Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601810 | XP_013455996.1 | 95.604 | 273 | 12 | 0 | 1 | 273 | 1 | 273 | 0.0 | 536 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601810 | sp|Q9X248|FABG_THEMA | 35.433 | 254 | 154 | 6 | 11 | 264 | 3 | 246 | 1.81e-38 | 138 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601810 | I3T7Z9 | 95.604 | 273 | 12 | 0 | 1 | 273 | 1 | 273 | 0.0 | 536 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0601810 | Msa0642940 | 0.801651 | 8.141334e-49 | -8.615850e-47 |
| Msa0601810 | Msa1082290 | 0.807502 | 4.898582e-50 | -8.615850e-47 |
| Msa0601810 | Msa1421460 | 0.802873 | 4.563084e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601810 | MtrunA17_Chr4g0028921 | 95.604 | 273 | 12 | 0 | 1 | 273 | 1 | 273 | 0.0 | 536 |
| Msa0601810 | MtrunA17_Chr4g0028911 | 93.773 | 273 | 17 | 0 | 1 | 273 | 1 | 273 | 0.0 | 527 |
| Msa0601810 | MtrunA17_Chr1g0171831 | 70.472 | 254 | 70 | 1 | 4 | 252 | 7 | 260 | 1.49e-130 | 370 |
| Msa0601810 | MtrunA17_Chr3g0122901 | 32.692 | 260 | 165 | 6 | 6 | 264 | 70 | 320 | 3.72e-32 | 120 |
| Msa0601810 | MtrunA17_Chr1g0146811 | 31.349 | 252 | 171 | 2 | 14 | 264 | 6 | 256 | 1.79e-30 | 114 |
| Msa0601810 | MtrunA17_Chr4g0025971 | 32.222 | 270 | 157 | 8 | 11 | 270 | 14 | 267 | 2.49e-27 | 106 |
| Msa0601810 | MtrunA17_Chr4g0026001 | 33.080 | 263 | 164 | 7 | 11 | 270 | 14 | 267 | 7.98e-27 | 105 |
| Msa0601810 | MtrunA17_Chr3g0112171 | 30.769 | 260 | 167 | 9 | 11 | 267 | 15 | 264 | 1.93e-26 | 104 |
| Msa0601810 | MtrunA17_Chr3g0112151 | 30.268 | 261 | 169 | 9 | 10 | 267 | 85 | 335 | 8.66e-25 | 101 |
| Msa0601810 | MtrunA17_Chr4g0025981 | 30.534 | 262 | 170 | 7 | 13 | 271 | 43 | 295 | 3.75e-24 | 99.4 |
| Msa0601810 | MtrunA17_Chr3g0112141 | 30.385 | 260 | 168 | 10 | 11 | 267 | 17 | 266 | 3.78e-24 | 98.2 |
| Msa0601810 | MtrunA17_Chr4g0044131 | 31.439 | 264 | 164 | 7 | 1 | 261 | 4 | 253 | 5.68e-24 | 97.8 |
| Msa0601810 | MtrunA17_Chr3g0112261 | 29.119 | 261 | 172 | 9 | 10 | 267 | 18 | 268 | 1.71e-23 | 96.7 |
| Msa0601810 | MtrunA17_Chr2g0324021 | 30.153 | 262 | 160 | 5 | 9 | 261 | 4 | 251 | 2.01e-23 | 96.3 |
| Msa0601810 | MtrunA17_Chr7g0270451 | 32.308 | 260 | 157 | 7 | 9 | 261 | 4 | 251 | 2.32e-23 | 95.9 |
| Msa0601810 | MtrunA17_Chr7g0270441 | 29.304 | 273 | 149 | 8 | 9 | 261 | 4 | 252 | 8.03e-23 | 94.4 |
| Msa0601810 | MtrunA17_Chr3g0112271 | 31.034 | 261 | 167 | 11 | 10 | 267 | 16 | 266 | 9.77e-23 | 94.4 |
| Msa0601810 | MtrunA17_Chr6g0459261 | 26.744 | 258 | 172 | 6 | 11 | 261 | 25 | 272 | 1.15e-22 | 94.4 |
| Msa0601810 | MtrunA17_Chr7g0239491 | 29.297 | 256 | 171 | 6 | 11 | 263 | 15 | 263 | 5.44e-22 | 92.4 |
| Msa0601810 | MtrunA17_Chr4g0032141 | 28.846 | 260 | 172 | 9 | 11 | 267 | 56 | 305 | 2.35e-21 | 91.3 |
| Msa0601810 | MtrunA17_Chr6g0459281 | 29.020 | 255 | 154 | 8 | 11 | 253 | 13 | 252 | 6.53e-21 | 89.4 |
| Msa0601810 | MtrunA17_Chr7g0239481 | 28.682 | 258 | 173 | 6 | 11 | 264 | 15 | 265 | 9.56e-21 | 89.0 |
| Msa0601810 | MtrunA17_Chr3g0124471 | 33.000 | 200 | 119 | 7 | 9 | 206 | 24 | 210 | 1.49e-20 | 89.0 |
| Msa0601810 | MtrunA17_Chr7g0239511 | 29.344 | 259 | 170 | 8 | 11 | 264 | 16 | 266 | 7.12e-20 | 86.7 |
| Msa0601810 | MtrunA17_Chr6g0459331 | 26.255 | 259 | 172 | 6 | 11 | 261 | 13 | 260 | 1.35e-19 | 85.9 |
| Msa0601810 | MtrunA17_Chr7g0252031 | 29.771 | 262 | 166 | 7 | 11 | 263 | 35 | 287 | 3.04e-19 | 85.5 |
| Msa0601810 | MtrunA17_Chr7g0259521 | 29.924 | 264 | 161 | 11 | 7 | 261 | 5 | 253 | 3.05e-19 | 84.7 |
| Msa0601810 | MtrunA17_Chr1g0191751 | 27.881 | 269 | 176 | 6 | 6 | 266 | 96 | 354 | 3.67e-19 | 85.9 |
| Msa0601810 | MtrunA17_Chr7g0259531 | 28.736 | 261 | 174 | 8 | 4 | 261 | 7 | 258 | 3.80e-19 | 84.3 |
| Msa0601810 | MtrunA17_Chr4g0040371 | 29.779 | 272 | 170 | 7 | 2 | 263 | 11 | 271 | 8.77e-19 | 84.0 |
| Msa0601810 | MtrunA17_Chr7g0239501 | 29.070 | 258 | 172 | 8 | 11 | 264 | 16 | 266 | 1.68e-18 | 82.8 |
| Msa0601810 | MtrunA17_Chr7g0244061 | 30.935 | 278 | 155 | 10 | 11 | 263 | 29 | 294 | 2.76e-18 | 82.8 |
| Msa0601810 | MtrunA17_Chr7g0267011 | 32.461 | 191 | 120 | 5 | 11 | 200 | 8 | 190 | 2.88e-18 | 80.5 |
| Msa0601810 | MtrunA17_Chr7g0267001 | 29.658 | 263 | 152 | 8 | 1 | 261 | 4 | 235 | 4.82e-18 | 81.3 |
| Msa0601810 | MtrunA17_Chr7g0239451 | 26.119 | 268 | 183 | 7 | 4 | 263 | 5 | 265 | 1.21e-17 | 80.5 |
| Msa0601810 | MtrunA17_Chr4g0074511 | 27.881 | 269 | 165 | 9 | 7 | 261 | 36 | 289 | 2.00e-17 | 80.1 |
| Msa0601810 | MtrunA17_Chr3g0084871 | 29.889 | 271 | 164 | 8 | 7 | 263 | 12 | 270 | 2.79e-17 | 79.7 |
| Msa0601810 | MtrunA17_Chr3g0124481 | 34.857 | 175 | 100 | 6 | 33 | 206 | 34 | 195 | 4.24e-17 | 79.3 |
| Msa0601810 | MtrunA17_Chr8g0357481 | 28.958 | 259 | 168 | 8 | 11 | 261 | 14 | 264 | 4.88e-17 | 79.3 |
| Msa0601810 | MtrunA17_Chr6g0459351 | 26.400 | 250 | 167 | 7 | 11 | 253 | 13 | 252 | 7.70e-17 | 78.2 |
| Msa0601810 | MtrunA17_Chr8g0355281 | 29.744 | 195 | 131 | 4 | 16 | 206 | 74 | 266 | 1.27e-16 | 78.6 |
| Msa0601810 | MtrunA17_Chr7g0272961 | 24.354 | 271 | 179 | 7 | 6 | 264 | 35 | 291 | 2.08e-16 | 77.4 |
| Msa0601810 | MtrunA17_Chr7g0266981 | 29.818 | 275 | 170 | 9 | 6 | 270 | 8 | 269 | 2.15e-16 | 77.0 |
| Msa0601810 | MtrunA17_Chr8g0386201 | 29.000 | 200 | 135 | 5 | 9 | 208 | 43 | 235 | 5.72e-16 | 76.6 |
| Msa0601810 | MtrunA17_Chr6g0459271 | 25.197 | 254 | 181 | 5 | 11 | 261 | 13 | 260 | 6.81e-16 | 75.5 |
| Msa0601810 | MtrunA17_Chr4g0075531 | 27.376 | 263 | 169 | 9 | 5 | 261 | 1 | 247 | 8.01e-16 | 75.1 |
| Msa0601810 | MtrunA17_Chr7g0249571 | 29.703 | 202 | 136 | 4 | 1 | 200 | 28 | 225 | 9.53e-16 | 75.9 |
| Msa0601810 | MtrunA17_Chr0c30g0494101 | 27.509 | 269 | 164 | 9 | 7 | 261 | 36 | 287 | 1.00e-15 | 75.5 |
| Msa0601810 | MtrunA17_Chr4g0044111 | 29.455 | 275 | 171 | 9 | 6 | 270 | 8 | 269 | 1.07e-15 | 75.1 |
| Msa0601810 | MtrunA17_Chr3g0123251 | 30.000 | 190 | 126 | 4 | 13 | 199 | 53 | 238 | 1.29e-15 | 75.5 |
| Msa0601810 | MtrunA17_Chr6g0459301 | 25.385 | 260 | 173 | 7 | 11 | 261 | 14 | 261 | 2.22e-15 | 73.9 |
| Msa0601810 | MtrunA17_Chr7g0266891 | 29.304 | 273 | 170 | 9 | 8 | 270 | 4 | 263 | 2.39e-15 | 73.9 |
