Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602160 | RHN73145.1 | 94.091 | 220 | 13 | 0 | 25 | 244 | 185 | 404 | 6.57e-141 | 429 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602160 | sp|Q5NBT9|TPR1_ORYSJ | 47.845 | 232 | 88 | 6 | 33 | 236 | 228 | 454 | 5.97e-53 | 187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602160 | A0A396J9K1 | 94.091 | 220 | 13 | 0 | 25 | 244 | 185 | 404 | 3.14e-141 | 429 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0541380 | Msa0602160 | 0.842748 | 2.139495e-58 | -8.615850e-47 |
| Msa0602160 | Msa0908770 | 0.818362 | 2.039608e-52 | -8.615850e-47 |
| Msa0602160 | Msa1324440 | 0.913944 | 3.417191e-84 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602160 | MtrunA17_Chr2g0295351 | 94.091 | 220 | 13 | 0 | 25 | 244 | 185 | 404 | 6.04e-145 | 429 |
| Msa0602160 | MtrunA17_Chr2g0295281 | 74.545 | 165 | 32 | 2 | 85 | 239 | 58 | 222 | 2.88e-79 | 240 |
| Msa0602160 | MtrunA17_Chr2g0295251 | 65.217 | 161 | 54 | 1 | 84 | 244 | 52 | 210 | 2.42e-66 | 219 |
| Msa0602160 | MtrunA17_Chr4g0067791 | 47.191 | 267 | 95 | 4 | 16 | 237 | 197 | 462 | 1.24e-63 | 214 |
| Msa0602160 | MtrunA17_Chr2g0310461 | 61.935 | 155 | 42 | 2 | 90 | 244 | 67 | 204 | 5.54e-59 | 191 |
| Msa0602160 | MtrunA17_Chr1g0192431 | 42.322 | 267 | 108 | 5 | 16 | 237 | 197 | 462 | 7.92e-56 | 192 |
| Msa0602160 | MtrunA17_Chr7g0271991 | 42.537 | 268 | 105 | 6 | 16 | 236 | 197 | 462 | 1.05e-51 | 180 |
| Msa0602160 | MtrunA17_Chr4g0003011 | 49.219 | 128 | 65 | 0 | 109 | 236 | 345 | 472 | 2.31e-39 | 144 |
| Msa0602160 | MtrunA17_Chr2g0333311 | 46.923 | 130 | 69 | 0 | 107 | 236 | 343 | 472 | 7.06e-39 | 143 |
| Msa0602160 | MtrunA17_Chr4g0064101 | 45.802 | 131 | 71 | 0 | 107 | 237 | 343 | 473 | 1.14e-35 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602160 | AT5G27030.1 | 57.143 | 154 | 63 | 1 | 83 | 236 | 311 | 461 | 1.14e-49 | 174 |
| Msa0602160 | AT3G16830.1 | 41.636 | 269 | 106 | 7 | 16 | 236 | 197 | 462 | 4.77e-47 | 167 |
| Msa0602160 | AT5G27030.2 | 48.889 | 180 | 63 | 2 | 83 | 236 | 311 | 487 | 1.38e-44 | 160 |
| Msa0602160 | AT1G15750.3 | 43.478 | 161 | 85 | 2 | 82 | 236 | 311 | 471 | 1.37e-39 | 145 |
| Msa0602160 | AT1G15750.1 | 43.478 | 161 | 85 | 2 | 82 | 236 | 311 | 471 | 1.37e-39 | 145 |
| Msa0602160 | AT1G15750.2 | 43.478 | 161 | 85 | 2 | 82 | 236 | 311 | 471 | 1.37e-39 | 145 |
| Msa0602160 | AT1G15750.4 | 43.478 | 161 | 85 | 2 | 82 | 236 | 311 | 471 | 1.37e-39 | 145 |
| Msa0602160 | AT1G80490.1 | 48.462 | 130 | 67 | 0 | 107 | 236 | 341 | 470 | 1.43e-39 | 145 |
| Msa0602160 | AT1G80490.3 | 48.462 | 130 | 67 | 0 | 107 | 236 | 342 | 471 | 1.48e-39 | 145 |
| Msa0602160 | AT1G80490.2 | 48.462 | 130 | 67 | 0 | 107 | 236 | 342 | 471 | 1.48e-39 | 145 |
| Msa0602160 | AT3G15880.3 | 34.177 | 237 | 128 | 1 | 28 | 236 | 237 | 473 | 9.92e-39 | 143 |
| Msa0602160 | AT3G15880.1 | 34.177 | 237 | 128 | 1 | 28 | 236 | 237 | 473 | 1.25e-38 | 143 |
| Msa0602160 | AT3G15880.4 | 34.177 | 237 | 128 | 1 | 28 | 236 | 237 | 473 | 1.25e-38 | 143 |
| Msa0602160 | AT3G15880.2 | 34.177 | 237 | 128 | 1 | 28 | 236 | 237 | 473 | 1.28e-38 | 143 |
Find 88 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGTTCGGTCAAATTTC+AGG | 0.181186 | 4_2:+45493323 | Msa0602160:CDS |
| AGAGCATAGTTGTTCATATT+TGG | 0.190625 | 4_2:+45495468 | Msa0602160:three_prime_UTR |
| CATCAAGAGCAAAGTTGTTT+TGG | 0.224965 | 4_2:-45495612 | None:intergenic |
| TTTGAAACTTCTGTAGTTTA+GGG | 0.243309 | 4_2:+45495695 | Msa0602160:three_prime_UTR |
| TAATATATGCTAATATTTAA+TGG | 0.246631 | 4_2:+45495562 | Msa0602160:three_prime_UTR |
| AATGCTCTTGTAGGCCATTA+TGG | 0.247263 | 4_2:-45493684 | None:intergenic |
| TTACATGTGATTATGTCTTT+TGG | 0.264580 | 4_2:+45495534 | Msa0602160:three_prime_UTR |
| TATCAAAGCCTTTCAAAATA+TGG | 0.266931 | 4_2:+45493292 | Msa0602160:CDS |
| GAAACAGTTGGTAGTGAAAA+TGG | 0.267992 | 4_2:+45493228 | Msa0602160:intron |
| TGGAGATGATAAGTTAATTA+AGG | 0.291102 | 4_2:+45493875 | Msa0602160:three_prime_UTR |
| AAGGAAGGATCCATATTCTA+TGG | 0.291219 | 4_2:+45492578 | Msa0602160:CDS |
