AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1082290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1082290 MtrunA17_Chr1g0154421 93.289 149 10 0 19 167 1 149 1.53e-101 297
Msa1082290 MtrunA17_Chr1g0172731 44.211 380 201 4 25 395 26 403 1.14e-100 305
Msa1082290 MtrunA17_Chr1g0190171 43.947 380 202 4 25 395 26 403 2.76e-100 303
Msa1082290 MtrunA17_Chr1g0182341 38.043 368 186 6 8 358 2 344 3.67e-71 228
Msa1082290 MtrunA17_Chr8g0334561 42.276 246 140 2 4 248 5 249 5.68e-61 198
Msa1082290 MtrunA17_Chr6g0477141 36.050 319 186 5 39 347 114 424 9.17e-61 204
Msa1082290 MtrunA17_Chr2g0321401 46.018 226 120 2 25 249 25 249 1.09e-60 197
Msa1082290 MtrunA17_Chr6g0478531 34.036 332 204 5 49 370 22 348 2.56e-58 195
Msa1082290 MtrunA17_Chr1g0207391 34.783 299 184 5 45 335 68 363 1.20e-57 194
Msa1082290 MtrunA17_Chr7g0226311 36.826 334 189 9 67 391 12 332 8.49e-57 189
Msa1082290 MtrunA17_Chr2g0285471 48.352 182 93 1 68 249 1 181 8.77e-54 177
Msa1082290 MtrunA17_Chr8g0391981 37.367 281 161 5 61 334 74 346 3.86e-52 179
Msa1082290 MtrunA17_Chr7g0267201 45.000 160 81 1 71 223 1 160 2.46e-43 149
Msa1082290 MtrunA17_Chr1g0156351 65.116 86 29 1 312 396 1 86 1.66e-31 115
Msa1082290 MtrunA17_Chr4g0018411 42.529 87 47 3 250 334 16 101 1.77e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1082290 AT1G43722.1 34.483 290 174 5 31 305 31 319 4.77e-53 179
Msa1082290 AT5G41980.1 29.810 369 223 8 39 391 15 363 1.84e-49 171
Msa1082290 AT5G28730.1 30.986 213 113 4 68 271 27 214 5.53e-30 117
Msa1082290 AT3G30525.1 35.849 159 88 3 178 323 1 158 1.21e-26 105
Msa1082290 AT5G35695.1 37.209 129 76 2 215 342 24 148 1.10e-21 92.8
Msa1082290 AT5G28950.1 41.758 91 53 0 157 247 8 98 1.22e-21 90.9
Msa1082290 AT4G10890.3 37.363 91 48 2 227 309 71 160 9.33e-12 67.0
Msa1082290 AT4G10890.1 37.363 91 48 2 227 309 71 160 9.33e-12 67.0
Msa1082290 AT4G10890.2 37.363 91 48 2 227 309 71 160 9.33e-12 67.0

Find 250 sgRNAs with CRISPR-Local

Find 437 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAATATTCAAAATAAATT+TGG 0.149791 7_2:+82366273 Msa1082290:CDS
GGAATTAGAATTTGGGAATT+AGG 0.151861 7_2:-82361160 None:intergenic
CTCAAGCTAAAGGCTCTATT+TGG 0.160329 7_2:-82365068 None:intergenic
ATGTGATTGGAATTAGAATT+TGG 0.171341 7_2:-82361168 None:intergenic
AAAGGCTCTATTTGGGAATT+TGG 0.188966 7_2:-82365060 None:intergenic
TTTCCAGGACTTGCATATTA+TGG 0.205433 7_2:+82364557 Msa1082290:five_prime_UTR
ATGATAGGGACTTGCATATT+AGG 0.208910 7_2:+82364411 Msa1082290:five_prime_UTR
GGAGGGAAGGGGAGGGCTTT+GGG 0.215146 7_2:-82365039 None:intergenic
ATGGTACCTGGGCAGGTTTC+TGG 0.219510 7_2:+82364290 Msa1082290:five_prime_UTR
TCAGTGGTTCTTACTACTTT+AGG 0.220592 7_2:+82364753 Msa1082290:five_prime_UTR
AATGTTTCTTTCAGTTTCTT+TGG 0.228428 7_2:+82362512 Msa1082290:intron
CAGTGGTTCTTACTACTTTA+GGG 0.240943 7_2:+82364754 Msa1082290:five_prime_UTR
GTTTGAAAATAAGTTGTAAA+AGG 0.257674 7_2:+82365258 Msa1082290:five_prime_UTR
CAAAATAAATTTGGAAAATC+AGG 0.262900 7_2:+82366282 Msa1082290:CDS
TACTACTTTAGGGTCTGTTT+GGG 0.267738 7_2:+82364764 Msa1082290:five_prime_UTR
TGGAGGGAAGGGGAGGGCTT+TGG 0.268556 7_2:-82365040 None:intergenic
AGGCACTTGTTATGTTTCTT+TGG 0.272471 7_2:+82366226 Msa1082290:CDS
AAAGATCAAATTCGTTATAT+TGG 0.275852 7_2:+82366498 Msa1082290:CDS
AACGCTCGACTCAGCCTTTC+TGG 0.282001 7_2:-82364344 None:intergenic
TTACTACTTTAGGGTCTGTT+TGG 0.283952 7_2:+82364763 Msa1082290:five_prime_UTR
CGACGACGTTATTGTTGATT+TGG 0.287066 7_2:+82362577 Msa1082290:five_prime_UTR
GTAATAGCCAAGTCCCTATC+AGG 0.290116 7_2:-82364150 None:intergenic
GAGGGAAGGGGAGGGCTTTG+GGG 0.293234 7_2:-82365038 None:intergenic
GGGAGGGTTCCCACATGCTT+GGG 0.297322 7_2:+82364697 Msa1082290:five_prime_UTR
AGGACTTGAACCCTGTTTCC+AGG 0.304233 7_2:+82364542 Msa1082290:five_prime_UTR
GATAGATATCCTTTCATGTT+TGG 0.305736 7_2:-82366813 None:intergenic
TAAATAAATATTATAATTGT+TGG 0.309551 7_2:-82364126 None:intergenic
TAATATTTATTTACCCTGAT+AGG 0.311002 7_2:+82364136 Msa1082290:five_prime_UTR
GTGTAGGGCTTATAAGAAAA+TGG 0.313675 7_2:-82363856 None:intergenic
AACCCTTGAAGATTTGTATA+TGG 0.319394 7_2:+82362604 Msa1082290:five_prime_UTR
GAATTAGAATTTGGGAATTA+GGG 0.327716 7_2:-82361159 None:intergenic
GATAGGGACTTGGCTATTAC+TGG 0.327855 7_2:+82364153 Msa1082290:five_prime_UTR
GAGCTATGCATATGGTCATT+TGG 0.329111 7_2:-82364732 None:intergenic
GTCATTTGTTGAAACATTCC+AGG 0.330187 7_2:-82363367 None:intergenic
TTATTAGCTTCTTCATTTCC+CGG 0.331012 7_2:-82361493 None:intergenic
TCATTTCCCGGATTCTTATC+AGG 0.331429 7_2:-82361481 None:intergenic
AAGGATGTCATTTCATTTGA+TGG 0.331593 7_2:-82366201 None:intergenic
CGGGAAGGGGTCCCACCATT+TGG 0.331935 7_2:+82364472 Msa1082290:five_prime_UTR
CCGATGCATCCTTCAAAATA+AGG 0.333834 7_2:-82366435 None:intergenic
CCAAAATCAAGGATGATAAA+AGG 0.337603 7_2:+82366406 Msa1082290:CDS
TGAAAAGTTATTAGTGAGTA+AGG 0.345922 7_2:+82366167 Msa1082290:CDS
TTTATTCTCATGGATGGACT+TGG 0.346008 7_2:+82366070 Msa1082290:CDS
CGGGAGGGTTCCCACATGCT+TGG 0.347864 7_2:+82364696 Msa1082290:five_prime_UTR
GTTTCTTTCTTCTTCTTGTT+CGG 0.348316 7_2:-82367123 None:intergenic
TGTGATTGGAATTAGAATTT+GGG 0.350143 7_2:-82361167 None:intergenic
CACTCAAGCACTTGGGAGTT+GGG 0.350723 7_2:-82364259 None:intergenic
AGAATTTGGGAATTAGGGTT+TGG 0.351219 7_2:-82361154 None:intergenic
AGCAAAAGGCTCACTTTGAT+TGG 0.352124 7_2:+82360974 None:intergenic
AAGTTGTAAAAGGGAACTTT+AGG 0.356330 7_2:+82365268 Msa1082290:five_prime_UTR
GGGAATTTGGAGGGAAGGGG+AGG 0.358183 7_2:-82365047 None:intergenic
TCTCTCCGAAACGCAATCTC+AGG 0.359226 7_2:-82361198 None:intergenic
AATATGCAAGTCCTGGAAAC+AGG 0.360054 7_2:-82364553 None:intergenic
AGGGAAGGGGAGGGCTTTGG+GGG 0.364890 7_2:-82365037 None:intergenic
TCTTGTTTGATTAGTGGAAA+TGG 0.370259 7_2:-82366999 None:intergenic
CTCAGGGATTTCGATGTGAT+TGG 0.371305 7_2:-82361181 None:intergenic
TTGAAAGAACAATTGGTGTT+TGG 0.373420 7_2:+82366943 Msa1082290:CDS
TTACACAAGAGGCTGTTTCC+AGG 0.376147 7_2:+82364522 Msa1082290:five_prime_UTR
TTGCTGCCGCCGCTGACCAT+TGG 0.378105 7_2:+82365480 Msa1082290:five_prime_UTR
CAAATGGTGGGACCCCTTCC+CGG 0.384190 7_2:-82364471 None:intergenic
AGCTATGCATATGGTCATTT+GGG 0.385652 7_2:-82364731 None:intergenic
AGCTTTATTAAAATTGTGTT+TGG 0.386282 7_2:-82365184 None:intergenic
AGAAATATTTATGATAAGTA+TGG 0.388738 7_2:+82361982 Msa1082290:five_prime_UTR
GAATTTGGGAATTAGGGTTT+GGG 0.392506 7_2:-82361153 None:intergenic
ATTCGTTATATTGGCAGAAA+AGG 0.394672 7_2:+82366507 Msa1082290:CDS
ACAGAGAAGGAACAACAATT+TGG 0.396887 7_2:-82361249 None:intergenic
AATAGATTTCTTTATTCTCA+TGG 0.401795 7_2:+82366060 Msa1082290:CDS
AAATAAATATTATAATTGTT+GGG 0.403157 7_2:-82364125 None:intergenic
TTTGGGAATTTGGAGGGAAG+GGG 0.404402 7_2:-82365050 None:intergenic
TGATAGGGACTTGCATATTA+GGG 0.405045 7_2:+82364412 Msa1082290:five_prime_UTR
TTGATGCGCCATTGAAGATT+CGG 0.405772 7_2:-82361222 None:intergenic
TTTCCGCGAAGACTTGACTA+TGG 0.405938 7_2:-82361041 None:intergenic
GGGGTTTAGGATGGGAGGGG+AGG 0.413598 7_2:+82364785 Msa1082290:five_prime_UTR
GCATATGCAGGGTCCGGGAA+GGG 0.413809 7_2:+82364458 Msa1082290:five_prime_UTR
CATATGCAGGGTCCGGGAAG+GGG 0.415211 7_2:+82364459 Msa1082290:five_prime_UTR
TCTCTGACTAAGAGCATGTT+TGG 0.416014 7_2:+82365115 Msa1082290:five_prime_UTR
GAGGTTTATCACAGGCAAAT+CGG 0.416921 7_2:+82363343 Msa1082290:five_prime_UTR