| Msa0601810 | MtrunA17_Chr7g0268591 | 28.517 | 263 | 171 | 8 | 9 | 263 | 31 | 284 | 3.10e-15 | 73.9 |
| Msa0601810 | MtrunA17_Chr4g0054341 | 29.952 | 207 | 130 | 7 | 14 | 215 | 5 | 201 | 4.96e-15 | 73.2 |
| Msa0601810 | MtrunA17_Chr6g0485711 | 25.463 | 216 | 146 | 4 | 5 | 206 | 172 | 386 | 9.28e-15 | 73.9 |
| Msa0601810 | MtrunA17_Chr4g0032181 | 25.907 | 193 | 138 | 4 | 72 | 264 | 60 | 247 | 8.37e-14 | 69.3 |
| Msa0601810 | MtrunA17_Chr8g0381191 | 27.461 | 193 | 127 | 4 | 13 | 199 | 47 | 232 | 4.31e-13 | 68.2 |
| Msa0601810 | MtrunA17_Chr4g0045041 | 27.536 | 207 | 131 | 7 | 12 | 206 | 5 | 204 | 2.06e-12 | 67.0 |
| Msa0601810 | MtrunA17_Chr7g0262941 | 24.910 | 277 | 178 | 8 | 2 | 257 | 23 | 290 | 4.18e-12 | 65.5 |
| Msa0601810 | MtrunA17_Chr4g0045061 | 29.327 | 208 | 126 | 8 | 12 | 206 | 5 | 204 | 7.79e-12 | 65.1 |
| Msa0601810 | MtrunA17_Chr1g0202861 | 29.098 | 244 | 146 | 8 | 2 | 224 | 59 | 296 | 9.60e-12 | 64.3 |
| Msa0601810 | MtrunA17_Chr4g0076931 | 28.000 | 200 | 136 | 6 | 9 | 206 | 4 | 197 | 1.62e-11 | 62.8 |
| Msa0601810 | MtrunA17_Chr6g0463951 | 26.744 | 172 | 112 | 3 | 97 | 261 | 1 | 165 | 1.71e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601810 | AT3G55290.1 | 67.647 | 272 | 86 | 2 | 3 | 273 | 10 | 280 | 4.99e-136 | 385 |
| Msa0601810 | AT3G55290.2 | 67.647 | 272 | 86 | 2 | 3 | 273 | 9 | 279 | 7.80e-136 | 385 |
| Msa0601810 | AT3G46170.1 | 65.809 | 272 | 91 | 2 | 3 | 273 | 18 | 288 | 2.80e-132 | 376 |
| Msa0601810 | AT3G55310.1 | 65.441 | 272 | 92 | 2 | 3 | 273 | 9 | 279 | 3.23e-132 | 375 |
| Msa0601810 | AT1G62610.2 | 64.103 | 273 | 95 | 2 | 3 | 273 | 5 | 276 | 7.32e-130 | 369 |
| Msa0601810 | AT1G62610.4 | 64.103 | 273 | 95 | 2 | 3 | 273 | 11 | 282 | 7.75e-130 | 370 |
| Msa0601810 | AT1G62610.3 | 64.103 | 273 | 95 | 2 | 3 | 273 | 7 | 278 | 7.77e-130 | 369 |
| Msa0601810 | AT1G62610.1 | 64.103 | 273 | 95 | 2 | 3 | 273 | 6 | 277 | 8.19e-130 | 369 |
| Msa0601810 | AT1G63380.3 | 63.370 | 273 | 97 | 2 | 3 | 273 | 7 | 278 | 9.71e-130 | 369 |
| Msa0601810 | AT1G63380.4 | 63.370 | 273 | 97 | 2 | 3 | 273 | 11 | 282 | 1.03e-129 | 369 |
| Msa0601810 | AT1G63380.1 | 63.370 | 273 | 97 | 2 | 3 | 273 | 9 | 280 | 1.34e-129 | 369 |
| Msa0601810 | AT1G63380.2 | 63.370 | 273 | 97 | 2 | 3 | 273 | 14 | 285 | 2.26e-129 | 369 |
| Msa0601810 | AT2G17845.1 | 66.292 | 267 | 87 | 2 | 10 | 273 | 46 | 312 | 9.66e-128 | 365 |
| Msa0601810 | AT3G01980.1 | 32.677 | 254 | 168 | 3 | 13 | 264 | 5 | 257 | 5.46e-41 | 142 |
| Msa0601810 | AT3G01980.4 | 32.677 | 254 | 168 | 3 | 13 | 264 | 5 | 257 | 5.46e-41 | 142 |
| Msa0601810 | AT3G01980.5 | 34.562 | 217 | 140 | 2 | 50 | 264 | 17 | 233 | 8.04e-39 | 136 |
| Msa0601810 | AT3G01980.3 | 29.225 | 284 | 168 | 4 | 13 | 264 | 5 | 287 | 1.70e-34 | 126 |
| Msa0601810 | AT1G24360.1 | 31.154 | 260 | 163 | 8 | 6 | 261 | 69 | 316 | 7.92e-29 | 112 |
| Msa0601810 | AT5G06060.1 | 32.950 | 261 | 162 | 9 | 10 | 267 | 8 | 258 | 2.73e-28 | 109 |
| Msa0601810 | AT3G01980.6 | 32.571 | 175 | 115 | 3 | 13 | 185 | 5 | 178 | 2.07e-25 | 99.8 |
| Msa0601810 | AT2G29150.1 | 29.670 | 273 | 177 | 8 | 1 | 267 | 1 | 264 | 1.66e-23 | 96.7 |
| Msa0601810 | AT3G51680.1 | 30.797 | 276 | 160 | 8 | 9 | 263 | 30 | 295 | 5.61e-23 | 95.9 |
| Msa0601810 | AT3G26770.1 | 29.137 | 278 | 170 | 9 | 9 | 271 | 39 | 304 | 1.95e-22 | 94.7 |
| Msa0601810 | AT2G29370.1 | 28.727 | 275 | 182 | 8 | 1 | 269 | 1 | 267 | 2.28e-21 | 90.9 |
| Msa0601810 | AT2G29260.1 | 28.788 | 264 | 176 | 9 | 6 | 267 | 64 | 317 | 4.00e-21 | 91.3 |
| Msa0601810 | AT2G29350.1 | 28.295 | 258 | 175 | 7 | 11 | 267 | 15 | 263 | 4.79e-21 | 90.1 |
| Msa0601810 | AT5G18210.1 | 29.688 | 256 | 168 | 10 | 10 | 259 | 7 | 256 | 7.11e-21 | 89.7 |
| Msa0601810 | AT5G65205.1 | 35.567 | 194 | 110 | 7 | 15 | 206 | 10 | 190 | 1.19e-20 | 89.4 |
| Msa0601810 | AT3G47360.1 | 31.500 | 200 | 130 | 5 | 8 | 207 | 42 | 234 | 2.90e-20 | 88.6 |
| Msa0601810 | AT4G13180.1 | 30.588 | 255 | 166 | 8 | 11 | 261 | 13 | 260 | 3.68e-20 | 87.8 |
| Msa0601810 | AT5G10050.1 | 34.021 | 194 | 113 | 7 | 15 | 206 | 9 | 189 | 5.52e-20 | 87.4 |
| Msa0601810 | AT3G26760.1 | 27.444 | 266 | 173 | 5 | 9 | 263 | 34 | 290 | 7.16e-20 | 87.4 |
| Msa0601810 | AT2G29360.1 | 29.197 | 274 | 178 | 10 | 1 | 267 | 1 | 265 | 1.29e-19 | 86.3 |
| Msa0601810 | AT1G07440.1 | 28.253 | 269 | 178 | 10 | 2 | 267 | 4 | 260 | 1.70e-19 | 85.9 |
| Msa0601810 | AT1G52340.1 | 29.323 | 266 | 171 | 6 | 9 | 263 | 16 | 275 | 2.94e-19 | 85.5 |
| Msa0601810 | AT1G54870.2 | 27.509 | 269 | 173 | 8 | 6 | 264 | 79 | 335 | 3.02e-19 | 86.3 |
| Msa0601810 | AT1G54870.1 | 27.509 | 269 | 173 | 8 | 6 | 264 | 77 | 333 | 3.57e-19 | 86.3 |
| Msa0601810 | AT2G29290.2 | 26.459 | 257 | 182 | 5 | 11 | 267 | 7 | 256 | 6.01e-19 | 84.3 |
| Msa0601810 | AT3G03980.1 | 28.253 | 269 | 171 | 10 | 6 | 261 | 9 | 268 | 3.02e-18 | 82.4 |
| Msa0601810 | AT1G67730.1 | 31.100 | 209 | 135 | 5 | 5 | 208 | 41 | 245 | 3.79e-18 | 82.8 |
| Msa0601810 | AT2G30670.1 | 26.744 | 258 | 180 | 7 | 11 | 267 | 7 | 256 | 6.76e-18 | 81.3 |
| Msa0601810 | AT3G47350.1 | 28.846 | 208 | 141 | 5 | 8 | 215 | 41 | 241 | 6.79e-18 | 82.0 |
| Msa0601810 | AT3G47350.2 | 28.846 | 208 | 141 | 5 | 8 | 215 | 41 | 241 | 7.15e-18 | 82.4 |
| Msa0601810 | AT1G49670.2 | 31.884 | 207 | 120 | 7 | 17 | 210 | 10 | 208 | 1.33e-17 | 82.8 |
| Msa0601810 | AT1G49670.1 | 31.884 | 207 | 120 | 7 | 17 | 210 | 10 | 208 | 1.62e-17 | 82.4 |
| Msa0601810 | AT5G18210.2 | 30.165 | 242 | 157 | 10 | 11 | 246 | 8 | 243 | 2.14e-17 | 80.1 |
| Msa0601810 | AT5G50590.1 | 30.769 | 221 | 137 | 9 | 9 | 223 | 43 | 253 | 5.57e-17 | 79.3 |
| Msa0601810 | AT5G50690.1 | 30.769 | 221 | 137 | 9 | 9 | 223 | 43 | 253 | 5.57e-17 | 79.3 |
| Msa0601810 | AT1G10310.1 | 30.612 | 196 | 128 | 5 | 11 | 206 | 15 | 202 | 6.79e-17 | 78.2 |
| Msa0601810 | AT5G50590.2 | 31.156 | 199 | 124 | 7 | 9 | 204 | 43 | 231 | 7.09e-17 | 78.6 |
| Msa0601810 | AT5G50690.2 | 31.156 | 199 | 124 | 7 | 9 | 204 | 43 | 231 | 7.09e-17 | 78.6 |
| Msa0601810 | AT2G47140.1 | 27.925 | 265 | 168 | 7 | 9 | 264 | 4 | 254 | 1.46e-16 | 77.8 |
| Msa0601810 | AT2G29310.1 | 28.137 | 263 | 170 | 10 | 11 | 267 | 7 | 256 | 1.86e-16 | 77.4 |
