AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0602590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0602590 MtrunA17_Chr1g0202341 75.592 676 161 2 66 739 12 685 0.0 1082
Msa0602590 MtrunA17_Chr5g0448761 44.651 645 335 7 95 726 52 687 0.0 560
Msa0602590 MtrunA17_Chr5g0440451 35.285 649 370 10 102 726 42 664 9.40e-133 421
Msa0602590 MtrunA17_Chr5g0441581 38.927 578 328 11 98 667 27 587 2.90e-127 399
Msa0602590 MtrunA17_Chr1g0207551 34.944 621 391 5 101 720 32 640 9.34e-127 401
Msa0602590 MtrunA17_Chr5g0448511 40.302 464 269 3 266 726 1 459 1.10e-126 393
Msa0602590 MtrunA17_Chr2g0296781 38.272 567 331 10 107 664 1 557 4.59e-123 389
Msa0602590 MtrunA17_Chr2g0329031 34.076 628 391 10 102 727 13 619 1.90e-122 388
Msa0602590 MtrunA17_Chr3g0080351 34.439 633 368 7 101 719 74 673 2.13e-121 388
Msa0602590 MtrunA17_Chr3g0118611 40.693 462 264 3 278 734 118 574 1.37e-118 379
Msa0602590 MtrunA17_Chr2g0287061 35.469 640 349 12 93 723 173 757 3.04e-117 376
Msa0602590 MtrunA17_Chr2g0287061 28.571 154 83 4 97 238 23 161 7.64e-13 72.8
Msa0602590 MtrunA17_Chr2g0291581 33.538 650 389 13 98 733 67 687 1.46e-114 365
Msa0602590 MtrunA17_Chr8g0363841 32.239 670 431 9 91 741 3 668 2.16e-113 362
Msa0602590 MtrunA17_Chr6g0477261 41.295 448 252 6 225 664 2 446 4.46e-112 358
Msa0602590 MtrunA17_Chr2g0324011 33.625 571 367 6 98 663 5 568 4.54e-112 356
Msa0602590 MtrunA17_Chr1g0198761 31.176 757 477 16 82 819 23 754 1.86e-108 352
Msa0602590 MtrunA17_Chr1g0196541 36.525 564 333 10 107 658 1 551 5.05e-108 349
Msa0602590 MtrunA17_Chr2g0287651 32.679 560 368 4 107 663 79 632 4.34e-104 343
Msa0602590 MtrunA17_Chr6g0458391 33.157 567 347 7 103 663 225 765 3.46e-102 335
Msa0602590 MtrunA17_Chr6g0458391 30.168 179 107 5 98 264 86 258 2.15e-13 74.3
Msa0602590 MtrunA17_Chr1g0203721 30.380 632 431 6 106 733 66 692 3.61e-102 338
Msa0602590 MtrunA17_Chr3g0082121 32.242 611 388 8 103 707 43 633 3.44e-97 320
Msa0602590 MtrunA17_Chr2g0291591 33.858 508 326 6 102 607 63 562 3.14e-94 308
Msa0602590 MtrunA17_Chr1g0203051 30.838 561 356 8 110 651 75 622 4.30e-92 304
Msa0602590 MtrunA17_Chr2g0276841 29.688 640 413 16 103 728 70 686 3.24e-84 285
Msa0602590 MtrunA17_Chr2g0294841 26.621 725 483 14 101 798 43 745 2.73e-81 278
Msa0602590 MtrunA17_Chr2g0290391 29.367 664 423 16 80 723 29 666 1.10e-74 258
Msa0602590 MtrunA17_Chr1g0164591 36.808 307 185 2 191 497 11 308 3.21e-67 227
Msa0602590 MtrunA17_Chr5g0431001 33.099 426 272 7 103 517 61 484 1.10e-63 223
Msa0602590 MtrunA17_Chr7g0258861 37.676 284 172 4 102 382 9 290 3.34e-59 204
Msa0602590 MtrunA17_Chr3g0077241 70.652 92 21 2 68 156 1 89 3.67e-35 130
Msa0602590 MtrunA17_Chr4g0052331 57.895 95 38 1 63 155 1 95 1.33e-28 110
Msa0602590 MtrunA17_Chr2g0308841 27.149 221 154 3 443 659 6 223 1.47e-24 104
Msa0602590 MtrunA17_Chr2g0329361 40.367 109 64 1 101 208 59 167 1.52e-21 95.1
Msa0602590 MtrunA17_Chr1g0149131 32.727 110 74 0 383 492 1 110 8.76e-19 83.2
Msa0602590 MtrunA17_Chr2g0329421 34.375 128 72 4 85 205 5 127 4.22e-18 84.0
Msa0602590 MtrunA17_Chr4g0033611 33.803 142 78 5 81 212 47 182 5.77e-18 84.7
Msa0602590 MtrunA17_Chr3g0078041 38.136 118 60 5 102 212 49 160 1.29e-16 80.1
Msa0602590 MtrunA17_Chr7g0233911 39.252 107 59 3 102 205 33 136 4.78e-16 78.2
Msa0602590 MtrunA17_Chr5g0407081 92.308 39 3 0 859 897 580 618 6.50e-15 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0602590 AT4G38180.1 42.291 681 368 9 58 719 15 689 5.68e-180 540
Msa0602590 AT4G15090.1 34.409 651 410 8 98 741 46 686 5.87e-131 413
Msa0602590 AT4G15090.5 34.409 651 410 8 98 741 46 686 5.87e-131 413
Msa0602590 AT4G15090.3 34.409 651 410 8 98 741 46 686 5.87e-131 413
Msa0602590 AT4G15090.2 34.409 651 410 8 98 741 46 686 5.87e-131 413
Msa0602590 AT4G15090.4 34.409 651 410 8 98 741 46 686 5.87e-131 413
Msa0602590 AT2G27110.2 36.320 625 358 9 102 723 48 635 8.48e-129 408
Msa0602590 AT2G27110.1 36.320 625 358 9 102 723 48 635 8.48e-129 408
Msa0602590 AT3G06250.2 34.281 633 344 10 102 723 189 760 2.09e-123 392
Msa0602590 AT3G06250.2 31.298 131 66 4 76 205 9 116 1.75e-13 75.1
Msa0602590 AT3G06250.1 34.281 633 344 10 102 723 189 760 2.09e-123 392
Msa0602590 AT3G06250.1 31.298 131 66 4 76 205 9 116 1.75e-13 75.1
Msa0602590 AT3G06250.3 34.281 633 344 10 102 723 189 760 2.09e-123 392
Msa0602590 AT3G06250.3 31.298 131 66 4 76 205 9 116 1.75e-13 75.1
Msa0602590 AT5G18960.2 34.961 635 340 11 102 723 210 784 3.06e-122 389
Msa0602590 AT5G18960.2 33.962 106 54 3 101 205 41 131 9.83e-13 72.8
Msa0602590 AT5G18960.1 34.961 635 340 11 102 723 210 784 3.06e-122 389
Msa0602590 AT5G18960.1 33.962 106 54 3 101 205 41 131 9.83e-13 72.8
Msa0602590 AT2G27110.3 40.359 446 260 2 278 723 51 490 6.65e-117 373
Msa0602590 AT3G22170.2 31.230 634 393 7 99 720 66 668 3.66e-111 361
Msa0602590 AT3G22170.1 31.230 634 393 7 99 720 66 668 3.66e-111 361
Msa0602590 AT1G76320.3 31.877 618 398 8 107 722 1 597 8.77e-108 347
Msa0602590 AT1G76320.1 31.877 618 398 8 107 722 1 597 2.95e-107 348
Msa0602590 AT1G76320.4 31.877 618 398 8 107 722 1 597 2.95e-107 348
Msa0602590 AT1G76320.2 31.877 618 398 8 107 722 1 597 3.46e-107 348
Msa0602590 AT4G38170.1 35.785 503 305 7 282 781 21 508 3.52e-106 339
Msa0602590 AT1G52520.1 30.218 642 404 11 103 727 85 699 3.54e-101 331
Msa0602590 AT2G32250.5 31.949 626 367 9 106 727 41 611 1.44e-100 331
Msa0602590 AT2G32250.2 31.949 626 367 9 106 727 41 611 3.62e-100 331
Msa0602590 AT2G32250.4 31.949 626 367 9 106 727 41 611 3.62e-100 331
Msa0602590 AT2G32250.6 31.949 626 367 9 106 727 41 611 3.91e-100 331
Msa0602590 AT2G32250.1 31.949 626 367 9 106 727 41 611 3.91e-100 331
Msa0602590 AT2G32250.3 31.949 626 367 9 106 727 41 611 3.91e-100 331
Msa0602590 AT2G32250.8 32.000 625 366 9 107 727 1 570 1.35e-99 328
Msa0602590 AT2G32250.7 32.000 625 366 9 107 727 1 570 2.01e-99 328
Msa0602590 AT4G19990.7 30.901 644 378 11 101 724 33 629 3.13e-97 322
Msa0602590 AT4G19990.3 30.901 644 378 11 101 724 19 615 3.23e-97 322
Msa0602590 AT4G19990.4 30.901 644 378 11 101 724 19 615 3.23e-97 322
Msa0602590 AT4G19990.5 30.901 644 378 11 101 724 19 615 3.39e-97 322
Msa0602590 AT4G19990.6 30.901 644 378 11 101 724 19 615 7.16e-97 321
Msa0602590 AT4G19990.2 30.901 644 378 11 101 724 19 615 7.16e-97 321
Msa0602590 AT1G80010.1 28.899 654 418 16 103 732 95 725 2.72e-91 305
Msa0602590 AT4G19990.1 31.843 559 325 9 175 724 47 558 4.59e-90 301
Msa0602590 AT5G28530.1 29.063 640 409 15 103 717 55 674 1.47e-78 269
Msa0602590 AT1G10240.2 28.271 665 444 16 81 728 24 672 8.13e-78 267
Msa0602590 AT1G10240.1 28.271 665 444 16 81 728 24 672 8.13e-78 267
