AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0609070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0609070 MtrunA17_Chr4g0041381 96.970 165 5 0 19 183 1 165 1.17e-110 336
Msa0609070 MtrunA17_Chr1g0209251 58.788 165 61 1 19 183 1 158 5.67e-65 215
Msa0609070 MtrunA17_Chr8g0391971 53.529 170 67 4 19 183 1 163 5.85e-53 182
Msa0609070 MtrunA17_Chr1g0161531 55.556 171 62 6 19 183 1 163 5.03e-51 176
Msa0609070 MtrunA17_Chr8g0364961 58.209 134 50 1 50 183 25 152 1.10e-45 161
Msa0609070 MtrunA17_Chr3g0116901 51.818 110 50 2 85 194 39 145 4.34e-34 119
Msa0609070 MtrunA17_Chr3g0107401 50.459 109 51 2 86 194 1 106 3.16e-30 117
Msa0609070 MtrunA17_Chr4g0073041 50.495 101 47 2 85 183 57 156 2.07e-27 109
Msa0609070 MtrunA17_Chr3g0117891 59.211 76 30 1 108 183 3 77 4.56e-25 102
Msa0609070 MtrunA17_Chr3g0107431 47.475 99 37 2 85 183 11 94 5.37e-23 89.4
Msa0609070 MtrunA17_Chr2g0314621 34.653 101 59 5 85 183 124 219 5.07e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0609070 AT1G06410.3 73.939 165 34 2 19 183 1 156 1.25e-69 228
Msa0609070 AT1G06410.1 73.939 165 34 2 19 183 1 156 1.25e-69 228
Msa0609070 AT1G06410.2 73.939 165 34 2 19 183 1 156 1.25e-69 228
Msa0609070 AT4G17770.1 57.831 166 61 3 19 183 1 158 1.30e-58 198
Msa0609070 AT4G17770.2 57.831 166 61 3 19 183 1 158 1.30e-58 198
Msa0609070 AT1G68020.1 50.279 179 62 4 19 183 1 166 5.52e-49 170
Msa0609070 AT1G68020.2 50.279 179 62 4 19 183 1 166 1.43e-48 170
Msa0609070 AT1G68020.3 50.279 179 62 4 19 183 1 166 1.43e-48 170
Msa0609070 AT1G23870.1 51.786 168 68 2 19 183 1 158 1.49e-44 158
Msa0609070 AT1G70290.1 51.190 168 67 3 19 183 1 156 1.89e-44 158
Msa0609070 AT1G70290.2 51.190 168 67 3 19 183 1 156 2.46e-44 158
Msa0609070 AT1G60140.3 51.515 165 73 1 19 183 1 158 3.71e-44 157
Msa0609070 AT1G60140.6 51.515 165 73 1 19 183 1 158 4.47e-44 157
Msa0609070 AT1G60140.1 51.515 165 73 1 19 183 1 158 4.47e-44 157
Msa0609070 AT1G60140.2 51.515 165 73 1 19 183 1 158 4.47e-44 157
Msa0609070 AT1G60140.5 51.515 165 73 1 19 183 1 158 4.47e-44 157
Msa0609070 AT1G60140.4 51.515 165 73 1 19 183 1 158 4.47e-44 157
Msa0609070 AT2G18700.1 53.043 115 51 1 72 183 35 149 2.00e-36 135

Find 173 sgRNAs with CRISPR-Local

Find 414 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCGGAGGATGATTATATT+TGG 0.168883 4_2:+56427006 Msa0609070:three_prime_UTR
AGGTATAAATTTGAAGATTC+TGG 0.215594 4_2:+56427460 Msa0609070:three_prime_UTR
CAAAGAGGTCATATCTCTTT+TGG 0.226862 4_2:+56428251 Msa0609070:three_prime_UTR
TTTGCTTGGACTCTTATTAA+TGG 0.243265 4_2:-56428232 None:intergenic
CCCGACCCCGATCCCATTGC+TGG 0.248765 4_2:-56426451 None:intergenic
ATTACAAGCATGCTCTTCTT+TGG 0.251977 4_2:-56427824 None:intergenic
TTTGCTTGGTATTGACGATA+TGG 0.281634 4_2:+56427427 Msa0609070:three_prime_UTR
TTCGCATTGGAACTTGATTC+AGG 0.291144 4_2:-56427797 None:intergenic
ACAGCTCTTCCTTGCCATTT+GGG 0.295677 4_2:-56427509 None:intergenic
TCCCAGAAGCCAAATCTAAA+AGG 0.296805 4_2:-56426423 None:intergenic
CCAGCAATGGGATCGGGGTC+GGG 0.301443 4_2:+56426451 Msa0609070:CDS
CAGCAATGGGATCGGGGTCG+GGG 0.303867 4_2:+56426452 Msa0609070:CDS
GACGAGCATAATCGAAAGTA+TGG 0.320887 4_2:-56427199 None:intergenic
CTCTAGCAGGGTTAACTATC+TGG 0.321636 4_2:-56427538 None:intergenic
TTCTTTGCTATTACAGCTTA+AGG 0.321784 4_2:+56426684 Msa0609070:CDS
GCTTCTGCAAAAGGCAATTA+TGG 0.326836 4_2:+56426863 Msa0609070:CDS
AACAGCTCTTCCTTGCCATT+TGG 0.326987 4_2:-56427510 None:intergenic
TTGTAATATCAGAATTTATT+GGG 0.327538 4_2:+56427840 Msa0609070:three_prime_UTR
TTTAGTATCTCCTCCCTAAC+AGG 0.334244 4_2:-56427146 None:intergenic
CAATATATTCATAAGGAGTT+AGG 0.335793 4_2:-56427751 None:intergenic
CTTGTAATATCAGAATTTAT+TGG 0.336765 4_2:+56427839 Msa0609070:three_prime_UTR
TTACTAAATTCTGATATCAT+TGG 0.338425 4_2:+56427173 Msa0609070:three_prime_UTR
TATCTAGGATTGGAATATTA+CGG 0.338808 4_2:+56427278 Msa0609070:three_prime_UTR
CCCGGAGGATGATTATATTT+GGG 0.339590 4_2:+56427007 Msa0609070:three_prime_UTR
TATATAGGACTCTTCCTGTT+AGG 0.344777 4_2:+56427132 Msa0609070:three_prime_UTR
GCACTCATGACGTGGCTTAC+TGG 0.351395 4_2:+56427999 Msa0609070:three_prime_UTR
ACACTCAGCAAGGCTGTAAT+AGG 0.352058 4_2:-56427696 None:intergenic
TTACAAGCATGCTCTTCTTT+GGG 0.358274 4_2:-56427823 None:intergenic
GTTTGTAGACAGGGAATATC+TGG 0.365870 4_2:+56427773 Msa0609070:three_prime_UTR
CTCTCCATCACTCATTGAAA+TGG 0.371727 4_2:-56427939 None:intergenic
GGATGGATTTCCAGAAGATA+TGG 0.376566 4_2:+56426705 Msa0609070:CDS
TCCTGCTGCAGTCGTATGTT+GGG 0.381549 4_2:+56427230 Msa0609070:three_prime_UTR
GGTTCATGATTACCATTTGA+TGG 0.383452 4_2:+56427028 Msa0609070:three_prime_UTR
TACAGAACCTCCATATCTTC+TGG 0.384072 4_2:-56426715 None:intergenic
AATTTCCCAGCAATGGGATC+GGG 0.387783 4_2:+56426445 Msa0609070:CDS
TTCCATCATCGGAGATATAT+AGG 0.388493 4_2:+56427117 Msa0609070:three_prime_UTR
ATCTAGGATTGGAATATTAC+GGG 0.399527 4_2:+56427279 Msa0609070:three_prime_UTR
ACCATCATAGTCCAACAAAA+TGG 0.400346 4_2:-56428190 None:intergenic
TGAATATATTGTTTGTAGAC+AGG 0.403035 4_2:+56427763 Msa0609070:three_prime_UTR
CAATGGGATCGGGGTCGGGG+AGG 0.407950 4_2:+56426455 Msa0609070:CDS
TTCCTGCTGCAGTCGTATGT+TGG 0.414477 4_2:+56427229 Msa0609070:three_prime_UTR
AGCAGGATCAACAGAGTGTT+TGG 0.419750 4_2:+56427611 Msa0609070:three_prime_UTR
CTTCTTTGGGCTATTCGCAT+TGG 0.422173 4_2:-56427810 None:intergenic
ATCGTCAATACCAAGCAAAA+TGG 0.428223 4_2:-56427423 None:intergenic
TAAAAGTTTGCCAAAACATC+AGG 0.429012 4_2:-56426835 None:intergenic
TTTATGATGGCTTCTGCAAA+AGG 0.429950 4_2:+56426854 Msa0609070:CDS
CTCAGAGGTGGATGATGATC+AGG 0.430895 4_2:+56426531 Msa0609070:CDS
AAACGCCTTCTTAGAAAAGT+TGG 0.435169 4_2:-56427056 None:intergenic
TTCTGGGAATTTCCCAGCAA+TGG 0.440101 4_2:+56426438 Msa0609070:CDS
GGTGTTCTCCATCGCTTAGT+GGG 0.441085 4_2:+56427861 Msa0609070:three_prime_UTR
TGGGGAATAGGTCTTAGCTT+TGG 0.442950 4_2:+56428082 Msa0609070:three_prime_UTR