CTTAAGAGAAGTGCTATGAT+AGG 0.417041 7_2:+82364396 Msa1082290:five_prime_UTR
GTCACTGTTGATATTGAGAA+AGG 0.417431 7_2:+82363747 Msa1082290:five_prime_UTR
GATTTCTTTATTCTCATGGA+TGG 0.422850 7_2:+82366064 Msa1082290:CDS
AATGTCATTGAAAGAACAAT+TGG 0.424218 7_2:+82366936 Msa1082290:CDS
GGATGCATCGGTGCTATAGA+TGG 0.428232 7_2:+82366447 Msa1082290:CDS
ATAACGAATTTGATCTTTAG+TGG 0.428819 7_2:-82366493 None:intergenic
AAGATGAGGAATTCAACAAA+TGG 0.433819 7_2:+82367078 Msa1082290:CDS
CATGCCGCTGGTGGAGGAAG+AGG 0.435113 7_2:+82362024 Msa1082290:five_prime_UTR
TGGAAACAGGGTTCAAGTCC+TGG 0.435412 7_2:-82364540 None:intergenic
CATAACTTTATTCGAATATG+TGG 0.436332 7_2:+82367050 Msa1082290:CDS
TTTGTTGTTGTTGGTTGGCC+TGG 0.437222 7_2:+82366582 Msa1082290:CDS
TTCATAAGCACTCAAGCACT+TGG 0.437805 7_2:-82364267 None:intergenic
TGACTTCCATCTCTAAAATC+AGG 0.439770 7_2:-82366864 None:intergenic
TTCACTAAACTTCCTACTTA+CGG 0.442099 7_2:-82366310 None:intergenic
AGGTTTATCACAGGCAAATC+GGG 0.442881 7_2:+82363344 Msa1082290:five_prime_UTR
GTATCATCCTGATAAGAATC+CGG 0.445522 7_2:+82361474 Msa1082290:five_prime_UTR
TCAAGCTAAAGGCTCTATTT+GGG 0.448227 7_2:-82365067 None:intergenic
AAGTTATAATATGTTTAGAA+TGG 0.452044 7_2:+82366122 Msa1082290:CDS
TTATGAAATGGTACCTGGGC+AGG 0.452355 7_2:+82364283 Msa1082290:five_prime_UTR
TTTCTTTCAGTTTCTTTGGC+GGG 0.452768 7_2:+82362516 Msa1082290:intron
CAATTGGTGTTTGGAAGAAA+AGG 0.453010 7_2:+82366952 Msa1082290:CDS
TGATATCTTTCACCTTTGTA+TGG 0.453127 7_2:-82366837 None:intergenic
CTTAAAAGCTAGCTATCAAA+GGG 0.453827 7_2:-82364228 None:intergenic
TAAATGTGACCGCACCTTCA+AGG 0.454412 7_2:-82362633 None:intergenic
ATTTCTGTGAAGTTAAAATC+AGG 0.456747 7_2:-82366378 None:intergenic
AATATTTATTTACCCTGATA+GGG 0.457813 7_2:+82364137 Msa1082290:five_prime_UTR
TTTGAAAATAAGTTGTAAAA+GGG 0.459303 7_2:+82365259 Msa1082290:five_prime_UTR
AAGAGAAGTGGAAAATAAGT+AGG 0.460666 7_2:-82365139 None:intergenic
CACCCATATACAAATCTTCA+AGG 0.462023 7_2:-82362607 None:intergenic
ATTGAAGCTCCCGCATATGC+AGG 0.465215 7_2:+82364446 Msa1082290:five_prime_UTR
GCTCCCGCATATGCAGGGTC+CGG 0.466464 7_2:+82364452 Msa1082290:five_prime_UTR
TCAAGGATGATAAAAGGTAT+TGG 0.467904 7_2:+82366412 Msa1082290:CDS
TATGATAAGTATGGTGAAGA+GGG 0.468509 7_2:+82361991 Msa1082290:five_prime_UTR
TATTTACCCTGATAGGGACT+TGG 0.470246 7_2:+82364143 Msa1082290:five_prime_UTR
CGCATATGCAGGGTCCGGGA+AGG 0.471383 7_2:+82364457 Msa1082290:five_prime_UTR
AATGTTGTAAAGCCAGCTCC+TGG 0.471578 7_2:+82363295 Msa1082290:five_prime_UTR
TTCCCGGACCCTGCATATGC+GGG 0.471788 7_2:-82364455 None:intergenic
GTATATGGGTGGTTCCTTGA+AGG 0.471939 7_2:+82362619 Msa1082290:five_prime_UTR
GCACTCAAGCACTTGGGAGT+TGG 0.472201 7_2:-82364260 None:intergenic
AGTGCATCCATTGAGTCGTT+TGG 0.472248 7_2:+82364371 Msa1082290:five_prime_UTR
TTCTTTCAGTTTCTTTGGCG+GGG 0.473982 7_2:+82362517 Msa1082290:intron
TGTGGCAGAAAGCATTGAAA+TGG 0.474935 7_2:-82365450 None:intergenic
ACCCTTGAAGATTTGTATAT+GGG 0.478838 7_2:+82362605 Msa1082290:five_prime_UTR
TGCACATTCGATTCCCGCAC+AGG 0.479263 7_2:+82365319 Msa1082290:five_prime_UTR
TCTTTAGTGGGAACAATGGC+AGG 0.479573 7_2:-82366480 None:intergenic
CGTGTGTCATGCGCAGTACC+AGG 0.480441 7_2:-82366600 None:intergenic
ATCAAATGAAATGACATCCT+TGG 0.482116 7_2:+82366203 Msa1082290:CDS
CCGCCGCTGACCATTGGTGC+AGG 0.483450 7_2:+82365486 Msa1082290:five_prime_UTR
CTTCCCGGACCCTGCATATG+CGG 0.484509 7_2:-82364456 None:intergenic
GGAGAGATCCGAATCTTCAA+TGG 0.487027 7_2:+82361214 Msa1082290:five_prime_UTR
GAAAGGCATGAAAGATGGCC+AGG 0.488282 7_2:+82363764 Msa1082290:five_prime_UTR
TCTTAGAAGTAGAAGAGAAG+TGG 0.488349 7_2:-82365151 None:intergenic
TATCACAGGCAAATCGGGCC+TGG 0.488499 7_2:+82363349 Msa1082290:five_prime_UTR
TTAAGTGCCAAACGACTCAA+TGG 0.488658 7_2:-82364378 None:intergenic
AAGCAGCATGCCGCTGGTGG+AGG 0.488986 7_2:+82362018 Msa1082290:five_prime_UTR
TTATTCTCATGGATGGACTT+GGG 0.490962 7_2:+82366071 Msa1082290:CDS
CTCCCGCATATGCAGGGTCC+GGG 0.491023 7_2:+82364453 Msa1082290:five_prime_UTR
GGCTCTATTTGGGAATTTGG+AGG 0.492451 7_2:-82365057 None:intergenic
GTTTCTTTCAGTTTCTTTGG+CGG 0.494548 7_2:+82362515 Msa1082290:intron
GGAATTTGGAGGGAAGGGGA+GGG 0.495552 7_2:-82365046 None:intergenic
GTGCTAATGTCAAATACGTA+AGG 0.495722 7_2:+82363712 Msa1082290:five_prime_UTR
AACAAATGGGAGCATATCAC+TGG 0.496218 7_2:+82367092 Msa1082290:CDS
AGTGCTTATGAAATGGTACC+TGG 0.497257 7_2:+82364278 Msa1082290:five_prime_UTR
AGAAATTCCGTCCAAAATCA+AGG 0.499052 7_2:+82366395 Msa1082290:CDS
AGGATGTCATTTCATTTGAT+GGG 0.500165 7_2:-82366200 None:intergenic
TCCCGTAAAACTAGCTGCCA+TGG 0.501769 7_2:-82364678 None:intergenic
GTTGCTGCTGTCAGCATATG+AGG 0.502282 7_2:+82361939 Msa1082290:intron
AGAAGCTAATAAGAAATTTG+CGG 0.505990 7_2:+82361504 Msa1082290:five_prime_UTR
TCGAATAGCCACTAAGCTGT+TGG 0.507372 7_2:+82367214 Msa1082290:CDS
ACTACTTTAGGGTCTGTTTG+GGG 0.509784 7_2:+82364765 Msa1082290:five_prime_UTR
TAGACATGCTTATAAGTGTA+GGG 0.510005 7_2:-82363871 None:intergenic
AAATCCCTGAGATTGCGTTT+CGG 0.510468 7_2:+82361193 Msa1082290:five_prime_UTR
ACTCCATAATATGCAAGTCC+TGG 0.513730 7_2:-82364560 None:intergenic
AGATGAGGAATTCAACAAAT+GGG 0.514979 7_2:+82367079 Msa1082290:CDS
TATCATCCTGATAAGAATCC+GGG 0.516808 7_2:+82361475 Msa1082290:five_prime_UTR
CTTCTACTTCTAAGAAGAAG+TGG 0.516823 7_2:+82365159 Msa1082290:five_prime_UTR
ATTTGGGAATTTGGAGGGAA+GGG 0.517490 7_2:-82365051 None:intergenic
ATCGTACCTTCAGGAGGATG+AGG 0.519382 7_2:-82366663 None:intergenic
ATGCGGGAGCTTCAATGCAC+CGG 0.520143 7_2:-82364439 None:intergenic
TAACGAATTTGATCTTTAGT+GGG 0.520302 7_2:-82366492 None:intergenic
TTAGACATGCTTATAAGTGT+AGG 0.523976 7_2:-82363872 None:intergenic
AATAATTTAAGAGTACAAGA+TGG 0.524258 7_2:+82367167 Msa1082290:CDS
GCCGCTGGTGGAGGAAGAGG+TGG 0.524267 7_2:+82362027 Msa1082290:five_prime_UTR
TGAATATATATGGCCTGTGC+GGG 0.526918 7_2:-82365332 None:intergenic
GCTGGTGGAGGAAGAGGTGG+TGG 0.526997 7_2:+82362030 Msa1082290:five_prime_UTR
GTCAGCATATGAGGTATTGT+CGG 0.527426 7_2:+82361948 Msa1082290:intron
GAACCACTGAGCTATGCATA+TGG 0.527856 7_2:-82364740 None:intergenic
TTGAAGCAGCATGCCGCTGG+TGG 0.528180 7_2:+82362015 Msa1082290:five_prime_UTR
AGAGAAGTGGAAAATAAGTA+GGG 0.528532 7_2:-82365138 None:intergenic
GGTTTGAAGCAGCATGCCGC+TGG 0.535682 7_2:+82362012 Msa1082290:five_prime_UTR
ATTGTAATTATCAGGTTTGG+AGG 0.539622 7_2:+82363266 Msa1082290:intron
TCTTTCAGTTTCTTTGGCGG+GGG 0.541453 7_2:+82362518 Msa1082290:intron
TATTTGGGAATTTGGAGGGA+AGG 0.544033 7_2:-82365052 None:intergenic
CCTTAAAAGCTAGCTATCAA+AGG 0.545555 7_2:-82364229 None:intergenic
GGCGGCAGCAAGCATATGTG+TGG 0.546083 7_2:-82365468 None:intergenic
ATGCGATGCTCTAATTAGCT+TGG 0.546519 7_2:+82364200 Msa1082290:five_prime_UTR
CTACTTTAGGGTCTGTTTGG+GGG 0.548229 7_2:+82364766 Msa1082290:five_prime_UTR
ACAAACTTTAAAAGTTTACC+TGG 0.548928 7_2:-82363782 None:intergenic
ATTGAGAAAGGCATGAAAGA+TGG 0.548944 7_2:+82363759 Msa1082290:five_prime_UTR
CGAGAAACTCTTAACACTCC+AGG 0.549776 7_2:+82366096 Msa1082290:CDS
GAAAAGTTATTAGTGAGTAA+GGG 0.550369 7_2:+82366168 Msa1082290:CDS
CTTGAAGATTTGTATATGGG+TGG 0.550525 7_2:+82362608 Msa1082290:five_prime_UTR
GCTGCGTACAATAAACCAAA+TGG 0.551422 7_2:-82364487 None:intergenic
AAACATAACAAGTGCCTCCA+AGG 0.552641 7_2:-82366220 None:intergenic
ACTCCATAGTCAAGTCTTCG+CGG 0.553039 7_2:+82361038 Msa1082290:five_prime_UTR