Msa0602590 AT5G28530.3 28.750 640 407 15 103 717 55 670 2.65e-77 266
Msa0602590 AT5G28530.2 28.750 640 407 15 103 717 55 670 2.65e-77 266
Msa0602590 AT5G28530.4 25.549 638 371 20 103 717 55 611 9.07e-49 184
Msa0602590 AT5G28530.5 25.235 638 369 20 103 717 55 607 1.04e-47 181
Msa0602590 AT3G59470.3 37.736 106 62 2 102 206 69 171 6.79e-18 84.7
Msa0602590 AT3G59470.1 37.736 106 62 2 102 206 69 171 6.79e-18 84.7
Msa0602590 AT3G59470.2 37.736 106 62 2 102 206 81 183 9.41e-18 84.7
Msa0602590 AT3G07500.1 34.559 136 80 4 72 206 8 135 9.82e-15 74.7
Msa0602590 AT4G12850.2 32.743 113 70 2 102 213 10 117 8.45e-14 69.7
Msa0602590 AT4G12850.4 33.333 105 64 2 102 205 10 109 1.92e-13 68.9
Msa0602590 AT4G12850.1 33.628 113 69 2 102 213 10 117 2.02e-13 70.1
Msa0602590 AT2G43280.1 30.216 139 87 5 77 212 1 132 2.82e-13 70.1

Find 156 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTCTGCGATAAATATT+TGG 0.074822 4_2:+46364731 None:intergenic
AGAATGGCTTACAAATATTT+TGG 0.184037 4_2:-46365516 Msa0602590:CDS
TGCTGGATCACACAAATTTA+TGG 0.194971 4_2:+46364219 None:intergenic
TTTGTCTTTCTTAGCATTTA+TGG 0.224272 4_2:+46364495 None:intergenic
TTCATTGTTTAATAGTATTA+TGG 0.225254 4_2:-46364416 Msa0602590:CDS
GTAAATTAGCAAATTGCTTT+TGG 0.235893 4_2:-46365554 Msa0602590:CDS
CATTCCTTCAAAGGGCTCTA+AGG 0.261818 4_2:+46366172 None:intergenic
ATTGATGTGCTTGATGATTC+TGG 0.262820 4_2:-46365789 Msa0602590:CDS
TATTCATACTTTCACTCCTT+TGG 0.266644 4_2:+46364974 None:intergenic
AAAGTACGTGGACGACCTTT+AGG 0.294239 4_2:+46364187 None:intergenic
ATTCATACTTTCACTCCTTT+GGG 0.296462 4_2:+46364975 None:intergenic
GTTTCTCTTTGTAAATTTCA+TGG 0.299756 4_2:+46364674 None:intergenic
CACTATGTTCATGATAGATT+TGG 0.302307 4_2:+46365187 None:intergenic
AGGAATCCACTTTGCTCTAA+TGG 0.305027 4_2:+46365038 None:intergenic
TCAAAGGTGGTGGGTTTCTC+TGG 0.316993 4_2:-46363741 Msa0602590:intron
TTTCTCTGCGATAAATATTT+GGG 0.322581 4_2:+46364732 None:intergenic
CTGATGACTTTGATTCTGAT+TGG 0.333619 4_2:-46365119 Msa0602590:CDS
GCAGTGTTCATGAAGACTTT+TGG 0.334930 4_2:-46361287 Msa0602590:CDS
CTCGGTTTCTGCCTTCTTCA+AGG 0.341954 4_2:+46364449 None:intergenic
AATAATTAATAACATCTTGT+TGG 0.345738 4_2:+46365697 None:intergenic
AGAACGGATGGTAGGGTAAT+TGG 0.353327 4_2:-46366056 Msa0602590:CDS
TGAAAAGTCACATGATAGTT+AGG 0.355149 4_2:+46364652 None:intergenic
AAGTACGTGGACGACCTTTA+GGG 0.355782 4_2:+46364188 None:intergenic
TTGGACAACTACGTTTGTTA+TGG 0.355995 4_2:+46364095 None:intergenic
GAATTAACAAACTCTTCATT+TGG 0.362566 4_2:+46364280 None:intergenic
ATGCCCTTTGTTCCATTCAC+TGG 0.364662 4_2:-46365447 Msa0602590:CDS
TTTACGAATGAAAGGCAGTT+TGG 0.366602 4_2:-46364167 Msa0602590:CDS
GACAAATCAGGAGTTGATAT+TGG 0.366622 4_2:+46361243 None:intergenic
TATTTATTTGTTAAGTATGT+TGG 0.372145 4_2:+46365474 None:intergenic
TTGTCACATGTTTGAATTTG+TGG 0.379138 4_2:-46364602 Msa0602590:CDS
GATCACACAAATTTATGGTT+TGG 0.379156 4_2:+46364224 None:intergenic
TGATGACTTTGATTCTGATT+GGG 0.384063 4_2:-46365118 Msa0602590:CDS
ACAAGGTACGCGAGGAATAA+AGG 0.387113 4_2:-46366113 Msa0602590:CDS
AATTGTCAGTTGAAGAATCC+TGG 0.396913 4_2:-46365609 Msa0602590:CDS
AGTCATCAGTAGTGATAGTT+TGG 0.400979 4_2:+46365133 None:intergenic
TCGACAAAACTATCCTTTAG+TGG 0.405205 4_2:+46363766 None:intergenic
AATCACAAAACTTGATCAAT+TGG 0.417160 4_2:-46364314 Msa0602590:CDS
TGAATGGAACAAAGGGCATT+AGG 0.418217 4_2:+46365451 None:intergenic
GTTTGGTCATCGGAGACTTT+AGG 0.421530 4_2:+46364241 None:intergenic
TTGTTTGGTTGCTACGTACT+TGG 0.423904 4_2:-46365356 Msa0602590:CDS
TTTGCGCACTTTATATCCTA+TGG 0.426133 4_2:-46364821 Msa0602590:CDS
CAGACCTGCTTTGCCACTAA+AGG 0.433153 4_2:-46363779 Msa0602590:CDS
CTGCATACTGATGCAATACT+TGG 0.435997 4_2:+46361309 None:intergenic
GTGCTTGATGATTCTGGTAT+AGG 0.438869 4_2:-46365783 Msa0602590:CDS
AATGAAGTGTAGTTATTGCC+AGG 0.439936 4_2:-46364125 Msa0602590:CDS
CAAATTTATGGTTTGGTCAT+CGG 0.439940 4_2:+46364231 None:intergenic
ACTTTCACTCCTTTGGGTGG+TGG 0.440297 4_2:+46364981 None:intergenic
CATGAACATACCAACATGAT+TGG 0.442395 4_2:-46366257 Msa0602590:CDS
CTATCCTTTAGTGGCAAAGC+AGG 0.446607 4_2:+46363775 None:intergenic
TTTCTGCCATTCGCTGCTAA+AGG 0.450551 4_2:-46362470 Msa0602590:CDS
TAAACATGAGCGAGTGAGTA+AGG 0.453255 4_2:-46367450 Msa0602590:CDS
GGTTGATTCAAGGTCTAGAA+TGG 0.460592 4_2:-46365532 Msa0602590:CDS
GCTGTTTGTGTTGAAGCTGC+AGG 0.463453 4_2:-46362527 Msa0602590:CDS
AAAAGTGTTCAAGATATTCC+AGG 0.469314 4_2:-46364770 Msa0602590:CDS
ATATTGCAATTCAAGCTTTG+CGG 0.469966 4_2:-46364342 Msa0602590:CDS
TATCATCTCGAGGACAAATC+AGG 0.471407 4_2:+46361231 None:intergenic
CTCAATATGTTCTAAGTCGA+TGG 0.471677 4_2:-46364519 Msa0602590:CDS
CTTAGAGCCCTTTGAAGGAA+TGG 0.476103 4_2:-46366171 Msa0602590:CDS
TGTCACATGTTTGAATTTGT+GGG 0.478839 4_2:-46364601 Msa0602590:CDS
TGTAGTTATTGCCAGGGAAA+AGG 0.481720 4_2:-46364118 Msa0602590:CDS
TTTGAAGCCTCTTCTTCCAT+AGG 0.482226 4_2:+46364805 None:intergenic
ACTTCTATTTCTAATGCAGT+TGG 0.482823 4_2:-46365282 Msa0602590:CDS
ATTCCTTCAAAGGGCTCTAA+GGG 0.488264 4_2:+46366173 None:intergenic
CTCCCCTTAGAGCCCTTTGA+AGG 0.489876 4_2:-46366176 Msa0602590:CDS
CAAGATATTCCAGGATGAGT+TGG 0.493978 4_2:-46364761 Msa0602590:CDS
ACGAGTTGCAAGATAACAAA+TGG 0.498356 4_2:-46365077 Msa0602590:CDS
ATTGTCAGTTGAAGAATCCT+GGG 0.500058 4_2:-46365608 Msa0602590:CDS
TGGTGAATCTAGATCGTCTC+AGG 0.500672 4_2:-46367420 Msa0602590:CDS
TAGATTTGGTTCAAGTACTC+TGG 0.502715 4_2:+46365201 None:intergenic
ATATCAAGAAAAGTGAAGAT+AGG 0.503755 4_2:-46365920 Msa0602590:CDS
GGGATCCAACCAACTCATCC+TGG 0.504100 4_2:+46364752 None:intergenic
GTATCATCTACTCGTGTTGG+AGG 0.505441 4_2:-46367518 Msa0602590:CDS
TCAAGAGATTCTTTGTTCAA+AGG 0.507548 4_2:-46366033 Msa0602590:CDS
GGCTCTAAGGGGAGCTCCAA+TGG 0.508044 4_2:+46366185 None:intergenic
TTTGTCGAACTCAAAGGTGG+TGG 0.509167 4_2:-46363751 Msa0602590:CDS
CAATAATGATGATTCGCCTC+TGG 0.509253 4_2:+46365249 None:intergenic
TGTAAACTCCATTCCTTCAA+AGG 0.510474 4_2:+46366163 None:intergenic
ATTGGAATTAAATATTCAGT+TGG 0.514043 4_2:+46361261 None:intergenic
AAGGTATCATCTACTCGTGT+TGG 0.514109 4_2:-46367521 Msa0602590:CDS
TTTATATCCTATGGAAGAAG+AGG 0.514709 4_2:-46364812 Msa0602590:CDS
TGTGTCACAAACTTGCTCAA+TGG 0.518813 4_2:+46364919 None:intergenic
CGAATCATCATTATTGTATG+TGG 0.520472 4_2:-46365242 Msa0602590:CDS
AGATTCTTTGTTCAAAGGAG+GGG 0.523644 4_2:-46366028 Msa0602590:CDS
GTAAACTCCATTCCTTCAAA+GGG 0.524520 4_2:+46366164 None:intergenic
CATACTTTCACTCCTTTGGG+TGG 0.526942 4_2:+46364978 None:intergenic
GCAATTGAAGACCTTGAAGA+AGG 0.526963 4_2:-46364460 Msa0602590:CDS
GGATATAAAGTGCGCAAAAG+TGG 0.527400 4_2:+46364826 None:intergenic
AGTGGTGGTGTTGATAATGT+TGG 0.527691 4_2:-46365726 Msa0602590:CDS
AATTTCATGGATCTTGTATG+TGG 0.529618 4_2:+46364687 None:intergenic