AAAGCTCTCAATTGATGCTA+TGG 0.443351 4_2:+56428137 Msa0609070:three_prime_UTR
GTTAACCCTGCTAGAGGTAA+AGG 0.443791 4_2:+56427545 Msa0609070:three_prime_UTR
GGGTGTTCTCCATCGCTTAG+TGG 0.443816 4_2:+56427860 Msa0609070:three_prime_UTR
GATCTGTCAATAAACACAAT+AGG 0.448371 4_2:-56427650 None:intergenic
TGATGTATCACAGTATTTGC+TGG 0.449009 4_2:+56426780 Msa0609070:CDS
TGTATCCCTTTACCTCTAGC+AGG 0.449011 4_2:-56427551 None:intergenic
TGCGGCATGAAAAGCATTAT+CGG 0.451086 4_2:+56427969 Msa0609070:three_prime_UTR
GTGTTATTGTCACAGCTGTA+AGG 0.453106 4_2:+56427717 Msa0609070:three_prime_UTR
GTATTAAGATCATGCCTGTT+GGG 0.456048 4_2:+56427312 Msa0609070:three_prime_UTR
GAACATAGGCTTCCCACAAA+TGG 0.459768 4_2:-56426941 None:intergenic
CCCAGCAATGGGATCGGGGT+CGG 0.460165 4_2:+56426450 Msa0609070:CDS
TCTGGGAATTTCCCAGCAAT+GGG 0.460266 4_2:+56426439 Msa0609070:CDS
TCAGGCAGTAAGTGTTTCTT+CGG 0.462017 4_2:+56426549 Msa0609070:CDS
TGCTGAAACAACACCCCAAA+TGG 0.466478 4_2:+56427495 Msa0609070:three_prime_UTR
TAAAAGGTTTGTATACGATC+TGG 0.467408 4_2:-56426407 None:intergenic
AAATTTGAAGATTCTGGCTA+TGG 0.469132 4_2:+56427466 Msa0609070:three_prime_UTR
CAGTCAAAGAGGGGTTATCT+AGG 0.470100 4_2:+56427263 Msa0609070:three_prime_UTR
GCAGTTGCTTCAACATTCCA+TGG 0.470653 4_2:-56427899 None:intergenic
AATGGGATCGGGGTCGGGGA+GGG 0.477370 4_2:+56426456 Msa0609070:CDS
ACCGCTTTGATCGCCATTTG+TGG 0.477691 4_2:+56426928 Msa0609070:CDS
ACCCAAATATAATCATCCTC+CGG 0.481751 4_2:-56427008 None:intergenic
CGATCAGAAGAAATAGTTGA+CGG 0.482348 4_2:-56426577 None:intergenic
ATATAGGACTCTTCCTGTTA+GGG 0.485478 4_2:+56427133 Msa0609070:three_prime_UTR
CAGCTTGTTTGCCAGAACAT+AGG 0.487233 4_2:-56426955 None:intergenic
CCGAGGGTTATGAGTGTCCC+GGG 0.488412 4_2:+56426502 Msa0609070:CDS
TATATCTCCGATGATGGAAA+GGG 0.489420 4_2:-56427113 None:intergenic
CGACCCATGTGAATCCCAAC+AGG 0.490514 4_2:-56427326 None:intergenic
ACCCAACATACGACTGCAGC+AGG 0.490840 4_2:-56427231 None:intergenic
CCGCTTTGATCGCCATTTGT+GGG 0.494408 4_2:+56426929 Msa0609070:CDS
GTCCTATATATCTCCGATGA+TGG 0.496938 4_2:-56427119 None:intergenic
GCCGAGGGTTATGAGTGTCC+CGG 0.498721 4_2:+56426501 Msa0609070:CDS
AACTTTCTTCTATTTCAGAA+TGG 0.500344 4_2:-56427586 None:intergenic
TTTGTGGGAAGCCTATGTTC+TGG 0.500908 4_2:+56426944 Msa0609070:CDS
CTACAAACAATATATTCATA+AGG 0.502334 4_2:-56427758 None:intergenic
GATATGGAGGTTCTGTATGT+TGG 0.504909 4_2:+56426721 Msa0609070:CDS
TCCACCTCTGAGACAATCCC+CGG 0.508028 4_2:-56426520 None:intergenic
CCCAAATATAATCATCCTCC+GGG 0.508556 4_2:-56427007 None:intergenic
GCATAGCCCCTTTCCATCAT+CGG 0.508587 4_2:+56427106 Msa0609070:three_prime_UTR
AAAGAGGGGTTATCTAGGAT+TGG 0.508611 4_2:+56427268 Msa0609070:three_prime_UTR
GAATTTCCCAGCAATGGGAT+CGG 0.509309 4_2:+56426444 Msa0609070:CDS
GATGTCGGATGAGGAGTGTA+AGG 0.511899 4_2:+56427367 Msa0609070:three_prime_UTR
CGGTAACTTGTAATGAAAAG+TGG 0.513649 4_2:-56426886 None:intergenic
AACAGAGTGTTTGGACGACC+TGG 0.514305 4_2:+56427620 Msa0609070:three_prime_UTR
GAGCTCAAACAGCAATTTGA+AGG 0.515176 4_2:+56427395 Msa0609070:three_prime_UTR
CAGCTCTTCCTTGCCATTTG+GGG 0.515782 4_2:-56427508 None:intergenic
TTAACCCTGCTAGAGGTAAA+GGG 0.516128 4_2:+56427546 Msa0609070:three_prime_UTR
AAGAACGAAGGCGGATGCCG+AGG 0.520114 4_2:+56426485 Msa0609070:CDS
AGACATGGAGAGGGCTTGCA+CGG 0.522594 4_2:+56428039 Msa0609070:three_prime_UTR
ATATATCTCCGATGATGGAA+AGG 0.524519 4_2:-56427114 None:intergenic
AGAGATATGACCTCTTTGCT+TGG 0.525145 4_2:-56428246 None:intergenic
TTACAAGAGGGCAAAGAGTA+GGG 0.528130 4_2:+56428167 Msa0609070:three_prime_UTR
TATTGTGTTTATTGACAGAT+CGG 0.528425 4_2:+56427652 Msa0609070:three_prime_UTR
CTGTTGGGATTCACATGGGT+CGG 0.529805 4_2:+56427327 Msa0609070:three_prime_UTR
TTGCTATTACAGCTTAAGGA+TGG 0.530659 4_2:+56426688 Msa0609070:CDS
AGAACGAAGGCGGATGCCGA+GGG 0.530953 4_2:+56426486 Msa0609070:CDS
TAGCTTTGGATTTAGAGTTG+TGG 0.534487 4_2:+56428096 Msa0609070:three_prime_UTR
CTTACAAGAGGGCAAAGAGT+AGG 0.537232 4_2:+56428166 Msa0609070:three_prime_UTR
GATACATCATCTTGTTCAGC+GGG 0.537461 4_2:-56426766 None:intergenic
ACATCAGGAGGCAGAAAAGT+GGG 0.540834 4_2:-56426820 None:intergenic
GGGCTATCCGTGTCAATCCA+TGG 0.541240 4_2:+56427882 Msa0609070:three_prime_UTR
ACGTAGTTTCTTGCAAGACA+TGG 0.542110 4_2:+56428024 Msa0609070:three_prime_UTR
AAGTTGGCAGCACCATCAAA+TGG 0.542653 4_2:-56427040 None:intergenic
GAATATATTGTTTGTAGACA+GGG 0.549934 4_2:+56427764 Msa0609070:three_prime_UTR
TGTTATGAGGATGTCGGATG+AGG 0.553523 4_2:+56427358 Msa0609070:three_prime_UTR
AGTATTAAGATCATGCCTGT+TGG 0.555153 4_2:+56427311 Msa0609070:three_prime_UTR
AAATAGAAGAAAGTTGCAGC+AGG 0.559745 4_2:+56427594 Msa0609070:three_prime_UTR
CCGACCCCGATCCCATTGCT+GGG 0.564119 4_2:-56426450 None:intergenic
AAACAAGCTGTTCTTTCAGA+AGG 0.565229 4_2:+56426968 Msa0609070:CDS
CCCGGGACACTCATAACCCT+CGG 0.570549 4_2:-56426502 None:intergenic
ATTGTCACAGCTGTAAGGGA+TGG 0.572045 4_2:+56427722 Msa0609070:three_prime_UTR
AACATCAGGAGGCAGAAAAG+TGG 0.573267 4_2:-56426821 None:intergenic
GAAGCCATTTCAATGAGTGA+TGG 0.574264 4_2:+56427935 Msa0609070:three_prime_UTR
TTGTCACAGCTGTAAGGGAT+GGG 0.578214 4_2:+56427723 Msa0609070:three_prime_UTR
CCCGGGGATTGTCTCAGAGG+TGG 0.578255 4_2:+56426519 Msa0609070:CDS
TCTAGAGTATCAGTCAAAGA+GGG 0.581200 4_2:+56427253 Msa0609070:three_prime_UTR
CATGCCTGTTGGGATTCACA+TGG 0.583402 4_2:+56427322 Msa0609070:three_prime_UTR
GTCGGATTGAATCTGTTATG+AGG 0.584194 4_2:+56427345 Msa0609070:three_prime_UTR
CTATGGTTTCAGCTTACAAG+AGG 0.596832 4_2:+56428154 Msa0609070:three_prime_UTR
AGAAAAGAGAGGACAACAAA+GGG 0.596911 4_2:+56426638 Msa0609070:CDS
AAGAAAAGAGAGGACAACAA+AGG 0.597247 4_2:+56426637 Msa0609070:CDS
GTCTAGAGTATCAGTCAAAG+AGG 0.599688 4_2:+56427252 Msa0609070:three_prime_UTR
ATTTCCCAGCAATGGGATCG+GGG 0.601478 4_2:+56426446 Msa0609070:CDS
CAACATTCCATGGATTGACA+CGG 0.605906 4_2:-56427889 None:intergenic