| Msa0601810 | AT3G05260.1 | 26.415 | 265 | 174 | 9 | 6 | 261 | 32 | 284 | 4.12e-16 | 77.0 |
| Msa0601810 | AT5G50700.1 | 31.683 | 202 | 127 | 7 | 9 | 208 | 43 | 235 | 4.32e-16 | 77.4 |
| Msa0601810 | AT5G50600.1 | 31.683 | 202 | 127 | 7 | 9 | 208 | 43 | 235 | 4.32e-16 | 77.4 |
| Msa0601810 | AT2G47130.1 | 26.923 | 260 | 172 | 5 | 11 | 264 | 6 | 253 | 4.94e-16 | 76.3 |
| Msa0601810 | AT3G42960.1 | 30.566 | 265 | 155 | 9 | 14 | 263 | 11 | 261 | 6.98e-16 | 75.9 |
| Msa0601810 | AT2G29350.3 | 29.379 | 177 | 117 | 6 | 92 | 267 | 56 | 225 | 7.23e-16 | 75.1 |
| Msa0601810 | AT2G47120.1 | 25.681 | 257 | 178 | 6 | 11 | 264 | 6 | 252 | 2.09e-15 | 74.3 |
| Msa0601810 | AT2G47120.2 | 25.681 | 257 | 178 | 6 | 11 | 264 | 7 | 253 | 2.10e-15 | 74.3 |
| Msa0601810 | AT2G29290.1 | 27.660 | 188 | 130 | 5 | 81 | 267 | 57 | 239 | 2.79e-15 | 73.9 |
| Msa0601810 | AT1G24470.1 | 27.895 | 190 | 128 | 4 | 13 | 199 | 52 | 235 | 3.21e-15 | 74.7 |
| Msa0601810 | AT3G29260.1 | 27.481 | 262 | 172 | 6 | 9 | 264 | 4 | 253 | 4.46e-15 | 73.6 |
| Msa0601810 | AT5G04900.1 | 28.205 | 195 | 133 | 5 | 16 | 206 | 82 | 273 | 8.40e-15 | 73.9 |
| Msa0601810 | AT5G61830.1 | 30.579 | 242 | 116 | 7 | 15 | 207 | 38 | 276 | 2.05e-14 | 72.4 |
| Msa0601810 | AT5G61830.2 | 30.579 | 242 | 116 | 7 | 15 | 207 | 38 | 276 | 2.05e-14 | 72.4 |
| Msa0601810 | AT3G29250.1 | 26.996 | 263 | 167 | 5 | 9 | 261 | 42 | 289 | 2.18e-14 | 72.0 |
| Msa0601810 | AT1G07450.1 | 25.769 | 260 | 179 | 9 | 11 | 267 | 8 | 256 | 2.56e-14 | 71.2 |
| Msa0601810 | AT2G29340.2 | 26.255 | 259 | 180 | 8 | 11 | 267 | 7 | 256 | 2.95e-14 | 71.2 |
| Msa0601810 | AT2G29340.1 | 26.255 | 259 | 180 | 8 | 11 | 267 | 7 | 256 | 4.73e-14 | 71.2 |
| Msa0601810 | AT3G29250.3 | 26.820 | 261 | 166 | 5 | 11 | 261 | 42 | 287 | 5.80e-14 | 70.9 |
| Msa0601810 | AT3G29250.2 | 26.820 | 261 | 166 | 5 | 11 | 261 | 6 | 251 | 7.40e-14 | 70.1 |
| Msa0601810 | AT2G29320.1 | 27.407 | 270 | 181 | 11 | 1 | 267 | 6 | 263 | 8.11e-14 | 70.1 |
| Msa0601810 | AT4G03140.1 | 28.947 | 266 | 166 | 9 | 9 | 263 | 76 | 329 | 5.20e-13 | 68.6 |
| Msa0601810 | AT3G04000.1 | 24.542 | 273 | 181 | 9 | 7 | 264 | 10 | 272 | 1.43e-12 | 66.6 |
| Msa0601810 | AT3G03330.1 | 28.351 | 194 | 134 | 3 | 9 | 200 | 39 | 229 | 1.74e-12 | 67.0 |
| Msa0601810 | AT2G29320.2 | 26.455 | 189 | 132 | 6 | 81 | 267 | 62 | 245 | 2.40e-12 | 65.9 |
| Msa0601810 | AT2G29350.2 | 27.941 | 204 | 139 | 5 | 11 | 213 | 15 | 211 | 3.81e-12 | 64.7 |
| Msa0601810 | AT2G29330.1 | 24.615 | 260 | 183 | 8 | 11 | 267 | 7 | 256 | 4.37e-12 | 65.1 |
| Msa0601810 | AT2G37540.1 | 27.239 | 268 | 164 | 10 | 10 | 256 | 30 | 287 | 4.79e-12 | 65.5 |
| Msa0601810 | AT5G50130.9 | 25.837 | 209 | 132 | 5 | 17 | 206 | 40 | 244 | 1.09e-11 | 63.9 |
| Msa0601810 | AT2G29300.1 | 25.385 | 260 | 182 | 8 | 11 | 267 | 7 | 257 | 2.00e-11 | 63.2 |
| Msa0601810 | AT5G50130.2 | 25.837 | 209 | 132 | 5 | 17 | 206 | 40 | 244 | 2.54e-11 | 63.5 |
| Msa0601810 | AT3G47350.3 | 38.000 | 100 | 60 | 2 | 8 | 107 | 41 | 138 | 3.03e-11 | 62.8 |
| Msa0601810 | AT5G50130.6 | 25.837 | 209 | 132 | 5 | 17 | 206 | 7 | 211 | 3.93e-11 | 62.8 |
| Msa0601810 | AT5G50130.8 | 25.837 | 209 | 132 | 5 | 17 | 206 | 7 | 211 | 5.50e-11 | 62.4 |
| Msa0601810 | AT5G50130.3 | 25.714 | 210 | 132 | 6 | 17 | 206 | 40 | 245 | 6.78e-11 | 61.6 |
| Msa0601810 | AT4G20760.2 | 27.106 | 273 | 161 | 10 | 13 | 265 | 63 | 317 | 7.46e-11 | 62.0 |
| Msa0601810 | AT2G29310.3 | 29.469 | 207 | 128 | 9 | 11 | 211 | 7 | 201 | 7.70e-11 | 60.5 |
| Msa0601810 | AT4G20760.1 | 27.106 | 273 | 161 | 10 | 13 | 265 | 43 | 297 | 8.21e-11 | 61.6 |
| Msa0601810 | AT5G51030.1 | 28.514 | 249 | 110 | 7 | 15 | 207 | 39 | 275 | 9.88e-11 | 61.6 |
Find 101 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGTGCCCCATTCTCTTAA+TGG | 0.197409 | 4_2:-44831481 | None:intergenic |
| AAATGAATGAATGTTGAAAA+TGG | 0.271617 | 4_2:-44827475 | None:intergenic |
| CAGAAGGCGTGGGAGGCTTT+TGG | 0.287795 | 4_2:+44827791 | Msa0601810:CDS |
| ATCAATATCTCTTCAATTGC+TGG | 0.294772 | 4_2:+44829480 | Msa0601810:CDS |
| ACAGGTGATGGCATTGGAAT+TGG | 0.295752 | 4_2:+44831348 | Msa0601810:intron |
| TGAATTTACTTCCAACTTCA+TGG | 0.304768 | 4_2:+44827360 | Msa0601810:five_prime_UTR |
| CAGGTGATGGCATTGGAATT+GGG | 0.309699 | 4_2:+44831349 | Msa0601810:intron |
| AAATGGGAATGGGAAATTTC+GGG | 0.315709 | 4_2:-44827435 | None:intergenic |
| AAAATGGGAATGGGAAATTT+CGG | 0.317186 | 4_2:-44827436 | None:intergenic |
| ATTCATAGTGAGGAATAAAT+AGG | 0.326565 | 4_2:-44831610 | None:intergenic |
| GCAGAAATCACTGCCGATTC+CGG | 0.359981 | 4_2:-44827606 | None:intergenic |
| AAAATTTGATGAAGAAAGAT+TGG | 0.382710 | 4_2:+44831431 | Msa0601810:CDS |
| AATGAATGAATGTTGAAAAT+GGG | 0.385715 | 4_2:-44827474 | None:intergenic |
| ATCAATAATGCCGGTGTTAG+AGG | 0.395800 | 4_2:+44827830 | Msa0601810:CDS |
| AACAGTGCCATTAAGAGAAT+GGG | 0.402159 | 4_2:+44831474 | Msa0601810:CDS |
| GAACCATGGCAGGACCTTGC+CGG | 0.409758 | 4_2:+44827554 | Msa0601810:CDS |
| GATGCTGGTGCTACCTTACC+AGG | 0.410122 | 4_2:+44831583 | Msa0601810:CDS |
| GGAAATTTCGGGGAATGGAT+TGG | 0.411214 | 4_2:-44827424 | None:intergenic |
| TGCCTTGATCTCGCTCGTGC+AGG | 0.424051 | 4_2:+44827626 | Msa0601810:CDS |
| ATGGTTTATGAAAATGGGAA+TGG | 0.425486 | 4_2:-44827446 | None:intergenic |
| CTCGTCACCGGCGCATCAGC+CGG | 0.431826 | 4_2:+44827587 | Msa0601810:CDS |
| GAGCTTGATGTGGCGGCTGA+TGG | 0.434808 | 4_2:+44827746 | Msa0601810:CDS |
| GTGTTTAAAACAAACATAAC+AGG | 0.436559 | 4_2:+44829393 | Msa0601810:CDS |
| TTCTCATGGTTACTAATCTA+CGG | 0.453300 | 4_2:+44831720 | Msa0601810:three_prime_UTR |
| GGTGACGAGGACAACTTTGC+CGG | 0.466606 | 4_2:-44827573 | None:intergenic |
| CGAGCAATTGATGTTAATGC+TGG | 0.468893 | 4_2:-44831508 | None:intergenic |
| TGGTTTATGAAAATGGGAAT+GGG | 0.475712 | 4_2:-44827445 | None:intergenic |
| GCCGATTCCGGCTGATGCGC+CGG | 0.475963 | 4_2:-44827594 | None:intergenic |
| ATTTCAGATTTGAAAAGTCC+TGG | 0.476294 | 4_2:-44831403 | None:intergenic |
| ACCGGCGCATCAGCCGGAAT+CGG | 0.476467 | 4_2:+44827593 | Msa0601810:CDS |
| GAATGGGAAATTTCGGGGAA+TGG | 0.481899 | 4_2:-44827429 | None:intergenic |