| GACATCTGCATTAATATTAA+AGG | 0.293442 | 4_2:+45492559 | Msa0602160:CDS |
| CTGAAATTTGACCGAACAAT+TGG | 0.301187 | 4_2:-45493322 | None:intergenic |
| AGGATCAACTGTAACAAATA+TGG | 0.308984 | 4_2:+45493090 | Msa0602160:CDS |
| AATTGAAATCCCATAGAATA+TGG | 0.331847 | 4_2:-45492588 | None:intergenic |
| GGTGAGGTTCCGGTGTGTTT+TGG | 0.360724 | 4_2:+45495489 | Msa0602160:three_prime_UTR |
| GTTCATATTTGGTGAGGTTC+CGG | 0.366406 | 4_2:+45495479 | Msa0602160:three_prime_UTR |
| ATAGCATGACTGCAGTTATA+AGG | 0.374810 | 4_2:+45492537 | None:intergenic |
| TCAATTCATTCTATCCTTGC+TGG | 0.376168 | 4_2:+45493124 | Msa0602160:CDS |
| ATACCTCCAAATGCTCTTGT+AGG | 0.377214 | 4_2:-45493693 | None:intergenic |
| ATTTCAATTTCACCTAGAAA+TGG | 0.389485 | 4_2:+45492602 | Msa0602160:CDS |
| ATGGAATATTTCCAATTGTT+CGG | 0.393173 | 4_2:+45493311 | Msa0602160:CDS |
| TAATGGCCTACAAGAGCATT+TGG | 0.393395 | 4_2:+45493687 | Msa0602160:CDS |
| AAATGGAGAAATTTCACTTT+GGG | 0.400386 | 4_2:+45493245 | Msa0602160:CDS |
| GTAGGCCATTATGGACTTGA+TGG | 0.402975 | 4_2:-45493675 | None:intergenic |
| GCAGCAGGGACTGGTGGAAA+TGG | 0.437312 | 4_2:-45492783 | None:intergenic |
| TTTGCTCTTGATGCTTAATC+CGG | 0.440596 | 4_2:+45495622 | Msa0602160:three_prime_UTR |
| CTCGCAGCTTCCTCATTGCC+CGG | 0.447826 | 4_2:+45492879 | Msa0602160:CDS |
| TTCAGCAGGAAGCGGAGCTA+AGG | 0.451942 | 4_2:-45492639 | None:intergenic |
| TTACCAATAAAACACGCATC+CGG | 0.452573 | 4_2:-45493552 | None:intergenic |
| GCTCCATGATACACGATTGA+TGG | 0.454593 | 4_2:-45493529 | None:intergenic |
| CAGTTCAGGCCAACCAGGTC+CGG | 0.460674 | 4_2:-45495641 | None:intergenic |
| TATACCCATCAAGTCCATAA+TGG | 0.460910 | 4_2:+45493670 | Msa0602160:CDS |
| GCATTAGCACTAGGAGCAGC+AGG | 0.469369 | 4_2:-45492798 | None:intergenic |
| GCACTAGGAGCAGCAGGGAC+TGG | 0.470970 | 4_2:-45492792 | None:intergenic |
| GCAAGGATAGAATGAATTGA+TGG | 0.478088 | 4_2:-45493121 | None:intergenic |
| TTCGTCATCTTCTCAATCAC+TGG | 0.478409 | 4_2:+45492851 | Msa0602160:CDS |
| AAAATGGAGAAATTTCACTT+TGG | 0.479657 | 4_2:+45493244 | Msa0602160:CDS |
| TTCAACAGATTGTGAAGGAC+CGG | 0.486254 | 4_2:-45492898 | None:intergenic |
| CTCGGTTCTGCACGTGCTAG+TGG | 0.487109 | 4_2:-45495435 | None:intergenic |
| CTTGATGCTTAATCCGGACC+TGG | 0.488222 | 4_2:+45495628 | Msa0602160:three_prime_UTR |
| ATTGTTTGCAAGTTACATCA+AGG | 0.496676 | 4_2:+45493070 | Msa0602160:CDS |
| CACAAGTTACAACGCATAGC+TGG | 0.501837 | 4_2:-45493854 | None:intergenic |
| TGCTCCTAGTGCTAATGCTA+TGG | 0.504585 | 4_2:+45492803 | Msa0602160:CDS |
| TATCCATCAATCGTGTATCA+TGG | 0.506540 | 4_2:+45493526 | Msa0602160:CDS |
| TAATGCTATGGCAGCATGGA+TGG | 0.508726 | 4_2:+45492815 | Msa0602160:CDS |
| GGCGTGCAATGTCCATTTCT+AGG | 0.509480 | 4_2:-45492614 | None:intergenic |
| TGATGGTGGTGTTAATGACT+TGG | 0.513959 | 4_2:+45493813 | Msa0602160:CDS |
| TCATCAAACAACCGAGGCGC+TGG | 0.518820 | 4_2:-45493034 | None:intergenic |
| AACTTGCAAACAATAGTTGT+AGG | 0.521125 | 4_2:-45493061 | None:intergenic |
| AGGAAGGATCCATATTCTAT+GGG | 0.522964 | 4_2:+45492579 | Msa0602160:CDS |
| ATGCTTAATCCGGACCTGGT+TGG | 0.524884 | 4_2:+45495632 | Msa0602160:three_prime_UTR |
| GTTCATACTGCAATTTCAGC+AGG | 0.526147 | 4_2:-45492653 | None:intergenic |
| AAATTTCACTTTGGGAAGCA+AGG | 0.530007 | 4_2:+45493253 | Msa0602160:CDS |
| ATAATCTACTCAAACAGTTC+AGG | 0.531722 | 4_2:-45495655 | None:intergenic |
| ATGCTATGGCAGCATGGATG+GGG | 0.537993 | 4_2:+45492817 | Msa0602160:CDS |
| ATGGCAGCATGGATGGGGAA+TGG | 0.543000 | 4_2:+45492822 | Msa0602160:CDS |
| CAATCGTGTATCATGGAGCC+CGG | 0.546229 | 4_2:+45493533 | Msa0602160:CDS |
| TACCAATAAAACACGCATCC+GGG | 0.547103 | 4_2:-45493551 | None:intergenic |
| TAGGCCATTATGGACTTGAT+GGG | 0.547198 | 4_2:-45493674 | None:intergenic |
| TGTTTGAGTAGATTATGTAC+AGG | 0.548216 | 4_2:+45495662 | Msa0602160:three_prime_UTR |
| AGGCGCTGGTTGAGATGTAA+AGG | 0.556676 | 4_2:-45493020 | None:intergenic |
| CAGCTATGCGTTGTAACTTG+TGG | 0.559744 | 4_2:+45493855 | Msa0602160:exon |
| TCCTTCACAATCTGTTGAAG+TGG | 0.572914 | 4_2:+45492902 | Msa0602160:CDS |