CGGATAGCCCCACTAAGCGA+TGG 0.610821 4_2:-56427869 None:intergenic
TAATAAGAGTCCAAGCAAAG+AGG 0.616472 4_2:+56428236 Msa0609070:three_prime_UTR
TGTCCCGGGGATTGTCTCAG+AGG 0.616643 4_2:+56426516 Msa0609070:CDS
GTATCCCTTTACCTCTAGCA+GGG 0.618579 4_2:-56427550 None:intergenic
TGACAATAACACACTCAGCA+AGG 0.622584 4_2:-56427706 None:intergenic
GGATGAGGAGTGTAAGGCAA+GGG 0.623073 4_2:+56427373 Msa0609070:three_prime_UTR
CAGATAGTTAACCCTGCTAG+AGG 0.623112 4_2:+56427539 Msa0609070:three_prime_UTR
AAACAACACCCCAAATGGCA+AGG 0.628534 4_2:+56427500 Msa0609070:three_prime_UTR
TTTCTTGCAAGACATGGAGA+GGG 0.628667 4_2:+56428030 Msa0609070:three_prime_UTR
GTGATGGAGAGAAGCAGTTG+CGG 0.631761 4_2:+56427951 Msa0609070:three_prime_UTR
GTGTTCTCCATCGCTTAGTG+GGG 0.632837 4_2:+56427862 Msa0609070:three_prime_UTR
GTATGTCAGCACTCATGACG+TGG 0.632870 4_2:+56427991 Msa0609070:three_prime_UTR
TGGATTTCCAGAAGATATGG+AGG 0.636676 4_2:+56426708 Msa0609070:CDS
TAGGACTCTTCCTGTTAGGG+AGG 0.637903 4_2:+56427136 Msa0609070:three_prime_UTR
AAAGAGAGGACAACAAAGGG+TGG 0.638553 4_2:+56426641 Msa0609070:CDS
CGGATGAGGAGTGTAAGGCA+AGG 0.638820 4_2:+56427372 Msa0609070:three_prime_UTR
TTTGAAAGCTAAGAAAAGAG+AGG 0.639677 4_2:+56426627 Msa0609070:CDS
GTTTCTTGCAAGACATGGAG+AGG 0.640852 4_2:+56428029 Msa0609070:three_prime_UTR
AAGTTTGCCAAAACATCAGG+AGG 0.642149 4_2:-56426832 None:intergenic
ATGCCTGTTGGGATTCACAT+GGG 0.644963 4_2:+56427323 Msa0609070:three_prime_UTR
GGTAGTTGAAATAATAAACC+CGG 0.646249 4_2:+56426989 Msa0609070:exon
AACACAATAGGTTCATAACC+AGG 0.652850 4_2:-56427638 None:intergenic
CATCAGGAGGCAGAAAAGTG+GGG 0.652893 4_2:-56426819 None:intergenic
GAATGTTGAAGCAACTGCGG+AGG 0.653258 4_2:+56427904 Msa0609070:three_prime_UTR
TGATACATCATCTTGTTCAG+CGG 0.658366 4_2:-56426767 None:intergenic
ATATCTCCGATGATGGAAAG+GGG 0.659124 4_2:-56427112 None:intergenic
CCACCTCTGAGACAATCCCC+GGG 0.659546 4_2:-56426519 None:intergenic
TGTTATTGTCACAGCTGTAA+GGG 0.659939 4_2:+56427718 Msa0609070:three_prime_UTR
TGAATCTGTTATGAGGATGT+CGG 0.662042 4_2:+56427352 Msa0609070:three_prime_UTR
ACAAATGGCGATCAAAGCGG+TGG 0.668272 4_2:-56426926 None:intergenic
TATGGTTTCAGCTTACAAGA+GGG 0.681078 4_2:+56428155 Msa0609070:three_prime_UTR
GGAGGGAGTTTAAAGAACGA+AGG 0.685276 4_2:+56426473 Msa0609070:CDS
CTAGAGTATCAGTCAAAGAG+GGG 0.688713 4_2:+56427254 Msa0609070:three_prime_UTR
ATGGAATGTTGAAGCAACTG+CGG 0.690516 4_2:+56427901 Msa0609070:three_prime_UTR
TAGGATTGGAATATTACGGG+AGG 0.692571 4_2:+56427282 Msa0609070:three_prime_UTR
CGAGGGTTATGAGTGTCCCG+GGG 0.699920 4_2:+56426503 Msa0609070:CDS
GGGAGTTTAAAGAACGAAGG+CGG 0.701696 4_2:+56426476 Msa0609070:CDS
CCCACAAATGGCGATCAAAG+CGG 0.706904 4_2:-56426929 None:intergenic
AGTTGAAATAATAAACCCGG+AGG 0.724497 4_2:+56426992 Msa0609070:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGTAATATCAGAATTTATT+GGG + chr4_2:56427840-56427859 Msa0609070:three_prime_UTR 15.0%
!! TTGTAATATCAGAATTTATT+GGG + chr4_2:56427840-56427859 Msa0609070:three_prime_UTR 15.0%
!! TTACTAAATTCTGATATCAT+TGG + chr4_2:56427173-56427192 Msa0609070:three_prime_UTR 20.0%
!! CTACAAACAATATATTCATA+AGG - chr4_2:56427761-56427780 None:intergenic 20.0%
!! CTTGTAATATCAGAATTTAT+TGG + chr4_2:56427839-56427858 Msa0609070:three_prime_UTR 20.0%
!! TTACTAAATTCTGATATCAT+TGG + chr4_2:56427173-56427192 Msa0609070:three_prime_UTR 20.0%
!! CTACAAACAATATATTCATA+AGG - chr4_2:56427761-56427780 None:intergenic 20.0%
!! CTTGTAATATCAGAATTTAT+TGG + chr4_2:56427839-56427858 Msa0609070:three_prime_UTR 20.0%
!!! TGAGTGTGTTTTTTTTTTGT+TGG + chr4_2:56426253-56426272 Msa0609070:intron 25.0%
!! GTATACAAACCTTTTAGATT+TGG + chr4_2:56426414-56426433 Msa0609070:CDS 25.0%
!! TATCTAGGATTGGAATATTA+CGG + chr4_2:56427278-56427297 Msa0609070:three_prime_UTR 25.0%
! AGGTATAAATTTGAAGATTC+TGG + chr4_2:56427460-56427479 Msa0609070:three_prime_UTR 25.0%
! AACTTTCTTCTATTTCAGAA+TGG - chr4_2:56427589-56427608 None:intergenic 25.0%
! TATTGTGTTTATTGACAGAT+CGG + chr4_2:56427652-56427671 Msa0609070:three_prime_UTR 25.0%
! CAATATATTCATAAGGAGTT+AGG - chr4_2:56427754-56427773 None:intergenic 25.0%
! TGAATATATTGTTTGTAGAC+AGG + chr4_2:56427763-56427782 Msa0609070:three_prime_UTR 25.0%
! GAATATATTGTTTGTAGACA+GGG + chr4_2:56427764-56427783 Msa0609070:three_prime_UTR 25.0%
!!! ATTGAGAGCTTTTAAAGTTA+GGG - chr4_2:56428129-56428148 None:intergenic 25.0%
!!! AATTGAGAGCTTTTAAAGTT+AGG - chr4_2:56428130-56428149 None:intergenic 25.0%
!!! TGAGTGTGTTTTTTTTTTGT+TGG + chr4_2:56426253-56426272 Msa0609070:intron 25.0%
!! GTATACAAACCTTTTAGATT+TGG + chr4_2:56426414-56426433 Msa0609070:CDS 25.0%
!! TATCTAGGATTGGAATATTA+CGG + chr4_2:56427278-56427297 Msa0609070:three_prime_UTR 25.0%
! AGGTATAAATTTGAAGATTC+TGG + chr4_2:56427460-56427479 Msa0609070:three_prime_UTR 25.0%
! AACTTTCTTCTATTTCAGAA+TGG - chr4_2:56427589-56427608 None:intergenic 25.0%
! TATTGTGTTTATTGACAGAT+CGG + chr4_2:56427652-56427671 Msa0609070:three_prime_UTR 25.0%
! CAATATATTCATAAGGAGTT+AGG - chr4_2:56427754-56427773 None:intergenic 25.0%
! TGAATATATTGTTTGTAGAC+AGG + chr4_2:56427763-56427782 Msa0609070:three_prime_UTR 25.0%
! GAATATATTGTTTGTAGACA+GGG + chr4_2:56427764-56427783 Msa0609070:three_prime_UTR 25.0%
!!! ATTGAGAGCTTTTAAAGTTA+GGG - chr4_2:56428129-56428148 None:intergenic 25.0%
!!! AATTGAGAGCTTTTAAAGTT+AGG - chr4_2:56428130-56428149 None:intergenic 25.0%
!!! TATGATTGTTTTTGTCCTGT+TGG + chr4_2:56426283-56426302 Msa0609070:intron 30.0%
AAAAACCATTAATCACCAAC+AGG - chr4_2:56426301-56426320 None:intergenic 30.0%
!!! AGAACTGTGTATTTTTTGGA+AGG + chr4_2:56426369-56426388 Msa0609070:CDS 30.0%
TAAAAGGTTTGTATACGATC+TGG - chr4_2:56426410-56426429 None:intergenic 30.0%
!! TCTCTTTTCTTAGCTTTCAA+AGG - chr4_2:56426628-56426647 None:intergenic 30.0%
TTTGAAAGCTAAGAAAAGAG+AGG + chr4_2:56426627-56426646 Msa0609070:CDS 30.0%