TCTCAATGATAGACTACCAT+TGG 0.530176 4_2:-46366201 Msa0602590:CDS
GATGACTTTGATTCTGATTG+GGG 0.531464 4_2:-46365117 Msa0602590:CDS
ACAATGAAGTACTTGAAGCT+CGG 0.532331 4_2:+46364431 None:intergenic
TCGCTTAACCGATGCAGTCA+TGG 0.534841 4_2:+46367484 None:intergenic
ACTCCAGTGAATGGAACAAA+GGG 0.535906 4_2:+46365444 None:intergenic
ACGTACTTGGTTAGAAGCAA+TGG 0.537041 4_2:-46365343 Msa0602590:CDS
TAAATCAAGAACGGATGGTA+GGG 0.537380 4_2:-46366063 Msa0602590:CDS
GCTAAGAAAGACAAAAGTAA+AGG 0.538204 4_2:-46364487 Msa0602590:CDS
TATTTCTAATGCAGTTGGAA+AGG 0.539160 4_2:-46365277 Msa0602590:CDS
GAGATTCTTTGTTCAAAGGA+GGG 0.539548 4_2:-46366029 Msa0602590:CDS
TGTGTTGAATGTATTCATCA+AGG 0.542961 4_2:-46364563 Msa0602590:CDS
ACATGCACAAGGACATGCTC+GGG 0.546450 4_2:+46367383 None:intergenic
AGAGATTCTTTGTTCAAAGG+AGG 0.550163 4_2:-46366030 Msa0602590:CDS
ATATTCCAGGATGAGTTGGT+TGG 0.550283 4_2:-46364757 Msa0602590:CDS
CTAAATCAAGAACGGATGGT+AGG 0.552075 4_2:-46366064 Msa0602590:CDS
GTCCAAGTTTAAAACATGGA+AGG 0.552269 4_2:-46364078 Msa0602590:intron
CATACTGATGCAATACTTGG+AGG 0.552865 4_2:+46361312 None:intergenic
ATTATCAACACCACCACTCT+CGG 0.553163 4_2:+46365731 None:intergenic
AAATTGTGACGTACATAAGA+AGG 0.554526 4_2:+46365018 None:intergenic
TTGTCGAACTCAAAGGTGGT+GGG 0.560817 4_2:-46363750 Msa0602590:CDS
TGCAATTCAAGCTTTGCGGA+AGG 0.564681 4_2:-46364338 Msa0602590:CDS
GAGAGAAGAATGTTAAAACA+AGG 0.570551 4_2:-46364858 Msa0602590:CDS
CGATCTAGATTCACCATGCA+TGG 0.572037 4_2:+46367427 None:intergenic
CGACTTAGAACATATTGAGA+AGG 0.572343 4_2:+46364523 None:intergenic
ACAAATCCTTTAGCAGCGAA+TGG 0.574847 4_2:+46362464 None:intergenic
ATGAAGTGTAGTTATTGCCA+GGG 0.575207 4_2:-46364124 Msa0602590:CDS
AACATGCACAAGGACATGCT+CGG 0.582097 4_2:+46367382 None:intergenic
TCAAACAAGGGTAGGATGCA+AGG 0.583329 4_2:-46365952 Msa0602590:CDS
AACTCCAGTGAATGGAACAA+AGG 0.585483 4_2:+46365443 None:intergenic
TGATGATTAACTCCAGTGAA+TGG 0.587906 4_2:+46365435 None:intergenic
CCAGCACGTGATGTCCCTAA+AGG 0.590090 4_2:-46364202 Msa0602590:CDS
GCCTGGTGTTGCAGGTCTGG+TGG 0.594525 4_2:-46362560 Msa0602590:intron
GACTTAGAACATATTGAGAA+GGG 0.597241 4_2:+46364524 None:intergenic
TCAAGAAAAGTGAAGATAGG+TGG 0.599813 4_2:-46365917 Msa0602590:CDS
CCACGTACTTTACGAATGAA+AGG 0.600807 4_2:-46364175 Msa0602590:CDS
TCTACTCCATTAGAGCAAAG+TGG 0.602196 4_2:-46365044 Msa0602590:CDS
ACTGCATCGGTTAAGCGAGA+GGG 0.602399 4_2:-46367479 Msa0602590:CDS
CCTTTAGGGACATCACGTGC+TGG 0.605923 4_2:+46364202 None:intergenic
GACTGCATCGGTTAAGCGAG+AGG 0.605990 4_2:-46367480 Msa0602590:CDS
GCATTTCAAATGGACGCAGA+AGG 0.608694 4_2:-46365576 Msa0602590:CDS
ATCATCTGAGCCAATCATGT+TGG 0.609119 4_2:+46366247 None:intergenic
GTTACTAAATCAAGAACGGA+TGG 0.614185 4_2:-46366068 Msa0602590:CDS
TTTGTGTTGAAGCTGCAGGA+AGG 0.615745 4_2:-46362523 Msa0602590:CDS
CAACACAAACAGCAGAGCAG+CGG 0.616751 4_2:+46362537 None:intergenic
AGTTGTCCAAGTTTAAAACA+TGG 0.618004 4_2:-46364082 Msa0602590:CDS
CAAGTTCACCATGACTGCAT+CGG 0.618410 4_2:-46367492 Msa0602590:CDS
CCTTTCATTCGTAAAGTACG+TGG 0.618728 4_2:+46364175 None:intergenic
TTATAGTACATGATCAAACA+AGG 0.619283 4_2:-46365965 Msa0602590:CDS
AATGGTAGTCTATCATTGAG+AGG 0.621900 4_2:+46366203 None:intergenic
AATGGCAGAAAATCAGCACC+AGG 0.625686 4_2:+46362482 None:intergenic
GTACATGATCAAACAAGGGT+AGG 0.628232 4_2:-46365960 Msa0602590:CDS
CTGGAATGTCCACCACCCAA+AGG 0.639739 4_2:-46364990 Msa0602590:CDS
TCGTGTTACTAAATCAAGAA+CGG 0.641576 4_2:-46366072 Msa0602590:CDS
CTGCATCGGTTAAGCGAGAG+GGG 0.642131 4_2:-46367478 Msa0602590:CDS
GTTTGTGACACAATATGAGA+AGG 0.645219 4_2:-46364908 Msa0602590:CDS
TCTCTTGAACTATCTGAGAG+AGG 0.647890 4_2:-46364388 Msa0602590:CDS
AATACTACACAAGGTACGCG+AGG 0.651596 4_2:-46366121 Msa0602590:CDS
TCAGTGTTATGTACCGAGAG+TGG 0.652006 4_2:-46365744 Msa0602590:CDS
ACTTGGTTAGAAGCAATGGA+TGG 0.652582 4_2:-46365339 Msa0602590:CDS
CGAGTGAGTAAGGCCATGCA+TGG 0.666718 4_2:-46367440 Msa0602590:CDS
TCTTGATGCACGTTATAACA+AGG 0.672143 4_2:-46364884 Msa0602590:CDS
CTTATGCGGGAACATGCACA+AGG 0.678621 4_2:+46367372 None:intergenic
TTCCTTCAAAGGGCTCTAAG+GGG 0.687755 4_2:+46366174 None:intergenic
GGCACAGCAGTATCATCTCG+AGG 0.693105 4_2:+46361221 None:intergenic
TATAGTACATGATCAAACAA+GGG 0.707069 4_2:-46365964 Msa0602590:CDS
GTGTTATGTACCGAGAGTGG+TGG 0.716148 4_2:-46365741 Msa0602590:CDS
TCTTTAGGAGAACTACACTG+AGG 0.805453 4_2:-46361337 Msa0602590:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAATAAATAAATTAAA+AGG - chr4_2:46366644-46366663 Msa0602590:intron 0.0%
!!! TTCTTTTTTCAAATTTTTTT+GGG + chr4_2:46362762-46362781 None:intergenic 10.0%
!!! TTTCTTTTTTCAAATTTTTT+TGG + chr4_2:46362763-46362782 None:intergenic 10.0%
!! AAAAATTTGAAAAAAGAAAA+TGG - chr4_2:46362764-46362783 Msa0602590:intron 10.0%
!!! AAGTATGAATAAATTTTTTA+AGG - chr4_2:46363795-46363814 Msa0602590:intron 10.0%
!!! AGTATGAATAAATTTTTTAA+GGG - chr4_2:46363796-46363815 Msa0602590:intron 10.0%
!! TGATCAAAAAAATAATATAA+TGG - chr4_2:46365961-46365980 Msa0602590:CDS 10.0%
!! AGAAAAGAACAAAATAATTT+CGG - chr4_2:46361928-46361947 Msa0602590:intron 15.0%
!! AATAATTAATAACATCTTGT+TGG + chr4_2:46363063-46363082 None:intergenic 15.0%
!!! TATTTATTTGTTAAGTATGT+TGG + chr4_2:46363286-46363305 None:intergenic 15.0%
!! TTCATTGTTTAATAGTATTA+TGG - chr4_2:46364341-46364360 Msa0602590:CDS 15.0%
!!! TATTGGTATTATTATTTTCT+TGG - chr4_2:46364867-46364886 Msa0602590:CDS 15.0%
!!! ATATTATTTTTTTGATCAAG+CGG + chr4_2:46365959-46365978 None:intergenic 15.0%
!!! TTTTATTATTACAATGTGAA+AGG - chr4_2:46366105-46366124 Msa0602590:CDS 15.0%
!! TTTATTATTACAATGTGAAA+GGG - chr4_2:46366106-46366125 Msa0602590:CDS 15.0%
!!! CATATCTTTTTTTCTTTTTT+TGG - chr4_2:46366878-46366897 Msa0602590:intron 15.0%
!!! CATTTTAAAAGTAAATGATG+TGG + chr4_2:46361886-46361905 None:intergenic 20.0%
!! TTCATATTTAAACATGTTTG+TGG - chr4_2:46362329-46362348 Msa0602590:intron 20.0%
!!! TTAACTTGCTTTTCTAAATA+TGG - chr4_2:46362402-46362421 Msa0602590:intron 20.0%
!! ATGTAAAAAAATACTACACA+AGG - chr4_2:46362627-46362646 Msa0602590:intron 20.0%
!!! AATAAGTTTTTTTTGCACTT+TGG + chr4_2:46362951-46362970 None:intergenic 20.0%
!! AGACAAAAACAATTAGAAAA+TGG - chr4_2:46363094-46363113 Msa0602590:intron 20.0%
!!! TAAATTAGCAAATTGCTTTT+GGG - chr4_2:46363204-46363223 Msa0602590:intron 20.0%
!! AATTCACACTAGAAATATTA+AGG + chr4_2:46365081-46365100 None:intergenic 20.0%
!!! TATTATTTTTTTGATCAAGC+GGG + chr4_2:46365958-46365977 None:intergenic 20.0%
!!! AGAGAATTTATTGATAACTT+AGG - chr4_2:46366014-46366033 Msa0602590:CDS 20.0%
!!! TTTGAGTTTTTTTGTTTAGT+AGG - chr4_2:46366371-46366390 Msa0602590:intron 20.0%
!! GTCATTTCAAAAAAAAAAGT+TGG - chr4_2:46366560-46366579 Msa0602590:intron 20.0%
!! TTCAATTTCAGATTCAAATT+TGG - chr4_2:46366727-46366746 Msa0602590:intron 20.0%