| CTTTGAATTTGAAAGAATCG+TGG | 0.574718 | 4_2:+45493502 | Msa0602160:CDS |
| TCAAACAGTTCAGGCCAACC+AGG | 0.576128 | 4_2:-45495646 | None:intergenic |
| CTAGGAGCAGCAGGGACTGG+TGG | 0.576994 | 4_2:-45492789 | None:intergenic |
| ATAGTTGTTCATATTTGGTG+AGG | 0.581137 | 4_2:+45495473 | Msa0602160:three_prime_UTR |
| TTACATCTCAACCAGCGCCT+CGG | 0.581571 | 4_2:+45493023 | Msa0602160:CDS |
| ACTGCAATTTCAGCAGGAAG+CGG | 0.585191 | 4_2:-45492647 | None:intergenic |
| AATGCTATGGCAGCATGGAT+GGG | 0.591262 | 4_2:+45492816 | Msa0602160:CDS |
| TTGAAACTTCTGTAGTTTAG+GGG | 0.592256 | 4_2:+45495696 | Msa0602160:three_prime_UTR |
| ATACTAGAATTAATAATCAG+AGG | 0.599553 | 4_2:-45495745 | None:intergenic |
| GCAGGAAGCGGAGCTAAGGT+AGG | 0.605899 | 4_2:-45492635 | None:intergenic |
| GTGCTAATGCTATGGCAGCA+TGG | 0.615792 | 4_2:+45492811 | Msa0602160:CDS |
| TCTGCATTAATATTAAAGGA+AGG | 0.619229 | 4_2:+45492563 | Msa0602160:CDS |
| TTACAGATTGATGCTCATGA+TGG | 0.621330 | 4_2:+45493796 | Msa0602160:intron |
| TGGCCTACAAGAGCATTTGG+AGG | 0.623760 | 4_2:+45493690 | Msa0602160:CDS |
| TTGTGAAGGACCGGGCAATG+AGG | 0.639575 | 4_2:-45492889 | None:intergenic |
| GCTGCCATAGCATTAGCACT+AGG | 0.651168 | 4_2:-45492807 | None:intergenic |
| TCAACAGATTGTGAAGGACC+GGG | 0.651999 | 4_2:-45492897 | None:intergenic |
| TATGCTCTAGTAGATGTGCT+CGG | 0.653014 | 4_2:-45495453 | None:intergenic |
| CAGATTGATGCTCATGATGG+TGG | 0.661463 | 4_2:+45493799 | Msa0602160:intron |
| ACCACTTCAACAGATTGTGA+AGG | 0.665246 | 4_2:-45492903 | None:intergenic |
| CATTAGCACTAGGAGCAGCA+GGG | 0.667884 | 4_2:-45492797 | None:intergenic |
| GCATGCTTTCCAAAACACAC+CGG | 0.710220 | 4_2:-45495498 | None:intergenic |
| AGTGATTGAGAAGATGACGA+AGG | 0.717724 | 4_2:-45492849 | None:intergenic |
| GGAAGTTCATCAAACAACCG+AGG | 0.724533 | 4_2:-45493040 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGATAAAATTGTTATTTT+CGG | + | chr4_2:45492703-45492722 | Msa0602160:intron | 10.0% |
| !! | TTATTATAGTACTAAATTAA+AGG | - | chr4_2:45493379-45493398 | None:intergenic | 10.0% |
| !! | TATAATATAAGAGTTTATAT+AGG | + | chr4_2:45494262-45494281 | Msa0602160:intron | 10.0% |
| !!! | ATTATTAATAGTAATTTTAC+CGG | + | chr4_2:45495025-45495044 | Msa0602160:intron | 10.0% |
| !! | GTAATTAATAATAATAACAA+CGG | - | chr4_2:45495250-45495269 | None:intergenic | 10.0% |
| !! | TAATATATGCTAATATTTAA+TGG | + | chr4_2:45495562-45495581 | Msa0602160:three_prime_UTR | 10.0% |
| !! | CAAAATTAAGTAATAATAAG+TGG | - | chr4_2:45492758-45492777 | None:intergenic | 15.0% |
| !!! | TAAAATGATCTTTTATGTTA+TGG | + | chr4_2:45493448-45493467 | Msa0602160:intron | 15.0% |
| !!! | TGATATTTTATTTTCTTTTC+AGG | + | chr4_2:45493616-45493635 | Msa0602160:intron | 15.0% |
| !! | AAATAAAATAAGAGAATAGA+AGG | + | chr4_2:45494394-45494413 | Msa0602160:intron | 15.0% |
| !! | AATAAAATAAGAGAATAGAA+GGG | + | chr4_2:45494395-45494414 | Msa0602160:intron | 15.0% |
| !! | CTTTAATTAATAATAACAGT+AGG | - | chr4_2:45495171-45495190 | None:intergenic | 15.0% |
| !! | CTACTGTTATTATTAATTAA+AGG | + | chr4_2:45495169-45495188 | Msa0602160:intron | 15.0% |
| !! | TTATTATTATTAATTACCGA+CGG | + | chr4_2:45495253-45495272 | Msa0602160:intron | 15.0% |
| !!! | TTTATTTTAATTTACCAGCA+AGG | - | chr4_2:45493141-45493160 | None:intergenic | 20.0% |
| !! | AAAATAACTAATCAAGTTTC+TGG | - | chr4_2:45493187-45493206 | None:intergenic | 20.0% |
| !! | CTGTTTCAATTAAACTTAAT+AGG | - | chr4_2:45493215-45493234 | None:intergenic | 20.0% |
| !! | TTAAGTTTAATTGAAACAGT+TGG | + | chr4_2:45493216-45493235 | Msa0602160:intron | 20.0% |
| !!! | GAAATATTCCATATTTTGAA+AGG | - | chr4_2:45493303-45493322 | None:intergenic | 20.0% |
| !!! | AAATTTCGTAAAACTTTTGA+GGG | - | chr4_2:45494122-45494141 | None:intergenic | 20.0% |
| !!! | TAAATTTCGTAAAACTTTTG+AGG | - | chr4_2:45494123-45494142 | None:intergenic | 20.0% |
| !!! | TTTTATATAGAGGAAGAAAA+TGG | + | chr4_2:45494294-45494313 | Msa0602160:intron | 20.0% |
| !! | ATAAAATAAGAGAATAGAAG+GGG | + | chr4_2:45494396-45494415 | Msa0602160:intron | 20.0% |