AGGACGTTAAGCGGAAGGAA+TGG 0.553747 7_2:+82364805 Msa1082290:five_prime_UTR
TTGTAATTATCAGGTTTGGA+GGG 0.555966 7_2:+82363267 Msa1082290:intron
GTGCTTGAGTGCTTATGAAA+TGG 0.559470 7_2:+82364271 Msa1082290:five_prime_UTR
ATAATTTAAGAGTACAAGAT+GGG 0.562353 7_2:+82367168 Msa1082290:CDS
TTCTACTTCTAAGAAGAAGT+GGG 0.568552 7_2:+82365160 Msa1082290:five_prime_UTR
TTAAGAGAAGTGCTATGATA+GGG 0.572038 7_2:+82364397 Msa1082290:five_prime_UTR
AAATGAAATGACATCCTTGG+AGG 0.574238 7_2:+82366206 Msa1082290:CDS
TTATGATAAGTATGGTGAAG+AGG 0.574404 7_2:+82361990 Msa1082290:five_prime_UTR
GTTTCAACAAATGACAGAGC+AGG 0.577760 7_2:+82363375 Msa1082290:five_prime_UTR
AGGGGAGGACGTTAAGCGGA+AGG 0.578100 7_2:+82364800 Msa1082290:five_prime_UTR
GGAGGGTTCCCACATGCTTG+GGG 0.579895 7_2:+82364698 Msa1082290:five_prime_UTR
CCCGTAAAACTAGCTGCCAT+GGG 0.580233 7_2:-82364677 None:intergenic
AGTACAAGATGGGAGCTACA+TGG 0.581291 7_2:+82367178 Msa1082290:CDS
AATTCAGCACCCCAAGCATG+TGG 0.582677 7_2:-82364707 None:intergenic
CTCTCCGAAACGCAATCTCA+GGG 0.582900 7_2:-82361197 None:intergenic
GCTCTATTTGGGAATTTGGA+GGG 0.585552 7_2:-82365056 None:intergenic
TGCGGGAGCTTCAATGCACC+GGG 0.586960 7_2:-82364438 None:intergenic
GTGTTCCCTCATCCTCCTGA+AGG 0.587543 7_2:+82366657 Msa1082290:CDS
AGTTATTAGTGAGTAAGGGA+TGG 0.587901 7_2:+82366172 Msa1082290:CDS
AATCGCTTCTTCTATTACGA+CGG 0.588377 7_2:-82361095 None:intergenic
GCAGGATATCCAAACATGAA+AGG 0.592144 7_2:+82366804 Msa1082290:intron
TACTAGCAAAAGAAATTGTG+AGG 0.592380 7_2:+82366352 Msa1082290:CDS
GCGTACAATAAACCAAATGG+TGG 0.595100 7_2:-82364484 None:intergenic
TTGATCTTTAGTGGGAACAA+TGG 0.595253 7_2:-82366484 None:intergenic
ACGTTAAGCGGAAGGAATGG+AGG 0.596875 7_2:+82364808 Msa1082290:five_prime_UTR
TTGGTGTTTGGAAGAAAAGG+TGG 0.597185 7_2:+82366955 Msa1082290:CDS
AAGACACCAGAAACCTGCCC+AGG 0.597393 7_2:-82364296 None:intergenic
ACGCTGTAACTGTAGAAATG+AGG 0.598744 7_2:+82363324 Msa1082290:five_prime_UTR
TGCTAATGTCAAATACGTAA+GGG 0.599841 7_2:+82363713 Msa1082290:five_prime_UTR
TCAAGTGTCGAAAGGTGCAT+CGG 0.599920 7_2:+82361411 Msa1082290:five_prime_UTR
TTGAGTTTCCCCAAATTAGG+GGG 0.600083 7_2:-82364882 None:intergenic
AACATATTATAACTTTCACC+TGG 0.606376 7_2:-82366114 None:intergenic
TCGTACCTTCAGGAGGATGA+GGG 0.607036 7_2:-82366662 None:intergenic
ATGAATATATATGGCCTGTG+CGG 0.607309 7_2:-82365333 None:intergenic
AATCAGGAGAGACCGTAAGT+AGG 0.608714 7_2:+82366298 Msa1082290:CDS
AATAGCATAGAGCACAGAGA+AGG 0.608834 7_2:-82361262 None:intergenic
AATATGTGGCGTTCAAGATG+AGG 0.609133 7_2:+82367064 Msa1082290:CDS
TCATAAGCACTCAAGCACTT+GGG 0.609608 7_2:-82364266 None:intergenic
CGTTAAGCGGAAGGAATGGA+GGG 0.610996 7_2:+82364809 Msa1082290:five_prime_UTR
ACCACCTCTTCCTCCACCAG+CGG 0.613282 7_2:-82362028 None:intergenic
AAATTTGCGGAGATTAGCAA+TGG 0.617908 7_2:+82361517 Msa1082290:five_prime_UTR
GTAGAAATGAGGTTTATCAC+AGG 0.618569 7_2:+82363335 Msa1082290:five_prime_UTR
AATGTCAAATACGTAAGGGA+GGG 0.618582 7_2:+82363717 Msa1082290:five_prime_UTR
TTGAAGCTCCCGCATATGCA+GGG 0.619011 7_2:+82364447 Msa1082290:five_prime_UTR
AGGTGGTGGAATGAACATGC+AGG 0.620609 7_2:+82362044 Msa1082290:five_prime_UTR
TGGAAGAGATATATATGACT+AGG 0.622927 7_2:-82365430 None:intergenic
TCTGTGAAGTTAAAATCAGG+AGG 0.623384 7_2:-82366375 None:intergenic
ATATGCAAGTCCTGGAAACA+GGG 0.626986 7_2:-82364552 None:intergenic
CCTGCACCAATGGTCAGCGG+CGG 0.632484 7_2:-82365486 None:intergenic
GAAGAAGAGAAAATTGCGAA+AGG 0.633709 7_2:+82362554 Msa1082290:five_prime_UTR
TAATGTCAAATACGTAAGGG+AGG 0.634516 7_2:+82363716 Msa1082290:five_prime_UTR
ACCCATATACAAATCTTCAA+GGG 0.634761 7_2:-82362606 None:intergenic
GATATACTTCAAGTGTCGAA+AGG 0.635494 7_2:+82361403 Msa1082290:five_prime_UTR
TAATAGCCAAGTCCCTATCA+GGG 0.637080 7_2:-82364149 None:intergenic
TTTGAGTTTCCCCAAATTAG+GGG 0.643069 7_2:-82364883 None:intergenic
AAACTAATCGTACCTTCAGG+AGG 0.646709 7_2:-82366669 None:intergenic
AAAGCTAGCTATCAAAGGGG+AGG 0.657466 7_2:-82364224 None:intergenic
CGTACAATAAACCAAATGGT+GGG 0.662155 7_2:-82364483 None:intergenic
ACTTGCATATTAGGGCAACC+CGG 0.662477 7_2:+82364420 Msa1082290:five_prime_UTR
ATATGGAAGAGACACCAGAA+AGG 0.664416 7_2:+82364330 Msa1082290:five_prime_UTR
TGGGAGGGGAGGACGTTAAG+CGG 0.665005 7_2:+82364796 Msa1082290:five_prime_UTR
ATTCAGCACCCCAAGCATGT+GGG 0.671986 7_2:-82364706 None:intergenic
GTACCTGCACCAATGGTCAG+CGG 0.679994 7_2:-82365489 None:intergenic
GGATATCTATCACCATACAA+AGG 0.686019 7_2:+82366825 Msa1082290:CDS
TGACCATATGCATAGCTCAG+TGG 0.687396 7_2:+82364737 Msa1082290:five_prime_UTR
AGAGATGGAAGTCAAGCACA+AGG 0.688504 7_2:+82366873 Msa1082290:CDS
TCTACTTCTAAGAAGAAGTG+GGG 0.720020 7_2:+82365161 Msa1082290:five_prime_UTR
GTGCTTATGAAATGGTACCT+GGG 0.724826 7_2:+82364279 Msa1082290:five_prime_UTR
TTAAAAGCTAGCTATCAAAG+GGG 0.773341 7_2:-82364227 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAAATAATATATGTTTA+TGG + chr7_2:82362211-82362230 Msa1082290:intron 10.0%
!!! TTTTATTTATGATTTTCTAT+TGG - chr7_2:82362889-82362908 None:intergenic 10.0%
!! AAAATATACATACTAAAAAA+TGG - chr7_2:82363454-82363473 None:intergenic 10.0%
!! TATATTAAATTAAACATTTC+TGG - chr7_2:82363542-82363561 None:intergenic 10.0%
!! AATTAAATGTTTATTCTAAA+TGG - chr7_2:82365845-82365864 None:intergenic 10.0%
!!! ATGTTTTATAAAATATGTTA+TGG + chr7_2:82365985-82366004 Msa1082290:CDS 10.0%
!!! TGTTTTATAAAATATGTTAT+GGG + chr7_2:82365986-82366005 Msa1082290:CDS 10.0%
!! AGAAATATTCAAAATAAATT+TGG + chr7_2:82366273-82366292 Msa1082290:CDS 10.0%
!!! ATATTTTCATAAGCTATATT+AGG + chr7_2:82361756-82361775 Msa1082290:intron 15.0%
!!! TATTTTCATAAGCTATATTA+GGG + chr7_2:82361757-82361776 Msa1082290:intron 15.0%
!! AGAAATATTTATGATAAGTA+TGG + chr7_2:82361982-82362001 Msa1082290:five_prime_UTR 15.0%
!! AATGACTATATTAAAATTTG+TGG - chr7_2:82362358-82362377 None:intergenic 15.0%
!! TGTATTTAATTATTTACCAA+TGG + chr7_2:82362692-82362711 Msa1082290:intron 15.0%
!! GTATTTAATTATTTACCAAT+GGG + chr7_2:82362693-82362712 Msa1082290:intron 15.0%
!! ATTATTGTATTGTAATTATC+AGG + chr7_2:82363258-82363277 Msa1082290:intron 15.0%
!!! CATAAATTTTTGCAAATATT+CGG - chr7_2:82363651-82363670 None:intergenic 15.0%
!! TTTGAAAATAAGTTGTAAAA+GGG + chr7_2:82365259-82365278 Msa1082290:five_prime_UTR 15.0%
!!! GTTTTATAAAATATGTTATG+GGG + chr7_2:82365987-82366006 Msa1082290:CDS 15.0%
!! AAGTTATAATATGTTTAGAA+TGG + chr7_2:82366122-82366141 Msa1082290:CDS 15.0%
!! TTTGCTTATAAATCTATGTT+TGG + chr7_2:82361360-82361379 Msa1082290:intron 20.0%
!! TACATAAACACTTATATGAT+AGG - chr7_2:82361675-82361694 None:intergenic 20.0%
!! AGTGAAAATGTTTACTTATA+AGG + chr7_2:82361727-82361746 Msa1082290:intron 20.0%
!!! ATTTTCATAAGCTATATTAG+GGG + chr7_2:82361758-82361777 Msa1082290:intron 20.0%
!! ACATTTCAGATATGTATTAT+CGG + chr7_2:82362138-82362157 Msa1082290:intron 20.0%
!!! TACTTTATTTTTACTTGCAT+TGG + chr7_2:82362166-82362185 Msa1082290:intron 20.0%
!!! TTGTATGCTAATTTTTAGTA+TGG + chr7_2:82362451-82362470 Msa1082290:intron 20.0%
!!! TGTATGCTAATTTTTAGTAT+GGG + chr7_2:82362452-82362471 Msa1082290:intron 20.0%
!! TGAAAGAAACATTCATATTT+CGG - chr7_2:82362505-82362524 None:intergenic 20.0%
!! TTGAATAATATACTAGTAGA+TGG + chr7_2:82362779-82362798 Msa1082290:intron 20.0%
!! TGAATAATATACTAGTAGAT+GGG + chr7_2:82362780-82362799 Msa1082290:intron 20.0%
!!! ATATCTGAGATTTATCAAAA+GGG - chr7_2:82363031-82363050 None:intergenic 20.0%