!! TCAATTTCAGATTCAAATTT+GGG - chr4_2:46366728-46366747 Msa0602590:intron 20.0%
!! CATTTGGTTATAATTCTATT+TGG + chr4_2:46367164-46367183 None:intergenic 20.0%
!! ACTCTGAATGAAAATAAAAA+GGG - chr4_2:46367242-46367261 Msa0602590:intron 20.0%
!! AAAATGACAAGAAAAATGAA+TGG - chr4_2:46367304-46367323 Msa0602590:intron 20.0%
!! ATTGGAATTAAATATTCAGT+TGG + chr4_2:46367499-46367518 None:intergenic 20.0%
!!! TCAACACATCTAAGTTTTAT+TGG + chr4_2:46361703-46361722 None:intergenic 25.0%
! AATAAAACTTAGATGTGTTG+AGG - chr4_2:46361702-46361721 Msa0602590:intron 25.0%
! CATATTCAAGAGTTTAATTG+TGG - chr4_2:46361811-46361830 Msa0602590:intron 25.0%
!!! ATTGAGTTTTGTTGTATTGA+GGG + chr4_2:46362025-46362044 None:intergenic 25.0%
! TCAATACAACAAAACTCAAT+CGG - chr4_2:46362025-46362044 Msa0602590:intron 25.0%
!!! CTTTCTCTTTTTTCAATTGA+AGG - chr4_2:46362050-46362069 Msa0602590:intron 25.0%
!!! AGTCTCCAAATATTTTTGTT+TGG - chr4_2:46362297-46362316 Msa0602590:intron 25.0%
! CATTGCCAAACAAAAATATT+TGG + chr4_2:46362305-46362324 None:intergenic 25.0%
!! GAATTTTTATTCAGCATAAC+AGG - chr4_2:46362435-46362454 Msa0602590:intron 25.0%
! TTATAGTACATGATCAAACA+AGG - chr4_2:46362792-46362811 Msa0602590:intron 25.0%
! TATAGTACATGATCAAACAA+GGG - chr4_2:46362793-46362812 Msa0602590:intron 25.0%
! ATATCAAGAAAAGTGAAGAT+AGG - chr4_2:46362837-46362856 Msa0602590:intron 25.0%
!! TAAGAAACTGTGAACTTTTT+GGG + chr4_2:46362910-46362929 None:intergenic 25.0%
!! GTTTTTCTATGCATTTCAAA+TGG - chr4_2:46363171-46363190 Msa0602590:intron 25.0%
!! GTAAATTAGCAAATTGCTTT+TGG - chr4_2:46363203-46363222 Msa0602590:intron 25.0%
!! AGAATGGCTTACAAATATTT+TGG - chr4_2:46363241-46363260 Msa0602590:intron 25.0%
!!! TTACAAATATTTTGGTGATG+TGG - chr4_2:46363249-46363268 Msa0602590:intron 25.0%
!! TGATCAGTGATAATAGTTTT+AGG + chr4_2:46363451-46363470 None:intergenic 25.0%
! TTTCTCTGCGATAAATATTT+GGG + chr4_2:46364028-46364047 None:intergenic 25.0%
! GTTTCTCTTTGTAAATTTCA+TGG + chr4_2:46364086-46364105 None:intergenic 25.0%
! TTTGTCTTTCTTAGCATTTA+TGG + chr4_2:46364265-46364284 None:intergenic 25.0%
! AATCACAAAACTTGATCAAT+TGG - chr4_2:46364443-46364462 Msa0602590:CDS 25.0%
! GAATTAACAAACTCTTCATT+TGG + chr4_2:46364480-46364499 None:intergenic 25.0%
! AAATATCAATTGGTACTATC+AGG + chr4_2:46365164-46365183 None:intergenic 25.0%
! CCTACAAATCAAATATCAAT+TGG + chr4_2:46365174-46365193 None:intergenic 25.0%
!!! CCAATTGATATTTGATTTGT+AGG - chr4_2:46365171-46365190 Msa0602590:CDS 25.0%
!!! GTTTTTACTTTAGTTTTAGC+TGG - chr4_2:46365195-46365214 Msa0602590:CDS 25.0%
! ATAAAAGTTGTGCAAAAGAT+CGG - chr4_2:46365448-46365467 Msa0602590:CDS 25.0%
!! ATGGATTGAAACAAATTCTT+TGG - chr4_2:46365550-46365569 Msa0602590:CDS 25.0%
! TTGTAACAAAGGTAAAACAA+AGG + chr4_2:46365773-46365792 None:intergenic 25.0%
!! GTTTTACCTTTGTTACAAAA+TGG - chr4_2:46365775-46365794 Msa0602590:CDS 25.0%
!! GTATTTCTATATCTTGTACT+CGG - chr4_2:46365901-46365920 Msa0602590:CDS 25.0%
!! ATAATGGTCTTAAAAAAGTC+AGG - chr4_2:46365977-46365996 Msa0602590:CDS 25.0%
! GGTATAAGTTAAAAGTAACA+TGG - chr4_2:46366035-46366054 Msa0602590:CDS 25.0%
! GAAAACATGTACTTTATTGT+CGG + chr4_2:46366586-46366605 None:intergenic 25.0%
! CAATTTCAGATTCAAATTTG+GGG - chr4_2:46366729-46366748 Msa0602590:intron 25.0%
! AGAAAAATGATTGTTAGCTA+TGG + chr4_2:46366789-46366808 None:intergenic 25.0%
! ATGTATTTGACTATTCAAGT+AGG - chr4_2:46367034-46367053 Msa0602590:intron 25.0%
!!! TTTGATGATGTTCAATCATT+TGG + chr4_2:46367180-46367199 None:intergenic 25.0%
! GACTCTGAATGAAAATAAAA+AGG - chr4_2:46367241-46367260 Msa0602590:intron 25.0%
CACACTCAAGATTCTTATTA+TGG - chr4_2:46361471-46361490 Msa0602590:intron 30.0%
ACTCAAGATTCTTATTATGG+TGG - chr4_2:46361474-46361493 Msa0602590:intron 30.0%
TAAACTCTTGAATATGCTTG+TGG + chr4_2:46361807-46361826 None:intergenic 30.0%
!!! GATTGAGTTTTGTTGTATTG+AGG + chr4_2:46362026-46362045 None:intergenic 30.0%
! GAAGAAGATTATGGAAGTTT+TGG - chr4_2:46362172-46362191 Msa0602590:intron 30.0%
TAACCACATCTTCAATTACT+TGG - chr4_2:46362220-46362239 Msa0602590:intron 30.0%
AAACCAAGTAATTGAAGATG+TGG + chr4_2:46362226-46362245 None:intergenic 30.0%
!!! TAAAGGTTTTAGCTTTCGTA+TGG - chr4_2:46362661-46362680 Msa0602590:intron 30.0%
!!! AAAGGTTTTAGCTTTCGTAT+GGG - chr4_2:46362662-46362681 Msa0602590:intron 30.0%
! TCGTGTTACTAAATCAAGAA+CGG - chr4_2:46362685-46362704 Msa0602590:intron 30.0%
TCAAGAGATTCTTTGTTCAA+AGG - chr4_2:46362724-46362743 Msa0602590:intron 30.0%
! AAGAAACTGTGAACTTTTTG+GGG + chr4_2:46362909-46362928 None:intergenic 30.0%
! CTAAGAAACTGTGAACTTTT+TGG + chr4_2:46362911-46362930 None:intergenic 30.0%
!!! ACACTGATGCTATTTTACTA+GGG + chr4_2:46363000-46363019 None:intergenic 30.0%
!!! AACACTGATGCTATTTTACT+AGG + chr4_2:46363001-46363020 None:intergenic 30.0%
! AACCAAAAAGTATAGACTGT+TGG + chr4_2:46363348-46363367 None:intergenic 30.0%
!!! AAACTGAAGAGAGTTTTGTT+TGG - chr4_2:46363386-46363405 Msa0602590:intron 30.0%
!! ACTTCTATTTCTAATGCAGT+TGG - chr4_2:46363475-46363494 Msa0602590:intron 30.0%
! TATTTCTAATGCAGTTGGAA+AGG - chr4_2:46363480-46363499 Msa0602590:intron 30.0%
CGAATCATCATTATTGTATG+TGG - chr4_2:46363515-46363534 Msa0602590:intron 30.0%
CACTATGTTCATGATAGATT+TGG + chr4_2:46363573-46363592 None:intergenic 30.0%
TGATGACTTTGATTCTGATT+GGG - chr4_2:46363639-46363658 Msa0602590:intron 30.0%
AAATTGTGACGTACATAAGA+AGG + chr4_2:46363742-46363761 None:intergenic 30.0%
ATTCATACTTTCACTCCTTT+GGG + chr4_2:46363785-46363804 None:intergenic 30.0%
TATTCATACTTTCACTCCTT+TGG + chr4_2:46363786-46363805 None:intergenic 30.0%
GAGAGAAGAATGTTAAAACA+AGG - chr4_2:46363899-46363918 Msa0602590:intron 30.0%
TTTATATCCTATGGAAGAAG+AGG - chr4_2:46363945-46363964 Msa0602590:intron 30.0%
!! AAAAGTGTTCAAGATATTCC+AGG - chr4_2:46363987-46364006 Msa0602590:intron 30.0%
CTTTCTCTGCGATAAATATT+TGG + chr4_2:46364029-46364048 None:intergenic 30.0%
AATTTCATGGATCTTGTATG+TGG + chr4_2:46364073-46364092 None:intergenic 30.0%
TGAAAAGTCACATGATAGTT+AGG + chr4_2:46364108-46364127 None:intergenic 30.0%
TTGTCACATGTTTGAATTTG+TGG - chr4_2:46364155-46364174 Msa0602590:CDS 30.0%
TGTCACATGTTTGAATTTGT+GGG - chr4_2:46364156-46364175 Msa0602590:CDS 30.0%
TGTGTTGAATGTATTCATCA+AGG - chr4_2:46364194-46364213 Msa0602590:CDS 30.0%
GACTTAGAACATATTGAGAA+GGG + chr4_2:46364236-46364255 None:intergenic 30.0%
GCTAAGAAAGACAAAAGTAA+AGG - chr4_2:46364270-46364289 Msa0602590:CDS 30.0%
ATATTGCAATTCAAGCTTTG+CGG - chr4_2:46364415-46364434 Msa0602590:CDS 30.0%
!! CAAATTTATGGTTTGGTCAT+CGG + chr4_2:46364529-46364548 None:intergenic 30.0%
GATCACACAAATTTATGGTT+TGG + chr4_2:46364536-46364555 None:intergenic 30.0%
! AGTTTGGAATTGCTCAAAAA+AGG - chr4_2:46364606-46364625 Msa0602590:CDS 30.0%