| TTCAATTGCTGGCCTAGAGA+GGG | 0.482491 | 4_2:+44829491 | Msa0601810:CDS |
| TCGGGGAATGGATTGGAAAG+TGG | 0.486427 | 4_2:-44827417 | None:intergenic |
| TCTTAATGGCACTGTTCTCA+TGG | 0.487179 | 4_2:-44831467 | None:intergenic |
| GAACAGTGCCATTAAGAGAA+TGG | 0.491704 | 4_2:+44831473 | Msa0601810:CDS |
| GGCAAAGTTGTCCTCGTCAC+CGG | 0.492993 | 4_2:+44827575 | Msa0601810:CDS |
| CTTGATGTGGCGGCTGATGG+TGG | 0.496263 | 4_2:+44827749 | Msa0601810:CDS |
| GATGATTGATTTGGTGTTGG+TGG | 0.496340 | 4_2:-44827389 | None:intergenic |
| AAGGATGATTGATTTGGTGT+TGG | 0.500947 | 4_2:-44827392 | None:intergenic |
| GTGGTGAAGGATGATTGATT+TGG | 0.502521 | 4_2:-44827398 | None:intergenic |
| ATCCTGCACGAGCGAGATCA+AGG | 0.509363 | 4_2:-44827628 | None:intergenic |
| AATATATTTATTGCTGATGC+TGG | 0.511627 | 4_2:+44831568 | Msa0601810:CDS |
| GAGGAATAAATAGGAAAGCC+TGG | 0.518416 | 4_2:-44831601 | None:intergenic |
| AAAATATGATGAGTGAAACT+TGG | 0.523161 | 4_2:+44831662 | Msa0601810:three_prime_UTR |
| GATTCTTCTGAATATGTGAC+AGG | 0.524490 | 4_2:+44831544 | Msa0601810:CDS |
| CGAGGACAACTTTGCCGGCA+AGG | 0.527336 | 4_2:-44827568 | None:intergenic |
| TGGAATTGACTGAGGAGGAA+TGG | 0.528283 | 4_2:+44829364 | Msa0601810:CDS |
| AGAAGTATGTACAGAAGGCG+TGG | 0.537432 | 4_2:+44827780 | Msa0601810:CDS |
| AGGTGATGGCATTGGAATTG+GGG | 0.543621 | 4_2:+44831350 | Msa0601810:intron |
| TATAGAGAAGTATGTACAGA+AGG | 0.544134 | 4_2:+44827775 | Msa0601810:CDS |
| CTTCAATTGCTGGCCTAGAG+AGG | 0.544592 | 4_2:+44829490 | Msa0601810:CDS |
| TCTCATGGTTACTAATCTAC+GGG | 0.552473 | 4_2:+44831721 | Msa0601810:three_prime_UTR |
| AGGAAATGTGAGTTCACCCT+TGG | 0.553066 | 4_2:+44829344 | Msa0601810:intron |
| AAGTCTCCGTGCCATTGCGG+TGG | 0.559272 | 4_2:+44827724 | Msa0601810:CDS |
| AATGGATTGGAAAGTGGTGA+AGG | 0.560052 | 4_2:-44827411 | None:intergenic |
| ATAAATAGGAAAGCCTGGTA+AGG | 0.560891 | 4_2:-44831596 | None:intergenic |
| ACAAGCGTATGCAGTTCCAC+CGG | 0.561319 | 4_2:-44829523 | None:intergenic |
| TTCCTCCTCAGTCAATTCCA+AGG | 0.561664 | 4_2:-44829361 | None:intergenic |
| ATTCAAATTACCTCTAACAC+CGG | 0.563895 | 4_2:-44827840 | None:intergenic |
| CAAGCGTATGCAGTTCCACC+GGG | 0.568839 | 4_2:-44829522 | None:intergenic |
| CATGAGTTAAGATGTTCTCA+TGG | 0.569138 | 4_2:+44831706 | Msa0601810:three_prime_UTR |
| AAACAAACATAACAGGTACA+TGG | 0.571916 | 4_2:+44829400 | Msa0601810:CDS |
| CACATCAAGCTCCACCGCAA+TGG | 0.574794 | 4_2:-44827735 | None:intergenic |
| GAAGTATGTACAGAAGGCGT+GGG | 0.575488 | 4_2:+44827781 | Msa0601810:CDS |
| GATGAAATCAATGGAAAGGA+GGG | 0.578092 | 4_2:+44827701 | Msa0601810:CDS |
| TGATATGATACACTTTGCAA+TGG | 0.578298 | 4_2:+44831636 | Msa0601810:three_prime_UTR |
| ATGAATGAATGTTGAAAATG+GGG | 0.583164 | 4_2:-44827473 | None:intergenic |
| CGGCTGATGCGCCGGTGACG+AGG | 0.583826 | 4_2:-44827586 | None:intergenic |
| TGCGGTGGAGCTTGATGTGG+CGG | 0.586173 | 4_2:+44827739 | Msa0601810:CDS |
| TTGCCGGCAAGGTCCTGCCA+TGG | 0.590562 | 4_2:-44827557 | None:intergenic |
| CAAGCTCCACCGCAATGGCA+CGG | 0.592235 | 4_2:-44827730 | None:intergenic |
| CGACAAATATCATGTTGTTG+AGG | 0.592850 | 4_2:-44827267 | None:intergenic |
| AACTGCATACGCTTGTTCAA+AGG | 0.593937 | 4_2:+44829530 | Msa0601810:CDS |
| AAAGCAACTAGAACCATGGC+AGG | 0.595314 | 4_2:+44827544 | Msa0601810:CDS |
| AAATTGACAGGTGATGGCAT+TGG | 0.597713 | 4_2:+44831342 | Msa0601810:intron |
| GCATACGCTTGTTCAAAGGC+AGG | 0.604155 | 4_2:+44829534 | Msa0601810:CDS |
| TCCTCCTCAGTCAATTCCAA+GGG | 0.607693 | 4_2:-44829360 | None:intergenic |
| CATATCAAGTATTCATAGTG+AGG | 0.608610 | 4_2:-44831620 | None:intergenic |
| GTATGTCTTAAAAGACAAGA+AGG | 0.608944 | 4_2:-44827329 | None:intergenic |
| TGGCAAAGCAACTAGAACCA+TGG | 0.609409 | 4_2:+44827540 | Msa0601810:CDS |
| GGTGGCAACTACCATGAAGT+TGG | 0.612810 | 4_2:-44827371 | None:intergenic |
| ATGCGCAATTCAAAGAGGAA+AGG | 0.613448 | 4_2:+44829450 | Msa0601810:CDS |
| CATTGCGGTGGAGCTTGATG+TGG | 0.613468 | 4_2:+44827736 | Msa0601810:CDS |
| TCAATTGCTGGCCTAGAGAG+GGG | 0.613681 | 4_2:+44829492 | Msa0601810:CDS |
| AACTCATGCGCAATTCAAAG+AGG | 0.615598 | 4_2:+44829445 | Msa0601810:CDS |
| TCATTGTGTGATGAAATCAA+TGG | 0.617419 | 4_2:+44827692 | Msa0601810:CDS |
| CAATTGCTGGCCTAGAGAGG+GGG | 0.617473 | 4_2:+44829493 | Msa0601810:CDS |
| ACCCTTGGAATTGACTGAGG+AGG | 0.618106 | 4_2:+44829359 | Msa0601810:CDS |
| AAACATAACAGGTACATGGT+TGG | 0.619873 | 4_2:+44829404 | Msa0601810:CDS |
| TGATGAAATCAATGGAAAGG+AGG | 0.620320 | 4_2:+44827700 | Msa0601810:CDS |
| GTATGTACAGAAGGCGTGGG+AGG | 0.634153 | 4_2:+44827784 | Msa0601810:CDS |
| ACTTCAAAATCAATATAACA+TGG | 0.642775 | 4_2:+44827520 | Msa0601810:exon |
| GTGTGATGAAATCAATGGAA+AGG | 0.648715 | 4_2:+44827697 | Msa0601810:CDS |
| AGAGTGAATTCAATATCACC+AGG | 0.649340 | 4_2:+44831385 | Msa0601810:CDS |
| TTCACCCTTGGAATTGACTG+AGG | 0.656324 | 4_2:+44829356 | Msa0601810:CDS |
| AATGGGAATGGGAAATTTCG+GGG | 0.670755 | 4_2:-44827434 | None:intergenic |
| GATGCGTTGATCAATAATGC+CGG | 0.674779 | 4_2:+44827821 | Msa0601810:CDS |
| GGGAAGTCTCCGTGCCATTG+CGG | 0.678036 | 4_2:+44827721 | Msa0601810:CDS |
| ACAGTGCCATTAAGAGAATG+GGG | 0.679803 | 4_2:+44831475 | Msa0601810:CDS |
| AGGTGTCAATATGCTCACAA+AGG | 0.699533 | 4_2:+44829554 | Msa0601810:CDS |
| GGTGATGGCATTGGAATTGG+GGG | 0.706240 | 4_2:+44831351 | Msa0601810:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATAGTAGTATATATTTT+TGG | - | chr4_2:44828912-44828931 | None:intergenic | 10.0% |
| !! | AATATTCATCAATTAAAATA+GGG | + | chr4_2:44830267-44830286 | Msa0601810:intron | 10.0% |
| !! | CAACATATATAATTAAATTA+AGG | - | chr4_2:44830834-44830853 | None:intergenic | 10.0% |
| !! | GTCTAATACTTATAATATAA+GGG | - | chr4_2:44828635-44828654 | None:intergenic | 15.0% |
| !! | AGTCTAATACTTATAATATA+AGG | - | chr4_2:44828636-44828655 | None:intergenic | 15.0% |
| !!! | TATCTAATGTTGATAAATTA+AGG | + | chr4_2:44828766-44828785 | Msa0601810:intron | 15.0% |
| !!! | TTAATCTTATGCTTTTATAT+TGG | - | chr4_2:44829067-44829086 | None:intergenic | 15.0% |
| !!! | TTAATAATTTTAAGTGTATG+TGG | - | chr4_2:44829286-44829305 | None:intergenic | 15.0% |
| !! | AGAAAGATAAAATTGAAAAT+AGG | - | chr4_2:44829616-44829635 | None:intergenic | 15.0% |