!!! AATATCTGAGATTTATCAAA+AGG - chr7_2:82363032-82363051 None:intergenic 20.0%
!!! AACTTTTAAAGTTTGTATGT+AGG + chr7_2:82363789-82363808 Msa1082290:five_prime_UTR 20.0%
!! TAATATTTATTTACCCTGAT+AGG + chr7_2:82364136-82364155 Msa1082290:five_prime_UTR 20.0%
!! AATATTTATTTACCCTGATA+GGG + chr7_2:82364137-82364156 Msa1082290:five_prime_UTR 20.0%
!! TGTCTTAGAAAAACTATATA+TGG + chr7_2:82364313-82364332 Msa1082290:five_prime_UTR 20.0%
!!! TATTAGAAGAGAATTTTGAA+GGG + chr7_2:82364909-82364928 Msa1082290:five_prime_UTR 20.0%
!!! CCAAAATAACTTGAATTTTT+TGG - chr7_2:82365094-82365113 None:intergenic 20.0%
!!! CCAAAAAATTCAAGTTATTT+TGG + chr7_2:82365091-82365110 Msa1082290:five_prime_UTR 20.0%
!!! AGCTTTATTAAAATTGTGTT+TGG - chr7_2:82365187-82365206 None:intergenic 20.0%
!! GTTTGAAAATAAGTTGTAAA+AGG + chr7_2:82365258-82365277 Msa1082290:five_prime_UTR 20.0%
!! ATGTACAGTAATATATCATA+AGG - chr7_2:82365584-82365603 None:intergenic 20.0%
!! TATGATATATTACTGTACAT+AGG + chr7_2:82365584-82365603 Msa1082290:intron 20.0%
!!! ACACATACTGAATTTAATTT+GGG - chr7_2:82365692-82365711 None:intergenic 20.0%
!! AACACATACTGAATTTAATT+TGG - chr7_2:82365693-82365712 None:intergenic 20.0%
!! ATAGATCTAACAAAACTAAT+AGG - chr7_2:82365815-82365834 None:intergenic 20.0%
!! AATAGATTTCTTTATTCTCA+TGG + chr7_2:82366060-82366079 Msa1082290:CDS 20.0%
!! CAAAATAAATTTGGAAAATC+AGG + chr7_2:82366282-82366301 Msa1082290:CDS 20.0%
!! AAAGATCAAATTCGTTATAT+TGG + chr7_2:82366498-82366517 Msa1082290:CDS 20.0%
!!! AATAATTTAAGAGTACAAGA+TGG + chr7_2:82367167-82367186 Msa1082290:CDS 20.0%
!!! ATAATTTAAGAGTACAAGAT+GGG + chr7_2:82367168-82367187 Msa1082290:CDS 20.0%
! GAATTAGAATTTGGGAATTA+GGG - chr7_2:82361162-82361181 None:intergenic 25.0%
! TGTGATTGGAATTAGAATTT+GGG - chr7_2:82361170-82361189 None:intergenic 25.0%
! ATGTGATTGGAATTAGAATT+TGG - chr7_2:82361171-82361190 None:intergenic 25.0%
! AGGAAAACAGAAAAATTACA+CGG - chr7_2:82361303-82361322 None:intergenic 25.0%
! AGAAGCTAATAAGAAATTTG+CGG + chr7_2:82361504-82361523 Msa1082290:five_prime_UTR 25.0%
!! TTTTCATAAGCTATATTAGG+GGG + chr7_2:82361759-82361778 Msa1082290:intron 25.0%
!!! ATTAAGTTGAAAACAGCTTA+TGG + chr7_2:82361791-82361810 Msa1082290:intron 25.0%
! ACCATCAATAACCAAAATAA+GGG - chr7_2:82361908-82361927 None:intergenic 25.0%
! AACCATCAATAACCAAAATA+AGG - chr7_2:82361909-82361928 None:intergenic 25.0%
! ATTATCACACTAACTGTAAT+CGG + chr7_2:82362272-82362291 Msa1082290:intron 25.0%
! GAATCAATAAAACCATATGA+AGG - chr7_2:82362300-82362319 None:intergenic 25.0%
!!! GTATGCTAATTTTTAGTATG+GGG + chr7_2:82362453-82362472 Msa1082290:intron 25.0%
! AATGTTTCTTTCAGTTTCTT+TGG + chr7_2:82362512-82362531 Msa1082290:intron 25.0%
!! GTATTTTCATTGAGAAAATC+AGG + chr7_2:82363081-82363100 Msa1082290:intron 25.0%
! TGTATTGTAATTATCAGGTT+TGG + chr7_2:82363263-82363282 Msa1082290:intron 25.0%
! AAAAATGGACAAGAATAAAC+AGG - chr7_2:82363439-82363458 None:intergenic 25.0%
!! ACAAACTTTAAAAGTTTACC+TGG - chr7_2:82363785-82363804 None:intergenic 25.0%
!!! GAGTGTTTTTTTGTTTTGAA+TGG + chr7_2:82364579-82364598 Msa1082290:five_prime_UTR 25.0%
!!! TTGTTTTGAATGGAGTATTA+TGG + chr7_2:82364589-82364608 Msa1082290:five_prime_UTR 25.0%
!! CTATTAGAAGAGAATTTTGA+AGG + chr7_2:82364908-82364927 Msa1082290:five_prime_UTR 25.0%
!!! ATTTTCAAACTGACTTCTAT+TGG - chr7_2:82365248-82365267 None:intergenic 25.0%
! CAGTAATATATCATAAGGAA+AGG - chr7_2:82365579-82365598 None:intergenic 25.0%
!!! TGTACATAGGTTTTATACTT+TGG + chr7_2:82365597-82365616 Msa1082290:intron 25.0%
! TGATTACATATGATCTCATA+TGG + chr7_2:82365756-82365775 Msa1082290:intron 25.0%
! AACATATTATAACTTTCACC+TGG - chr7_2:82366117-82366136 None:intergenic 25.0%
! TGAAAAGTTATTAGTGAGTA+AGG + chr7_2:82366167-82366186 Msa1082290:CDS 25.0%
! GAAAAGTTATTAGTGAGTAA+GGG + chr7_2:82366168-82366187 Msa1082290:CDS 25.0%
! ATTTCTGTGAAGTTAAAATC+AGG - chr7_2:82366381-82366400 None:intergenic 25.0%
! TAACGAATTTGATCTTTAGT+GGG - chr7_2:82366495-82366514 None:intergenic 25.0%
! ATAACGAATTTGATCTTTAG+TGG - chr7_2:82366496-82366515 None:intergenic 25.0%
!!! TTAATCACTTTTGTTGTTGT+TGG + chr7_2:82366573-82366592 Msa1082290:CDS 25.0%
!! ACACATTTTTCATTTCTTCA+AGG - chr7_2:82366641-82366660 None:intergenic 25.0%
!!! ATTTCTAGGAAAGTATTACT+TGG + chr7_2:82366776-82366795 Msa1082290:intron 25.0%
! AATGTCATTGAAAGAACAAT+TGG + chr7_2:82366936-82366955 Msa1082290:CDS 25.0%
!!! ATCTTTTCTTGTTTGATTAG+TGG - chr7_2:82367008-82367027 None:intergenic 25.0%
! CATAACTTTATTCGAATATG+TGG + chr7_2:82367050-82367069 Msa1082290:CDS 25.0%
GGAATTAGAATTTGGGAATT+AGG - chr7_2:82361163-82361182 None:intergenic 30.0%
TTTCGAGAAACGGTAATAAA+AGG - chr7_2:82361323-82361342 None:intergenic 30.0%
!! TCAACAACATTTTCGAGAAA+CGG - chr7_2:82361333-82361352 None:intergenic 30.0%
! TTATTAGCTTCTTCATTTCC+CGG - chr7_2:82361496-82361515 None:intergenic 30.0%
TTTCATAAGCTATATTAGGG+GGG + chr7_2:82361760-82361779 Msa1082290:intron 30.0%
!! ATACAAACAGTCCCTTATTT+TGG + chr7_2:82361894-82361913 Msa1082290:intron 30.0%
!!! TCCCTTATTTTGGTTATTGA+TGG + chr7_2:82361904-82361923 Msa1082290:intron 30.0%
TTATGATAAGTATGGTGAAG+AGG + chr7_2:82361990-82362009 Msa1082290:five_prime_UTR 30.0%
TATGATAAGTATGGTGAAGA+GGG + chr7_2:82361991-82362010 Msa1082290:five_prime_UTR 30.0%
GTTAAGAACTAATCAAGCAA+AGG - chr7_2:82362100-82362119 None:intergenic 30.0%
! ATGTGATAGTGTTAACTGAT+AGG - chr7_2:82362122-82362141 None:intergenic 30.0%
CTAAGAAAAGCAGTTATAGA+AGG + chr7_2:82362234-82362253 Msa1082290:intron 30.0%
CATAAAAATTGATGCAGACT+CGG - chr7_2:82362332-82362351 None:intergenic 30.0%
AACCCTTGAAGATTTGTATA+TGG + chr7_2:82362604-82362623 Msa1082290:five_prime_UTR 30.0%
ACCCTTGAAGATTTGTATAT+GGG + chr7_2:82362605-82362624 Msa1082290:five_prime_UTR 30.0%
ACCCATATACAAATCTTCAA+GGG - chr7_2:82362609-82362628 None:intergenic 30.0%
AATATACTAGTAGATGGGTA+TGG + chr7_2:82362785-82362804 Msa1082290:intron 30.0%
ATATACTAGTAGATGGGTAT+GGG + chr7_2:82362786-82362805 Msa1082290:intron 30.0%
AACTAAGAAGAACTGCTTTA+GGG + chr7_2:82362944-82362963 Msa1082290:intron 30.0%
CCATGATAATACATGAATAG+TGG - chr7_2:82363118-82363137 None:intergenic 30.0%
CCACTATTCATGTATTATCA+TGG + chr7_2:82363115-82363134 Msa1082290:intron 30.0%
ATTGTAATTATCAGGTTTGG+AGG + chr7_2:82363266-82363285 Msa1082290:intron 30.0%
TTGTAATTATCAGGTTTGGA+GGG + chr7_2:82363267-82363286 Msa1082290:intron 30.0%
GACATTTCATTGTATGATTG+TGG + chr7_2:82363513-82363532 Msa1082290:intron 30.0%
!!! TTTTTTCCTTATGTGCTTGA+GGG + chr7_2:82363591-82363610 Msa1082290:intron 30.0%
TGCTAATGTCAAATACGTAA+GGG + chr7_2:82363713-82363732 Msa1082290:five_prime_UTR 30.0%
TAGACATGCTTATAAGTGTA+GGG - chr7_2:82363874-82363893 None:intergenic 30.0%
TTAGACATGCTTATAAGTGT+AGG - chr7_2:82363875-82363894 None:intergenic 30.0%
TTAAAAGCTAGCTATCAAAG+GGG - chr7_2:82364230-82364249 None:intergenic 30.0%
CTTAAAAGCTAGCTATCAAA+GGG - chr7_2:82364231-82364250 None:intergenic 30.0%
!!! CTTTGATAGCTAGCTTTTAA+GGG + chr7_2:82364230-82364249 Msa1082290:five_prime_UTR 30.0%
!! TTAAGAGAAGTGCTATGATA+GGG + chr7_2:82364397-82364416 Msa1082290:five_prime_UTR 30.0%
!!! TACTTGTTTTAGTCCTTAAG+TGG + chr7_2:82364644-82364663 Msa1082290:five_prime_UTR 30.0%
AATACAAAATCCCCCTAATT+TGG + chr7_2:82364872-82364891 Msa1082290:five_prime_UTR 30.0%