! AGTTGTCCAAGTTTAAAACA+TGG - chr4_2:46364675-46364694 Msa0602590:CDS 30.0%
!! TACCTTCCATGTTTTAAACT+TGG + chr4_2:46364684-46364703 None:intergenic 30.0%
ATATCACACCTAAAAGACAT+TGG + chr4_2:46364788-46364807 None:intergenic 30.0%
TTTAGGTGTGATATCATCAA+TGG - chr4_2:46364794-46364813 Msa0602590:CDS 30.0%
!! TTCTAGTTTGGTTGATTAAG+AGG - chr4_2:46364844-46364863 Msa0602590:CDS 30.0%
! TTTGGTTGATTAAGAGGTAT+TGG - chr4_2:46364850-46364869 Msa0602590:CDS 30.0%
TTTGTGTTAATTCCTGATGT+TGG - chr4_2:46364948-46364967 Msa0602590:CDS 30.0%
! GTGATTTCAGATTTTGGATA+TGG - chr4_2:46365040-46365059 Msa0602590:CDS 30.0%
!!! GAGAGTGCTTAGTTTTTTTT+TGG - chr4_2:46365118-46365137 Msa0602590:CDS 30.0%
!!! AGTGCTTAGTTTTTTTTTGG+TGG - chr4_2:46365121-46365140 Msa0602590:CDS 30.0%
!!! GTGCTTAGTTTTTTTTTGGT+GGG - chr4_2:46365122-46365141 Msa0602590:CDS 30.0%
TAACAAAGGTAAAACAAAGG+TGG + chr4_2:46365770-46365789 None:intergenic 30.0%
TGAAAGGGATTCTAAATAGT+TGG - chr4_2:46366121-46366140 Msa0602590:CDS 30.0%
!!! TTGTTTTTTAATCTGAAGCC+TGG - chr4_2:46366257-46366276 Msa0602590:CDS 30.0%
ACTCAAAAACCTCCTAATAA+AGG + chr4_2:46366358-46366377 None:intergenic 30.0%
CGGAAGGAAAAAAAACAAAA+AGG + chr4_2:46366496-46366515 None:intergenic 30.0%
CAATAACTCTCTCATACTTA+TGG + chr4_2:46367115-46367134 None:intergenic 30.0%
CATAAGTATGAGAGAGTTAT+TGG - chr4_2:46367113-46367132 Msa0602590:intron 30.0%
ACATGCTAGCATATACTATA+TGG - chr4_2:46367212-46367231 Msa0602590:intron 30.0%
GGGAATCAAACTCATAAATA+TGG - chr4_2:46367262-46367281 Msa0602590:intron 30.0%
TGACAAGAAAAATGAATGGA+CGG - chr4_2:46367308-46367327 Msa0602590:intron 30.0%
ATGAAATATGAAGGTCATCA+TGG + chr4_2:46367357-46367376 None:intergenic 30.0%
CAACTCTGAATGAAATATGA+AGG + chr4_2:46367366-46367385 None:intergenic 30.0%
! TTTTCTGCTTTATGCTCTTT+AGG - chr4_2:46367405-46367424 Msa0602590:CDS 30.0%
GTTATCATACGCATATGAGA+AGG - chr4_2:46361538-46361557 Msa0602590:intron 35.0%
AACTTAGATGTGTTGAGGAA+AGG - chr4_2:46361707-46361726 Msa0602590:intron 35.0%
AAGTTTACACAGTCATCCAA+TGG - chr4_2:46361853-46361872 Msa0602590:intron 35.0%
GTTACAGAGTTGGAAGTTAA+AGG + chr4_2:46361988-46362007 None:intergenic 35.0%
AAGCAATAGAGTTACAGAGT+TGG + chr4_2:46361998-46362017 None:intergenic 35.0%
TCCATAATCTTCTTCGAAGA+CGG + chr4_2:46362167-46362186 None:intergenic 35.0%
! TGGTCTGAGACATTATAAAC+AGG - chr4_2:46362192-46362211 Msa0602590:intron 35.0%
CATGAACATACCAACATGAT+TGG - chr4_2:46362500-46362519 Msa0602590:CDS 35.0%
AATGGTAGTCTATCATTGAG+AGG + chr4_2:46362557-46362576 None:intergenic 35.0%
TCTCAATGATAGACTACCAT+TGG - chr4_2:46362556-46362575 Msa0602590:intron 35.0%
GTAAACTCCATTCCTTCAAA+GGG + chr4_2:46362596-46362615 None:intergenic 35.0%
TGTAAACTCCATTCCTTCAA+AGG + chr4_2:46362597-46362616 None:intergenic 35.0%
GTTACTAAATCAAGAACGGA+TGG - chr4_2:46362689-46362708 Msa0602590:intron 35.0%
TAAATCAAGAACGGATGGTA+GGG - chr4_2:46362694-46362713 Msa0602590:intron 35.0%
AGAGATTCTTTGTTCAAAGG+AGG - chr4_2:46362727-46362746 Msa0602590:intron 35.0%
GAGATTCTTTGTTCAAAGGA+GGG - chr4_2:46362728-46362747 Msa0602590:intron 35.0%
AGATTCTTTGTTCAAAGGAG+GGG - chr4_2:46362729-46362748 Msa0602590:intron 35.0%
TCAAGAAAAGTGAAGATAGG+TGG - chr4_2:46362840-46362859 Msa0602590:intron 35.0%
! ATTGATGTGCTTGATGATTC+TGG - chr4_2:46362968-46362987 Msa0602590:intron 35.0%
AATTGTCAGTTGAAGAATCC+TGG - chr4_2:46363148-46363167 Msa0602590:intron 35.0%
ATTGTCAGTTGAAGAATCCT+GGG - chr4_2:46363149-46363168 Msa0602590:intron 35.0%
TGAAATGCATAGAAAAACCC+AGG + chr4_2:46363169-46363188 None:intergenic 35.0%
!!! ATTGCTTTTGGGTTGATTCA+AGG - chr4_2:46363215-46363234 Msa0602590:intron 35.0%
TGATGATTAACTCCAGTGAA+TGG + chr4_2:46363325-46363344 None:intergenic 35.0%
! CACCAACAGTCTATACTTTT+TGG - chr4_2:46363343-46363362 Msa0602590:intron 35.0%
!!! TTTTTGGTTGTGCTCTGTTA+TGG - chr4_2:46363359-46363378 Msa0602590:intron 35.0%
!! TTTTGGTTGTGCTCTGTTAT+GGG - chr4_2:46363360-46363379 Msa0602590:intron 35.0%
! TAGATTTGGTTCAAGTACTC+TGG + chr4_2:46363559-46363578 None:intergenic 35.0%
AGTCATCAGTAGTGATAGTT+TGG + chr4_2:46363627-46363646 None:intergenic 35.0%
CTGATGACTTTGATTCTGAT+TGG - chr4_2:46363638-46363657 Msa0602590:intron 35.0%
GATGACTTTGATTCTGATTG+GGG - chr4_2:46363640-46363659 Msa0602590:intron 35.0%
ACGAGTTGCAAGATAACAAA+TGG - chr4_2:46363680-46363699 Msa0602590:intron 35.0%
GTTTGTGACACAATATGAGA+AGG - chr4_2:46363849-46363868 Msa0602590:intron 35.0%
TCTTGATGCACGTTATAACA+AGG - chr4_2:46363873-46363892 Msa0602590:intron 35.0%
TTTGCGCACTTTATATCCTA+TGG - chr4_2:46363936-46363955 Msa0602590:intron 35.0%
CGACTTAGAACATATTGAGA+AGG + chr4_2:46364237-46364256 None:intergenic 35.0%
! CTCAATATGTTCTAAGTCGA+TGG - chr4_2:46364238-46364257 Msa0602590:CDS 35.0%
! ACAATGAAGTACTTGAAGCT+CGG + chr4_2:46364329-46364348 None:intergenic 35.0%
TGCTGGATCACACAAATTTA+TGG + chr4_2:46364541-46364560 None:intergenic 35.0%
TTTACGAATGAAAGGCAGTT+TGG - chr4_2:46364590-46364609 Msa0602590:CDS 35.0%
AATGAAGTGTAGTTATTGCC+AGG - chr4_2:46364632-46364651 Msa0602590:CDS 35.0%
ATGAAGTGTAGTTATTGCCA+GGG - chr4_2:46364633-46364652 Msa0602590:CDS 35.0%
! TTGGACAACTACGTTTGTTA+TGG + chr4_2:46364665-46364684 None:intergenic 35.0%
! GTCCAAGTTTAAAACATGGA+AGG - chr4_2:46364679-46364698 Msa0602590:CDS 35.0%
GTCACTGAATCAACTTAACA+TGG + chr4_2:46364762-46364781 None:intergenic 35.0%
! GTGACAAACCAATGTCTTTT+AGG - chr4_2:46364777-46364796 Msa0602590:CDS 35.0%
! CAAACTAGAAGCTTTAACAC+TGG + chr4_2:46364834-46364853 None:intergenic 35.0%
! CAGTGTTAAAGCTTCTAGTT+TGG - chr4_2:46364832-46364851 Msa0602590:CDS 35.0%
TCGACAAAACTATCCTTTAG+TGG + chr4_2:46364994-46365013 None:intergenic 35.0%
!!! GATAGTTTTGTCGAACTCAA+AGG - chr4_2:46365000-46365019 Msa0602590:CDS 35.0%
! TCTGGTGTGATTTCAGATTT+TGG - chr4_2:46365034-46365053 Msa0602590:CDS 35.0%
!! AGATTTTGGATATGGTGCTA+GGG - chr4_2:46365048-46365067 Msa0602590:CDS 35.0%
!!! TTTTTTTTTGGTGGGTGCTA+AGG - chr4_2:46365130-46365149 Msa0602590:CDS 35.0%
!!! TTTAGTTTTAGCTGGCTTGT+AGG - chr4_2:46365203-46365222 Msa0602590:CDS 35.0%
CATGAAACCAAATCCATTGA+TGG + chr4_2:46365317-46365336 None:intergenic 35.0%
! GATTTGTCTTTTCCTCATAC+TGG - chr4_2:46365833-46365852 Msa0602590:CDS 35.0%
! TTCCTCATACTGGTTGTATT+TGG - chr4_2:46365843-46365862 Msa0602590:CDS 35.0%
ATCCAAATACAACCAGTATG+AGG + chr4_2:46365848-46365867 None:intergenic 35.0%
GGTCTTAAAAAAGTCAGGAA+AGG - chr4_2:46365982-46366001 Msa0602590:CDS 35.0%
! TGTTTAGTAGGAGAGTTTTG+AGG - chr4_2:46366383-46366402 Msa0602590:intron 35.0%
! TTACTAGTTTGTGTGGTGTT+TGG - chr4_2:46366447-46366466 Msa0602590:intron 35.0%
! TACTAGTTTGTGTGGTGTTT+GGG - chr4_2:46366448-46366467 Msa0602590:intron 35.0%
