergenic 45.0%
ACAGTGGGAGTAGAAGAAGA+AGG - chr4_3:36696311-36696330 None:intergenic 45.0%
AACCTGCATGAGTGAACAGT+GGG - chr4_3:36696326-36696345 None:intergenic 45.0%
AAACCTGCATGAGTGAACAG+TGG - chr4_3:36696327-36696346 None:intergenic 45.0%
TGCAGGTTTACTCTCTCAAC+CGG + chr4_3:36696338-36696357 Msa0639810:CDS 45.0%
! TTTGGGTTTGGGTTTGAACC+GGG - chr4_3:36696407-36696426 None:intergenic 45.0%
! CGAGTTTGCAGATTTGGGTT+TGG - chr4_3:36696419-36696438 None:intergenic 45.0%
GAGGTCGAGTTTGCAGATTT+GGG - chr4_3:36696424-36696443 None:intergenic 45.0%
AGAGGTCGAGTTTGCAGATT+TGG - chr4_3:36696425-36696444 None:intergenic 45.0%
GCTCTCGAAATAACACCCAA+CGG + chr4_3:36696552-36696571 Msa0639810:CDS 45.0%
AGCCGGAGCAAATAATGCTT+CGG + chr4_3:36696575-36696594 Msa0639810:CDS 45.0%
! AGCCGAAGCATTATTTGCTC+CGG - chr4_3:36696580-36696599 None:intergenic 45.0%
AGTTGTTCTCCTGTTGAGGA+TGG - chr4_3:36696603-36696622 None:intergenic 45.0%
AGGAAGTTGTTCTCCTGTTG+AGG - chr4_3:36696607-36696626 None:intergenic 45.0%
TGTGAGTCATCAGGCAACAT+AGG - chr4_3:36696627-36696646 None:intergenic 45.0%
!! CACACGTTGCATTAGGTTGA+GGG - chr4_3:36696701-36696720 None:intergenic 45.0%
! TCACACGTTGCATTAGGTTG+AGG - chr4_3:36696702-36696721 None:intergenic 45.0%
ATCGCATCACACGTTGCATT+AGG - chr4_3:36696708-36696727 None:intergenic 45.0%
ATGTCTCTCTGCCCTACAAA+AGG + chr4_3:36696890-36696909 Msa0639810:CDS 45.0%
TGTGCAAGGTTCAAAGGTCT+TGG - chr4_3:36697230-36697249 None:intergenic 45.0%
TGCACGTAGAACTGCTGAAA+CGG - chr4_3:36697654-36697673 None:intergenic 45.0%
CATAATTTGGACGGCCAAGA+TGG - chr4_3:36697776-36697795 None:intergenic 45.0%
CATCTTGGCCGTCCAAATTA+TGG + chr4_3:36697774-36697793 Msa0639810:CDS 45.0%
AGAGAGAGAGAAGAAGAGGA+TGG - chr4_3:36697887-36697906 None:intergenic 45.0%
ACGTGAAGAAGTTAGGCTAG+TGG + chr4_3:36697952-36697971 Msa0639810:three_prime_UTR 45.0%
! CTAGTGGACAAAATCAGCAG+TGG + chr4_3:36697968-36697987 Msa0639810:three_prime_UTR 45.0%
!! AATTATTAAAAATATGAAAA+AGG - chr4_3:36697411-36697430 None:intergenic 5.0%
!! AATTATTAAAAATATGAAAA+AGG - chr4_3:36697411-36697430 None:intergenic 5.0%
!! TTGAAGGAGATGGTGATGGG+TGG - chr4_3:36696173-36696192 None:intergenic 50.0%
GGAGTTGAAGGAGATGGTGA+TGG - chr4_3:36696177-36696196 None:intergenic 50.0%
TTGGAGGATGGGTATGAACC+CGG - chr4_3:36696369-36696388 None:intergenic 50.0%
TTGGGTTTGAACCGGGAATG+CGG - chr4_3:36696400-36696419 None:intergenic 50.0%
! GTCTAGGTTTTTGCCGCATG+CGG - chr4_3:36696475-36696494 None:intergenic 50.0%
GAAATAACACCCAACGGAGC+CGG + chr4_3:36696558-36696577 Msa0639810:CDS 50.0%