ATACAAAATCCCCCTAATTT+GGG + chr7_2:82364873-82364892 Msa1082290:five_prime_UTR 30.0%
!!! TTTTGAGTTTCCCCAAATTA+GGG - chr7_2:82364887-82364906 None:intergenic 30.0%
!!! ATTTTGAGTTTCCCCAAATT+AGG - chr7_2:82364888-82364907 None:intergenic 30.0%
!!! AATTTTTTGGCTCAAGCTAA+AGG - chr7_2:82365081-82365100 None:intergenic 30.0%
AGAGAAGTGGAAAATAAGTA+GGG - chr7_2:82365141-82365160 None:intergenic 30.0%
AAGAGAAGTGGAAAATAAGT+AGG - chr7_2:82365142-82365161 None:intergenic 30.0%
! TTCTACTTCTAAGAAGAAGT+GGG + chr7_2:82365160-82365179 Msa1082290:five_prime_UTR 30.0%
AAGTTGTAAAAGGGAACTTT+AGG + chr7_2:82365268-82365287 Msa1082290:five_prime_UTR 30.0%
CTTGAAAAGGGAAAAAGAAT+CGG - chr7_2:82365388-82365407 None:intergenic 30.0%
TGGAAGAGATATATATGACT+AGG - chr7_2:82365433-82365452 None:intergenic 30.0%
! AATTTGAATCTGATGATGAC+AGG - chr7_2:82365632-82365651 None:intergenic 30.0%
TCTCATATGGATCTTTATCT+CGG + chr7_2:82365769-82365788 Msa1082290:intron 30.0%
GATTTCTTTATTCTCATGGA+TGG + chr7_2:82366064-82366083 Msa1082290:CDS 30.0%
! AGGATGTCATTTCATTTGAT+GGG - chr7_2:82366203-82366222 None:intergenic 30.0%
! AAGGATGTCATTTCATTTGA+TGG - chr7_2:82366204-82366223 None:intergenic 30.0%
ATCAAATGAAATGACATCCT+TGG + chr7_2:82366203-82366222 Msa1082290:CDS 30.0%
TTCACTAAACTTCCTACTTA+CGG - chr7_2:82366313-82366332 None:intergenic 30.0%
TACTAGCAAAAGAAATTGTG+AGG + chr7_2:82366352-82366371 Msa1082290:CDS 30.0%
! TTATCATCCTTGATTTTGGA+CGG - chr7_2:82366405-82366424 None:intergenic 30.0%
! CCTTTTATCATCCTTGATTT+TGG - chr7_2:82366409-82366428 None:intergenic 30.0%
CCAAAATCAAGGATGATAAA+AGG + chr7_2:82366406-82366425 Msa1082290:CDS 30.0%
! TCAAGGATGATAAAAGGTAT+TGG + chr7_2:82366412-82366431 Msa1082290:CDS 30.0%
ATTCGTTATATTGGCAGAAA+AGG + chr7_2:82366507-82366526 Msa1082290:CDS 30.0%
AAAAAACTAATCGTACCTTC+AGG - chr7_2:82366675-82366694 None:intergenic 30.0%
GATAGATATCCTTTCATGTT+TGG - chr7_2:82366816-82366835 None:intergenic 30.0%
TGATATCTTTCACCTTTGTA+TGG - chr7_2:82366840-82366859 None:intergenic 30.0%
! TTGAAAGAACAATTGGTGTT+TGG + chr7_2:82366943-82366962 Msa1082290:CDS 30.0%
! TCTTGTTTGATTAGTGGAAA+TGG - chr7_2:82367002-82367021 None:intergenic 30.0%
AAGATGAGGAATTCAACAAA+TGG + chr7_2:82367078-82367097 Msa1082290:CDS 30.0%
AGATGAGGAATTCAACAAAT+GGG + chr7_2:82367079-82367098 Msa1082290:CDS 30.0%
GTTTCTTTCTTCTTCTTGTT+CGG - chr7_2:82367126-82367145 None:intergenic 30.0%
AATCGCTTCTTCTATTACGA+CGG - chr7_2:82361098-82361117 None:intergenic 35.0%
GAATTTGGGAATTAGGGTTT+GGG - chr7_2:82361156-82361175 None:intergenic 35.0%
AGAATTTGGGAATTAGGGTT+TGG - chr7_2:82361157-82361176 None:intergenic 35.0%
ACAGAGAAGGAACAACAATT+TGG - chr7_2:82361252-82361271 None:intergenic 35.0%
ACAGAAAAATTACACGGCAA+TGG - chr7_2:82361297-82361316 None:intergenic 35.0%
!! GATATACTTCAAGTGTCGAA+AGG + chr7_2:82361403-82361422 Msa1082290:five_prime_UTR 35.0%
GTATCATCCTGATAAGAATC+CGG + chr7_2:82361474-82361493 Msa1082290:five_prime_UTR 35.0%
TATCATCCTGATAAGAATCC+GGG + chr7_2:82361475-82361494 Msa1082290:five_prime_UTR 35.0%
AAATTTGCGGAGATTAGCAA+TGG + chr7_2:82361517-82361536 Msa1082290:five_prime_UTR 35.0%
TTCATAAGCTATATTAGGGG+GGG + chr7_2:82361761-82361780 Msa1082290:intron 35.0%
AACTAATCAAGCAAAGGCTA+AGG - chr7_2:82362094-82362113 None:intergenic 35.0%
AGCAGTTATAGAAGGCTATT+AGG + chr7_2:82362242-82362261 Msa1082290:intron 35.0%
GCAGTTATAGAAGGCTATTA+GGG + chr7_2:82362243-82362262 Msa1082290:intron 35.0%
ATTATGTTGTCATGTGTACG+TGG + chr7_2:82362393-82362412 Msa1082290:intron 35.0%
TGCTATGTTCTTGATGTGTA+TGG + chr7_2:82362418-82362437 Msa1082290:intron 35.0%
GCTATGTTCTTGATGTGTAT+GGG + chr7_2:82362419-82362438 Msa1082290:intron 35.0%
CTATGTTCTTGATGTGTATG+GGG + chr7_2:82362420-82362439 Msa1082290:intron 35.0%
!!! TAATTTTTAGTATGGGGCTC+TGG + chr7_2:82362459-82362478 Msa1082290:intron 35.0%
GTTTCTTTCAGTTTCTTTGG+CGG + chr7_2:82362515-82362534 Msa1082290:intron 35.0%
TTTCTTTCAGTTTCTTTGGC+GGG + chr7_2:82362516-82362535 Msa1082290:intron 35.0%
GAAGAAGAGAAAATTGCGAA+AGG + chr7_2:82362554-82362573 Msa1082290:five_prime_UTR 35.0%
CACCCATATACAAATCTTCA+AGG - chr7_2:82362610-82362629 None:intergenic 35.0%
CTTGAAGATTTGTATATGGG+TGG + chr7_2:82362608-82362627 Msa1082290:five_prime_UTR 35.0%
GACACATATATGTTACCCAT+TGG - chr7_2:82362711-82362730 None:intergenic 35.0%
! CAGTTCTTCTTAGTTGCTTT+AGG - chr7_2:82362939-82362958 None:intergenic 35.0%
CAACTAAGAAGAACTGCTTT+AGG + chr7_2:82362943-82362962 Msa1082290:intron 35.0%
ACTAAGAAGAACTGCTTTAG+GGG + chr7_2:82362945-82362964 Msa1082290:intron 35.0%
GGAAATAAAGAATAGCCTCT+GGG - chr7_2:82363010-82363029 None:intergenic 35.0%
TGGTGTAGTTGTAAACTAAG+TGG + chr7_2:82363135-82363154 Msa1082290:intron 35.0%
ACTTGCGAATTCTACACTTT+GGG - chr7_2:82363215-82363234 None:intergenic 35.0%
GTAGAAATGAGGTTTATCAC+AGG + chr7_2:82363335-82363354 Msa1082290:five_prime_UTR 35.0%
! GTCATTTGTTGAAACATTCC+AGG - chr7_2:82363370-82363389 None:intergenic 35.0%
GCACATAAGGAAAAAAGACA+AGG - chr7_2:82363587-82363606 None:intergenic 35.0%
!!! CTTTTTTCCTTATGTGCTTG+AGG + chr7_2:82363590-82363609 Msa1082290:intron 35.0%
! TTTTTCCTTATGTGCTTGAG+GGG + chr7_2:82363592-82363611 Msa1082290:intron 35.0%
GTGCTAATGTCAAATACGTA+AGG + chr7_2:82363712-82363731 Msa1082290:five_prime_UTR 35.0%
TAATGTCAAATACGTAAGGG+AGG + chr7_2:82363716-82363735 Msa1082290:five_prime_UTR 35.0%
AATGTCAAATACGTAAGGGA+GGG + chr7_2:82363717-82363736 Msa1082290:five_prime_UTR 35.0%
GTCACTGTTGATATTGAGAA+AGG + chr7_2:82363747-82363766 Msa1082290:five_prime_UTR 35.0%
! ATTGAGAAAGGCATGAAAGA+TGG + chr7_2:82363759-82363778 Msa1082290:five_prime_UTR 35.0%
GTGTAGGGCTTATAAGAAAA+TGG - chr7_2:82363859-82363878 None:intergenic 35.0%
CCTTAAAAGCTAGCTATCAA+AGG - chr7_2:82364232-82364251 None:intergenic 35.0%
!!! CCTTTGATAGCTAGCTTTTA+AGG + chr7_2:82364229-82364248 Msa1082290:five_prime_UTR 35.0%
!! CTTAAGAGAAGTGCTATGAT+AGG + chr7_2:82364396-82364415 Msa1082290:five_prime_UTR 35.0%
ATGATAGGGACTTGCATATT+AGG + chr7_2:82364411-82364430 Msa1082290:five_prime_UTR 35.0%
TGATAGGGACTTGCATATTA+GGG + chr7_2:82364412-82364431 Msa1082290:five_prime_UTR 35.0%
CGTACAATAAACCAAATGGT+GGG - chr7_2:82364486-82364505 None:intergenic 35.0%
TCTTGTGTAAAAAGAGGGTA+AGG - chr7_2:82364512-82364531 None:intergenic 35.0%
! TTACCCTCTTTTTACACAAG+AGG + chr7_2:82364511-82364530 Msa1082290:five_prime_UTR 35.0%
TTTCCAGGACTTGCATATTA+TGG + chr7_2:82364557-82364576 Msa1082290:five_prime_UTR 35.0%
AGCTATGCATATGGTCATTT+GGG - chr7_2:82364734-82364753 None:intergenic 35.0%
TCAGTGGTTCTTACTACTTT+AGG + chr7_2:82364753-82364772 Msa1082290:five_prime_UTR 35.0%
CAGTGGTTCTTACTACTTTA+GGG + chr7_2:82364754-82364773 Msa1082290:five_prime_UTR 35.0%
!! TTACTACTTTAGGGTCTGTT+TGG + chr7_2:82364763-82364782 Msa1082290:five_prime_UTR 35.0%
!! TACTACTTTAGGGTCTGTTT+GGG + chr7_2:82364764-82364783 Msa1082290:five_prime_UTR 35.0%
TACAAAATCCCCCTAATTTG+GGG + chr7_2:82364874-82364893 Msa1082290:five_prime_UTR 35.0%
! TTTGAGTTTCCCCAAATTAG+GGG - chr7_2:82364886-82364905 None:intergenic 35.0%
AAAGGCTCTATTTGGGAATT+TGG - chr7_2:82365063-82365082 None:intergenic 35.0%
TCAAGCTAAAGGCTCTATTT+GGG - chr7_2:82365070-82365089 None:intergenic 35.0%
TCTTAGAAGTAGAAGAGAAG+TGG - chr7_2:82365154-82365173 None:intergenic 35.0%