!! TTCTTTGCTATTACAGCTTA+AGG + chr4_2:56426684-56426703 Msa0609070:CDS 30.0%
TAAAAGTTTGCCAAAACATC+AGG - chr4_2:56426838-56426857 None:intergenic 30.0%
!! GTTTTGGCAAACTTTTATGA+TGG + chr4_2:56426841-56426860 Msa0609070:CDS 30.0%
! TGGCTTTTATCAGTTGAAAA+CGG - chr4_2:56426909-56426928 None:intergenic 30.0%
GGTAGTTGAAATAATAAACC+CGG + chr4_2:56426989-56427008 Msa0609070:exon 30.0%
!! CGTTTTAACAGGGTTAAAAT+GGG + chr4_2:56427074-56427093 Msa0609070:three_prime_UTR 30.0%
! ATCTAGGATTGGAATATTAC+GGG + chr4_2:56427279-56427298 Msa0609070:three_prime_UTR 30.0%
! GACGATATGGACATTTTTAA+AGG + chr4_2:56427440-56427459 Msa0609070:three_prime_UTR 30.0%
! AAATTTGAAGATTCTGGCTA+TGG + chr4_2:56427466-56427485 Msa0609070:three_prime_UTR 30.0%
GATCTGTCAATAAACACAAT+AGG - chr4_2:56427653-56427672 None:intergenic 30.0%
!!! TAGGCAACTTTTTCAGTAAT+TGG - chr4_2:56427680-56427699 None:intergenic 30.0%
ACCTTCTTAGAAAAAGATGT+TGG + chr4_2:56428062-56428081 Msa0609070:three_prime_UTR 30.0%
CCTTCTTAGAAAAAGATGTT+GGG + chr4_2:56428063-56428082 Msa0609070:three_prime_UTR 30.0%
CTTCTTAGAAAAAGATGTTG+GGG + chr4_2:56428064-56428083 Msa0609070:three_prime_UTR 30.0%
! CTCTTATTAATGGAGTTTTG+TGG - chr4_2:56428225-56428244 None:intergenic 30.0%
TTTGCTTGGACTCTTATTAA+TGG - chr4_2:56428235-56428254 None:intergenic 30.0%
!!! TATGATTGTTTTTGTCCTGT+TGG + chr4_2:56426283-56426302 Msa0609070:intron 30.0%
AAAAACCATTAATCACCAAC+AGG - chr4_2:56426301-56426320 None:intergenic 30.0%
!!! AGAACTGTGTATTTTTTGGA+AGG + chr4_2:56426369-56426388 Msa0609070:CDS 30.0%
TAAAAGGTTTGTATACGATC+TGG - chr4_2:56426410-56426429 None:intergenic 30.0%
!! TCTCTTTTCTTAGCTTTCAA+AGG - chr4_2:56426628-56426647 None:intergenic 30.0%
TTTGAAAGCTAAGAAAAGAG+AGG + chr4_2:56426627-56426646 Msa0609070:CDS 30.0%
!! TTCTTTGCTATTACAGCTTA+AGG + chr4_2:56426684-56426703 Msa0609070:CDS 30.0%
TAAAAGTTTGCCAAAACATC+AGG - chr4_2:56426838-56426857 None:intergenic 30.0%
!! GTTTTGGCAAACTTTTATGA+TGG + chr4_2:56426841-56426860 Msa0609070:CDS 30.0%
! TGGCTTTTATCAGTTGAAAA+CGG - chr4_2:56426909-56426928 None:intergenic 30.0%
GGTAGTTGAAATAATAAACC+CGG + chr4_2:56426989-56427008 Msa0609070:exon 30.0%
!! CGTTTTAACAGGGTTAAAAT+GGG + chr4_2:56427074-56427093 Msa0609070:three_prime_UTR 30.0%
! ATCTAGGATTGGAATATTAC+GGG + chr4_2:56427279-56427298 Msa0609070:three_prime_UTR 30.0%
! GACGATATGGACATTTTTAA+AGG + chr4_2:56427440-56427459 Msa0609070:three_prime_UTR 30.0%
! AAATTTGAAGATTCTGGCTA+TGG + chr4_2:56427466-56427485 Msa0609070:three_prime_UTR 30.0%
GATCTGTCAATAAACACAAT+AGG - chr4_2:56427653-56427672 None:intergenic 30.0%
!!! TAGGCAACTTTTTCAGTAAT+TGG - chr4_2:56427680-56427699 None:intergenic 30.0%
ACCTTCTTAGAAAAAGATGT+TGG + chr4_2:56428062-56428081 Msa0609070:three_prime_UTR 30.0%
CCTTCTTAGAAAAAGATGTT+GGG + chr4_2:56428063-56428082 Msa0609070:three_prime_UTR 30.0%
CTTCTTAGAAAAAGATGTTG+GGG + chr4_2:56428064-56428083 Msa0609070:three_prime_UTR 30.0%
! CTCTTATTAATGGAGTTTTG+TGG - chr4_2:56428225-56428244 None:intergenic 30.0%
TTTGCTTGGACTCTTATTAA+TGG - chr4_2:56428235-56428254 None:intergenic 30.0%
!! TTTGTCCTGTTGGTGATTAA+TGG + chr4_2:56426293-56426312 Msa0609070:intron 35.0%
!!! GTGGAGAACTGTGTATTTTT+TGG + chr4_2:56426365-56426384 Msa0609070:CDS 35.0%
!! AACCTTTTAGATTTGGCTTC+TGG + chr4_2:56426421-56426440 Msa0609070:CDS 35.0%
!! ACCTTTTAGATTTGGCTTCT+GGG + chr4_2:56426422-56426441 Msa0609070:CDS 35.0%
CGATCAGAAGAAATAGTTGA+CGG - chr4_2:56426580-56426599 None:intergenic 35.0%
AAGAAAAGAGAGGACAACAA+AGG + chr4_2:56426637-56426656 Msa0609070:CDS 35.0%
AGAAAAGAGAGGACAACAAA+GGG + chr4_2:56426638-56426657 Msa0609070:CDS 35.0%
! TTGCTATTACAGCTTAAGGA+TGG + chr4_2:56426688-56426707 Msa0609070:CDS 35.0%
TGATACATCATCTTGTTCAG+CGG - chr4_2:56426770-56426789 None:intergenic 35.0%
TGATGTATCACAGTATTTGC+TGG + chr4_2:56426780-56426799 Msa0609070:CDS 35.0%
TTTATGATGGCTTCTGCAAA+AGG + chr4_2:56426854-56426873 Msa0609070:CDS 35.0%
! CGGTAACTTGTAATGAAAAG+TGG - chr4_2:56426889-56426908 None:intergenic 35.0%
AAACAAGCTGTTCTTTCAGA+AGG + chr4_2:56426968-56426987 Msa0609070:CDS 35.0%
AGTTGAAATAATAAACCCGG+AGG + chr4_2:56426992-56427011 Msa0609070:exon 35.0%
ACCCAAATATAATCATCCTC+CGG - chr4_2:56427011-56427030 None:intergenic 35.0%
GGTTCATGATTACCATTTGA+TGG + chr4_2:56427028-56427047 Msa0609070:three_prime_UTR 35.0%
AAACGCCTTCTTAGAAAAGT+TGG - chr4_2:56427059-56427078 None:intergenic 35.0%
!!! TTCTAAGAAGGCGTTTTAAC+AGG + chr4_2:56427063-56427082 Msa0609070:three_prime_UTR 35.0%
!!! TCTAAGAAGGCGTTTTAACA+GGG + chr4_2:56427064-56427083 Msa0609070:three_prime_UTR 35.0%
!! GCGTTTTAACAGGGTTAAAA+TGG + chr4_2:56427073-56427092 Msa0609070:three_prime_UTR 35.0%
!! TATATCTCCGATGATGGAAA+GGG - chr4_2:56427116-56427135 None:intergenic 35.0%
!! ATATATCTCCGATGATGGAA+AGG - chr4_2:56427117-56427136 None:intergenic 35.0%
TTCCATCATCGGAGATATAT+AGG + chr4_2:56427117-56427136 Msa0609070:three_prime_UTR 35.0%
TATATAGGACTCTTCCTGTT+AGG + chr4_2:56427132-56427151 Msa0609070:three_prime_UTR 35.0%
ATATAGGACTCTTCCTGTTA+GGG + chr4_2:56427133-56427152 Msa0609070:three_prime_UTR 35.0%
! TCTAGAGTATCAGTCAAAGA+GGG + chr4_2:56427253-56427272 Msa0609070:three_prime_UTR 35.0%
AGTATTAAGATCATGCCTGT+TGG + chr4_2:56427311-56427330 Msa0609070:three_prime_UTR 35.0%
GTATTAAGATCATGCCTGTT+GGG + chr4_2:56427312-56427331 Msa0609070:three_prime_UTR 35.0%
TGAATCTGTTATGAGGATGT+CGG + chr4_2:56427352-56427371 Msa0609070:three_prime_UTR 35.0%
! GAAGGAAAAACCATTTTGCT+TGG + chr4_2:56427413-56427432 Msa0609070:three_prime_UTR 35.0%
ATCGTCAATACCAAGCAAAA+TGG - chr4_2:56427426-56427445 None:intergenic 35.0%
!! TTTGCTTGGTATTGACGATA+TGG + chr4_2:56427427-56427446 Msa0609070:three_prime_UTR 35.0%
AAATAGAAGAAAGTTGCAGC+AGG + chr4_2:56427594-56427613 Msa0609070:three_prime_UTR 35.0%
AACACAATAGGTTCATAACC+AGG - chr4_2:56427641-56427660 None:intergenic 35.0%