| !! | AAAACTTGTGAGTTAATTAT+GGG | + | chr4_2:45494707-45494726 | Msa0602160:intron | 20.0% |
| !! | TATGGTAATTACTTTGAATT+TGG | + | chr4_2:45494815-45494834 | Msa0602160:intron | 20.0% |
| !! | ATGGTAATTACTTTGAATTT+GGG | + | chr4_2:45494816-45494835 | Msa0602160:intron | 20.0% |
| !! | TGTTATTATTAATTAAAGGC+AGG | + | chr4_2:45495173-45495192 | Msa0602160:intron | 20.0% |
| !! | GTTATTATTAATTAAAGGCA+GGG | + | chr4_2:45495174-45495193 | Msa0602160:intron | 20.0% |
| !! | ATACTAGAATTAATAATCAG+AGG | - | chr4_2:45495748-45495767 | None:intergenic | 20.0% |
| ! | GACATCTGCATTAATATTAA+AGG | + | chr4_2:45492559-45492578 | Msa0602160:CDS | 25.0% |
| ! | TCTGCATTAATATTAAAGGA+AGG | + | chr4_2:45492563-45492582 | Msa0602160:CDS | 25.0% |
| ! | AATTGAAATCCCATAGAATA+TGG | - | chr4_2:45492591-45492610 | None:intergenic | 25.0% |
| ! | ATTTCAATTTCACCTAGAAA+TGG | + | chr4_2:45492602-45492621 | Msa0602160:CDS | 25.0% |
| ! | TTTCGGTTGTTTATATACAT+TGG | + | chr4_2:45492720-45492739 | Msa0602160:intron | 25.0% |
| ! | AAAATGGAGAAATTTCACTT+TGG | + | chr4_2:45493244-45493263 | Msa0602160:CDS | 25.0% |
| ! | AAATGGAGAAATTTCACTTT+GGG | + | chr4_2:45493245-45493264 | Msa0602160:CDS | 25.0% |
| ! | TATCAAAGCCTTTCAAAATA+TGG | + | chr4_2:45493292-45493311 | Msa0602160:CDS | 25.0% |
| ! | ATGGAATATTTCCAATTGTT+CGG | + | chr4_2:45493311-45493330 | Msa0602160:CDS | 25.0% |
| !! | AATGATCTTTTATGTTATGG+TGG | + | chr4_2:45493451-45493470 | Msa0602160:intron | 25.0% |
| !! | AGTAAAATGATCTTTTGAAC+AGG | + | chr4_2:45493479-45493498 | Msa0602160:intron | 25.0% |
| !!! | GCTGGTTTTTTTAAATGAAA+AGG | - | chr4_2:45493839-45493858 | None:intergenic | 25.0% |
| ! | TGGAGATGATAAGTTAATTA+AGG | + | chr4_2:45493875-45493894 | Msa0602160:three_prime_UTR | 25.0% |
| !! | GGTATTACATAGTTATTTCA+TGG | - | chr4_2:45494101-45494120 | None:intergenic | 25.0% |
| !! | ACAAGAATTTTACATAGACT+TGG | + | chr4_2:45494184-45494203 | Msa0602160:intron | 25.0% |
| !!! | GCATTATCACTTTTATATAG+AGG | + | chr4_2:45494284-45494303 | Msa0602160:intron | 25.0% |
| ! | TAAAATAAGAGAATAGAAGG+GGG | + | chr4_2:45494397-45494416 | Msa0602160:intron | 25.0% |
| ! | TAGAGATTTCATGAAATTAG+AGG | + | chr4_2:45494517-45494536 | Msa0602160:intron | 25.0% |
| ! | GAAAACTTGTGAGTTAATTA+TGG | + | chr4_2:45494706-45494725 | Msa0602160:intron | 25.0% |
| ! | AAACTTGTGAGTTAATTATG+GGG | + | chr4_2:45494708-45494727 | Msa0602160:intron | 25.0% |
| !!! | TCATTCATTGATTCTTTAGA+AGG | + | chr4_2:45494791-45494810 | Msa0602160:intron | 25.0% |
| !!! | CATTCATTGATTCTTTAGAA+GGG | + | chr4_2:45494792-45494811 | Msa0602160:intron | 25.0% |
| ! | TGGTAATTACTTTGAATTTG+GGG | + | chr4_2:45494817-45494836 | Msa0602160:intron | 25.0% |
| ! | TTAAATTGTTGGAACAATGT+TGG | + | chr4_2:45494886-45494905 | Msa0602160:intron | 25.0% |
| ! | TAAATTGTTGGAACAATGTT+GGG | + | chr4_2:45494887-45494906 | Msa0602160:intron | 25.0% |
| !! | ATTAATAGTAATTTTACCGG+CGG | + | chr4_2:45495028-45495047 | Msa0602160:intron | 25.0% |
| ! | CCTCTATATGTGTTAATTAT+AGG | - | chr4_2:45495138-45495157 | None:intergenic | 25.0% |
| ! | CCTATAATTAACACATATAG+AGG | + | chr4_2:45495135-45495154 | Msa0602160:intron | 25.0% |
| ! | ATAATTAACACATATAGAGG+CGG | + | chr4_2:45495138-45495157 | Msa0602160:intron | 25.0% |
| !! | TTACATGTGATTATGTCTTT+TGG | + | chr4_2:45495534-45495553 | Msa0602160:three_prime_UTR | 25.0% |
| !! | TACATGTGATTATGTCTTTT+GGG | + | chr4_2:45495535-45495554 | Msa0602160:three_prime_UTR | 25.0% |
| !!! | TTTTGAAACTTCTGTAGTTT+AGG | + | chr4_2:45495694-45495713 | Msa0602160:three_prime_UTR | 25.0% |
| !! | TTTGAAACTTCTGTAGTTTA+GGG | + | chr4_2:45495695-45495714 | Msa0602160:three_prime_UTR | 25.0% |
| CTATATTGACAACTCTTTAC+AGG | + | chr4_2:45492979-45492998 | Msa0602160:intron | 30.0% | |
| AACTTGCAAACAATAGTTGT+AGG | - | chr4_2:45493064-45493083 | None:intergenic | 30.0% | |
| ATTGTTTGCAAGTTACATCA+AGG | + | chr4_2:45493070-45493089 | Msa0602160:CDS | 30.0% | |
| AGGATCAACTGTAACAAATA+TGG | + | chr4_2:45493090-45493109 | Msa0602160:CDS | 30.0% | |
| CTTTGAATTTGAAAGAATCG+TGG | + | chr4_2:45493502-45493521 | Msa0602160:CDS | 30.0% | |