AAAGGTTGAGTGAATATGAG+AGG - chr4_2:46366662-46366681 Msa0602590:intron 35.0%
TCTTTAGCAAACTTCCATGA+AGG - chr4_2:46366835-46366854 Msa0602590:intron 35.0%
AAAGATATGCAATCAGTCAG+TGG + chr4_2:46366867-46366886 None:intergenic 35.0%
TCTTCTTGCACCATTATTCA+GGG + chr4_2:46366926-46366945 None:intergenic 35.0%
ATCTTCTTGCACCATTATTC+AGG + chr4_2:46366927-46366946 None:intergenic 35.0%
GGACTACTCTAACTTTGATT+GGG + chr4_2:46366981-46367000 None:intergenic 35.0%
TCCTCTTTCCATGTTTCAAA+GGG + chr4_2:46367002-46367021 None:intergenic 35.0%
TTCCTCTTTCCATGTTTCAA+AGG + chr4_2:46367003-46367022 None:intergenic 35.0%
TATTCAAGTAGGACAAGAAG+TGG - chr4_2:46367045-46367064 Msa0602590:intron 35.0%
GACAAGAAAAATGAATGGAC+GGG - chr4_2:46367309-46367328 Msa0602590:intron 35.0%
ACAAGAAAAATGAATGGACG+GGG - chr4_2:46367310-46367329 Msa0602590:intron 35.0%
!! GACAAATCAGGAGTTGATAT+TGG + chr4_2:46367517-46367536 None:intergenic 35.0%
! AAGGTATCATCTACTCGTGT+TGG - chr4_2:46361236-46361255 Msa0602590:CDS 40.0%
TAAACATGAGCGAGTGAGTA+AGG - chr4_2:46361307-46361326 Msa0602590:CDS 40.0%
TTCTTATTATGGTGGCCTAG+AGG - chr4_2:46361482-46361501 Msa0602590:intron 40.0%
! CTCATATGCGTATGATAACG+TGG + chr4_2:46361537-46361556 None:intergenic 40.0%
ATGATGTGGCACAATACCAT+TGG + chr4_2:46361872-46361891 None:intergenic 40.0%
TCGCAGGAACAAAAGAAAGT+AGG + chr4_2:46362095-46362114 None:intergenic 40.0%
ACCGTCTTCGAAGAAGATTA+TGG - chr4_2:46362163-46362182 Msa0602590:intron 40.0%
ATCATCTGAGCCAATCATGT+TGG + chr4_2:46362513-46362532 None:intergenic 40.0%
! ATTCCTTCAAAGGGCTCTAA+GGG + chr4_2:46362587-46362606 None:intergenic 40.0%
CTAAATCAAGAACGGATGGT+AGG - chr4_2:46362693-46362712 Msa0602590:intron 40.0%
GTACATGATCAAACAAGGGT+AGG - chr4_2:46362797-46362816 Msa0602590:intron 40.0%
! GTGCTTGATGATTCTGGTAT+AGG - chr4_2:46362974-46362993 Msa0602590:intron 40.0%
ATTATCAACACCACCACTCT+CGG + chr4_2:46363029-46363048 None:intergenic 40.0%
!! AGTGGTGGTGTTGATAATGT+TGG - chr4_2:46363031-46363050 Msa0602590:intron 40.0%
! GGTTGATTCAAGGTCTAGAA+TGG - chr4_2:46363225-46363244 Msa0602590:intron 40.0%
!! TGAATGGAACAAAGGGCATT+AGG + chr4_2:46363309-46363328 None:intergenic 40.0%
ACTCCAGTGAATGGAACAAA+GGG + chr4_2:46363316-46363335 None:intergenic 40.0%
AACTCCAGTGAATGGAACAA+AGG + chr4_2:46363317-46363336 None:intergenic 40.0%
TTGTTTGGTTGCTACGTACT+TGG - chr4_2:46363401-46363420 Msa0602590:intron 40.0%
ACGTACTTGGTTAGAAGCAA+TGG - chr4_2:46363414-46363433 Msa0602590:intron 40.0%
ACTTGGTTAGAAGCAATGGA+TGG - chr4_2:46363418-46363437 Msa0602590:intron 40.0%
! AGTTGGAAAGGTTTTTCCAG+AGG - chr4_2:46363492-46363511 Msa0602590:intron 40.0%
CAATAATGATGATTCGCCTC+TGG + chr4_2:46363511-46363530 None:intergenic 40.0%
TCTACTCCATTAGAGCAAAG+TGG - chr4_2:46363713-46363732 Msa0602590:intron 40.0%
AGGAATCCACTTTGCTCTAA+TGG + chr4_2:46363722-46363741 None:intergenic 40.0%
! GTACGTCACAATTTTTGTGC+TGG - chr4_2:46363748-46363767 Msa0602590:CDS 40.0%
! TGTGTCACAAACTTGCTCAA+TGG + chr4_2:46363841-46363860 None:intergenic 40.0%
GGATATAAAGTGCGCAAAAG+TGG + chr4_2:46363934-46363953 None:intergenic 40.0%
! TTTGAAGCCTCTTCTTCCAT+AGG + chr4_2:46363955-46363974 None:intergenic 40.0%
CAAGATATTCCAGGATGAGT+TGG - chr4_2:46363996-46364015 Msa0602590:intron 40.0%
!! ATATTCCAGGATGAGTTGGT+TGG - chr4_2:46364000-46364019 Msa0602590:intron 40.0%
GCAATTGAAGACCTTGAAGA+AGG - chr4_2:46364297-46364316 Msa0602590:CDS 40.0%
TCTCTTGAACTATCTGAGAG+AGG - chr4_2:46364369-46364388 Msa0602590:CDS 40.0%
CCTTTCATTCGTAAAGTACG+TGG + chr4_2:46364585-46364604 None:intergenic 40.0%
CCACGTACTTTACGAATGAA+AGG - chr4_2:46364582-46364601 Msa0602590:CDS 40.0%
TGTAGTTATTGCCAGGGAAA+AGG - chr4_2:46364639-46364658 Msa0602590:CDS 40.0%
!! AGTTTTGTCGAACTCAAAGG+TGG - chr4_2:46365003-46365022 Msa0602590:CDS 40.0%
! CAGATTTTGGATATGGTGCT+AGG - chr4_2:46365047-46365066 Msa0602590:CDS 40.0%
! AGTGGTTCCATCAATGGATT+TGG - chr4_2:46365307-46365326 Msa0602590:CDS 40.0%
AAAAAGTTGCTGAGATGCGT+TGG - chr4_2:46365521-46365540 Msa0602590:CDS 40.0%
TGAGATGCGTTGGAATAACA+TGG - chr4_2:46365531-46365550 Msa0602590:CDS 40.0%
GATGCAAGTGCTCTCATATT+AGG - chr4_2:46365663-46365682 Msa0602590:CDS 40.0%
TGTTATGGCAAGGAATGGAT+AGG - chr4_2:46365709-46365728 Msa0602590:CDS 40.0%
GTTATGGCAAGGAATGGATA+GGG - chr4_2:46365710-46365729 Msa0602590:CDS 40.0%
!!! GAGCTGCCATTTTGTAACAA+AGG + chr4_2:46365784-46365803 None:intergenic 40.0%
! TGGCAGCTCTTGATTGTTTT+AGG - chr4_2:46365795-46365814 Msa0602590:CDS 40.0%
CTATATCTTGTACTCGGTTC+AGG - chr4_2:46365907-46365926 Msa0602590:CDS 40.0%
GGGAAAATGCATTAAATCGC+AGG + chr4_2:46365938-46365957 None:intergenic 40.0%
AACAGCACCAAAACAAGTCT+CGG + chr4_2:46366161-46366180 None:intergenic 40.0%
!!! GACTTGTTTTGGTGCTGTTT+CGG - chr4_2:46366162-46366181 Msa0602590:CDS 40.0%
!!! ACTTGTTTTGGTGCTGTTTC+GGG - chr4_2:46366163-46366182 Msa0602590:CDS 40.0%
ACAAATCCTTTAGCAGCGAA+TGG + chr4_2:46366296-46366315 None:intergenic 40.0%
TCGCTGCTAAAGGATTTGTA+AGG - chr4_2:46366297-46366316 Msa0602590:CDS 40.0%
CGCTGCTAAAGGATTTGTAA+GGG - chr4_2:46366298-46366317 Msa0602590:CDS 40.0%
GGAGTTTAACACGTATAGCT+CGG - chr4_2:46366419-46366438 Msa0602590:intron 40.0%
CACCACACAAACTAGTAATG+AGG + chr4_2:46366445-46366464 None:intergenic 40.0%
! ACTAGTTTGTGTGGTGTTTG+GGG - chr4_2:46366449-46366468 Msa0602590:intron 40.0%
GCTAAAGAAGAGAACACATG+CGG + chr4_2:46366823-46366842 None:intergenic 40.0%
GTCAGTGGAAATTACCTTCA+TGG + chr4_2:46366852-46366871 None:intergenic 40.0%
GGGACTACTCTAACTTTGAT+TGG + chr4_2:46366982-46367001 None:intergenic 40.0%
!! AGAGTAGTCCCTTTGAAACA+TGG - chr4_2:46366991-46367010 Msa0602590:intron 40.0%
!! TCCCTTTGAAACATGGAAAG+AGG - chr4_2:46366998-46367017 Msa0602590:intron 40.0%
CATGGAAAGAGGAATAAGAC+AGG - chr4_2:46367009-46367028 Msa0602590:intron 40.0%
! TCTTTAGGAGAACTACACTG+AGG - chr4_2:46367420-46367439 Msa0602590:CDS 40.0%
CATACTGATGCAATACTTGG+AGG + chr4_2:46367448-46367467 None:intergenic 40.0%
CTGCATACTGATGCAATACT+TGG + chr4_2:46367451-46367470 None:intergenic 40.0%
! GCAGTGTTCATGAAGACTTT+TGG - chr4_2:46367470-46367489 Msa0602590:CDS 40.0%
! GTGTTCATGAAGACTTTTGG+AGG - chr4_2:46367473-46367492 Msa0602590:CDS 40.0%
GTATCATCTACTCGTGTTGG+AGG - chr4_2:46361239-46361258 Msa0602590:CDS 45.0%
CAAGTTCACCATGACTGCAT+CGG - chr4_2:46361265-46361284 Msa0602590:CDS 45.0%
CGATCTAGATTCACCATGCA+TGG + chr4_2:46361333-46361352 None:intergenic 45.0%
TGGTGAATCTAGATCGTCTC+AGG - chr4_2:46361337-46361356 Msa0602590:intron 45.0%
AACATGCACAAGGACATGCT+CGG + chr4_2:46361378-46361397 None:intergenic 45.0%
TCAACATCCTCCTCATGTTG+GGG + chr4_2:46361426-46361445 None:intergenic 45.0%
CTCAACATCCTCCTCATGTT+GGG + chr4_2:46361427-46361446 None:intergenic 45.0%