TGTTATTGTCACAGCTGTAA+GGG + chr4_2:56427718-56427737 Msa0609070:three_prime_UTR 35.0%
TTACAAGCATGCTCTTCTTT+GGG - chr4_2:56427826-56427845 None:intergenic 35.0%
ATTACAAGCATGCTCTTCTT+TGG - chr4_2:56427827-56427846 None:intergenic 35.0%
!! CCCAACATCTTTTTCTAAGA+AGG - chr4_2:56428066-56428085 None:intergenic 35.0%
AGAAAAAGATGTTGGGGAAT+AGG + chr4_2:56428070-56428089 Msa0609070:three_prime_UTR 35.0%
!! TAGCTTTGGATTTAGAGTTG+TGG + chr4_2:56428096-56428115 Msa0609070:three_prime_UTR 35.0%
AAAGCTCTCAATTGATGCTA+TGG + chr4_2:56428137-56428156 Msa0609070:three_prime_UTR 35.0%
TATGGTTTCAGCTTACAAGA+GGG + chr4_2:56428155-56428174 Msa0609070:three_prime_UTR 35.0%
ACCATCATAGTCCAACAAAA+TGG - chr4_2:56428193-56428212 None:intergenic 35.0%
TAATAAGAGTCCAAGCAAAG+AGG + chr4_2:56428236-56428255 Msa0609070:three_prime_UTR 35.0%
! CAAAGAGGTCATATCTCTTT+TGG + chr4_2:56428251-56428270 Msa0609070:three_prime_UTR 35.0%
!! TTTGTCCTGTTGGTGATTAA+TGG + chr4_2:56426293-56426312 Msa0609070:intron 35.0%
!!! GTGGAGAACTGTGTATTTTT+TGG + chr4_2:56426365-56426384 Msa0609070:CDS 35.0%
!! AACCTTTTAGATTTGGCTTC+TGG + chr4_2:56426421-56426440 Msa0609070:CDS 35.0%
!! ACCTTTTAGATTTGGCTTCT+GGG + chr4_2:56426422-56426441 Msa0609070:CDS 35.0%
CGATCAGAAGAAATAGTTGA+CGG - chr4_2:56426580-56426599 None:intergenic 35.0%
AAGAAAAGAGAGGACAACAA+AGG + chr4_2:56426637-56426656 Msa0609070:CDS 35.0%
AGAAAAGAGAGGACAACAAA+GGG + chr4_2:56426638-56426657 Msa0609070:CDS 35.0%
! TTGCTATTACAGCTTAAGGA+TGG + chr4_2:56426688-56426707 Msa0609070:CDS 35.0%
TGATACATCATCTTGTTCAG+CGG - chr4_2:56426770-56426789 None:intergenic 35.0%
TGATGTATCACAGTATTTGC+TGG + chr4_2:56426780-56426799 Msa0609070:CDS 35.0%
TTTATGATGGCTTCTGCAAA+AGG + chr4_2:56426854-56426873 Msa0609070:CDS 35.0%
! CGGTAACTTGTAATGAAAAG+TGG - chr4_2:56426889-56426908 None:intergenic 35.0%
AAACAAGCTGTTCTTTCAGA+AGG + chr4_2:56426968-56426987 Msa0609070:CDS 35.0%
AGTTGAAATAATAAACCCGG+AGG + chr4_2:56426992-56427011 Msa0609070:exon 35.0%
ACCCAAATATAATCATCCTC+CGG - chr4_2:56427011-56427030 None:intergenic 35.0%
GGTTCATGATTACCATTTGA+TGG + chr4_2:56427028-56427047 Msa0609070:three_prime_UTR 35.0%
AAACGCCTTCTTAGAAAAGT+TGG - chr4_2:56427059-56427078 None:intergenic 35.0%
!!! TTCTAAGAAGGCGTTTTAAC+AGG + chr4_2:56427063-56427082 Msa0609070:three_prime_UTR 35.0%
!!! TCTAAGAAGGCGTTTTAACA+GGG + chr4_2:56427064-56427083 Msa0609070:three_prime_UTR 35.0%
!! GCGTTTTAACAGGGTTAAAA+TGG + chr4_2:56427073-56427092 Msa0609070:three_prime_UTR 35.0%
!! TATATCTCCGATGATGGAAA+GGG - chr4_2:56427116-56427135 None:intergenic 35.0%
!! ATATATCTCCGATGATGGAA+AGG - chr4_2:56427117-56427136 None:intergenic 35.0%
TTCCATCATCGGAGATATAT+AGG + chr4_2:56427117-56427136 Msa0609070:three_prime_UTR 35.0%
TATATAGGACTCTTCCTGTT+AGG + chr4_2:56427132-56427151 Msa0609070:three_prime_UTR 35.0%
ATATAGGACTCTTCCTGTTA+GGG + chr4_2:56427133-56427152 Msa0609070:three_prime_UTR 35.0%
! TCTAGAGTATCAGTCAAAGA+GGG + chr4_2:56427253-56427272 Msa0609070:three_prime_UTR 35.0%
AGTATTAAGATCATGCCTGT+TGG + chr4_2:56427311-56427330 Msa0609070:three_prime_UTR 35.0%
GTATTAAGATCATGCCTGTT+GGG + chr4_2:56427312-56427331 Msa0609070:three_prime_UTR 35.0%
TGAATCTGTTATGAGGATGT+CGG + chr4_2:56427352-56427371 Msa0609070:three_prime_UTR 35.0%
! GAAGGAAAAACCATTTTGCT+TGG + chr4_2:56427413-56427432 Msa0609070:three_prime_UTR 35.0%
ATCGTCAATACCAAGCAAAA+TGG - chr4_2:56427426-56427445 None:intergenic 35.0%
!! TTTGCTTGGTATTGACGATA+TGG + chr4_2:56427427-56427446 Msa0609070:three_prime_UTR 35.0%
AAATAGAAGAAAGTTGCAGC+AGG + chr4_2:56427594-56427613 Msa0609070:three_prime_UTR 35.0%
AACACAATAGGTTCATAACC+AGG - chr4_2:56427641-56427660 None:intergenic 35.0%
TGTTATTGTCACAGCTGTAA+GGG + chr4_2:56427718-56427737 Msa0609070:three_prime_UTR 35.0%
TTACAAGCATGCTCTTCTTT+GGG - chr4_2:56427826-56427845 None:intergenic 35.0%
ATTACAAGCATGCTCTTCTT+TGG - chr4_2:56427827-56427846 None:intergenic 35.0%
!! CCCAACATCTTTTTCTAAGA+AGG - chr4_2:56428066-56428085 None:intergenic 35.0%
AGAAAAAGATGTTGGGGAAT+AGG + chr4_2:56428070-56428089 Msa0609070:three_prime_UTR 35.0%
!! TAGCTTTGGATTTAGAGTTG+TGG + chr4_2:56428096-56428115 Msa0609070:three_prime_UTR 35.0%
AAAGCTCTCAATTGATGCTA+TGG + chr4_2:56428137-56428156 Msa0609070:three_prime_UTR 35.0%
TATGGTTTCAGCTTACAAGA+GGG + chr4_2:56428155-56428174 Msa0609070:three_prime_UTR 35.0%
ACCATCATAGTCCAACAAAA+TGG - chr4_2:56428193-56428212 None:intergenic 35.0%
TAATAAGAGTCCAAGCAAAG+AGG + chr4_2:56428236-56428255 Msa0609070:three_prime_UTR 35.0%
! CAAAGAGGTCATATCTCTTT+TGG + chr4_2:56428251-56428270 Msa0609070:three_prime_UTR 35.0%
! TTGCAGAGTGTAGAGTTTTG+TGG + chr4_2:56426346-56426365 Msa0609070:intron 40.0%
TCCCAGAAGCCAAATCTAAA+AGG - chr4_2:56426426-56426445 None:intergenic 40.0%
TCAGGCAGTAAGTGTTTCTT+CGG + chr4_2:56426549-56426568 Msa0609070:CDS 40.0%
!! ACAAAGGGTGGAGTTTTAGT+TGG + chr4_2:56426653-56426672 Msa0609070:CDS 40.0%
!!! GTGGAGTTTTAGTTGGAATG+AGG + chr4_2:56426660-56426679 Msa0609070:CDS 40.0%
! GGATGGATTTCCAGAAGATA+TGG + chr4_2:56426705-56426724 Msa0609070:CDS 40.0%
TGGATTTCCAGAAGATATGG+AGG + chr4_2:56426708-56426727 Msa0609070:CDS 40.0%
TACAGAACCTCCATATCTTC+TGG - chr4_2:56426718-56426737 None:intergenic 40.0%
GATATGGAGGTTCTGTATGT+TGG + chr4_2:56426721-56426740 Msa0609070:CDS 40.0%
GATACATCATCTTGTTCAGC+GGG - chr4_2:56426769-56426788 None:intergenic 40.0%
! TTTTCTGCCTCCTGATGTTT+TGG + chr4_2:56426825-56426844 Msa0609070:CDS 40.0%
AAGTTTGCCAAAACATCAGG+AGG - chr4_2:56426835-56426854 None:intergenic 40.0%
GCTTCTGCAAAAGGCAATTA+TGG + chr4_2:56426863-56426882 Msa0609070:CDS 40.0%
ACCCGGAGGATGATTATATT+TGG + chr4_2:56427006-56427025 Msa0609070:three_prime_UTR 40.0%
CCCAAATATAATCATCCTCC+GGG - chr4_2:56427010-56427029 None:intergenic 40.0%
CCCGGAGGATGATTATATTT+GGG + chr4_2:56427007-56427026 Msa0609070:three_prime_UTR 40.0%