| AAGCATTAATCAAGCAACAT+CGG | - | chr4_2:45493594-45493613 | None:intergenic | 30.0% | |
| ! | TCCTAGTGTTTTATCTGTTT+TGG | + | chr4_2:45494008-45494027 | Msa0602160:intron | 30.0% |
| ACCAAAACAGATAAAACACT+AGG | - | chr4_2:45494012-45494031 | None:intergenic | 30.0% | |
| AGACTGAAGTTTCAAAATAG+TGG | - | chr4_2:45494035-45494054 | None:intergenic | 30.0% | |
| TGTAGATCAAGTTTATTGCT+GGG | + | chr4_2:45494540-45494559 | Msa0602160:intron | 30.0% | |
| AACATGCAATAAGGAATAGA+TGG | + | chr4_2:45494569-45494588 | Msa0602160:intron | 30.0% | |
| ! | AACAAGGATTTGTGTTGATA+CGG | + | chr4_2:45494634-45494653 | Msa0602160:intron | 30.0% |
| GAAGCTTAAAGTGATAACAT+AGG | - | chr4_2:45494746-45494765 | None:intergenic | 30.0% | |
| ! | ATTGATTCTTTAGAAGGGTA+TGG | + | chr4_2:45494797-45494816 | Msa0602160:intron | 30.0% |
| ! | TGAATTTCGTTGGATACTTT+TGG | + | chr4_2:45494859-45494878 | Msa0602160:intron | 30.0% |
| ! | GAATTTCGTTGGATACTTTT+GGG | + | chr4_2:45494860-45494879 | Msa0602160:intron | 30.0% |
| !! | CTTTTGGGAGTTTAAATTGT+TGG | + | chr4_2:45494875-45494894 | Msa0602160:intron | 30.0% |
| GTATCTGTGGATAATAACAT+TGG | + | chr4_2:45494954-45494973 | Msa0602160:intron | 30.0% | |
| ! | TTAATAGTAATTTTACCGGC+GGG | + | chr4_2:45495029-45495048 | Msa0602160:intron | 30.0% |
| TAATTAACACATATAGAGGC+GGG | + | chr4_2:45495139-45495158 | Msa0602160:intron | 30.0% | |
| TGTCTCTAAGTTTCAATAGT+CGG | - | chr4_2:45495216-45495235 | None:intergenic | 30.0% | |
| TAACGAGTAATATAACAAGC+AGG | - | chr4_2:45495368-45495387 | None:intergenic | 30.0% | |
| AGAGCATAGTTGTTCATATT+TGG | + | chr4_2:45495468-45495487 | Msa0602160:three_prime_UTR | 30.0% | |
| ! | ATAGTTGTTCATATTTGGTG+AGG | + | chr4_2:45495473-45495492 | Msa0602160:three_prime_UTR | 30.0% |
| ! | ACATGTGATTATGTCTTTTG+GGG | + | chr4_2:45495536-45495555 | Msa0602160:three_prime_UTR | 30.0% |
| ATAATCTACTCAAACAGTTC+AGG | - | chr4_2:45495658-45495677 | None:intergenic | 30.0% | |
| TGTTTGAGTAGATTATGTAC+AGG | + | chr4_2:45495662-45495681 | Msa0602160:three_prime_UTR | 30.0% | |
| TTGAAACTTCTGTAGTTTAG+GGG | + | chr4_2:45495696-45495715 | Msa0602160:three_prime_UTR | 30.0% | |
| AAGGAAGGATCCATATTCTA+TGG | + | chr4_2:45492578-45492597 | Msa0602160:CDS | 35.0% | |
| AGGAAGGATCCATATTCTAT+GGG | + | chr4_2:45492579-45492598 | Msa0602160:CDS | 35.0% | |
| CTGAAATTGCAGTATGAACT+TGG | + | chr4_2:45492657-45492676 | Msa0602160:intron | 35.0% | |
| GCAAGGATAGAATGAATTGA+TGG | - | chr4_2:45493124-45493143 | None:intergenic | 35.0% | |
| TCAATTCATTCTATCCTTGC+TGG | + | chr4_2:45493124-45493143 | Msa0602160:CDS | 35.0% | |
| !! | GAAACAGTTGGTAGTGAAAA+TGG | + | chr4_2:45493228-45493247 | Msa0602160:intron | 35.0% |
| ! | AAATTTCACTTTGGGAAGCA+AGG | + | chr4_2:45493253-45493272 | Msa0602160:CDS | 35.0% |
| CTGAAATTTGACCGAACAAT+TGG | - | chr4_2:45493325-45493344 | None:intergenic | 35.0% | |
| CAATTGTTCGGTCAAATTTC+AGG | + | chr4_2:45493323-45493342 | Msa0602160:CDS | 35.0% | |
| TATCCATCAATCGTGTATCA+TGG | + | chr4_2:45493526-45493545 | Msa0602160:CDS | 35.0% | |
| TTACCAATAAAACACGCATC+CGG | - | chr4_2:45493555-45493574 | None:intergenic | 35.0% | |
| TATACCCATCAAGTCCATAA+TGG | + | chr4_2:45493670-45493689 | Msa0602160:CDS | 35.0% | |
| TTACAGATTGATGCTCATGA+TGG | + | chr4_2:45493796-45493815 | Msa0602160:intron | 35.0% | |
| TGTCTCATTCTGTGTTTGAA+TGG | + | chr4_2:45493932-45493951 | Msa0602160:intron | 35.0% | |
| ATAGAGGAAGAAAATGGTCT+TGG | + | chr4_2:45494300-45494319 | Msa0602160:intron | 35.0% | |
| ! | TGGCTTTTCAGCAACTAATT+GGG | - | chr4_2:45494357-45494376 | None:intergenic | 35.0% |
| ! | ATGGCTTTTCAGCAACTAAT+TGG | - | chr4_2:45494358-45494377 | None:intergenic | 35.0% |
| GTGTAGATCAAGTTTATTGC+TGG | + | chr4_2:45494539-45494558 | Msa0602160:intron | 35.0% | |
| TAAGGAATAGATGGCTGAAT+TGG | + | chr4_2:45494578-45494597 | Msa0602160:intron | 35.0% | |
| AAGGAATAGATGGCTGAATT+GGG | + | chr4_2:45494579-45494598 | Msa0602160:intron | 35.0% | |
| ! | TTTTCTAAGTTGCTGAGAAG+TGG | - | chr4_2:45494691-45494710 | None:intergenic | 35.0% |