TCTCAACATCCTCCTCATGT+TGG + chr4_2:46361428-46361447 None:intergenic 45.0%
TAAAGACTGGTGTGTCCTCT+AGG + chr4_2:46361500-46361519 None:intergenic 45.0%
GCACATTCACGACTAAAGAC+TGG + chr4_2:46361513-46361532 None:intergenic 45.0%
! TTCTTTTGTTCCTGCGAACG+AGG - chr4_2:46362098-46362117 Msa0602590:intron 45.0%
!! TTCCTTCAAAGGGCTCTAAG+GGG + chr4_2:46362586-46362605 None:intergenic 45.0%
CATTCCTTCAAAGGGCTCTA+AGG + chr4_2:46362588-46362607 None:intergenic 45.0%
! CTTAGAGCCCTTTGAAGGAA+TGG - chr4_2:46362586-46362605 Msa0602590:intron 45.0%
AATACTACACAAGGTACGCG+AGG - chr4_2:46362636-46362655 Msa0602590:intron 45.0%
ACAAGGTACGCGAGGAATAA+AGG - chr4_2:46362644-46362663 Msa0602590:intron 45.0%
AGAACGGATGGTAGGGTAAT+TGG - chr4_2:46362701-46362720 Msa0602590:intron 45.0%
TCAAACAAGGGTAGGATGCA+AGG - chr4_2:46362805-46362824 Msa0602590:intron 45.0%
TCAGTGTTATGTACCGAGAG+TGG - chr4_2:46363013-46363032 Msa0602590:intron 45.0%
GCATTTCAAATGGACGCAGA+AGG - chr4_2:46363181-46363200 Msa0602590:intron 45.0%
ATGCCCTTTGTTCCATTCAC+TGG - chr4_2:46363310-46363329 Msa0602590:intron 45.0%
CATACTTTCACTCCTTTGGG+TGG + chr4_2:46363782-46363801 None:intergenic 45.0%
TGCAATTCAAGCTTTGCGGA+AGG - chr4_2:46364419-46364438 Msa0602590:CDS 45.0%
GTTTGGTCATCGGAGACTTT+AGG + chr4_2:46364519-46364538 None:intergenic 45.0%
AAGTACGTGGACGACCTTTA+GGG + chr4_2:46364572-46364591 None:intergenic 45.0%
AAAGTACGTGGACGACCTTT+AGG + chr4_2:46364573-46364592 None:intergenic 45.0%
!!! GTTTGTTATGGCCTTTTCCC+TGG + chr4_2:46364653-46364672 None:intergenic 45.0%
GTCTGCAACAAACCAACATC+AGG + chr4_2:46364963-46364982 None:intergenic 45.0%
CTATCCTTTAGTGGCAAAGC+AGG + chr4_2:46364985-46365004 None:intergenic 45.0%
TTTGTCGAACTCAAAGGTGG+TGG - chr4_2:46365006-46365025 Msa0602590:CDS 45.0%
TTGTCGAACTCAAAGGTGGT+GGG - chr4_2:46365007-46365026 Msa0602590:CDS 45.0%
TACTTAGCACAGCTTGTCCT+TGG - chr4_2:46365280-46365299 Msa0602590:CDS 45.0%
TGATGGAACCACTTAGTCCA+AGG + chr4_2:46365300-46365319 None:intergenic 45.0%
GGACTAAGTGGTTCCATCAA+TGG - chr4_2:46365301-46365320 Msa0602590:CDS 45.0%
!! GAATTCTGCCTCTAAAGTCG+TGG + chr4_2:46365479-46365498 None:intergenic 45.0%
CAACGATTCTGCATTCTCCA+AGG + chr4_2:46365611-46365630 None:intergenic 45.0%
CTTGGAGAATGCAGAATCGT+TGG - chr4_2:46365609-46365628 Msa0602590:CDS 45.0%
TGCTCTCATATTAGGCGAGA+AGG - chr4_2:46365671-46365690 Msa0602590:CDS 45.0%
GCTCTCATATTAGGCGAGAA+GGG - chr4_2:46365672-46365691 Msa0602590:CDS 45.0%
TTGCCATAACATCAGCCACA+CGG + chr4_2:46365700-46365719 None:intergenic 45.0%
GCTGATGTTATGGCAAGGAA+TGG - chr4_2:46365704-46365723 Msa0602590:CDS 45.0%
CTAAATAGTTGGCCGACGAT+AGG - chr4_2:46366132-46366151 Msa0602590:CDS 45.0%
!! TAGGTGTCCGAGACTTGTTT+TGG - chr4_2:46366151-46366170 Msa0602590:CDS 45.0%
TTTGTGTTGAAGCTGCAGGA+AGG - chr4_2:46366234-46366253 Msa0602590:CDS 45.0%
AATGGCAGAAAATCAGCACC+AGG + chr4_2:46366278-46366297 None:intergenic 45.0%
TTTCTGCCATTCGCTGCTAA+AGG - chr4_2:46366287-46366306 Msa0602590:CDS 45.0%
ACCTCCTAATAAAGGTCCCA+GGG + chr4_2:46366350-46366369 None:intergenic 45.0%
AACCTCCTAATAAAGGTCCC+AGG + chr4_2:46366351-46366370 None:intergenic 45.0%
!!! TAGTAGGAGAGTTTTGAGGC+AGG - chr4_2:46366387-46366406 Msa0602590:intron 45.0%
!!! AGTAGGAGAGTTTTGAGGCA+GGG - chr4_2:46366388-46366407 Msa0602590:intron 45.0%
! GGCCTCATTACTAGTTTGTG+TGG - chr4_2:46366440-46366459 Msa0602590:intron 45.0%
AAAAGGATGCCGCGTATAGA+CGG + chr4_2:46366479-46366498 None:intergenic 45.0%
GTCCACAAGTCCCTGAATAA+TGG - chr4_2:46366913-46366932 Msa0602590:intron 45.0%
CACCATTATTCAGGGACTTG+TGG + chr4_2:46366918-46366937 None:intergenic 45.0%
TCGCTTAACCGATGCAGTCA+TGG + chr4_2:46361276-46361295 None:intergenic 50.0%
!! ACTGCATCGGTTAAGCGAGA+GGG - chr4_2:46361278-46361297 Msa0602590:CDS 50.0%
ACATGCACAAGGACATGCTC+GGG + chr4_2:46361377-46361396 None:intergenic 50.0%
CTTATGCGGGAACATGCACA+AGG + chr4_2:46361388-46361407 None:intergenic 50.0%
CTTCTTCGAAGACGGTTCTC+AGG + chr4_2:46362159-46362178 None:intergenic 50.0%
GTGTTATGTACCGAGAGTGG+TGG - chr4_2:46363016-46363035 Msa0602590:intron 50.0%
ACTTTCACTCCTTTGGGTGG+TGG + chr4_2:46363779-46363798 None:intergenic 50.0%
CTCGGTTTCTGCCTTCTTCA+AGG + chr4_2:46364311-46364330 None:intergenic 50.0%
CAGACCTGCTTTGCCACTAA+AGG - chr4_2:46364978-46364997 Msa0602590:CDS 50.0%
!! TCAAAGGTGGTGGGTTTCTC+TGG - chr4_2:46365016-46365035 Msa0602590:CDS 50.0%
CAGCTTGTCCTTGGACTAAG+TGG - chr4_2:46365289-46365308 Msa0602590:CDS 50.0%
CGGATATGCCACGACTTTAG+AGG - chr4_2:46365468-46365487 Msa0602590:CDS 50.0%
GAACCGTGTGGCTGATGTTA+TGG - chr4_2:46365694-46365713 Msa0602590:CDS 50.0%
GTGTGGCTGATGTTATGGCA+AGG - chr4_2:46365699-46365718 Msa0602590:CDS 50.0%
TGGCTATGCACTCATCTCAG+TGG - chr4_2:46365735-46365754 Msa0602590:CDS 50.0%
CTATGCACTCATCTCAGTGG+TGG - chr4_2:46365738-46365757 Msa0602590:CDS 50.0%
AAGTCTCGGACACCTATCGT+CGG + chr4_2:46366147-46366166 None:intergenic 50.0%
CAACACAAACAGCAGAGCAG+CGG + chr4_2:46366223-46366242 None:intergenic 50.0%
GCTGTTTGTGTTGAAGCTGC+AGG - chr4_2:46366230-46366249 Msa0602590:CDS 50.0%
!!! GTAGGAGAGTTTTGAGGCAG+GGG - chr4_2:46366389-46366408 Msa0602590:intron 50.0%
GCAAGACGCACTTAATCTCG+CGG + chr4_2:46366516-46366535 None:intergenic 50.0%
AGAGAACACATGCGGAGACA+GGG + chr4_2:46366815-46366834 None:intergenic 50.0%
AAGAGAACACATGCGGAGAC+AGG + chr4_2:46366816-46366835 None:intergenic 50.0%
CAGGGACTTGTGGACAAGTT+TGG + chr4_2:46366908-46366927 None:intergenic 50.0%
!! GACTGCATCGGTTAAGCGAG+AGG - chr4_2:46361277-46361296 Msa0602590:CDS 55.0%
!! CTGCATCGGTTAAGCGAGAG+GGG - chr4_2:46361279-46361298 Msa0602590:CDS 55.0%
CGAGTGAGTAAGGCCATGCA+TGG - chr4_2:46361317-46361336 Msa0602590:CDS 55.0%
CATGTTCCCGCATAAGCCCA+AGG - chr4_2:46361392-46361411 Msa0602590:intron 55.0%
TACGGTGCCTTGGGCTTATG+CGG + chr4_2:46361402-46361421 None:intergenic 55.0%
TCCTCCTCATGTTGGGGCTA+CGG + chr4_2:46361420-46361439 None:intergenic 55.0%
CGGTTCTCAGGTCGTAACAG+CGG + chr4_2:46362147-46362166 None:intergenic 55.0%
CTCCCCTTAGAGCCCTTTGA+AGG - chr4_2:46362581-46362600 Msa0602590:intron 55.0%
CTGGAATGTCCACCACCCAA+AGG - chr4_2:46363767-46363786 Msa0602590:CDS 55.0%
GGGATCCAACCAACTCATCC+TGG + chr4_2:46364008-46364027 None:intergenic 55.0%
! CCTTTAGGGACATCACGTGC+TGG + chr4_2:46364558-46364577 None:intergenic 55.0%
CCAGCACGTGATGTCCCTAA+AGG - chr4_2:46364555-46364574 Msa0602590:CDS 55.0%
! AGTCTGACTCGCTTGTGCCT+TGG - chr4_2:46365591-46365610 Msa0602590:CDS 55.0%
GGCAAGGAATGGATAGGGTC+TGG - chr4_2:46365715-46365734 Msa0602590:CDS 55.0%
!! TGTTTGTTGTGCTGCCCTCC+TGG - chr4_2:46366324-46366343 Msa0602590:intron 55.0%
CTAATAAAGGTCCCAGGGCC+AGG + chr4_2:46366345-46366364 None:intergenic 55.0%