TTATTTGCTCCGGCTCCGTT+GGG - chr4_3:36696570-36696589 None:intergenic 50.0%
ATTATTTGCTCCGGCTCCGT+TGG - chr4_3:36696571-36696590 None:intergenic 50.0%
CGTAGAACTGCTGAAACGGT+GGG - chr4_3:36697650-36697669 None:intergenic 50.0%
ACGTAGAACTGCTGAAACGG+TGG - chr4_3:36697651-36697670 None:intergenic 50.0%
AAAGTGGTCGTGCTCCATCT+TGG + chr4_3:36697759-36697778 Msa0639810:CDS 50.0%
!! TTGAAGGAGATGGTGATGGG+TGG - chr4_3:36696173-36696192 None:intergenic 50.0%
GGAGTTGAAGGAGATGGTGA+TGG - chr4_3:36696177-36696196 None:intergenic 50.0%
TTGGAGGATGGGTATGAACC+CGG - chr4_3:36696369-36696388 None:intergenic 50.0%
TTGGGTTTGAACCGGGAATG+CGG - chr4_3:36696400-36696419 None:intergenic 50.0%
! GTCTAGGTTTTTGCCGCATG+CGG - chr4_3:36696475-36696494 None:intergenic 50.0%
GAAATAACACCCAACGGAGC+CGG + chr4_3:36696558-36696577 Msa0639810:CDS 50.0%
TTATTTGCTCCGGCTCCGTT+GGG - chr4_3:36696570-36696589 None:intergenic 50.0%
ATTATTTGCTCCGGCTCCGT+TGG - chr4_3:36696571-36696590 None:intergenic 50.0%
CGTAGAACTGCTGAAACGGT+GGG - chr4_3:36697650-36697669 None:intergenic 50.0%
ACGTAGAACTGCTGAAACGG+TGG - chr4_3:36697651-36697670 None:intergenic 50.0%
AAAGTGGTCGTGCTCCATCT+TGG + chr4_3:36697759-36697778 Msa0639810:CDS 50.0%
CTCCCACTGTTCACTCATGC+AGG + chr4_3:36696321-36696340 Msa0639810:CDS 55.0%
ACTCTCTCAACCGGTCCAAC+CGG + chr4_3:36696347-36696366 Msa0639810:CDS 55.0%
AGGATGGGTATGAACCCGGT+TGG - chr4_3:36696365-36696384 None:intergenic 55.0%
TGGGTTTGAACCGGGAATGC+GGG - chr4_3:36696399-36696418 None:intergenic 55.0%
GACCTCTCCAACGAGCTCTT+CGG + chr4_3:36696438-36696457 Msa0639810:CDS 55.0%
AAAAGCCACGCGGCAAGAAC+CGG - chr4_3:36696513-36696532 None:intergenic 55.0%
CTCCCACTGTTCACTCATGC+AGG + chr4_3:36696321-36696340 Msa0639810:CDS 55.0%
ACTCTCTCAACCGGTCCAAC+CGG + chr4_3:36696347-36696366 Msa0639810:CDS 55.0%
AGGATGGGTATGAACCCGGT+TGG - chr4_3:36696365-36696384 None:intergenic 55.0%
TGGGTTTGAACCGGGAATGC+GGG - chr4_3:36696399-36696418 None:intergenic 55.0%
GACCTCTCCAACGAGCTCTT+CGG + chr4_3:36696438-36696457 Msa0639810:CDS 55.0%
AAAAGCCACGCGGCAAGAAC+CGG - chr4_3:36696513-36696532 None:intergenic 55.0%
CTCTCTCAACCGGTCCAACC+GGG + chr4_3:36696348-36696367 Msa0639810:CDS 60.0%
GGGTATGAACCCGGTTGGAC+CGG - chr4_3:36696360-36696379 None:intergenic 60.0%
CGGGGACTGTGTTGGAGGAT+GGG - chr4_3:36696380-36696399 None:intergenic 60.0%
GAATGCGGGGACTGTGTTGG+AGG - chr4_3:36696385-36696404 None:intergenic 60.0%
CAACACAGTCCCCGCATTCC+CGG + chr4_3:36696386-36696405 Msa0639810:CDS 60.0%
GGGTTTGAACCGGGAATGCG+GGG - chr4_3:36696398-36696417 None:intergenic 60.0%