! CTTCTACTTCTAAGAAGAAG+TGG + chr7_2:82365159-82365178 Msa1082290:five_prime_UTR 35.0%
! TCTACTTCTAAGAAGAAGTG+GGG + chr7_2:82365161-82365180 Msa1082290:five_prime_UTR 35.0%
!!! GGAACTTTAGGACTACTTTT+CGG + chr7_2:82365280-82365299 Msa1082290:five_prime_UTR 35.0%
ATGAATATATATGGCCTGTG+CGG - chr7_2:82365336-82365355 None:intergenic 35.0%
! TTTTGGCGGTTTCTTGAAAA+GGG - chr7_2:82365400-82365419 None:intergenic 35.0%
!! TAGGTTTTATGCAGTTTTGG+CGG - chr7_2:82365414-82365433 None:intergenic 35.0%
!! GACTAGGTTTTATGCAGTTT+TGG - chr7_2:82365417-82365436 None:intergenic 35.0%
TAAAAATGTACCTGCACCAA+TGG - chr7_2:82365499-82365518 None:intergenic 35.0%
AAGGAAAGGTAAGCAACAAA+AGG - chr7_2:82365565-82365584 None:intergenic 35.0%
TTCAAAACACATTGCAGCTA+TGG + chr7_2:82365875-82365894 Msa1082290:intron 35.0%
! TTTATTCTCATGGATGGACT+TGG + chr7_2:82366070-82366089 Msa1082290:CDS 35.0%
! TTATTCTCATGGATGGACTT+GGG + chr7_2:82366071-82366090 Msa1082290:CDS 35.0%
AGTTATTAGTGAGTAAGGGA+TGG + chr7_2:82366172-82366191 Msa1082290:CDS 35.0%
AAATGAAATGACATCCTTGG+AGG + chr7_2:82366206-82366225 Msa1082290:CDS 35.0%
!! AGGCACTTGTTATGTTTCTT+TGG + chr7_2:82366226-82366245 Msa1082290:CDS 35.0%
TCTGTGAAGTTAAAATCAGG+AGG - chr7_2:82366378-82366397 None:intergenic 35.0%
AGAAATTCCGTCCAAAATCA+AGG + chr7_2:82366395-82366414 Msa1082290:CDS 35.0%
!!! AGGTATTGGCCTTATTTTGA+AGG + chr7_2:82366426-82366445 Msa1082290:CDS 35.0%
!!! CCTTATTTTGAAGGATGCAT+CGG + chr7_2:82366435-82366454 Msa1082290:CDS 35.0%
TTGATCTTTAGTGGGAACAA+TGG - chr7_2:82366487-82366506 None:intergenic 35.0%
! ACTAACATGACATTTTGCGT+TGG - chr7_2:82366537-82366556 None:intergenic 35.0%
!!! TCACTTTTGTTGTTGTTGGT+TGG + chr7_2:82366577-82366596 Msa1082290:CDS 35.0%
! AAGTATTACTTGGTTGATGC+AGG + chr7_2:82366786-82366805 Msa1082290:intron 35.0%
GGATATCTATCACCATACAA+AGG + chr7_2:82366825-82366844 Msa1082290:CDS 35.0%
!! CACATTCCTGATTTTAGAGA+TGG + chr7_2:82366858-82366877 Msa1082290:CDS 35.0%
!! TGACTTCCATCTCTAAAATC+AGG - chr7_2:82366867-82366886 None:intergenic 35.0%
! CAATTGGTGTTTGGAAGAAA+AGG + chr7_2:82366952-82366971 Msa1082290:CDS 35.0%
!! TTTGTTTTCCAACAGCTTAG+TGG - chr7_2:82367225-82367244 None:intergenic 35.0%
AAATCCCTGAGATTGCGTTT+CGG + chr7_2:82361193-82361212 Msa1082290:five_prime_UTR 40.0%
TTGATGCGCCATTGAAGATT+CGG - chr7_2:82361225-82361244 None:intergenic 40.0%
AATAGCATAGAGCACAGAGA+AGG - chr7_2:82361265-82361284 None:intergenic 40.0%
TCATTTCCCGGATTCTTATC+AGG - chr7_2:82361484-82361503 None:intergenic 40.0%
AGACTGCTTGAAAGAGCTTA+TGG - chr7_2:82361835-82361854 None:intergenic 40.0%
!! GTCAGCATATGAGGTATTGT+CGG + chr7_2:82361948-82361967 Msa1082290:intron 40.0%
CTGTAATCGGAACCTTCATA+TGG + chr7_2:82362285-82362304 Msa1082290:intron 40.0%
TTCTTTCAGTTTCTTTGGCG+GGG + chr7_2:82362517-82362536 Msa1082290:intron 40.0%
! CGACGACGTTATTGTTGATT+TGG + chr7_2:82362577-82362596 Msa1082290:five_prime_UTR 40.0%
TAGATTCGAGACCATCATAC+TGG + chr7_2:82362810-82362829 Msa1082290:intron 40.0%
TCACGTGAAAACCAGTATGA+TGG - chr7_2:82362824-82362843 None:intergenic 40.0%
GGGAAATAAAGAATAGCCTC+TGG - chr7_2:82363011-82363030 None:intergenic 40.0%
GACTTGCGAATTCTACACTT+TGG - chr7_2:82363216-82363235 None:intergenic 40.0%
ACGCTGTAACTGTAGAAATG+AGG + chr7_2:82363324-82363343 Msa1082290:five_prime_UTR 40.0%
GAGGTTTATCACAGGCAAAT+CGG + chr7_2:82363343-82363362 Msa1082290:five_prime_UTR 40.0%
AGGTTTATCACAGGCAAATC+GGG + chr7_2:82363344-82363363 Msa1082290:five_prime_UTR 40.0%
GTTTCAACAAATGACAGAGC+AGG + chr7_2:82363375-82363394 Msa1082290:five_prime_UTR 40.0%
GCAGGTAAATATCATCTTCG+AGG + chr7_2:82363393-82363412 Msa1082290:intron 40.0%
! ATTTTGCCCTGCAAATACAC+TGG + chr7_2:82363469-82363488 Msa1082290:intron 40.0%
TAGAAGCCAGTGTATTTGCA+GGG - chr7_2:82363478-82363497 None:intergenic 40.0%
TATTTACCCTGATAGGGACT+TGG + chr7_2:82364143-82364162 Msa1082290:five_prime_UTR 40.0%
TAATAGCCAAGTCCCTATCA+GGG - chr7_2:82364152-82364171 None:intergenic 40.0%
ATGCGATGCTCTAATTAGCT+TGG + chr7_2:82364200-82364219 Msa1082290:five_prime_UTR 40.0%
TCATAAGCACTCAAGCACTT+GGG - chr7_2:82364269-82364288 None:intergenic 40.0%
TTCATAAGCACTCAAGCACT+TGG - chr7_2:82364270-82364289 None:intergenic 40.0%
GTGCTTGAGTGCTTATGAAA+TGG + chr7_2:82364271-82364290 Msa1082290:five_prime_UTR 40.0%
AGTGCTTATGAAATGGTACC+TGG + chr7_2:82364278-82364297 Msa1082290:five_prime_UTR 40.0%
GTGCTTATGAAATGGTACCT+GGG + chr7_2:82364279-82364298 Msa1082290:five_prime_UTR 40.0%
ATATGGAAGAGACACCAGAA+AGG + chr7_2:82364330-82364349 Msa1082290:five_prime_UTR 40.0%
TTAAGTGCCAAACGACTCAA+TGG - chr7_2:82364381-82364400 None:intergenic 40.0%
GCGTACAATAAACCAAATGG+TGG - chr7_2:82364487-82364506 None:intergenic 40.0%
GCTGCGTACAATAAACCAAA+TGG - chr7_2:82364490-82364509 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAAGA+GGG - chr7_2:82364517-82364536 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAG+AGG - chr7_2:82364518-82364537 None:intergenic 40.0%
ATATGCAAGTCCTGGAAACA+GGG - chr7_2:82364555-82364574 None:intergenic 40.0%
AATATGCAAGTCCTGGAAAC+AGG - chr7_2:82364556-82364575 None:intergenic 40.0%
ACTCCATAATATGCAAGTCC+TGG - chr7_2:82364563-82364582 None:intergenic 40.0%
!! GTTTTAGTCCTTAAGTGGCT+TGG + chr7_2:82364649-82364668 Msa1082290:five_prime_UTR 40.0%
GAGCTATGCATATGGTCATT+TGG - chr7_2:82364735-82364754 None:intergenic 40.0%
!! ACTACTTTAGGGTCTGTTTG+GGG + chr7_2:82364765-82364784 Msa1082290:five_prime_UTR 40.0%
TTGAGTTTCCCCAAATTAGG+GGG - chr7_2:82364885-82364904 None:intergenic 40.0%
ATTTGGGAATTTGGAGGGAA+GGG - chr7_2:82365054-82365073 None:intergenic 40.0%
TATTTGGGAATTTGGAGGGA+AGG - chr7_2:82365055-82365074 None:intergenic 40.0%
GCTCTATTTGGGAATTTGGA+GGG - chr7_2:82365059-82365078 None:intergenic 40.0%
CTCAAGCTAAAGGCTCTATT+TGG - chr7_2:82365071-82365090 None:intergenic 40.0%
! TCTCTGACTAAGAGCATGTT+TGG + chr7_2:82365115-82365134 Msa1082290:five_prime_UTR 40.0%
!!! ACTTTAGGACTACTTTTCGG+AGG + chr7_2:82365283-82365302 Msa1082290:five_prime_UTR 40.0%
TGAATATATATGGCCTGTGC+GGG - chr7_2:82365335-82365354 None:intergenic 40.0%
AAAAGGGAAAAAGAATCGGC+GGG - chr7_2:82365384-82365403 None:intergenic 40.0%
GAAAAGGGAAAAAGAATCGG+CGG - chr7_2:82365385-82365404 None:intergenic 40.0%
!! GTTTTGGCGGTTTCTTGAAA+AGG - chr7_2:82365401-82365420 None:intergenic 40.0%
!! TGTGGCAGAAAGCATTGAAA+TGG - chr7_2:82365453-82365472 None:intergenic 40.0%
AAACATAACAAGTGCCTCCA+AGG - chr7_2:82366223-82366242 None:intergenic 40.0%
CCGATGCATCCTTCAAAATA+AGG - chr7_2:82366438-82366457 None:intergenic 40.0%
AAACTAATCGTACCTTCAGG+AGG - chr7_2:82366672-82366691 None:intergenic 40.0%
GCAGGATATCCAAACATGAA+AGG + chr7_2:82366804-82366823 Msa1082290:intron 40.0%
! TTGGTGTTTGGAAGAAAAGG+TGG + chr7_2:82366955-82366974 Msa1082290:CDS 40.0%
AATATGTGGCGTTCAAGATG+AGG + chr7_2:82367064-82367083 Msa1082290:CDS 40.0%
! AACAAATGGGAGCATATCAC+TGG + chr7_2:82367092-82367111 Msa1082290:CDS 40.0%
ACTCCATAGTCAAGTCTTCG+CGG + chr7_2:82361038-82361057 Msa1082290:five_prime_UTR 45.0%
TTTCCGCGAAGACTTGACTA+TGG - chr7_2:82361044-82361063 None:intergenic 45.0%
! ACGGAAGCTTTTACAGTGAC+AGG - chr7_2:82361079-82361098 None:intergenic 45.0%
CTCAGGGATTTCGATGTGAT+TGG - chr7_2:82361184-82361203 None:intergenic 45.0%
GGAGAGATCCGAATCTTCAA+TGG + chr7_2:82361214-82361233 Msa1082290:five_prime_UTR 45.0%