CTGGCCCTGGGACCTTTATT+AGG - chr4_2:46366343-46366362 Msa0602590:intron 55.0%
GCCCTGGGACCTTTATTAGG+AGG - chr4_2:46366346-46366365 Msa0602590:intron 55.0%
!!! TTTTGAGGCAGGGGTATGCG+TGG - chr4_2:46366398-46366417 Msa0602590:intron 55.0%
! TGGGGTGTTCCGTCTATACG+CGG - chr4_2:46366467-46366486 Msa0602590:intron 55.0%
GACGCACTTAATCTCGCGGA+AGG + chr4_2:46366512-46366531 None:intergenic 55.0%
ACGGTGCCTTGGGCTTATGC+GGG + chr4_2:46361401-46361420 None:intergenic 60.0%
TGTTGGGGCTACGGTGCCTT+GGG + chr4_2:46361411-46361430 None:intergenic 60.0%
ATGTTGGGGCTACGGTGCCT+TGG + chr4_2:46361412-46361431 None:intergenic 60.0%
ACCGTAGCCCCAACATGAGG+AGG - chr4_2:46361416-46361435 Msa0602590:intron 60.0%
GTCGTGTTTGCCTCGTTCGC+AGG + chr4_2:46362111-46362130 None:intergenic 60.0%
!! GGCTCTAAGGGGAGCTCCAA+TGG + chr4_2:46362575-46362594 None:intergenic 60.0%
TAGGCGAGAAGGGAACCGTG+TGG - chr4_2:46365682-46365701 Msa0602590:CDS 60.0%
! GCTGTTTCGGGCTTCTGCTG+TGG - chr4_2:46366175-46366194 Msa0602590:CDS 60.0%
TAAAGGTCCCAGGGCCAGGA+GGG + chr4_2:46366341-46366360 None:intergenic 60.0%
ATAAAGGTCCCAGGGCCAGG+AGG + chr4_2:46366342-46366361 None:intergenic 60.0%
GGCACCGTAGCCCCAACATG+AGG - chr4_2:46361413-46361432 Msa0602590:intron 65.0%
TTCGGGCTTCTGCTGTGGCC+TGG - chr4_2:46366180-46366199 Msa0602590:CDS 65.0%
!! CTGCTGTGGCCTGGTGTTGC+AGG - chr4_2:46366189-46366208 Msa0602590:CDS 65.0%
!! GTGGCCTGGTGTTGCAGGTC+TGG - chr4_2:46366194-46366213 Msa0602590:CDS 65.0%
!! GCCTGGTGTTGCAGGTCTGG+TGG - chr4_2:46366197-46366216 Msa0602590:CDS 65.0%
GCCACCAGACCTGCAACACC+AGG + chr4_2:46366201-46366220 None:intergenic 65.0%
TTGTGCTGCCCTCCTGGCCC+TGG - chr4_2:46366330-46366349 Msa0602590:intron 70.0%
TGTGCTGCCCTCCTGGCCCT+GGG - chr4_2:46366331-46366350 Msa0602590:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 46361233 46367546 46361233 ID=Msa0602590;Name=Msa0602590
chr4_2 mRNA 46361233 46367546 46361233 ID=Msa0602590-mRNA-1;Parent=Msa0602590;Name=Msa0602590-mRNA-1;_AED=0.40;_eAED=0.15;_QI=0|0|0|0.4|1|1|5|0|897
chr4_2 exon 46367385 46367546 46367385 ID=Msa0602590-mRNA-1:exon:10518;Parent=Msa0602590-mRNA-1
chr4_2 exon 46364079 46366330 46364079 ID=Msa0602590-mRNA-1:exon:10517;Parent=Msa0602590-mRNA-1
chr4_2 exon 46363742 46363798 46363742 ID=Msa0602590-mRNA-1:exon:10516;Parent=Msa0602590-mRNA-1
chr4_2 exon 46362466 46362568 46362466 ID=Msa0602590-mRNA-1:exon:10515;Parent=Msa0602590-mRNA-1
chr4_2 exon 46361233 46361352 46361233 ID=Msa0602590-mRNA-1:exon:10514;Parent=Msa0602590-mRNA-1
chr4_2 CDS 46367385 46367546 46367385 ID=Msa0602590-mRNA-1:cds;Parent=Msa0602590-mRNA-1
chr4_2 CDS 46364079 46366330 46364079 ID=Msa0602590-mRNA-1:cds;Parent=Msa0602590-mRNA-1
chr4_2 CDS 46363742 46363798 46363742 ID=Msa0602590-mRNA-1:cds;Parent=Msa0602590-mRNA-1
chr4_2 CDS 46362466 46362568 46362466 ID=Msa0602590-mRNA-1:cds;Parent=Msa0602590-mRNA-1
chr4_2 CDS 46361233 46361352 46361233 ID=Msa0602590-mRNA-1:cds;Parent=Msa0602590-mRNA-1
Gene Sequence

>Msa0602590

ATGAAGGTATCATCTACTCGTGTTGGAGGCAACAAGTTCACCATGACTGCATCGGTTAAGCGAGAGGGGTCAATTAAACATGAGCGAGTGAGTAAGGCCATGCATGGTGAATCTAGATCGTCTCAGGTTGCAGAGCTTGATCCCGAGCATGTCCTTGTGCATCATAACAGGATTGTGAGTGCTACAATGACAGATCAAGAAATGACAGATATGCATGAACATACCAACATGATTGGCTCAGATGATATGCTTGCAAGTGATGCAGATCCTCTCAATGATAGACTACCATTGGAGCTCCCCTTAGAGCCCTTTGAAGGAATGGAGTTTACATCAATTGAAGATGTAAAAAAATACTACACAAGGTACGCGAGGAATAAAGGTTTTAGCTTTCGTATGGGTCGTGTTACTAAATCAAGAACGGATGGTAGGGTAATTGGTCAAGAGATTCTTTGTTCAAAGGAGGGGTTTAGATCCCAAAAAAATTTGAAAAAAGAAAATGGTAGTCTTATAGTACATGATCAAACAAGGGTAGGATGCAAGGCACTCTTGTATATCAAGAAAAGTGAAGATAGGTGGACTGTTTCTAGATTTGTAAGAGATCATAATCATGTACTATTTTCCCCAAAAAGTTCACAGTTTCTTAGAGTACATAGAAGCAAAACCAAAGTGCAAAAAAAACTTATTGATGTGCTTGATGATTCTGGTATAGGCCCTAGTAAAATAGCATCAGTGTTATGTACCGAGAGTGGTGGTGTTGATAATGTTGGATTTAGCCAACAAGATGTTATTAATTATTTAACTGTGAAGAGACAAAAACAATTAGAAAATGGAGATGCTCAGTTGATGTTATCGTACTTTAAGAATTGTCAGTTGAAGAATCCTGGGTTTTTCTATGCATTTCAAATGGACGCAGAAGGTAAATTAGCAAATTGCTTTTGGGTTGATTCAAGGTCTAGAATGGCTTACAAATATTTTGGTGATGTGGTGACTTTTGATCCAACATACTTAACAAATAAATACCTAATGCCCTTTGTTCCATTCACTGGAGTTAATCATCACCAACAGTCTATACTTTTTGGTTGTGCTCTGTTATGGGATGAAACTGAAGAGAGTTTTGTTTGGTTGCTACGTACTTGGTTAGAAGCAATGGATGGAGTTAGTCCTAAAACTATTATCACTGATCAAGACACTTCTATTTCTAATGCAGTTGGAAAGGTTTTTCCAGAGGCGAATCATCATTATTGTATGTGGCATATTGAGAAGAAAGTTCCAGAGTACTTGAACCAAATCTATCATGAACATAGTGAGTTTAAAAATCAATTTCACAAGTGCATTCACCAAACTATCACTACTGATGACTTTGATTCTGATTGGGGAGCAATGATAGATAAGTACGAGTTGCAAGATAACAAATGGCTAAAGAAGATCTACTCCATTAGAGCAAAGTGGATTCCTTCTTATGTACGTCACAATTTTTGTGCTGGAATGTCCACCACCCAAAGGAGTGAAAGTATGAATAAATTTTTTAAGGGCTTTTTGAATTCAAGTACTCCATTGAGCAAGTTTGTGACACAATATGAGAAGGCTCTTGATGCACGTTATAACAAGGAAAGAGAGAAGAATGTTAAAACAAGGAATTCAAAACCACTTTTGCGCACTTTATATCCTATGGAAGAAGAGGCTTCAAAAATTTATACACGAAAAGTGTTCAAGATATTCCAGGATGAGTTGGTTGGATCCCAAATATTTATCGCAGAGAAAGTTGAATTTTCTGTTGAAGTTTCCACATACAAGATCCATGAAATTTACAAAGAGAAACCTAACTATCATGTGACTTTTCATGACATTTCAAAAGAAGCAAAATGTAGTTGTCACATGTTTGAATTTGTGGGTATTCTTTGTAGACATGTGTTGAATGTATTCATCAAGGAAAATGTTTATTCTCTCCCTTCTCAATATGTTCTAAGTCGATGGACCATAAATGCTAAGAAAGACAAAAGTAAAGGACTTGCAATTGAAGACCTTGAAGAAGGCAGAAACCGAGCTTCAAGTACTTCATTGTTTAATAGTATTATGGTTGAGTCTCTTGAACTATCTGAGAGAGGTTCACGATCGCAAAAACATCATGATATTGCAATTCAAGCTTTGCGGAAGGCAATCACAAAACTTGATCAATTGGATATTGAAGAGCCAAATGAAGAGTTTGTTAATTCAACGTTTGAAGTTATGCCTAAAGTCTCCGATGACCAAACCATAAATTTGTGTGATCCAGCACGTGATGTCCCTAAAGGTCGTCCACGTACTTTACGAATGAAAGGCAGTTTGGAATTGCTCAAAAAAGGTTCAATGAAGTGTAGTTATTGCCAGGGAAAAGGCCATAACAAACGTAGTTGTCCAAGTTTAAAACATGGAAGACCTGCTTTGCCACTAAAGGATAGTTTTGTCGAACTCAAAGGTGGTGGGTTTCTCTGGTCTGGTGGCCGCTGCTCTGCTGTTTGTGTTGAAGCTGCAGGAAGGTTGTTTTTTAATCTGAAGCCTGGTGCTGATTTTCTGCCATTCGCTGCTAAAGGATTTGAGAACTACACTGAGGTACCTCCAAGTATTGCATCAGTATGCAGCAGTGTTCATGAAGACTTTTGGAGGCCAACTGAATATTTAATTCCAATATCAACTCCTGATTTGTCCTCGAGATGA
Protein sequence

>Msa0602590

MKVSSTRVGGNKFTMTASVKREGSIKHERVSKAMHGESRSSQVAELDPEHVLVHHNRIVSATMTDQEMTDMHEHTNMIGSDDMLASDADPLNDRLPLELPLEPFEGMEFTSIEDVKKYYTRYARNKGFSFRMGRVTKSRTDGRVIGQEILCSKEGFRSQKNLKKENGSLIVHDQTRVGCKALLYIKKSEDRWTVSRFVRDHNHVLFSPKSSQFLRVHRSKTKVQKKLIDVLDDSGIGPSKIASVLCTESGGVDNVGFSQQDVINYLTVKRQKQLENGDAQLMLSYFKNCQLKNPGFFYAFQMDAEGKLANCFWVDSRSRMAYKYFGDVVTFDPTYLTNKYLMPFVPFTGVNHHQQSILFGCALLWDETEESFVWLLRTWLEAMDGVSPKTIITDQDTSISNAVGKVFPEANHHYCMWHIEKKVPEYLNQIYHEHSEFKNQFHKCIHQTITTDDFDSDWGAMIDKYELQDNKWLKKIYSIRAKWIPSYVRHNFCAGMSTTQRSESMNKFFKGFLNSSTPLSKFVTQYEKALDARYNKEREKNVKTRNSKPLLRTLYPMEEEASKIYTRKVFKIFQDELVGSQIFIAEKVEFSVEVSTYKIHEIYKEKPNYHVTFHDISKEAKCSCHMFEFVGILCRHVLNVFIKENVYSLPSQYVLSRWTINAKKDKSKGLAIEDLEEGRNRASSTSLFNSIMVESLELSERGSRSQKHHDIAIQALRKAITKLDQLDIEEPNEEFVNSTFEVMPKVSDDQTINLCDPARDVPKGRPRTLRMKGSLELLKKGSMKCSYCQGKGHNKRSCPSLKHGRPALPLKDSFVELKGGGFLWSGGRCSAVCVEAAGRLFFNLKPGADFLPFAAKGFENYTEVPPSIASVCSSVHEDFWRPTEYLIPISTPDLSSR*