| GTCAAATGCATGAATTTCGT+TGG | + | chr4_2:45494849-45494868 | Msa0602160:intron | 35.0% | |
| TGAAGAATGTCATCAGAACA+TGG | + | chr4_2:45494923-45494942 | Msa0602160:intron | 35.0% | |
| ! | TAATAGTAATTTTACCGGCG+GGG | + | chr4_2:45495030-45495049 | Msa0602160:intron | 35.0% |
| AATTAACACATATAGAGGCG+GGG | + | chr4_2:45495140-45495159 | Msa0602160:intron | 35.0% | |
| CATACATATAAACTCTCCGT+CGG | - | chr4_2:45495272-45495291 | None:intergenic | 35.0% | |
| ATTACTCGTTATCTACTCAC+TGG | + | chr4_2:45495377-45495396 | Msa0602160:intron | 35.0% | |
| ! | CATCAAGAGCAAAGTTGTTT+TGG | - | chr4_2:45495615-45495634 | None:intergenic | 35.0% |
| TTTGCTCTTGATGCTTAATC+CGG | + | chr4_2:45495622-45495641 | Msa0602160:three_prime_UTR | 35.0% | |
| GTTCATACTGCAATTTCAGC+AGG | - | chr4_2:45492656-45492675 | None:intergenic | 40.0% | |
| AGTGATTGAGAAGATGACGA+AGG | - | chr4_2:45492852-45492871 | None:intergenic | 40.0% | |
| TTCGTCATCTTCTCAATCAC+TGG | + | chr4_2:45492851-45492870 | Msa0602160:CDS | 40.0% | |
| TTCAACAGATTGTGAAGGAC+CGG | - | chr4_2:45492901-45492920 | None:intergenic | 40.0% | |
| TCCTTCACAATCTGTTGAAG+TGG | + | chr4_2:45492902-45492921 | Msa0602160:CDS | 40.0% | |
| ACCACTTCAACAGATTGTGA+AGG | - | chr4_2:45492906-45492925 | None:intergenic | 40.0% | |
| TACCAATAAAACACGCATCC+GGG | - | chr4_2:45493554-45493573 | None:intergenic | 40.0% | |
| TAGGCCATTATGGACTTGAT+GGG | - | chr4_2:45493677-45493696 | None:intergenic | 40.0% | |
| AATGCTCTTGTAGGCCATTA+TGG | - | chr4_2:45493687-45493706 | None:intergenic | 40.0% | |
| !! | TAATGGCCTACAAGAGCATT+TGG | + | chr4_2:45493687-45493706 | Msa0602160:CDS | 40.0% |
| ATACCTCCAAATGCTCTTGT+AGG | - | chr4_2:45493696-45493715 | None:intergenic | 40.0% | |
| !! | TGATGGTGGTGTTAATGACT+TGG | + | chr4_2:45493813-45493832 | Msa0602160:CDS | 40.0% |
| ! | AAGAAAATGGTCTTGGTGAC+AGG | + | chr4_2:45494307-45494326 | Msa0602160:intron | 40.0% |
| ! | AGAAAATGGTCTTGGTGACA+GGG | + | chr4_2:45494308-45494327 | Msa0602160:intron | 40.0% |
| ATAGAAGGGGGAAAAAGAGA+AGG | + | chr4_2:45494409-45494428 | Msa0602160:intron | 40.0% | |
| TAGAAGGGGGAAAAAGAGAA+GGG | + | chr4_2:45494410-45494429 | Msa0602160:intron | 40.0% | |
| AGAGTTAGAAAGGGAAACGA+AGG | + | chr4_2:45494439-45494458 | Msa0602160:intron | 40.0% | |
| GAGTTAGAAAGGGAAACGAA+GGG | + | chr4_2:45494440-45494459 | Msa0602160:intron | 40.0% | |
| GGGTAGTGTAACATGCAATA+AGG | + | chr4_2:45494560-45494579 | Msa0602160:intron | 40.0% | |
| ATGGCTGAATTGGGTTACTT+TGG | + | chr4_2:45494588-45494607 | Msa0602160:intron | 40.0% | |
| ! | TGGCTGAATTGGGTTACTTT+GGG | + | chr4_2:45494589-45494608 | Msa0602160:intron | 40.0% |
| !! | TGGGTTACTTTGGGATACTA+AGG | + | chr4_2:45494598-45494617 | Msa0602160:intron | 40.0% |
| TGGGATACTAAGGATAGAAG+AGG | + | chr4_2:45494608-45494627 | Msa0602160:intron | 40.0% | |
| GGGATACTAAGGATAGAAGA+GGG | + | chr4_2:45494609-45494628 | Msa0602160:intron | 40.0% | |
| TGTTGGAACAATGTTGGGTT+TGG | + | chr4_2:45494892-45494911 | Msa0602160:intron | 40.0% | |
| CATGGTAGTTGTAGTATCTG+TGG | + | chr4_2:45494941-45494960 | Msa0602160:intron | 40.0% | |
| AGCCTATCGTCACTATTTAC+AGG | + | chr4_2:45495069-45495088 | Msa0602160:intron | 40.0% | |
| CTATCGTCACTATTTACAGG+CGG | + | chr4_2:45495072-45495091 | Msa0602160:intron | 40.0% | |
| TATCGTCACTATTTACAGGC+GGG | + | chr4_2:45495073-45495092 | Msa0602160:intron | 40.0% | |
| ATTAACACATATAGAGGCGG+GGG | + | chr4_2:45495141-45495160 | Msa0602160:intron | 40.0% | |
| TATGCTCTAGTAGATGTGCT+CGG | - | chr4_2:45495456-45495475 | None:intergenic | 40.0% | |
| ! | GTTCATATTTGGTGAGGTTC+CGG | + | chr4_2:45495479-45495498 | Msa0602160:three_prime_UTR | 40.0% |
| ACTGCAATTTCAGCAGGAAG+CGG | - | chr4_2:45492650-45492669 | None:intergenic | 45.0% | |
| TGCTCCTAGTGCTAATGCTA+TGG | + | chr4_2:45492803-45492822 | Msa0602160:CDS | 45.0% | |
| TAATGCTATGGCAGCATGGA+TGG | + | chr4_2:45492815-45492834 | Msa0602160:CDS | 45.0% | |
| AATGCTATGGCAGCATGGAT+GGG | + | chr4_2:45492816-45492835 | Msa0602160:CDS | 45.0% | |