!! TCAAGTGTCGAAAGGTGCAT+CGG + chr7_2:82361411-82361430 Msa1082290:five_prime_UTR 45.0%
AGCTATATTAGGGGGGGTTA+TGG + chr7_2:82361767-82361786 Msa1082290:intron 45.0%
TCTTTCAGTTTCTTTGGCGG+GGG + chr7_2:82362518-82362537 Msa1082290:intron 45.0%
GTATATGGGTGGTTCCTTGA+AGG + chr7_2:82362619-82362638 Msa1082290:five_prime_UTR 45.0%
TAAATGTGACCGCACCTTCA+AGG - chr7_2:82362636-82362655 None:intergenic 45.0%
CTGACATCATGTATTCCCAG+AGG + chr7_2:82362992-82363011 Msa1082290:intron 45.0%
AATGTTGTAAAGCCAGCTCC+TGG + chr7_2:82363295-82363314 Msa1082290:five_prime_UTR 45.0%
! CAGTTACAGCGTCTTTTTCC+AGG - chr7_2:82363316-82363335 None:intergenic 45.0%
CTAGAAGCCAGTGTATTTGC+AGG - chr7_2:82363479-82363498 None:intergenic 45.0%
TGTGTGATATCTACCTGTCC+AGG + chr7_2:82363677-82363696 Msa1082290:intron 45.0%
TAGCACATTGATCACAGACC+TGG - chr7_2:82363698-82363717 None:intergenic 45.0%
GTAATAGCCAAGTCCCTATC+AGG - chr7_2:82364153-82364172 None:intergenic 45.0%
GATAGGGACTTGGCTATTAC+TGG + chr7_2:82364153-82364172 Msa1082290:five_prime_UTR 45.0%
AAAGCTAGCTATCAAAGGGG+AGG - chr7_2:82364227-82364246 None:intergenic 45.0%
TTATGAAATGGTACCTGGGC+AGG + chr7_2:82364283-82364302 Msa1082290:five_prime_UTR 45.0%
AGTGCATCCATTGAGTCGTT+TGG + chr7_2:82364371-82364390 Msa1082290:five_prime_UTR 45.0%
ACTTGCATATTAGGGCAACC+CGG + chr7_2:82364420-82364439 Msa1082290:five_prime_UTR 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr7_2:82364522-82364541 Msa1082290:five_prime_UTR 45.0%
GGGAAAAACCAAGCCACTTA+AGG - chr7_2:82364660-82364679 None:intergenic 45.0%
!!! AAGTGGCTTGGTTTTTCCCA+TGG + chr7_2:82364661-82364680 Msa1082290:five_prime_UTR 45.0%
!!! TCCCATGGCAGCTAGTTTTA+CGG + chr7_2:82364676-82364695 Msa1082290:five_prime_UTR 45.0%
TGACCATATGCATAGCTCAG+TGG + chr7_2:82364737-82364756 Msa1082290:five_prime_UTR 45.0%
GAACCACTGAGCTATGCATA+TGG - chr7_2:82364743-82364762 None:intergenic 45.0%
!! CTACTTTAGGGTCTGTTTGG+GGG + chr7_2:82364766-82364785 Msa1082290:five_prime_UTR 45.0%
! TCTGTTTGGGGGTTTAGGAT+GGG + chr7_2:82364777-82364796 Msa1082290:five_prime_UTR 45.0%
!!! AAGGAATGGAGGGTTTTAGG+AGG + chr7_2:82364819-82364838 Msa1082290:five_prime_UTR 45.0%
!!! AATGGAGGGTTTTAGGAGGA+AGG + chr7_2:82364823-82364842 Msa1082290:five_prime_UTR 45.0%
!!! ATGGAGGGTTTTAGGAGGAA+GGG + chr7_2:82364824-82364843 Msa1082290:five_prime_UTR 45.0%
!!! GTTTTAGGAGGAAGGGCTTT+GGG + chr7_2:82364831-82364850 Msa1082290:five_prime_UTR 45.0%
!! TTTTAGGAGGAAGGGCTTTG+GGG + chr7_2:82364832-82364851 Msa1082290:five_prime_UTR 45.0%
TTTGGGAATTTGGAGGGAAG+GGG - chr7_2:82365053-82365072 None:intergenic 45.0%
GGCTCTATTTGGGAATTTGG+AGG - chr7_2:82365060-82365079 None:intergenic 45.0%
CGAGAAACTCTTAACACTCC+AGG + chr7_2:82366096-82366115 Msa1082290:CDS 45.0%
AATCAGGAGAGACCGTAAGT+AGG + chr7_2:82366298-82366317 Msa1082290:CDS 45.0%
TCTTTAGTGGGAACAATGGC+AGG - chr7_2:82366483-82366502 None:intergenic 45.0%
!! TTTGTTGTTGTTGGTTGGCC+TGG + chr7_2:82366582-82366601 Msa1082290:CDS 45.0%
AGAGATGGAAGTCAAGCACA+AGG + chr7_2:82366873-82366892 Msa1082290:CDS 45.0%
AGTACAAGATGGGAGCTACA+TGG + chr7_2:82367178-82367197 Msa1082290:CDS 45.0%
TCGAATAGCCACTAAGCTGT+TGG + chr7_2:82367214-82367233 Msa1082290:CDS 45.0%
!! AAATAAATATTATAATTGTT+GGG - chr7_2:82364128-82364147 None:intergenic 5.0%
!! TAAATAAATATTATAATTGT+TGG - chr7_2:82364129-82364148 None:intergenic 5.0%
!! ATAAAAAATATGAATATATA+TGG - chr7_2:82365345-82365364 None:intergenic 5.0%
!!! TCATATTTTTTATTATTTTT+TGG + chr7_2:82365352-82365371 Msa1082290:five_prime_UTR 5.0%
!!! TTTATTTTATAAATATTTCT+AGG + chr7_2:82366762-82366781 Msa1082290:intron 5.0%
TATGGAGTCGACACTACGCT+AGG - chr7_2:82361026-82361045 None:intergenic 50.0%
! AGCTTTTACAGTGACAGGCG+TGG - chr7_2:82361074-82361093 None:intergenic 50.0%
CTCTCCGAAACGCAATCTCA+GGG - chr7_2:82361200-82361219 None:intergenic 50.0%
TCTCTCCGAAACGCAATCTC+AGG - chr7_2:82361201-82361220 None:intergenic 50.0%
GTTGCTGCTGTCAGCATATG+AGG + chr7_2:82361939-82361958 Msa1082290:intron 50.0%
!! AGGTGGTGGAATGAACATGC+AGG + chr7_2:82362044-82362063 Msa1082290:five_prime_UTR 50.0%
TCTTGATGTGTATGGGGCTC+TGG + chr7_2:82362426-82362445 Msa1082290:intron 50.0%
!!! GGGCTCTGGACTTGCTTTTA+TGG + chr7_2:82362473-82362492 Msa1082290:intron 50.0%
TTTCTTTGGCGGGGGATCAA+TGG + chr7_2:82362526-82362545 Msa1082290:five_prime_UTR 50.0%
!!! ACTGGTTTTCACGTGACACG+CGG + chr7_2:82362828-82362847 Msa1082290:intron 50.0%
CTTATGTGCTTGAGGGGACT+GGG + chr7_2:82363598-82363617 Msa1082290:intron 50.0%
TTATGTGCTTGAGGGGACTG+GGG + chr7_2:82363599-82363618 Msa1082290:intron 50.0%
CATTGATCACAGACCTGGAC+AGG - chr7_2:82363693-82363712 None:intergenic 50.0%
! GAAAGGCATGAAAGATGGCC+AGG + chr7_2:82363764-82363783 Msa1082290:five_prime_UTR 50.0%
CACTCAAGCACTTGGGAGTT+GGG - chr7_2:82364262-82364281 None:intergenic 50.0%
ATTGAAGCTCCCGCATATGC+AGG + chr7_2:82364446-82364465 Msa1082290:five_prime_UTR 50.0%
TTGAAGCTCCCGCATATGCA+GGG + chr7_2:82364447-82364466 Msa1082290:five_prime_UTR 50.0%
TGGAAACAGGGTTCAAGTCC+TGG - chr7_2:82364543-82364562 None:intergenic 50.0%
AGGACTTGAACCCTGTTTCC+AGG + chr7_2:82364542-82364561 Msa1082290:five_prime_UTR 50.0%
CCCGTAAAACTAGCTGCCAT+GGG - chr7_2:82364680-82364699 None:intergenic 50.0%
!!! CCCATGGCAGCTAGTTTTAC+GGG + chr7_2:82364677-82364696 Msa1082290:five_prime_UTR 50.0%
TCCCGTAAAACTAGCTGCCA+TGG - chr7_2:82364681-82364700 None:intergenic 50.0%
!!! ATGGCAGCTAGTTTTACGGG+AGG + chr7_2:82364680-82364699 Msa1082290:five_prime_UTR 50.0%
!!! TGGCAGCTAGTTTTACGGGA+GGG + chr7_2:82364681-82364700 Msa1082290:five_prime_UTR 50.0%
ATTCAGCACCCCAAGCATGT+GGG - chr7_2:82364709-82364728 None:intergenic 50.0%
AATTCAGCACCCCAAGCATG+TGG - chr7_2:82364710-82364729 None:intergenic 50.0%
TAGGGTCTGTTTGGGGGTTT+AGG + chr7_2:82364772-82364791 Msa1082290:five_prime_UTR 50.0%
GTCTGTTTGGGGGTTTAGGA+TGG + chr7_2:82364776-82364795 Msa1082290:five_prime_UTR 50.0%
! TTTGGGGGTTTAGGATGGGA+GGG + chr7_2:82364781-82364800 Msa1082290:five_prime_UTR 50.0%
AGGACGTTAAGCGGAAGGAA+TGG + chr7_2:82364805-82364824 Msa1082290:five_prime_UTR 50.0%
ACGTTAAGCGGAAGGAATGG+AGG + chr7_2:82364808-82364827 Msa1082290:five_prime_UTR 50.0%
CGTTAAGCGGAAGGAATGGA+GGG + chr7_2:82364809-82364828 Msa1082290:five_prime_UTR 50.0%
! CGGAAGGAATGGAGGGTTTT+AGG + chr7_2:82364816-82364835 Msa1082290:five_prime_UTR 50.0%
!!! GGTTTTAGGAGGAAGGGCTT+TGG + chr7_2:82364830-82364849 Msa1082290:five_prime_UTR 50.0%
!! GGATGCATCGGTGCTATAGA+TGG + chr7_2:82366447-82366466 Msa1082290:CDS 50.0%
TCGTACCTTCAGGAGGATGA+GGG - chr7_2:82366665-82366684 None:intergenic 50.0%
ATCGTACCTTCAGGAGGATG+AGG - chr7_2:82366666-82366685 None:intergenic 50.0%
TGGGTGGTTCCTTGAAGGTG+CGG + chr7_2:82362624-82362643 Msa1082290:intron 55.0%
! CAGCGTCTTTTTCCAGGAGC+TGG - chr7_2:82363310-82363329 None:intergenic 55.0%
TATCACAGGCAAATCGGGCC+TGG + chr7_2:82363349-82363368 Msa1082290:five_prime_UTR 55.0%
CCAGTCCCCTCAAGCACATA+AGG - chr7_2:82363600-82363619 None:intergenic 55.0%
CCTTATGTGCTTGAGGGGAC+TGG + chr7_2:82363597-82363616 Msa1082290:intron 55.0%
GCACTCAAGCACTTGGGAGT+TGG - chr7_2:82364263-82364282 None:intergenic 55.0%
ATGGTACCTGGGCAGGTTTC+TGG + chr7_2:82364290-82364309 Msa1082290:five_prime_UTR 55.0%
AAGACACCAGAAACCTGCCC+AGG - chr7_2:82364299-82364318 None:intergenic 55.0%