| !! | ATAAATGAAGAAAGAAAATA+AGG | - | chr4_2:44830199-44830218 | None:intergenic | 15.0% |
| !! | GAATATTCATCAATTAAAAT+AGG | + | chr4_2:44830266-44830285 | Msa0601810:intron | 15.0% |
| !!! | TAATTTTCCCTTATTTTAAT+GGG | - | chr4_2:44830474-44830493 | None:intergenic | 15.0% |
| !! | TCTATTTAACAAAAACTTAA+GGG | - | chr4_2:44830567-44830586 | None:intergenic | 15.0% |
| !! | TATATTCAATTAACCTTTAA+TGG | + | chr4_2:44830646-44830665 | Msa0601810:intron | 15.0% |
| !! | CATATATAATTAAATTAAGG+AGG | - | chr4_2:44830831-44830850 | None:intergenic | 15.0% |
| !!! | ATTGCAAGTTTTAAAATTAA+AGG | + | chr4_2:44831194-44831213 | Msa0601810:intron | 15.0% |
| !!! | TTGCAAGTTTTAAAATTAAA+GGG | + | chr4_2:44831195-44831214 | Msa0601810:intron | 15.0% |
| !!! | TTTTTGTAATAAAAATTGAC+AGG | + | chr4_2:44831330-44831349 | Msa0601810:intron | 15.0% |
| !!! | GTTTTATGGTTTATGAAAAT+GGG | - | chr4_2:44827454-44827473 | None:intergenic | 20.0% |
| !! | AATGAATGAATGTTGAAAAT+GGG | - | chr4_2:44827477-44827496 | None:intergenic | 20.0% |
| !! | AAATGAATGAATGTTGAAAA+TGG | - | chr4_2:44827478-44827497 | None:intergenic | 20.0% |
| !! | ACTTCAAAATCAATATAACA+TGG | + | chr4_2:44827520-44827539 | Msa0601810:exon | 20.0% |
| !!! | AAGGTATTAAAGTGAAATAT+TGG | - | chr4_2:44828466-44828485 | None:intergenic | 20.0% |
| !!! | ATTTTAAACATTAGTCACTT+TGG | + | chr4_2:44828577-44828596 | Msa0601810:intron | 20.0% |
| !! | TAGCATGTATATTTACAAAA+AGG | + | chr4_2:44828675-44828694 | Msa0601810:intron | 20.0% |
| !! | GTGTATGAAAAAATATTGTA+AGG | + | chr4_2:44828987-44829006 | Msa0601810:intron | 20.0% |
| !! | TTGTGTAAAAAACTTTGTAA+GGG | + | chr4_2:44829727-44829746 | Msa0601810:intron | 20.0% |
| !! | TCAAATTAAACATTAATCCA+AGG | + | chr4_2:44829796-44829815 | Msa0601810:intron | 20.0% |
| !! | AATTTCTTGATAAGACAAAA+AGG | - | chr4_2:44830061-44830080 | None:intergenic | 20.0% |
| !!! | TTTTTGTCTTATCAAGAAAT+TGG | + | chr4_2:44830060-44830079 | Msa0601810:intron | 20.0% |
| !!! | TTTCACTTTTTCTCTTTTAT+TGG | - | chr4_2:44830241-44830260 | None:intergenic | 20.0% |
| !! | ACTAGTTAAGAAGTTTAAAA+AGG | - | chr4_2:44830426-44830445 | None:intergenic | 20.0% |
| !!! | GTAATTTTCCCTTATTTTAA+TGG | - | chr4_2:44830475-44830494 | None:intergenic | 20.0% |
| !! | GTCTATTTAACAAAAACTTA+AGG | - | chr4_2:44830568-44830587 | None:intergenic | 20.0% |
| !!! | AATTGATTTAAGTTCAACAA+TGG | - | chr4_2:44830682-44830701 | None:intergenic | 20.0% |
| !!! | TTTTTGAAAGATCAATGAAA+TGG | - | chr4_2:44830945-44830964 | None:intergenic | 20.0% |
| !! | AAACATCTATGAAAAGAAAA+CGG | + | chr4_2:44831107-44831126 | Msa0601810:intron | 20.0% |
| !! | TATATTTGAGGAAAACTTAA+GGG | + | chr4_2:44831166-44831185 | Msa0601810:intron | 20.0% |
| !!! | TGCAAGTTTTAAAATTAAAG+GGG | + | chr4_2:44831196-44831215 | Msa0601810:intron | 20.0% |
| !! | AAAATTTGATGAAGAAAGAT+TGG | + | chr4_2:44831431-44831450 | Msa0601810:CDS | 20.0% |
| !!! | TGAGAATTTTTGAAAAGAAA+TGG | + | chr4_2:44831813-44831832 | Msa0601810:three_prime_UTR | 20.0% |
| !!! | GGTTTTATGGTTTATGAAAA+TGG | - | chr4_2:44827455-44827474 | None:intergenic | 25.0% |
| ! | ATGAATGAATGTTGAAAATG+GGG | - | chr4_2:44827476-44827495 | None:intergenic | 25.0% |
| ! | GCTGATACATATAATTATAC+TGG | + | chr4_2:44827932-44827951 | Msa0601810:intron | 25.0% |
| !!! | TTGATTCAAAAAGTTGATGA+TGG | + | chr4_2:44828170-44828189 | Msa0601810:intron | 25.0% |
| ! | ATGATTTATTGTTTGTGTGA+AGG | + | chr4_2:44828222-44828241 | Msa0601810:intron | 25.0% |
| ! | TATACATGCTAGTAACTTAA+GGG | - | chr4_2:44828666-44828685 | None:intergenic | 25.0% |
| ! | ATATACATGCTAGTAACTTA+AGG | - | chr4_2:44828667-44828686 | None:intergenic | 25.0% |
| ! | TGATCCTAACTTGAAAATAT+TGG | - | chr4_2:44828743-44828762 | None:intergenic | 25.0% |
| !! | GATAAATTAAGGTACCAAAA+TGG | + | chr4_2:44828777-44828796 | Msa0601810:intron | 25.0% |
| !! | GTGTTTAAAACAAACATAAC+AGG | + | chr4_2:44829393-44829412 | Msa0601810:CDS | 25.0% |
| !!! | AAATTTGTTTTCATGTGACT+TGG | + | chr4_2:44829641-44829660 | Msa0601810:intron | 25.0% |
| ! | CTTGTGTAAAAAACTTTGTA+AGG | + | chr4_2:44829726-44829745 | Msa0601810:intron | 25.0% |
| !! | AAAAACTTTGTAAGGGTTTT+CGG | + | chr4_2:44829734-44829753 | Msa0601810:intron | 25.0% |
| ! | TACACTTGTCATATCATAAT+TGG | - | chr4_2:44829866-44829885 | None:intergenic | 25.0% |
| ! | TAGAAAAAAGTCTCATCATT+TGG | - | chr4_2:44829944-44829963 | None:intergenic | 25.0% |
| !!! | TTTTTCAGATCGTATATATG+CGG | + | chr4_2:44829970-44829989 | Msa0601810:intron | 25.0% |
| ! | ACTAGTAGTATTAGACTAAA+GGG | - | chr4_2:44830020-44830039 | None:intergenic | 25.0% |
| ! | TACTAGTAGTATTAGACTAA+AGG | - | chr4_2:44830021-44830040 | None:intergenic | 25.0% |
| !!! | CTACTAGTATTTGTTTTCTT+TGG | + | chr4_2:44830032-44830051 | Msa0601810:intron | 25.0% |
| ! | TAGCATTTCCCATTAAAATA+AGG | + | chr4_2:44830463-44830482 | Msa0601810:intron | 25.0% |
| ! | AGCATTTCCCATTAAAATAA+GGG | + | chr4_2:44830464-44830483 | Msa0601810:intron | 25.0% |
| !!! | TGTAAGTTTTAAAACTAGAG+GGG | - | chr4_2:44830537-44830556 | None:intergenic | 25.0% |
| !!! | GTGTAAGTTTTAAAACTAGA+GGG | - | chr4_2:44830538-44830557 | None:intergenic | 25.0% |
| !!! | AGTGTAAGTTTTAAAACTAG+AGG | - | chr4_2:44830539-44830558 | None:intergenic | 25.0% |
| ! | ATTTAACAAAAACTTAAGGG+AGG | - | chr4_2:44830564-44830583 | None:intergenic | 25.0% |
| ! | ATTCAATTAACCTTTAATGG+AGG | + | chr4_2:44830649-44830668 | Msa0601810:intron | 25.0% |
| ! | AATTAAAAAGCCATAACCTA+TGG | - | chr4_2:44830771-44830790 | None:intergenic | 25.0% |
| ! | ATAATTAAATTAAGGAGGAG+AGG | - | chr4_2:44830826-44830845 | None:intergenic | 25.0% |
| !! | TGCTACTAAATTGATTTCTA+AGG | - | chr4_2:44831049-44831068 | None:intergenic | 25.0% |
| ! | AAATCAATTTAGTAGCACAA+TGG | + | chr4_2:44831052-44831071 | Msa0601810:intron | 25.0% |
| ! | GTATATTTGAGGAAAACTTA+AGG | + | chr4_2:44831165-44831184 | Msa0601810:intron | 25.0% |
| !!! | GCAAGTTTTAAAATTAAAGG+GGG | + | chr4_2:44831197-44831216 | Msa0601810:intron | 25.0% |
| !! | TGTCATTTACATAAAGTTGA+AGG | + | chr4_2:44831226-44831245 | Msa0601810:intron | 25.0% |
| ! | GTCATTTACATAAAGTTGAA+GGG | + | chr4_2:44831227-44831246 | Msa0601810:intron | 25.0% |