!! TGCTGCCAACTTTTCTAAGA+AGG + chr4_2:56427051-56427070 Msa0609070:three_prime_UTR 40.0%
!! ATATCTCCGATGATGGAAAG+GGG - chr4_2:56427115-56427134 None:intergenic 40.0%
GTCCTATATATCTCCGATGA+TGG - chr4_2:56427122-56427141 None:intergenic 40.0%
TTTAGTATCTCCTCCCTAAC+AGG - chr4_2:56427149-56427168 None:intergenic 40.0%
GACGAGCATAATCGAAAGTA+TGG - chr4_2:56427202-56427221 None:intergenic 40.0%
! GTCTAGAGTATCAGTCAAAG+AGG + chr4_2:56427252-56427271 Msa0609070:three_prime_UTR 40.0%
! CTAGAGTATCAGTCAAAGAG+GGG + chr4_2:56427254-56427273 Msa0609070:three_prime_UTR 40.0%
! AAAGAGGGGTTATCTAGGAT+TGG + chr4_2:56427268-56427287 Msa0609070:three_prime_UTR 40.0%
TAGGATTGGAATATTACGGG+AGG + chr4_2:56427282-56427301 Msa0609070:three_prime_UTR 40.0%
GTCGGATTGAATCTGTTATG+AGG + chr4_2:56427345-56427364 Msa0609070:three_prime_UTR 40.0%
GAGCTCAAACAGCAATTTGA+AGG + chr4_2:56427395-56427414 Msa0609070:three_prime_UTR 40.0%
TTAACCCTGCTAGAGGTAAA+GGG + chr4_2:56427546-56427565 Msa0609070:three_prime_UTR 40.0%
TGACAATAACACACTCAGCA+AGG - chr4_2:56427709-56427728 None:intergenic 40.0%
! GTGTTATTGTCACAGCTGTA+AGG + chr4_2:56427717-56427736 Msa0609070:three_prime_UTR 40.0%
GTTTGTAGACAGGGAATATC+TGG + chr4_2:56427773-56427792 Msa0609070:three_prime_UTR 40.0%
TTCGCATTGGAACTTGATTC+AGG - chr4_2:56427800-56427819 None:intergenic 40.0%
! CAACATTCCATGGATTGACA+CGG - chr4_2:56427892-56427911 None:intergenic 40.0%
ATGGAATGTTGAAGCAACTG+CGG + chr4_2:56427901-56427920 Msa0609070:three_prime_UTR 40.0%
GAAGCCATTTCAATGAGTGA+TGG + chr4_2:56427935-56427954 Msa0609070:three_prime_UTR 40.0%
CTCTCCATCACTCATTGAAA+TGG - chr4_2:56427942-56427961 None:intergenic 40.0%
!! TGCGGCATGAAAAGCATTAT+CGG + chr4_2:56427969-56427988 Msa0609070:three_prime_UTR 40.0%
ACGTAGTTTCTTGCAAGACA+TGG + chr4_2:56428024-56428043 Msa0609070:three_prime_UTR 40.0%
TTTCTTGCAAGACATGGAGA+GGG + chr4_2:56428030-56428049 Msa0609070:three_prime_UTR 40.0%
CTATGGTTTCAGCTTACAAG+AGG + chr4_2:56428154-56428173 Msa0609070:three_prime_UTR 40.0%
TTACAAGAGGGCAAAGAGTA+GGG + chr4_2:56428167-56428186 Msa0609070:three_prime_UTR 40.0%
!! AAAGAGTAGGGCCATTTTGT+TGG + chr4_2:56428179-56428198 Msa0609070:three_prime_UTR 40.0%
!! GCCATTTTGTTGGACTATGA+TGG + chr4_2:56428189-56428208 Msa0609070:three_prime_UTR 40.0%
AGAGATATGACCTCTTTGCT+TGG - chr4_2:56428249-56428268 None:intergenic 40.0%
! TTGCAGAGTGTAGAGTTTTG+TGG + chr4_2:56426346-56426365 Msa0609070:intron 40.0%
TCCCAGAAGCCAAATCTAAA+AGG - chr4_2:56426426-56426445 None:intergenic 40.0%
TCAGGCAGTAAGTGTTTCTT+CGG + chr4_2:56426549-56426568 Msa0609070:CDS 40.0%
!! ACAAAGGGTGGAGTTTTAGT+TGG + chr4_2:56426653-56426672 Msa0609070:CDS 40.0%
!!! GTGGAGTTTTAGTTGGAATG+AGG + chr4_2:56426660-56426679 Msa0609070:CDS 40.0%
! GGATGGATTTCCAGAAGATA+TGG + chr4_2:56426705-56426724 Msa0609070:CDS 40.0%
TGGATTTCCAGAAGATATGG+AGG + chr4_2:56426708-56426727 Msa0609070:CDS 40.0%
TACAGAACCTCCATATCTTC+TGG - chr4_2:56426718-56426737 None:intergenic 40.0%
GATATGGAGGTTCTGTATGT+TGG + chr4_2:56426721-56426740 Msa0609070:CDS 40.0%
GATACATCATCTTGTTCAGC+GGG - chr4_2:56426769-56426788 None:intergenic 40.0%
! TTTTCTGCCTCCTGATGTTT+TGG + chr4_2:56426825-56426844 Msa0609070:CDS 40.0%
AAGTTTGCCAAAACATCAGG+AGG - chr4_2:56426835-56426854 None:intergenic 40.0%
GCTTCTGCAAAAGGCAATTA+TGG + chr4_2:56426863-56426882 Msa0609070:CDS 40.0%
ACCCGGAGGATGATTATATT+TGG + chr4_2:56427006-56427025 Msa0609070:three_prime_UTR 40.0%
CCCAAATATAATCATCCTCC+GGG - chr4_2:56427010-56427029 None:intergenic 40.0%
CCCGGAGGATGATTATATTT+GGG + chr4_2:56427007-56427026 Msa0609070:three_prime_UTR 40.0%
!! TGCTGCCAACTTTTCTAAGA+AGG + chr4_2:56427051-56427070 Msa0609070:three_prime_UTR 40.0%
!! ATATCTCCGATGATGGAAAG+GGG - chr4_2:56427115-56427134 None:intergenic 40.0%
GTCCTATATATCTCCGATGA+TGG - chr4_2:56427122-56427141 None:intergenic 40.0%
TTTAGTATCTCCTCCCTAAC+AGG - chr4_2:56427149-56427168 None:intergenic 40.0%
GACGAGCATAATCGAAAGTA+TGG - chr4_2:56427202-56427221 None:intergenic 40.0%
! GTCTAGAGTATCAGTCAAAG+AGG + chr4_2:56427252-56427271 Msa0609070:three_prime_UTR 40.0%
! CTAGAGTATCAGTCAAAGAG+GGG + chr4_2:56427254-56427273 Msa0609070:three_prime_UTR 40.0%
! AAAGAGGGGTTATCTAGGAT+TGG + chr4_2:56427268-56427287 Msa0609070:three_prime_UTR 40.0%
TAGGATTGGAATATTACGGG+AGG + chr4_2:56427282-56427301 Msa0609070:three_prime_UTR 40.0%
GTCGGATTGAATCTGTTATG+AGG + chr4_2:56427345-56427364 Msa0609070:three_prime_UTR 40.0%
GAGCTCAAACAGCAATTTGA+AGG + chr4_2:56427395-56427414 Msa0609070:three_prime_UTR 40.0%
TTAACCCTGCTAGAGGTAAA+GGG + chr4_2:56427546-56427565 Msa0609070:three_prime_UTR 40.0%
TGACAATAACACACTCAGCA+AGG - chr4_2:56427709-56427728 None:intergenic 40.0%
! GTGTTATTGTCACAGCTGTA+AGG + chr4_2:56427717-56427736 Msa0609070:three_prime_UTR 40.0%
GTTTGTAGACAGGGAATATC+TGG + chr4_2:56427773-56427792 Msa0609070:three_prime_UTR 40.0%
TTCGCATTGGAACTTGATTC+AGG - chr4_2:56427800-56427819 None:intergenic 40.0%
! CAACATTCCATGGATTGACA+CGG - chr4_2:56427892-56427911 None:intergenic 40.0%
ATGGAATGTTGAAGCAACTG+CGG + chr4_2:56427901-56427920 Msa0609070:three_prime_UTR 40.0%
GAAGCCATTTCAATGAGTGA+TGG + chr4_2:56427935-56427954 Msa0609070:three_prime_UTR 40.0%
CTCTCCATCACTCATTGAAA+TGG - chr4_2:56427942-56427961 None:intergenic 40.0%
!! TGCGGCATGAAAAGCATTAT+CGG + chr4_2:56427969-56427988 Msa0609070:three_prime_UTR 40.0%
ACGTAGTTTCTTGCAAGACA+TGG + chr4_2:56428024-56428043 Msa0609070:three_prime_UTR 40.0%
TTTCTTGCAAGACATGGAGA+GGG + chr4_2:56428030-56428049 Msa0609070:three_prime_UTR 40.0%
CTATGGTTTCAGCTTACAAG+AGG + chr4_2:56428154-56428173 Msa0609070:three_prime_UTR 40.0%
TTACAAGAGGGCAAAGAGTA+GGG + chr4_2:56428167-56428186 Msa0609070:three_prime_UTR 40.0%
!! AAAGAGTAGGGCCATTTTGT+TGG + chr4_2:56428179-56428198 Msa0609070:three_prime_UTR 40.0%
!! GCCATTTTGTTGGACTATGA+TGG + chr4_2:56428189-56428208 Msa0609070:three_prime_UTR 40.0%