CTCTCCAACGAGCTCTTCGG+CGG + chr4_3:36696441-36696460 Msa0639810:CDS 60.0%
GACAGCAACGACTGCGGTCT+AGG - chr4_3:36696491-36696510 None:intergenic 60.0%
AGACCGCAGTCGTTGCTGTC+CGG + chr4_3:36696491-36696510 Msa0639810:CDS 60.0%
GAACCGGACAGCAACGACTG+CGG - chr4_3:36696497-36696516 None:intergenic 60.0%
TTCGAGAGCCGAACGAGCGT+GGG - chr4_3:36696541-36696560 None:intergenic 60.0%
TTTCGAGAGCCGAACGAGCG+TGG - chr4_3:36696542-36696561 None:intergenic 60.0%
GCTTCGGCTCCATCCTCAAC+AGG + chr4_3:36696591-36696610 Msa0639810:CDS 60.0%
CTCTCTCAACCGGTCCAACC+GGG + chr4_3:36696348-36696367 Msa0639810:CDS 60.0%
GGGTATGAACCCGGTTGGAC+CGG - chr4_3:36696360-36696379 None:intergenic 60.0%
CGGGGACTGTGTTGGAGGAT+GGG - chr4_3:36696380-36696399 None:intergenic 60.0%
GAATGCGGGGACTGTGTTGG+AGG - chr4_3:36696385-36696404 None:intergenic 60.0%
CAACACAGTCCCCGCATTCC+CGG + chr4_3:36696386-36696405 Msa0639810:CDS 60.0%
GGGTTTGAACCGGGAATGCG+GGG - chr4_3:36696398-36696417 None:intergenic 60.0%
CTCTCCAACGAGCTCTTCGG+CGG + chr4_3:36696441-36696460 Msa0639810:CDS 60.0%
GACAGCAACGACTGCGGTCT+AGG - chr4_3:36696491-36696510 None:intergenic 60.0%
AGACCGCAGTCGTTGCTGTC+CGG + chr4_3:36696491-36696510 Msa0639810:CDS 60.0%
GAACCGGACAGCAACGACTG+CGG - chr4_3:36696497-36696516 None:intergenic 60.0%
TTCGAGAGCCGAACGAGCGT+GGG - chr4_3:36696541-36696560 None:intergenic 60.0%
TTTCGAGAGCCGAACGAGCG+TGG - chr4_3:36696542-36696561 None:intergenic 60.0%
GCTTCGGCTCCATCCTCAAC+AGG + chr4_3:36696591-36696610 Msa0639810:CDS 60.0%
GCGGGGACTGTGTTGGAGGA+TGG - chr4_3:36696381-36696400 None:intergenic 65.0%
CGGGAATGCGGGGACTGTGT+TGG - chr4_3:36696388-36696407 None:intergenic 65.0%
CGCCGAAGAGCTCGTTGGAG+AGG - chr4_3:36696443-36696462 None:intergenic 65.0%
TACGCCGCCGAAGAGCTCGT+TGG - chr4_3:36696448-36696467 None:intergenic 65.0%
GGCGGCGTAAAAGCCGCATG+CGG + chr4_3:36696459-36696478 Msa0639810:CDS 65.0%
TTTCGCCGCCCACGCTCGTT+CGG + chr4_3:36696530-36696549 Msa0639810:CDS 65.0%
GCGGGGACTGTGTTGGAGGA+TGG - chr4_3:36696381-36696400 None:intergenic 65.0%
CGGGAATGCGGGGACTGTGT+TGG - chr4_3:36696388-36696407 None:intergenic 65.0%
CGCCGAAGAGCTCGTTGGAG+AGG - chr4_3:36696443-36696462 None:intergenic 65.0%
TACGCCGCCGAAGAGCTCGT+TGG - chr4_3:36696448-36696467 None:intergenic 65.0%
GGCGGCGTAAAAGCCGCATG+CGG + chr4_3:36696459-36696478 Msa0639810:CDS 65.0%
TTTCGCCGCCCACGCTCGTT+CGG + chr4_3:36696530-36696549 Msa0639810:CDS 65.0%
GCTGTCCGGTTCTTGCCGCG+TGG + chr4_3:36696505-36696524 Msa0639810:CDS 70.0%
GTGGGCGGCGAAAAGCCACG+CGG - chr4_3:36696523-36696542 None:intergenic 70.0%