| ! | TAATAAAAATTGACAGGTGA+TGG | + | chr4_2:44831336-44831355 | Msa0601810:intron | 25.0% |
| ! | AATATATTTATTGCTGATGC+TGG | + | chr4_2:44831568-44831587 | Msa0601810:CDS | 25.0% |
| ! | ATTCATAGTGAGGAATAAAT+AGG | - | chr4_2:44831613-44831632 | None:intergenic | 25.0% |
| ! | AAAATATGATGAGTGAAACT+TGG | + | chr4_2:44831662-44831681 | Msa0601810:three_prime_UTR | 25.0% |
| !!! | GTAGGATCAATTTTTGAGTA+AGG | + | chr4_2:44827227-44827246 | Msa0601810:five_prime_UTR | 30.0% |
| GTATGTCTTAAAAGACAAGA+AGG | - | chr4_2:44827332-44827351 | None:intergenic | 30.0% | |
| TGAATTTACTTCCAACTTCA+TGG | + | chr4_2:44827360-44827379 | Msa0601810:five_prime_UTR | 30.0% | |
| AAAATGGGAATGGGAAATTT+CGG | - | chr4_2:44827439-44827458 | None:intergenic | 30.0% | |
| TGGTTTATGAAAATGGGAAT+GGG | - | chr4_2:44827448-44827467 | None:intergenic | 30.0% | |
| ATGGTTTATGAAAATGGGAA+TGG | - | chr4_2:44827449-44827468 | None:intergenic | 30.0% | |
| ! | ATGTTGAAAATGGGGTTTTA+TGG | - | chr4_2:44827468-44827487 | None:intergenic | 30.0% |
| TCATTGTGTGATGAAATCAA+TGG | + | chr4_2:44827692-44827711 | Msa0601810:CDS | 30.0% | |
| ! | TATAGAGAAGTATGTACAGA+AGG | + | chr4_2:44827775-44827794 | Msa0601810:CDS | 30.0% |
| ATTCAAATTACCTCTAACAC+CGG | - | chr4_2:44827843-44827862 | None:intergenic | 30.0% | |
| ! | ATCGTTCTTTATTTGAGATG+TGG | + | chr4_2:44828246-44828265 | Msa0601810:intron | 30.0% |
| GTCTAACATTTACAACTTGA+TGG | + | chr4_2:44828706-44828725 | Msa0601810:intron | 30.0% | |
| TTACAACTTGATGGAACTAA+AGG | + | chr4_2:44828715-44828734 | Msa0601810:intron | 30.0% | |
| TACAACTTGATGGAACTAAA+GGG | + | chr4_2:44828716-44828735 | Msa0601810:intron | 30.0% | |
| !! | AAGTGCTTTTGATTCCATTT+TGG | - | chr4_2:44828794-44828813 | None:intergenic | 30.0% |
| !! | AATGGAATCAAAAGCACTTA+TGG | + | chr4_2:44828795-44828814 | Msa0601810:intron | 30.0% |
| !! | ATGGAATCAAAAGCACTTAT+GGG | + | chr4_2:44828796-44828815 | Msa0601810:intron | 30.0% |
| AGCATAAAATATGTCGAGAA+AGG | - | chr4_2:44829240-44829259 | None:intergenic | 30.0% | |
| ! | TCTCGACATATTTTATGCTT+TGG | + | chr4_2:44829241-44829260 | Msa0601810:intron | 30.0% |
| !! | TTTTAAGTGTATGTGGTCAA+AGG | - | chr4_2:44829279-44829298 | None:intergenic | 30.0% |
| GATTTATTGTTGTGTTGTGT+AGG | + | chr4_2:44829324-44829343 | Msa0601810:intron | 30.0% | |
| AAACAAACATAACAGGTACA+TGG | + | chr4_2:44829400-44829419 | Msa0601810:CDS | 30.0% | |
| ATCAATATCTCTTCAATTGC+TGG | + | chr4_2:44829480-44829499 | Msa0601810:CDS | 30.0% | |
| !! | AATGTTACGGGTTAAAGTTT+TGG | + | chr4_2:44829696-44829715 | Msa0601810:intron | 30.0% |
| GGAATAGAGAATGTGATAAA+TGG | + | chr4_2:44829755-44829774 | Msa0601810:intron | 30.0% | |
| ! | ATCCAAGGTTCCTTAATTTT+AGG | + | chr4_2:44829811-44829830 | Msa0601810:intron | 30.0% |
| ATCCTAAAATTAAGGAACCT+TGG | - | chr4_2:44829816-44829835 | None:intergenic | 30.0% | |
| GGCTAATGATCCTAAAATTA+AGG | - | chr4_2:44829824-44829843 | None:intergenic | 30.0% | |
| ATAATCTCATTCATCACACA+TGG | - | chr4_2:44830121-44830140 | None:intergenic | 30.0% | |
| ! | TTTATCTCGCTCTATTGTTT+TGG | + | chr4_2:44830214-44830233 | Msa0601810:intron | 30.0% |
| !!! | GTAAGTTTTAAAACTAGAGG+GGG | - | chr4_2:44830536-44830555 | None:intergenic | 30.0% |
| !! | ATTAACAGTGTTGATAGCAA+AGG | - | chr4_2:44830599-44830618 | None:intergenic | 30.0% |
| ! | TGATTTAAGTTCAACAATGG+AGG | - | chr4_2:44830679-44830698 | None:intergenic | 30.0% |
| ATTCAAGAAACCATAGGTTA+TGG | + | chr4_2:44830758-44830777 | Msa0601810:intron | 30.0% | |
| AGGAAAAGTGAGAATGAAAT+GGG | - | chr4_2:44830806-44830825 | None:intergenic | 30.0% | |
| TATATGTTGCACTCAGATTA+TGG | + | chr4_2:44830845-44830864 | Msa0601810:intron | 30.0% | |
| GATCAATGAAATGGAATTGA+CGG | - | chr4_2:44830936-44830955 | None:intergenic | 30.0% | |
| AAGTAACAGAGTTAATAGCA+AGG | + | chr4_2:44831133-44831152 | Msa0601810:intron | 30.0% | |
| AGTAACAGAGTTAATAGCAA+GGG | + | chr4_2:44831134-44831153 | Msa0601810:intron | 30.0% | |
| ATTTACATAAAGTTGAAGGG+AGG | + | chr4_2:44831230-44831249 | Msa0601810:intron | 30.0% | |
| ATTTCAGATTTGAAAAGTCC+TGG | - | chr4_2:44831406-44831425 | None:intergenic | 30.0% | |
| CATATCAAGTATTCATAGTG+AGG | - | chr4_2:44831623-44831642 | None:intergenic | 30.0% | |
| TGATATGATACACTTTGCAA+TGG | + | chr4_2:44831636-44831655 | Msa0601810:three_prime_UTR | 30.0% | |
| TTCTCATGGTTACTAATCTA+CGG | + | chr4_2:44831720-44831739 | Msa0601810:three_prime_UTR | 30.0% | |
| CGACAAATATCATGTTGTTG+AGG | - | chr4_2:44827270-44827289 | None:intergenic | 35.0% | |
| !! | AAGGATGATTGATTTGGTGT+TGG | - | chr4_2:44827395-44827414 | None:intergenic | 35.0% |
| AAATGGGAATGGGAAATTTC+GGG | - | chr4_2:44827438-44827457 | None:intergenic | 35.0% | |
| GTGTGATGAAATCAATGGAA+AGG | + | chr4_2:44827697-44827716 | Msa0601810:CDS | 35.0% | |
| TGATGAAATCAATGGAAAGG+AGG | + | chr4_2:44827700-44827719 | Msa0601810:CDS | 35.0% | |
| GATGAAATCAATGGAAAGGA+GGG | + | chr4_2:44827701-44827720 | Msa0601810:CDS | 35.0% | |
| !! | ATCTAAAGAGTGTCTGTACT+TGG | - | chr4_2:44827883-44827902 | None:intergenic | 35.0% |
| TACAGATATTAGACACGACA+TGG | - | chr4_2:44828004-44828023 | None:intergenic | 35.0% | |
| TGTGCATGCTTTGTAGATTT+CGG | + | chr4_2:44828057-44828076 | Msa0601810:intron | 35.0% | |
| ! | GAGTTTTGCTACATATGTAG+CGG | - | chr4_2:44828408-44828427 | None:intergenic | 35.0% |
| ATTGTGATTCCTTACGCTAT+CGG | + | chr4_2:44828502-44828521 | Msa0601810:intron | 35.0% | |
| !!! | GGGTCCAATATTTTCAAGTT+AGG | + | chr4_2:44828736-44828755 | Msa0601810:intron | 35.0% |
| ACTCAGAGATCAAAGTGAAA+CGG | + | chr4_2:44828841-44828860 | Msa0601810:intron | 35.0% | |
| ! | AGCACTTTTCTTCGAATGAT+TGG | + | chr4_2:44828934-44828953 | Msa0601810:intron | 35.0% |
| TTGGATGATATAGCTTATGG+TGG | - | chr4_2:44829172-44829191 | None:intergenic | 35.0% | |
| CACTTGGATGATATAGCTTA+TGG | - | chr4_2:44829175-44829194 | None:intergenic | 35.0% | |
| ! | ATTAGTCACTTTCAGTCACT+TGG | - | chr4_2:44829191-44829210 | None:intergenic | 35.0% |
| AAACATAACAGGTACATGGT+TGG | + | chr4_2:44829404-44829423 | Msa0601810:CDS | 35.0% | |
| GTCACATGACTGAAATGTTA+CGG | + | chr4_2:44829683-44829702 | Msa0601810:intron | 35.0% | |