AGAGATATGACCTCTTTGCT+TGG - chr4_2:56428249-56428268 None:intergenic 40.0%
! TTCTGGGAATTTCCCAGCAA+TGG + chr4_2:56426438-56426457 Msa0609070:CDS 45.0%
TCTGGGAATTTCCCAGCAAT+GGG + chr4_2:56426439-56426458 Msa0609070:CDS 45.0%
GAATTTCCCAGCAATGGGAT+CGG + chr4_2:56426444-56426463 Msa0609070:CDS 45.0%
AATTTCCCAGCAATGGGATC+GGG + chr4_2:56426445-56426464 Msa0609070:CDS 45.0%
GGAGGGAGTTTAAAGAACGA+AGG + chr4_2:56426473-56426492 Msa0609070:CDS 45.0%
GGGAGTTTAAAGAACGAAGG+CGG + chr4_2:56426476-56426495 Msa0609070:CDS 45.0%
AAAGAGAGGACAACAAAGGG+TGG + chr4_2:56426641-56426660 Msa0609070:CDS 45.0%
ACATCAGGAGGCAGAAAAGT+GGG - chr4_2:56426823-56426842 None:intergenic 45.0%
AACATCAGGAGGCAGAAAAG+TGG - chr4_2:56426824-56426843 None:intergenic 45.0%
GAACATAGGCTTCCCACAAA+TGG - chr4_2:56426944-56426963 None:intergenic 45.0%
TTTGTGGGAAGCCTATGTTC+TGG + chr4_2:56426944-56426963 Msa0609070:CDS 45.0%
! CAGCTTGTTTGCCAGAACAT+AGG - chr4_2:56426958-56426977 None:intergenic 45.0%
AAGTTGGCAGCACCATCAAA+TGG - chr4_2:56427043-56427062 None:intergenic 45.0%
CAGTCAAAGAGGGGTTATCT+AGG + chr4_2:56427263-56427282 Msa0609070:three_prime_UTR 45.0%
ATGCCTGTTGGGATTCACAT+GGG + chr4_2:56427323-56427342 Msa0609070:three_prime_UTR 45.0%
TGTTATGAGGATGTCGGATG+AGG + chr4_2:56427358-56427377 Msa0609070:three_prime_UTR 45.0%
TGCTGAAACAACACCCCAAA+TGG + chr4_2:56427495-56427514 Msa0609070:three_prime_UTR 45.0%
AAACAACACCCCAAATGGCA+AGG + chr4_2:56427500-56427519 Msa0609070:three_prime_UTR 45.0%
! ACAGCTCTTCCTTGCCATTT+GGG - chr4_2:56427512-56427531 None:intergenic 45.0%
AACAGCTCTTCCTTGCCATT+TGG - chr4_2:56427513-56427532 None:intergenic 45.0%
CTCTAGCAGGGTTAACTATC+TGG - chr4_2:56427541-56427560 None:intergenic 45.0%
CAGATAGTTAACCCTGCTAG+AGG + chr4_2:56427539-56427558 Msa0609070:three_prime_UTR 45.0%
GTTAACCCTGCTAGAGGTAA+AGG + chr4_2:56427545-56427564 Msa0609070:three_prime_UTR 45.0%
GTATCCCTTTACCTCTAGCA+GGG - chr4_2:56427553-56427572 None:intergenic 45.0%
TGTATCCCTTTACCTCTAGC+AGG - chr4_2:56427554-56427573 None:intergenic 45.0%
! AGCAGGATCAACAGAGTGTT+TGG + chr4_2:56427611-56427630 Msa0609070:three_prime_UTR 45.0%
ACACTCAGCAAGGCTGTAAT+AGG - chr4_2:56427699-56427718 None:intergenic 45.0%
ATTGTCACAGCTGTAAGGGA+TGG + chr4_2:56427722-56427741 Msa0609070:three_prime_UTR 45.0%
TTGTCACAGCTGTAAGGGAT+GGG + chr4_2:56427723-56427742 Msa0609070:three_prime_UTR 45.0%
CTTCTTTGGGCTATTCGCAT+TGG - chr4_2:56427813-56427832 None:intergenic 45.0%
GCAGTTGCTTCAACATTCCA+TGG - chr4_2:56427902-56427921 None:intergenic 45.0%
GTTTCTTGCAAGACATGGAG+AGG + chr4_2:56428029-56428048 Msa0609070:three_prime_UTR 45.0%
TGGGGAATAGGTCTTAGCTT+TGG + chr4_2:56428082-56428101 Msa0609070:three_prime_UTR 45.0%
CTTACAAGAGGGCAAAGAGT+AGG + chr4_2:56428166-56428185 Msa0609070:three_prime_UTR 45.0%
! TTCTGGGAATTTCCCAGCAA+TGG + chr4_2:56426438-56426457 Msa0609070:CDS 45.0%
TCTGGGAATTTCCCAGCAAT+GGG + chr4_2:56426439-56426458 Msa0609070:CDS 45.0%
GAATTTCCCAGCAATGGGAT+CGG + chr4_2:56426444-56426463 Msa0609070:CDS 45.0%
AATTTCCCAGCAATGGGATC+GGG + chr4_2:56426445-56426464 Msa0609070:CDS 45.0%
GGAGGGAGTTTAAAGAACGA+AGG + chr4_2:56426473-56426492 Msa0609070:CDS 45.0%
GGGAGTTTAAAGAACGAAGG+CGG + chr4_2:56426476-56426495 Msa0609070:CDS 45.0%
AAAGAGAGGACAACAAAGGG+TGG + chr4_2:56426641-56426660 Msa0609070:CDS 45.0%
ACATCAGGAGGCAGAAAAGT+GGG - chr4_2:56426823-56426842 None:intergenic 45.0%
AACATCAGGAGGCAGAAAAG+TGG - chr4_2:56426824-56426843 None:intergenic 45.0%
GAACATAGGCTTCCCACAAA+TGG - chr4_2:56426944-56426963 None:intergenic 45.0%
TTTGTGGGAAGCCTATGTTC+TGG + chr4_2:56426944-56426963 Msa0609070:CDS 45.0%
! CAGCTTGTTTGCCAGAACAT+AGG - chr4_2:56426958-56426977 None:intergenic 45.0%
AAGTTGGCAGCACCATCAAA+TGG - chr4_2:56427043-56427062 None:intergenic 45.0%
CAGTCAAAGAGGGGTTATCT+AGG + chr4_2:56427263-56427282 Msa0609070:three_prime_UTR 45.0%
ATGCCTGTTGGGATTCACAT+GGG + chr4_2:56427323-56427342 Msa0609070:three_prime_UTR 45.0%
TGTTATGAGGATGTCGGATG+AGG + chr4_2:56427358-56427377 Msa0609070:three_prime_UTR 45.0%
TGCTGAAACAACACCCCAAA+TGG + chr4_2:56427495-56427514 Msa0609070:three_prime_UTR 45.0%
AAACAACACCCCAAATGGCA+AGG + chr4_2:56427500-56427519 Msa0609070:three_prime_UTR 45.0%
! ACAGCTCTTCCTTGCCATTT+GGG - chr4_2:56427512-56427531 None:intergenic 45.0%
AACAGCTCTTCCTTGCCATT+TGG - chr4_2:56427513-56427532 None:intergenic 45.0%
CTCTAGCAGGGTTAACTATC+TGG - chr4_2:56427541-56427560 None:intergenic 45.0%
CAGATAGTTAACCCTGCTAG+AGG + chr4_2:56427539-56427558 Msa0609070:three_prime_UTR 45.0%
GTTAACCCTGCTAGAGGTAA+AGG + chr4_2:56427545-56427564 Msa0609070:three_prime_UTR 45.0%
GTATCCCTTTACCTCTAGCA+GGG - chr4_2:56427553-56427572 None:intergenic 45.0%
TGTATCCCTTTACCTCTAGC+AGG - chr4_2:56427554-56427573 None:intergenic 45.0%
! AGCAGGATCAACAGAGTGTT+TGG + chr4_2:56427611-56427630 Msa0609070:three_prime_UTR 45.0%
ACACTCAGCAAGGCTGTAAT+AGG - chr4_2:56427699-56427718 None:intergenic 45.0%
ATTGTCACAGCTGTAAGGGA+TGG + chr4_2:56427722-56427741 Msa0609070:three_prime_UTR 45.0%
TTGTCACAGCTGTAAGGGAT+GGG + chr4_2:56427723-56427742 Msa0609070:three_prime_UTR 45.0%
CTTCTTTGGGCTATTCGCAT+TGG - chr4_2:56427813-56427832 None:intergenic 45.0%
GCAGTTGCTTCAACATTCCA+TGG - chr4_2:56427902-56427921 None:intergenic 45.0%
GTTTCTTGCAAGACATGGAG+AGG + chr4_2:56428029-56428048 Msa0609070:three_prime_UTR 45.0%
TGGGGAATAGGTCTTAGCTT+TGG + chr4_2:56428082-56428101 Msa0609070:three_prime_UTR 45.0%
CTTACAAGAGGGCAAAGAGT+AGG + chr4_2:56428166-56428185 Msa0609070:three_prime_UTR 45.0%
ATTTCCCAGCAATGGGATCG+GGG + chr4_2:56426446-56426465 Msa0609070:CDS 50.0%
CTCAGAGGTGGATGATGATC+AGG + chr4_2:56426531-56426550 Msa0609070:CDS 50.0%
CATCAGGAGGCAGAAAAGTG+GGG - chr4_2:56426822-56426841 None:intergenic 50.0%
ACAAATGGCGATCAAAGCGG+TGG - chr4_2:56426929-56426948 None:intergenic 50.0%