| TCAACAGATTGTGAAGGACC+GGG | - | chr4_2:45492900-45492919 | None:intergenic | 45.0% | |
| GGAAGTTCATCAAACAACCG+AGG | - | chr4_2:45493043-45493062 | None:intergenic | 45.0% | |
| GAGTGATGAATGCACTGCTA+TGG | + | chr4_2:45493422-45493441 | Msa0602160:intron | 45.0% | |
| GCTCCATGATACACGATTGA+TGG | - | chr4_2:45493532-45493551 | None:intergenic | 45.0% | |
| GTAGGCCATTATGGACTTGA+TGG | - | chr4_2:45493678-45493697 | None:intergenic | 45.0% | |
| CAGATTGATGCTCATGATGG+TGG | + | chr4_2:45493799-45493818 | Msa0602160:intron | 45.0% | |
| CACAAGTTACAACGCATAGC+TGG | - | chr4_2:45493857-45493876 | None:intergenic | 45.0% | |
| CAGCTATGCGTTGTAACTTG+TGG | + | chr4_2:45493855-45493874 | Msa0602160:exon | 45.0% | |
| AGGGTACGAGAGAGTTAGAA+AGG | + | chr4_2:45494429-45494448 | Msa0602160:intron | 45.0% | |
| GGGTACGAGAGAGTTAGAAA+GGG | + | chr4_2:45494430-45494449 | Msa0602160:intron | 45.0% | |
| AGGATAGAAGAGGGAGAACA+AGG | + | chr4_2:45494618-45494637 | Msa0602160:intron | 45.0% | |
| !! | AGTGGATTGAGAACTGATGC+TGG | - | chr4_2:45494673-45494692 | None:intergenic | 45.0% |
| CGCCTGTAAATAGTGACGAT+AGG | - | chr4_2:45495074-45495093 | None:intergenic | 45.0% | |
| ATCGTCACTATTTACAGGCG+GGG | + | chr4_2:45495074-45495093 | Msa0602160:intron | 45.0% | |
| TTAACACATATAGAGGCGGG+GGG | + | chr4_2:45495142-45495161 | Msa0602160:intron | 45.0% | |
| AATTAAAGGCAGGGAGCCTA+AGG | + | chr4_2:45495183-45495202 | Msa0602160:intron | 45.0% | |
| GCATGCTTTCCAAAACACAC+CGG | - | chr4_2:45495501-45495520 | None:intergenic | 45.0% | |
| !!! | TTTTTTTATTTTTTTCTTAA+TGG | - | chr4_2:45494377-45494396 | None:intergenic | 5.0% |
| GGCGTGCAATGTCCATTTCT+AGG | - | chr4_2:45492617-45492636 | None:intergenic | 50.0% | |
| CATTAGCACTAGGAGCAGCA+GGG | - | chr4_2:45492800-45492819 | None:intergenic | 50.0% | |
| GCTGCCATAGCATTAGCACT+AGG | - | chr4_2:45492810-45492829 | None:intergenic | 50.0% | |
| GTGCTAATGCTATGGCAGCA+TGG | + | chr4_2:45492811-45492830 | Msa0602160:CDS | 50.0% | |
| ATGCTATGGCAGCATGGATG+GGG | + | chr4_2:45492817-45492836 | Msa0602160:CDS | 50.0% | |
| !! | AGGCGCTGGTTGAGATGTAA+AGG | - | chr4_2:45493023-45493042 | None:intergenic | 50.0% |
| TTACATCTCAACCAGCGCCT+CGG | + | chr4_2:45493023-45493042 | Msa0602160:CDS | 50.0% | |
| CAATCGTGTATCATGGAGCC+CGG | + | chr4_2:45493533-45493552 | Msa0602160:CDS | 50.0% | |
| ! | AGCCCGGATGCGTGTTTTAT+TGG | + | chr4_2:45493549-45493568 | Msa0602160:CDS | 50.0% |
| !! | TGGCCTACAAGAGCATTTGG+AGG | + | chr4_2:45493690-45493709 | Msa0602160:CDS | 50.0% |
| TAACACATATAGAGGCGGGG+GGG | + | chr4_2:45495143-45495162 | Msa0602160:intron | 50.0% | |
| CTTGATGCTTAATCCGGACC+TGG | + | chr4_2:45495628-45495647 | Msa0602160:three_prime_UTR | 50.0% | |
| ATGCTTAATCCGGACCTGGT+TGG | + | chr4_2:45495632-45495651 | Msa0602160:three_prime_UTR | 50.0% | |
| TCAAACAGTTCAGGCCAACC+AGG | - | chr4_2:45495649-45495668 | None:intergenic | 50.0% | |
| TTCAGCAGGAAGCGGAGCTA+AGG | - | chr4_2:45492642-45492661 | None:intergenic | 55.0% | |
| GCATTAGCACTAGGAGCAGC+AGG | - | chr4_2:45492801-45492820 | None:intergenic | 55.0% | |
| ATGGCAGCATGGATGGGGAA+TGG | + | chr4_2:45492822-45492841 | Msa0602160:CDS | 55.0% | |
| TTGTGAAGGACCGGGCAATG+AGG | - | chr4_2:45492892-45492911 | None:intergenic | 55.0% | |
| TCATCAAACAACCGAGGCGC+TGG | - | chr4_2:45493037-45493056 | None:intergenic | 55.0% | |
| GAAAGGGAAACGAAGGGAGC+TGG | + | chr4_2:45494446-45494465 | Msa0602160:intron | 55.0% | |
| TAAGGCGGGGAGCCTGATTA+AGG | + | chr4_2:45495105-45495124 | Msa0602160:intron | 55.0% | |
| ATAGGCTCCCCGCCTTAATC+AGG | - | chr4_2:45495120-45495139 | None:intergenic | 55.0% | |
| TAAAGGCAGGGAGCCTAAGG+CGG | + | chr4_2:45495186-45495205 | Msa0602160:intron | 55.0% | |
| ! | GGTGAGGTTCCGGTGTGTTT+TGG | + | chr4_2:45495489-45495508 | Msa0602160:three_prime_UTR | 55.0% |
| GCAGGAAGCGGAGCTAAGGT+AGG | - | chr4_2:45492638-45492657 | None:intergenic | 60.0% | |
| ! | GCAGCAGGGACTGGTGGAAA+TGG | - | chr4_2:45492786-45492805 | None:intergenic | 60.0% |
| CTCGCAGCTTCCTCATTGCC+CGG | + | chr4_2:45492879-45492898 | Msa0602160:CDS | 60.0% | |