| TCACATGACTGAAATGTTAC+GGG | + | chr4_2:44829684-44829703 | Msa0601810:intron | 35.0% | |
| TGCGGAAACTTTATTGTATC+AGG | + | chr4_2:44829988-44830007 | Msa0601810:intron | 35.0% | |
| TGGTAAAATCAAGAAGCTGA+CGG | + | chr4_2:44830080-44830099 | Msa0601810:intron | 35.0% | |
| ACACATGGCAACAAGAATTA+AGG | - | chr4_2:44830106-44830125 | None:intergenic | 35.0% | |
| GTGAGTATGAGAGATAAAGA+TGG | - | chr4_2:44830169-44830188 | None:intergenic | 35.0% | |
| ! | TCTTGAATGCATCCTTTTCA+AGG | + | chr4_2:44830392-44830411 | Msa0601810:intron | 35.0% |
| ! | AAGGAAGTTTTGCCTTGAAA+AGG | - | chr4_2:44830407-44830426 | None:intergenic | 35.0% |
| !!! | TGTCATTTTCATAGACCTCA+GGG | - | chr4_2:44830507-44830526 | None:intergenic | 35.0% |
| CCTATGGTTTCTTGAATGTT+TGG | - | chr4_2:44830755-44830774 | None:intergenic | 35.0% | |
| CCAAACATTCAAGAAACCAT+AGG | + | chr4_2:44830752-44830771 | Msa0601810:intron | 35.0% | |
| GGAAAAGTGAGAATGAAATG+GGG | - | chr4_2:44830805-44830824 | None:intergenic | 35.0% | |
| GAGGAAAAGTGAGAATGAAA+TGG | - | chr4_2:44830807-44830826 | None:intergenic | 35.0% | |
| GGAATTGACGGTTTAAAGAA+AGG | - | chr4_2:44830924-44830943 | None:intergenic | 35.0% | |
| GAGAGTAAGCATCAATGAAA+TGG | - | chr4_2:44830977-44830996 | None:intergenic | 35.0% | |
| TCAATTTAGTAGCACAATGG+TGG | + | chr4_2:44831055-44831074 | Msa0601810:intron | 35.0% | |
| GGGAGCTATTTGTATATTTG+AGG | + | chr4_2:44831154-44831173 | Msa0601810:intron | 35.0% | |
| ATTTGAGGAAAACTTAAGGG+AGG | + | chr4_2:44831169-44831188 | Msa0601810:intron | 35.0% | |
| AGAGTGAATTCAATATCACC+AGG | + | chr4_2:44831385-44831404 | Msa0601810:CDS | 35.0% | |
| ! | AACAGTGCCATTAAGAGAAT+GGG | + | chr4_2:44831474-44831493 | Msa0601810:CDS | 35.0% |
| GATTCTTCTGAATATGTGAC+AGG | + | chr4_2:44831544-44831563 | Msa0601810:CDS | 35.0% | |
| ATAAATAGGAAAGCCTGGTA+AGG | - | chr4_2:44831599-44831618 | None:intergenic | 35.0% | |
| CATGAGTTAAGATGTTCTCA+TGG | + | chr4_2:44831706-44831725 | Msa0601810:three_prime_UTR | 35.0% | |
| TCTCATGGTTACTAATCTAC+GGG | + | chr4_2:44831721-44831740 | Msa0601810:three_prime_UTR | 35.0% | |
| !! | GATGATTGATTTGGTGTTGG+TGG | - | chr4_2:44827392-44827411 | None:intergenic | 40.0% |
| GTGGTGAAGGATGATTGATT+TGG | - | chr4_2:44827401-44827420 | None:intergenic | 40.0% | |
| !! | AATGGATTGGAAAGTGGTGA+AGG | - | chr4_2:44827414-44827433 | None:intergenic | 40.0% |
| AATGGGAATGGGAAATTTCG+GGG | - | chr4_2:44827437-44827456 | None:intergenic | 40.0% | |
| ! | GATGCGTTGATCAATAATGC+CGG | + | chr4_2:44827821-44827840 | Msa0601810:CDS | 40.0% |
| ! | ATCAATAATGCCGGTGTTAG+AGG | + | chr4_2:44827830-44827849 | Msa0601810:CDS | 40.0% |
| ! | ATTTGAGATGTGGTACCAAG+CGG | + | chr4_2:44828256-44828275 | Msa0601810:intron | 40.0% |
| ! | CTTTTCAATATTGCACCGCT+TGG | - | chr4_2:44828274-44828293 | None:intergenic | 40.0% |
| CAAGCGGTGCAATATTGAAA+AGG | + | chr4_2:44828272-44828291 | Msa0601810:intron | 40.0% | |
| !! | CTATCGGTGTTGAACACTTT+GGG | + | chr4_2:44828518-44828537 | Msa0601810:intron | 40.0% |
| AACTCATGCGCAATTCAAAG+AGG | + | chr4_2:44829445-44829464 | Msa0601810:CDS | 40.0% | |
| ATGCGCAATTCAAAGAGGAA+AGG | + | chr4_2:44829450-44829469 | Msa0601810:CDS | 40.0% | |
| AACTGCATACGCTTGTTCAA+AGG | + | chr4_2:44829530-44829549 | Msa0601810:CDS | 40.0% | |
| AGGTGTCAATATGCTCACAA+AGG | + | chr4_2:44829554-44829573 | Msa0601810:CDS | 40.0% | |
| ATTCTTAACCATTGCCCTGA+GGG | - | chr4_2:44830308-44830327 | None:intergenic | 40.0% | |
| AATTCTTAACCATTGCCCTG+AGG | - | chr4_2:44830309-44830328 | None:intergenic | 40.0% | |
| !! | GTCATTTTCATAGACCTCAG+GGG | - | chr4_2:44830506-44830525 | None:intergenic | 40.0% |
| !!! | GTGTCATTTTCATAGACCTC+AGG | - | chr4_2:44830508-44830527 | None:intergenic | 40.0% |
| !! | AACAGTGTTGATAGCAAAGG+AGG | - | chr4_2:44830596-44830615 | None:intergenic | 40.0% |
| ! | TGGAGGTTTTCCTCCATTAA+AGG | - | chr4_2:44830662-44830681 | None:intergenic | 40.0% |
| ! | GCAAAGACATGTACTGACAT+TGG | + | chr4_2:44831301-44831320 | Msa0601810:intron | 40.0% |
| ! | AAATTGACAGGTGATGGCAT+TGG | + | chr4_2:44831342-44831361 | Msa0601810:intron | 40.0% |
| TCTTAATGGCACTGTTCTCA+TGG | - | chr4_2:44831470-44831489 | None:intergenic | 40.0% | |
| ! | GAACAGTGCCATTAAGAGAA+TGG | + | chr4_2:44831473-44831492 | Msa0601810:CDS | 40.0% |
| ! | ACAGTGCCATTAAGAGAATG+GGG | + | chr4_2:44831475-44831494 | Msa0601810:CDS | 40.0% |
| CGAGCAATTGATGTTAATGC+TGG | - | chr4_2:44831511-44831530 | None:intergenic | 40.0% | |
| GAGGAATAAATAGGAAAGCC+TGG | - | chr4_2:44831604-44831623 | None:intergenic | 40.0% | |
| GGAAATTTCGGGGAATGGAT+TGG | - | chr4_2:44827427-44827446 | None:intergenic | 45.0% | |
| GAATGGGAAATTTCGGGGAA+TGG | - | chr4_2:44827432-44827451 | None:intergenic | 45.0% | |
| TGGCAAAGCAACTAGAACCA+TGG | + | chr4_2:44827540-44827559 | Msa0601810:CDS | 45.0% | |
| AAAGCAACTAGAACCATGGC+AGG | + | chr4_2:44827544-44827563 | Msa0601810:CDS | 45.0% | |
| ! | TGCAGGATGTTTTGTGATCG+CGG | + | chr4_2:44827643-44827662 | Msa0601810:CDS | 45.0% |
| ! | AGAAGTATGTACAGAAGGCG+TGG | + | chr4_2:44827780-44827799 | Msa0601810:CDS | 45.0% |
| ! | GAAGTATGTACAGAAGGCGT+GGG | + | chr4_2:44827781-44827800 | Msa0601810:CDS | 45.0% |
| TGTTCAACACCGATAGCGTA+AGG | - | chr4_2:44828514-44828533 | None:intergenic | 45.0% | |
| !! | GCTATCGGTGTTGAACACTT+TGG | + | chr4_2:44828517-44828536 | Msa0601810:intron | 45.0% |
| AGGAAATGTGAGTTCACCCT+TGG | + | chr4_2:44829344-44829363 | Msa0601810:intron | 45.0% | |
| TTCACCCTTGGAATTGACTG+AGG | + | chr4_2:44829356-44829375 | Msa0601810:CDS | 45.0% | |
| TCCTCCTCAGTCAATTCCAA+GGG | - | chr4_2:44829363-44829382 | None:intergenic | 45.0% | |
| TTCCTCCTCAGTCAATTCCA+AGG | - | chr4_2:44829364-44829383 | None:intergenic | 45.0% | |
| TGGAATTGACTGAGGAGGAA+TGG | + | chr4_2:44829364-44829383 | Msa0601810:CDS | 45.0% | |
| ! | TTCAATTGCTGGCCTAGAGA+GGG | + | chr4_2:44829491-44829510 | Msa0601810:CDS | 45.0% |
| ! | GGTTGATGCAAATTGACACG+TGG | - | chr4_2:44829845-44829864 | None:intergenic | 45.0% |
| ! | TTTTGCTAACCAATGCCCTC+AGG | + | chr4_2:44830290-44830309 | Msa0601810:intron | 45.0% |