AACGCTCGACTCAGCCTTTC+TGG - chr7_2:82364347-82364366 None:intergenic 55.0%
ATGCGGGAGCTTCAATGCAC+CGG - chr7_2:82364442-82364461 None:intergenic 55.0%
! GTTTGGGGGTTTAGGATGGG+AGG + chr7_2:82364780-82364799 Msa1082290:five_prime_UTR 55.0%
! TTGGGGGTTTAGGATGGGAG+GGG + chr7_2:82364782-82364801 Msa1082290:five_prime_UTR 55.0%
GGAATTTGGAGGGAAGGGGA+GGG - chr7_2:82365049-82365068 None:intergenic 55.0%
TGCACATTCGATTCCCGCAC+AGG + chr7_2:82365319-82365338 Msa1082290:five_prime_UTR 55.0%
GTACCTGCACCAATGGTCAG+CGG - chr7_2:82365492-82365511 None:intergenic 55.0%
GTGTTCCCTCATCCTCCTGA+AGG + chr7_2:82366657-82366676 Msa1082290:CDS 55.0%
! GGTTTGAAGCAGCATGCCGC+TGG + chr7_2:82362012-82362031 Msa1082290:five_prime_UTR 60.0%
TTGAAGCAGCATGCCGCTGG+TGG + chr7_2:82362015-82362034 Msa1082290:five_prime_UTR 60.0%
ACCACCTCTTCCTCCACCAG+CGG - chr7_2:82362031-82362050 None:intergenic 60.0%
CTTTGGCGGGGGATCAATGG+AGG + chr7_2:82362529-82362548 Msa1082290:five_prime_UTR 60.0%
TTGAGGGGACTGGGGTGTGA+AGG + chr7_2:82363607-82363626 Msa1082290:intron 60.0%
TGCGGGAGCTTCAATGCACC+GGG - chr7_2:82364441-82364460 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr7_2:82364458-82364477 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr7_2:82364459-82364478 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr7_2:82364458-82364477 Msa1082290:five_prime_UTR 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr7_2:82364459-82364478 Msa1082290:five_prime_UTR 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr7_2:82364474-82364493 None:intergenic 60.0%
GGGAGGGTTCCCACATGCTT+GGG + chr7_2:82364697-82364716 Msa1082290:five_prime_UTR 60.0%
GGAGGGTTCCCACATGCTTG+GGG + chr7_2:82364698-82364717 Msa1082290:five_prime_UTR 60.0%
TGGGAGGGGAGGACGTTAAG+CGG + chr7_2:82364796-82364815 Msa1082290:five_prime_UTR 60.0%
AGGGGAGGACGTTAAGCGGA+AGG + chr7_2:82364800-82364819 Msa1082290:five_prime_UTR 60.0%
GGGAATTTGGAGGGAAGGGG+AGG - chr7_2:82365050-82365069 None:intergenic 60.0%
GGCGGCAGCAAGCATATGTG+TGG - chr7_2:82365471-82365490 None:intergenic 60.0%
CGTGTGTCATGCGCAGTACC+AGG - chr7_2:82366603-82366622 None:intergenic 60.0%
AAGCAGCATGCCGCTGGTGG+AGG + chr7_2:82362018-82362037 Msa1082290:five_prime_UTR 65.0%
CATGCCGCTGGTGGAGGAAG+AGG + chr7_2:82362024-82362043 Msa1082290:five_prime_UTR 65.0%
GCTGGTGGAGGAAGAGGTGG+TGG + chr7_2:82362030-82362049 Msa1082290:five_prime_UTR 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr7_2:82364452-82364471 Msa1082290:five_prime_UTR 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr7_2:82364453-82364472 Msa1082290:five_prime_UTR 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr7_2:82364457-82364476 Msa1082290:five_prime_UTR 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr7_2:82364472-82364491 Msa1082290:five_prime_UTR 65.0%
CGGGAGGGTTCCCACATGCT+TGG + chr7_2:82364696-82364715 Msa1082290:five_prime_UTR 65.0%
! GGGGTTTAGGATGGGAGGGG+AGG + chr7_2:82364785-82364804 Msa1082290:five_prime_UTR 65.0%
!! AGGGGAGGGCTTTGGGGGAT+TGG - chr7_2:82365035-82365054 None:intergenic 65.0%
! AGGGAAGGGGAGGGCTTTGG+GGG - chr7_2:82365040-82365059 None:intergenic 65.0%
GAGGGAAGGGGAGGGCTTTG+GGG - chr7_2:82365041-82365060 None:intergenic 65.0%
GGAGGGAAGGGGAGGGCTTT+GGG - chr7_2:82365042-82365061 None:intergenic 65.0%
TGGAGGGAAGGGGAGGGCTT+TGG - chr7_2:82365043-82365062 None:intergenic 65.0%
TTGCTGCCGCCGCTGACCAT+TGG + chr7_2:82365480-82365499 Msa1082290:five_prime_UTR 65.0%
CCTGCACCAATGGTCAGCGG+CGG - chr7_2:82365489-82365508 None:intergenic 65.0%
GCCGCTGGTGGAGGAAGAGG+TGG + chr7_2:82362027-82362046 Msa1082290:five_prime_UTR 70.0%
CCGCCGCTGACCATTGGTGC+AGG + chr7_2:82365486-82365505 Msa1082290:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 82360977 82367262 82360977 ID=Msa1082290;Name=Msa1082290
chr7_2 mRNA 82360977 82367262 82360977 ID=Msa1082290-mRNA-1;Parent=Msa1082290;Name=Msa1082290-mRNA-1;_AED=0.16;_eAED=0.16;_QI=2644|0.85|0.87|1|0.85|0.87|8|0|400
chr7_2 exon 82360977 82361303 82360977 ID=Msa1082290-mRNA-1:exon:21296;Parent=Msa1082290-mRNA-1
chr7_2 exon 82361390 82361538 82361390 ID=Msa1082290-mRNA-1:exon:21297;Parent=Msa1082290-mRNA-1
chr7_2 exon 82361953 82362079 82361953 ID=Msa1082290-mRNA-1:exon:21298;Parent=Msa1082290-mRNA-1
chr7_2 exon 82362526 82362640 82362526 ID=Msa1082290-mRNA-1:exon:21299;Parent=Msa1082290-mRNA-1
chr7_2 exon 82363280 82363396 82363280 ID=Msa1082290-mRNA-1:exon:21300;Parent=Msa1082290-mRNA-1
chr7_2 exon 82363699 82365507 82363699 ID=Msa1082290-mRNA-1:exon:21301;Parent=Msa1082290-mRNA-1
chr7_2 exon 82365931 82366678 82365931 ID=Msa1082290-mRNA-1:exon:21302;Parent=Msa1082290-mRNA-1
chr7_2 exon 82366808 82367262 82366808 ID=Msa1082290-mRNA-1:exon:21303;Parent=Msa1082290-mRNA-1
chr7_2 five_prime_UTR 82360977 82361303 82360977 ID=Msa1082290-mRNA-1:five_prime_utr;Parent=Msa1082290-mRNA-1
chr7_2 five_prime_UTR 82361390 82361538 82361390 ID=Msa1082290-mRNA-1:five_prime_utr;Parent=Msa1082290-mRNA-1
chr7_2 five_prime_UTR 82361953 82362079 82361953 ID=Msa1082290-mRNA-1:five_prime_utr;Parent=Msa1082290-mRNA-1
chr7_2 five_prime_UTR 82362526 82362640 82362526 ID=Msa1082290-mRNA-1:five_prime_utr;Parent=Msa1082290-mRNA-1
chr7_2 five_prime_UTR 82363280 82363396 82363280 ID=Msa1082290-mRNA-1:five_prime_utr;Parent=Msa1082290-mRNA-1
chr7_2 five_prime_UTR 82363699 82365507 82363699 ID=Msa1082290-mRNA-1:five_prime_utr;Parent=Msa1082290-mRNA-1
chr7_2 CDS 82365931 82366678 82365931 ID=Msa1082290-mRNA-1:cds;Parent=Msa1082290-mRNA-1
chr7_2 CDS 82366808 82367262 82366808 ID=Msa1082290-mRNA-1:cds;Parent=Msa1082290-mRNA-1
Gene Sequence

>Msa1082290

ATGTCTTCTAATCAGATCAATGAGCATTCAAGAAAAGTTAAAAAAAGAAAATGTATGTTTTATAAAATATGTTATGGGGCAGCGATGATTGCATATGACTATCATATGAAGTACTTACTAAAGCAAGATAATAGATTTCTTTATTCTCATGGATGGACTTGGGTTCGAGAAACTCTTAACACTCCAGGTGAAAGTTATAATATGTTTAGAATGGAAACTCATGCTGTATTGAAACTTGAAAAGTTATTAGTGAGTAAGGGATGGTTACACCCATCAAATGAAATGACATCCTTGGAGGCACTTGTTATGTTTCTTTGGAGTTGTGCGCATAGCGAGACTAATAGAAATATTCAAAATAAATTTGGAAAATCAGGAGAGACCGTAAGTAGGAAGTTTAGTGAAGTTTTAGAAAGTTTATGTTTACTAGCAAAAGAAATTGTGAGGCCTCCTGATTTTAACTTCACAGAAATTCCGTCCAAAATCAAGGATGATAAAAGGTATTGGCCTTATTTTGAAGGATGCATCGGTGCTATAGATGGAACGCATATTCCTGCCATTGTTCCCACTAAAGATCAAATTCGTTATATTGGCAGAAAAGGATATCCAACGCAAAATGTCATGTTAGTCTGTAACTTAGACATGTTAATCACTTTTGTTGTTGTTGGTTGGCCTGGTACTGCGCATGACACACGTATTCTTACGTCAGTCCTTGAAGAAATGAAAAATGTGTTCCCTCATCCTCCTGAAGGATATCCAAACATGAAAGGATATCTATCACCATACAAAGGTGAAAGATATCACATTCCTGATTTTAGAGATGGAAGTCAAGCACAAGGCATTCGTGAAGTATTCAATCATGCACATTCGTCACTTAGAAATGTCATTGAAAGAACAATTGGTGTTTGGAAGAAAAGGTGGCATATTTTATGTGATATGAGACCATTTCCACTAATCAAACAAGAAAAGATCATAGTTGCAACAACAGCACTTCATAACTTTATTCGAATATGTGGCGTTCAAGATGAGGAATTCAACAAATGGGAGCATATCACTGGATATATGTCCGAACAAGAAGAAGAAAGAAACATTAATGAAGATTCAAGTTCAAATAATTTAAGAGTACAAGATGGGAGCTACATGGATAGAGCTAGAAATCGAATAGCCACTAAGCTGTTGGAAAACAAAAATCGTTCAAGTTTATGA
Protein sequence

>Msa1082290

MSSNQINEHSRKVKKRKCMFYKICYGAAMIAYDYHMKYLLKQDNRFLYSHGWTWVRETLNTPGESYNMFRMETHAVLKLEKLLVSKGWLHPSNEMTSLEALVMFLWSCAHSETNRNIQNKFGKSGETVSRKFSEVLESLCLLAKEIVRPPDFNFTEIPSKIKDDKRYWPYFEGCIGAIDGTHIPAIVPTKDQIRYIGRKGYPTQNVMLVCNLDMLITFVVVGWPGTAHDTRILTSVLEEMKNVFPHPPEGYPNMKGYLSPYKGERYHIPDFRDGSQAQGIREVFNHAHSSLRNVIERTIGVWKKRWHILCDMRPFPLIKQEKIIVATTALHNFIRICGVQDEEFNKWEHITGYMSEQEEERNINEDSSSNNLRVQDGSYMDRARNRIATKLLENKNRSSL*