| CGATAGGCTCCCCGTCAAAG+TGG | - | chr4_2:45495058-45495077 | None:intergenic | 60.0% | |
| ACAGGCGGGGAGCCTAACTA+AGG | + | chr4_2:45495087-45495106 | Msa0602160:intron | 60.0% | |
| TCAGGCTCCCCGCCTTAGTT+AGG | - | chr4_2:45495102-45495121 | None:intergenic | 60.0% | |
| AAAGGCAGGGAGCCTAAGGC+GGG | + | chr4_2:45495187-45495206 | Msa0602160:intron | 60.0% | |
| ! | AATAGTCGGCTCCCCGCCTT+AGG | - | chr4_2:45495202-45495221 | None:intergenic | 60.0% |
| CTCGGTTCTGCACGTGCTAG+TGG | - | chr4_2:45495438-45495457 | None:intergenic | 60.0% | |
| CAGTTCAGGCCAACCAGGTC+CGG | - | chr4_2:45495644-45495663 | None:intergenic | 60.0% | |
| CTAGGAGCAGCAGGGACTGG+TGG | - | chr4_2:45492792-45492811 | None:intergenic | 65.0% | |
| GCACTAGGAGCAGCAGGGAC+TGG | - | chr4_2:45492795-45492814 | None:intergenic | 65.0% | |
| GGCGGGGAGCCTAACTAAGG+CGG | + | chr4_2:45495090-45495109 | Msa0602160:intron | 65.0% | |
| GCGGGGAGCCTAACTAAGGC+GGG | + | chr4_2:45495091-45495110 | Msa0602160:intron | 65.0% | |
| CGGGGAGCCTAACTAAGGCG+GGG | + | chr4_2:45495092-45495111 | Msa0602160:intron | 65.0% | |
| GGCGGGGAGCCTGATTAAGG+CGG | + | chr4_2:45495108-45495127 | Msa0602160:intron | 65.0% | |
| GCGGGGAGCCTGATTAAGGC+GGG | + | chr4_2:45495109-45495128 | Msa0602160:intron | 65.0% | |
| CGGGGAGCCTGATTAAGGCG+GGG | + | chr4_2:45495110-45495129 | Msa0602160:intron | 65.0% | |
| AAGGCAGGGAGCCTAAGGCG+GGG | + | chr4_2:45495188-45495207 | Msa0602160:intron | 65.0% | |
| CCGTCAAAGTGGCTCCCCGC+CGG | - | chr4_2:45495047-45495066 | None:intergenic | 70.0% | |
| ! | CCGGCGGGGAGCCACTTTGA+CGG | + | chr4_2:45495044-45495063 | Msa0602160:intron | 70.0% |
| ! | CGGCGGGGAGCCACTTTGAC+GGG | + | chr4_2:45495045-45495064 | Msa0602160:intron | 70.0% |
| ! | GGCGGGGAGCCACTTTGACG+GGG | + | chr4_2:45495046-45495065 | Msa0602160:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 45492542 | 45495799 | 45492542 | ID=Msa0602160;Name=Msa0602160 |
| chr4_2 | mRNA | 45492542 | 45495799 | 45492542 | ID=Msa0602160-mRNA-1;Parent=Msa0602160;Name=Msa0602160-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0.85|0.75|1|0.85|0.75|8|393|244 |
| chr4_2 | exon | 45492542 | 45492667 | 45492542 | ID=Msa0602160-mRNA-1:exon:10200;Parent=Msa0602160-mRNA-1 |
| chr4_2 | exon | 45492783 | 45492923 | 45492783 | ID=Msa0602160-mRNA-1:exon:10201;Parent=Msa0602160-mRNA-1 |
| chr4_2 | exon | 45493001 | 45493145 | 45493001 | ID=Msa0602160-mRNA-1:exon:10202;Parent=Msa0602160-mRNA-1 |
| chr4_2 | exon | 45493235 | 45493344 | 45493235 | ID=Msa0602160-mRNA-1:exon:10203;Parent=Msa0602160-mRNA-1 |
| chr4_2 | exon | 45493501 | 45493570 | 45493501 | ID=Msa0602160-mRNA-1:exon:10204;Parent=Msa0602160-mRNA-1 |
| chr4_2 | exon | 45493638 | 45493711 | 45493638 | ID=Msa0602160-mRNA-1:exon:10205;Parent=Msa0602160-mRNA-1 |
| chr4_2 | exon | 45493802 | 45493896 | 45493802 | ID=Msa0602160-mRNA-1:exon:10206;Parent=Msa0602160-mRNA-1 |
| chr4_2 | exon | 45495433 | 45495799 | 45495433 | ID=Msa0602160-mRNA-1:exon:10207;Parent=Msa0602160-mRNA-1 |
| chr4_2 | CDS | 45492542 | 45492667 | 45492542 | ID=Msa0602160-mRNA-1:cds;Parent=Msa0602160-mRNA-1 |
| chr4_2 | CDS | 45492783 | 45492923 | 45492783 | ID=Msa0602160-mRNA-1:cds;Parent=Msa0602160-mRNA-1 |
| chr4_2 | CDS | 45493001 | 45493145 | 45493001 | ID=Msa0602160-mRNA-1:cds;Parent=Msa0602160-mRNA-1 |
| chr4_2 | CDS | 45493235 | 45493344 | 45493235 | ID=Msa0602160-mRNA-1:cds;Parent=Msa0602160-mRNA-1 |
| chr4_2 | CDS | 45493501 | 45493570 | 45493501 | ID=Msa0602160-mRNA-1:cds;Parent=Msa0602160-mRNA-1 |
| chr4_2 | CDS | 45493638 | 45493711 | 45493638 | ID=Msa0602160-mRNA-1:cds;Parent=Msa0602160-mRNA-1 |
| chr4_2 | CDS | 45493802 | 45493870 | 45493802 | ID=Msa0602160-mRNA-1:cds;Parent=Msa0602160-mRNA-1 |
| chr4_2 | three_prime_UTR | 45493871 | 45493896 | 45493871 | ID=Msa0602160-mRNA-1:three_prime_utr;Parent=Msa0602160-mRNA-1 |
| chr4_2 | three_prime_UTR | 45495433 | 45495799 | 45495433 | ID=Msa0602160-mRNA-1:three_prime_utr;Parent=Msa0602160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