| TTTGCTAACCAATGCCCTCA+GGG | + | chr4_2:44830291-44830310 | Msa0601810:intron | 45.0% | |
| ACTTCTTAACTAGTGCCCTC+CGG | + | chr4_2:44830432-44830451 | Msa0601810:intron | 45.0% | |
| AATGCTAACCATTGTCCGGA+GGG | - | chr4_2:44830450-44830469 | None:intergenic | 45.0% | |
| AAATGCTAACCATTGTCCGG+AGG | - | chr4_2:44830451-44830470 | None:intergenic | 45.0% | |
| GGGAAATGCTAACCATTGTC+CGG | - | chr4_2:44830454-44830473 | None:intergenic | 45.0% | |
| AATTACATTCACCTCCCCTG+AGG | + | chr4_2:44830489-44830508 | Msa0601810:intron | 45.0% | |
| ! | ATTTTCATAGACCTCAGGGG+AGG | - | chr4_2:44830503-44830522 | None:intergenic | 45.0% |
| ! | ACAGGTGATGGCATTGGAAT+TGG | + | chr4_2:44831348-44831367 | Msa0601810:intron | 45.0% |
| ! | CAGGTGATGGCATTGGAATT+GGG | + | chr4_2:44831349-44831368 | Msa0601810:intron | 45.0% |
| ! | AGGTGATGGCATTGGAATTG+GGG | + | chr4_2:44831350-44831369 | Msa0601810:intron | 45.0% |
| ! | GAAGTGCCCCATTCTCTTAA+TGG | - | chr4_2:44831484-44831503 | None:intergenic | 45.0% |
| !!! | AATAAAACTAATATTTTTTA+AGG | - | chr4_2:44828485-44828504 | None:intergenic | 5.0% |
| !!! | AATATTTTTTAAGTTTTATT+TGG | - | chr4_2:44828881-44828900 | None:intergenic | 5.0% |
| !!! | ATTATAATTTTTAAAATACA+AGG | + | chr4_2:44829128-44829147 | Msa0601810:intron | 5.0% |
| GGTGGCAACTACCATGAAGT+TGG | - | chr4_2:44827374-44827393 | None:intergenic | 50.0% | |
| !! | TCGGGGAATGGATTGGAAAG+TGG | - | chr4_2:44827420-44827439 | None:intergenic | 50.0% |
| !! | GCAGAAATCACTGCCGATTC+CGG | - | chr4_2:44827609-44827628 | None:intergenic | 50.0% |
| ! | AGGATGTTTTGTGATCGCGG+CGG | + | chr4_2:44827646-44827665 | Msa0601810:CDS | 50.0% |
| ! | TGTATCAGCGAGTGTCGTGT+TGG | - | chr4_2:44827921-44827940 | None:intergenic | 50.0% |
| ACCCTTGGAATTGACTGAGG+AGG | + | chr4_2:44829359-44829378 | Msa0601810:CDS | 50.0% | |
| ! | CTTCAATTGCTGGCCTAGAG+AGG | + | chr4_2:44829490-44829509 | Msa0601810:CDS | 50.0% |
| ! | TCAATTGCTGGCCTAGAGAG+GGG | + | chr4_2:44829492-44829511 | Msa0601810:CDS | 50.0% |
| ACAAGCGTATGCAGTTCCAC+CGG | - | chr4_2:44829526-44829545 | None:intergenic | 50.0% | |
| GCATACGCTTGTTCAAAGGC+AGG | + | chr4_2:44829534-44829553 | Msa0601810:CDS | 50.0% | |
| ! | GGTGATGGCATTGGAATTGG+GGG | + | chr4_2:44831351-44831370 | Msa0601810:intron | 50.0% |
| GGTGACGAGGACAACTTTGC+CGG | - | chr4_2:44827576-44827595 | None:intergenic | 55.0% | |
| GGCAAAGTTGTCCTCGTCAC+CGG | + | chr4_2:44827575-44827594 | Msa0601810:CDS | 55.0% | |
| ATCCTGCACGAGCGAGATCA+AGG | - | chr4_2:44827631-44827650 | None:intergenic | 55.0% | |
| CACATCAAGCTCCACCGCAA+TGG | - | chr4_2:44827738-44827757 | None:intergenic | 55.0% | |
| CATTGCGGTGGAGCTTGATG+TGG | + | chr4_2:44827736-44827755 | Msa0601810:CDS | 55.0% | |
| ! | GTATGTACAGAAGGCGTGGG+AGG | + | chr4_2:44827784-44827803 | Msa0601810:CDS | 55.0% |
| ! | CAATTGCTGGCCTAGAGAGG+GGG | + | chr4_2:44829493-44829512 | Msa0601810:CDS | 55.0% |
| CAAGCGTATGCAGTTCCACC+GGG | - | chr4_2:44829525-44829544 | None:intergenic | 55.0% | |
| AACCAATGCCCTCAGGGCAA+TGG | + | chr4_2:44830297-44830316 | Msa0601810:intron | 55.0% | |
| ! | AACCATTGCCCTGAGGGCAT+TGG | - | chr4_2:44830302-44830321 | None:intergenic | 55.0% |
| AACTAGTGCCCTCCGGACAA+TGG | + | chr4_2:44830439-44830458 | Msa0601810:intron | 55.0% | |
| !! | GATGCTGGTGCTACCTTACC+AGG | + | chr4_2:44831583-44831602 | Msa0601810:CDS | 55.0% |
| GAACCATGGCAGGACCTTGC+CGG | + | chr4_2:44827554-44827573 | Msa0601810:CDS | 60.0% | |
| CGAGGACAACTTTGCCGGCA+AGG | - | chr4_2:44827571-44827590 | None:intergenic | 60.0% | |
| TGCCTTGATCTCGCTCGTGC+AGG | + | chr4_2:44827626-44827645 | Msa0601810:CDS | 60.0% | |
| ! | GGGAAGTCTCCGTGCCATTG+CGG | + | chr4_2:44827721-44827740 | Msa0601810:CDS | 60.0% |
| ! | AAGTCTCCGTGCCATTGCGG+TGG | + | chr4_2:44827724-44827743 | Msa0601810:CDS | 60.0% |
| CAAGCTCCACCGCAATGGCA+CGG | - | chr4_2:44827733-44827752 | None:intergenic | 60.0% | |
| TGCGGTGGAGCTTGATGTGG+CGG | + | chr4_2:44827739-44827758 | Msa0601810:CDS | 60.0% | |
| GAGCTTGATGTGGCGGCTGA+TGG | + | chr4_2:44827746-44827765 | Msa0601810:CDS | 60.0% | |
| CTTGATGTGGCGGCTGATGG+TGG | + | chr4_2:44827749-44827768 | Msa0601810:CDS | 60.0% | |
| !! | CAGAAGGCGTGGGAGGCTTT+TGG | + | chr4_2:44827791-44827810 | Msa0601810:CDS | 60.0% |
| CTAGAGAGGGGGCAATTGCC+CGG | + | chr4_2:44829504-44829523 | Msa0601810:CDS | 60.0% | |
| TTGCCGGCAAGGTCCTGCCA+TGG | - | chr4_2:44827560-44827579 | None:intergenic | 65.0% | |
| ACCGGCGCATCAGCCGGAAT+CGG | + | chr4_2:44827593-44827612 | Msa0601810:CDS | 65.0% | |
| CGGGCAATTGCCCCCTCTCT+AGG | - | chr4_2:44829506-44829525 | None:intergenic | 65.0% | |
| CTCGTCACCGGCGCATCAGC+CGG | + | chr4_2:44827587-44827606 | Msa0601810:CDS | 70.0% | |
| ! | GCCGATTCCGGCTGATGCGC+CGG | - | chr4_2:44827597-44827616 | None:intergenic | 70.0% |
| GAGAGGGGGCAATTGCCCGG+TGG | + | chr4_2:44829507-44829526 | Msa0601810:CDS | 70.0% | |
| ! | CGGCTGATGCGCCGGTGACG+AGG | - | chr4_2:44827589-44827608 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 44827227 | 44831894 | 44827227 | ID=Msa0601810;Name=Msa0601810 |
| chr4_2 | mRNA | 44827227 | 44831894 | 44827227 | ID=Msa0601810-mRNA-1;Parent=Msa0601810;Name=Msa0601810-mRNA-1;_AED=0.04;_eAED=0.04;_QI=312|1|1|1|1|1|3|264|273 |
| chr4_2 | exon | 44827227 | 44827851 | 44827227 | ID=Msa0601810-mRNA-1:exon:9953;Parent=Msa0601810-mRNA-1 |
| chr4_2 | exon | 44829346 | 44829575 | 44829346 | ID=Msa0601810-mRNA-1:exon:9954;Parent=Msa0601810-mRNA-1 |
| chr4_2 | exon | 44831352 | 44831894 | 44831352 | ID=Msa0601810-mRNA-1:exon:9955;Parent=Msa0601810-mRNA-1 |
| chr4_2 | five_prime_UTR | 44827227 | 44827538 | 44827227 | ID=Msa0601810-mRNA-1:five_prime_utr;Parent=Msa0601810-mRNA-1 |
| chr4_2 | CDS | 44827539 | 44827851 | 44827539 | ID=Msa0601810-mRNA-1:cds;Parent=Msa0601810-mRNA-1 |
| chr4_2 | CDS | 44829346 | 44829575 | 44829346 | ID=Msa0601810-mRNA-1:cds;Parent=Msa0601810-mRNA-1 |
| chr4_2 | CDS | 44831352 | 44831630 | 44831352 | ID=Msa0601810-mRNA-1:cds;Parent=Msa0601810-mRNA-1 |
| chr4_2 | three_prime_UTR | 44831631 | 44831894 | 44831631 | ID=Msa0601810-mRNA-1:three_prime_utr;Parent=Msa0601810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