GAGAGCCGAACGAGCGTGGG+CGG - chr4_3:36696538-36696557 None:intergenic 70.0%
GCTGTCCGGTTCTTGCCGCG+TGG + chr4_3:36696505-36696524 Msa0639810:CDS 70.0%
GTGGGCGGCGAAAAGCCACG+CGG - chr4_3:36696523-36696542 None:intergenic 70.0%
GAGAGCCGAACGAGCGTGGG+CGG - chr4_3:36696538-36696557 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 36696019 36698286 36696019 ID=Msa0639810;Name=Msa0639810
chr4_3 mRNA 36696019 36698286 36696019 ID=Msa0639810-mRNA-1;Parent=Msa0639810;Name=Msa0639810-mRNA-1;_AED=0.25;_eAED=0.25;_QI=251|1|1|1|1|1|2|445|318
chr4_3 exon 36696019 36696911 36696019 ID=Msa0639810-mRNA-1:exon:8470;Parent=Msa0639810-mRNA-1
chr4_3 exon 36697527 36698286 36697527 ID=Msa0639810-mRNA-1:exon:8471;Parent=Msa0639810-mRNA-1
chr4_3 five_prime_UTR 36696019 36696269 36696019 ID=Msa0639810-mRNA-1:five_prime_utr;Parent=Msa0639810-mRNA-1
chr4_3 CDS 36696270 36696911 36696270 ID=Msa0639810-mRNA-1:cds;Parent=Msa0639810-mRNA-1
chr4_3 CDS 36697527 36697841 36697527 ID=Msa0639810-mRNA-1:cds;Parent=Msa0639810-mRNA-1
chr4_3 three_prime_UTR 36697842 36698286 36697842 ID=Msa0639810-mRNA-1:three_prime_utr;Parent=Msa0639810-mRNA-1
Gene Sequence

>Msa0639810

ATGCAATCATTCACATCCTTCCTTTTCATCTCCTCACTCCTTCTTCTTCTACTCCCACTGTTCACTCATGCAGGTTTACTCTCTCAACCGGTCCAACCGGGTTCATACCCATCCTCCAACACAGTCCCCGCATTCCCGGTTCAAACCCAAACCCAAATCTGCAAACTCGACCTCTCCAACGAGCTCTTCGGCGGCGTAAAAGCCGCATGCGGCAAAAACCTAGACCGCAGTCGTTGCTGTCCGGTTCTTGCCGCGTGGCTTTTCGCCGCCCACGCTCGTTCGGCTCTCGAAATAACACCCAACGGAGCCGGAGCAAATAATGCTTCGGCTCCATCCTCAACAGGAGAACAACTTCCTATGTTGCCTGATGACTCACAAAAATGCGTAAATTCCTTGCAAGACTCACTTATGAGTCGAAATATTCGAATCCCTCAACCTAATGCAACGTGTGATGCGATTCTTTGTTTTTGTGGTATTAGGTTACATCAAATAAGCTCATTGTCTTGTTCTGCTGCGTTTAATGTTTCGGGTTCGCATAAAAATGCTGCTGCTACTCCAACTGCTGCTGTTCGTAATTTGGAAAATAATTGTCGTAATGCTTCTTATCAAGGTTGCACTAAATGTCTCTCTGCCCTACAAAAGGTGAAGAGTTACAAAAATGCTACAAAGGGAGCTAGTGAAAGAGTTAAGAAGATGTTTAACAGAGATTGTGAACTAATGGGTTTAACATGGTTACTAGCAAAGAACAAAACGACATACATACCCACCGTTTCAGCAGTTCTACGTGCAATGATGTATAGTGCACACCCACATGAATCAAAGTGTAGTCCTGATCAAGAGAACATGCCATTAGCCGTTGATTCACTTCAATTTGAAAGTGGTCGTGCTCCATCTTGGCCGTCCAAATTATGGGCTACTATATTAACTTTAATCATGTTATTTTGTTCTTTTGTTTAA
Protein sequence

>Msa0639810

MQSFTSFLFISSLLLLLLPLFTHAGLLSQPVQPGSYPSSNTVPAFPVQTQTQICKLDLSNELFGGVKAACGKNLDRSRCCPVLAAWLFAAHARSALEITPNGAGANNASAPSSTGEQLPMLPDDSQKCVNSLQDSLMSRNIRIPQPNATCDAILCFCGIRLHQISSLSCSAAFNVSGSHKNAAATPTAAVRNLENNCRNASYQGCTKCLSALQKVKSYKNATKGASERVKKMFNRDCELMGLTWLLAKNKTTYIPTVSAVLRAMMYSAHPHESKCSPDQENMPLAVDSLQFESGRAPSWPSKLWATILTLIMLFCSFV*