ACCGCTTTGATCGCCATTTG+TGG + chr4_2:56426928-56426947 Msa0609070:CDS 50.0%
CCCACAAATGGCGATCAAAG+CGG - chr4_2:56426932-56426951 None:intergenic 50.0%
CCGCTTTGATCGCCATTTGT+GGG + chr4_2:56426929-56426948 Msa0609070:CDS 50.0%
GCATAGCCCCTTTCCATCAT+CGG + chr4_2:56427106-56427125 Msa0609070:three_prime_UTR 50.0%
TAGGACTCTTCCTGTTAGGG+AGG + chr4_2:56427136-56427155 Msa0609070:three_prime_UTR 50.0%
TTCCTGCTGCAGTCGTATGT+TGG + chr4_2:56427229-56427248 Msa0609070:three_prime_UTR 50.0%
TCCTGCTGCAGTCGTATGTT+GGG + chr4_2:56427230-56427249 Msa0609070:three_prime_UTR 50.0%
CATGCCTGTTGGGATTCACA+TGG + chr4_2:56427322-56427341 Msa0609070:three_prime_UTR 50.0%
CTGTTGGGATTCACATGGGT+CGG + chr4_2:56427327-56427346 Msa0609070:three_prime_UTR 50.0%
! GATGTCGGATGAGGAGTGTA+AGG + chr4_2:56427367-56427386 Msa0609070:three_prime_UTR 50.0%
! GGATGAGGAGTGTAAGGCAA+GGG + chr4_2:56427373-56427392 Msa0609070:three_prime_UTR 50.0%
! CAGCTCTTCCTTGCCATTTG+GGG - chr4_2:56427511-56427530 None:intergenic 50.0%
! AACAGAGTGTTTGGACGACC+TGG + chr4_2:56427620-56427639 Msa0609070:three_prime_UTR 50.0%
GGTGTTCTCCATCGCTTAGT+GGG + chr4_2:56427861-56427880 Msa0609070:three_prime_UTR 50.0%
GTGTTCTCCATCGCTTAGTG+GGG + chr4_2:56427862-56427881 Msa0609070:three_prime_UTR 50.0%
GAATGTTGAAGCAACTGCGG+AGG + chr4_2:56427904-56427923 Msa0609070:three_prime_UTR 50.0%
! GTGATGGAGAGAAGCAGTTG+CGG + chr4_2:56427951-56427970 Msa0609070:three_prime_UTR 50.0%
GTATGTCAGCACTCATGACG+TGG + chr4_2:56427991-56428010 Msa0609070:three_prime_UTR 50.0%
ATTTCCCAGCAATGGGATCG+GGG + chr4_2:56426446-56426465 Msa0609070:CDS 50.0%
CTCAGAGGTGGATGATGATC+AGG + chr4_2:56426531-56426550 Msa0609070:CDS 50.0%
CATCAGGAGGCAGAAAAGTG+GGG - chr4_2:56426822-56426841 None:intergenic 50.0%
ACAAATGGCGATCAAAGCGG+TGG - chr4_2:56426929-56426948 None:intergenic 50.0%
ACCGCTTTGATCGCCATTTG+TGG + chr4_2:56426928-56426947 Msa0609070:CDS 50.0%
CCCACAAATGGCGATCAAAG+CGG - chr4_2:56426932-56426951 None:intergenic 50.0%
CCGCTTTGATCGCCATTTGT+GGG + chr4_2:56426929-56426948 Msa0609070:CDS 50.0%
GCATAGCCCCTTTCCATCAT+CGG + chr4_2:56427106-56427125 Msa0609070:three_prime_UTR 50.0%
TAGGACTCTTCCTGTTAGGG+AGG + chr4_2:56427136-56427155 Msa0609070:three_prime_UTR 50.0%
TTCCTGCTGCAGTCGTATGT+TGG + chr4_2:56427229-56427248 Msa0609070:three_prime_UTR 50.0%
TCCTGCTGCAGTCGTATGTT+GGG + chr4_2:56427230-56427249 Msa0609070:three_prime_UTR 50.0%
CATGCCTGTTGGGATTCACA+TGG + chr4_2:56427322-56427341 Msa0609070:three_prime_UTR 50.0%
CTGTTGGGATTCACATGGGT+CGG + chr4_2:56427327-56427346 Msa0609070:three_prime_UTR 50.0%
! GATGTCGGATGAGGAGTGTA+AGG + chr4_2:56427367-56427386 Msa0609070:three_prime_UTR 50.0%
! GGATGAGGAGTGTAAGGCAA+GGG + chr4_2:56427373-56427392 Msa0609070:three_prime_UTR 50.0%
! CAGCTCTTCCTTGCCATTTG+GGG - chr4_2:56427511-56427530 None:intergenic 50.0%
! AACAGAGTGTTTGGACGACC+TGG + chr4_2:56427620-56427639 Msa0609070:three_prime_UTR 50.0%
GGTGTTCTCCATCGCTTAGT+GGG + chr4_2:56427861-56427880 Msa0609070:three_prime_UTR 50.0%
GTGTTCTCCATCGCTTAGTG+GGG + chr4_2:56427862-56427881 Msa0609070:three_prime_UTR 50.0%
GAATGTTGAAGCAACTGCGG+AGG + chr4_2:56427904-56427923 Msa0609070:three_prime_UTR 50.0%
! GTGATGGAGAGAAGCAGTTG+CGG + chr4_2:56427951-56427970 Msa0609070:three_prime_UTR 50.0%
GTATGTCAGCACTCATGACG+TGG + chr4_2:56427991-56428010 Msa0609070:three_prime_UTR 50.0%
!! TCCACCTCTGAGACAATCCC+CGG - chr4_2:56426523-56426542 None:intergenic 55.0%
ACCCAACATACGACTGCAGC+AGG - chr4_2:56427234-56427253 None:intergenic 55.0%
CGACCCATGTGAATCCCAAC+AGG - chr4_2:56427329-56427348 None:intergenic 55.0%
! CGGATGAGGAGTGTAAGGCA+AGG + chr4_2:56427372-56427391 Msa0609070:three_prime_UTR 55.0%
GGGTGTTCTCCATCGCTTAG+TGG + chr4_2:56427860-56427879 Msa0609070:three_prime_UTR 55.0%
GGGCTATCCGTGTCAATCCA+TGG + chr4_2:56427882-56427901 Msa0609070:three_prime_UTR 55.0%
GCACTCATGACGTGGCTTAC+TGG + chr4_2:56427999-56428018 Msa0609070:three_prime_UTR 55.0%
AGACATGGAGAGGGCTTGCA+CGG + chr4_2:56428039-56428058 Msa0609070:three_prime_UTR 55.0%
!! TCCACCTCTGAGACAATCCC+CGG - chr4_2:56426523-56426542 None:intergenic 55.0%
ACCCAACATACGACTGCAGC+AGG - chr4_2:56427234-56427253 None:intergenic 55.0%
CGACCCATGTGAATCCCAAC+AGG - chr4_2:56427329-56427348 None:intergenic 55.0%
! CGGATGAGGAGTGTAAGGCA+AGG + chr4_2:56427372-56427391 Msa0609070:three_prime_UTR 55.0%
GGGTGTTCTCCATCGCTTAG+TGG + chr4_2:56427860-56427879 Msa0609070:three_prime_UTR 55.0%
GGGCTATCCGTGTCAATCCA+TGG + chr4_2:56427882-56427901 Msa0609070:three_prime_UTR 55.0%
GCACTCATGACGTGGCTTAC+TGG + chr4_2:56427999-56428018 Msa0609070:three_prime_UTR 55.0%
AGACATGGAGAGGGCTTGCA+CGG + chr4_2:56428039-56428058 Msa0609070:three_prime_UTR 55.0%
AAGAACGAAGGCGGATGCCG+AGG + chr4_2:56426485-56426504 Msa0609070:CDS 60.0%
AGAACGAAGGCGGATGCCGA+GGG + chr4_2:56426486-56426505 Msa0609070:CDS 60.0%
GCCGAGGGTTATGAGTGTCC+CGG + chr4_2:56426501-56426520 Msa0609070:CDS 60.0%
CCCGGGACACTCATAACCCT+CGG - chr4_2:56426505-56426524 None:intergenic 60.0%
CCGAGGGTTATGAGTGTCCC+GGG + chr4_2:56426502-56426521 Msa0609070:CDS 60.0%
CGAGGGTTATGAGTGTCCCG+GGG + chr4_2:56426503-56426522 Msa0609070:CDS 60.0%
TGTCCCGGGGATTGTCTCAG+AGG + chr4_2:56426516-56426535 Msa0609070:CDS 60.0%
!! CCACCTCTGAGACAATCCCC+GGG - chr4_2:56426522-56426541 None:intergenic 60.0%
CGGATAGCCCCACTAAGCGA+TGG - chr4_2:56427872-56427891 None:intergenic 60.0%
AAGAACGAAGGCGGATGCCG+AGG + chr4_2:56426485-56426504 Msa0609070:CDS 60.0%
AGAACGAAGGCGGATGCCGA+GGG + chr4_2:56426486-56426505 Msa0609070:CDS 60.0%
GCCGAGGGTTATGAGTGTCC+CGG + chr4_2:56426501-56426520 Msa0609070:CDS 60.0%
CCCGGGACACTCATAACCCT+CGG - chr4_2:56426505-56426524 None:intergenic 60.0%
CCGAGGGTTATGAGTGTCCC+GGG + chr4_2:56426502-56426521 Msa0609070:CDS 60.0%
CGAGGGTTATGAGTGTCCCG+GGG + chr4_2:56426503-56426522 Msa0609070:CDS 60.0%
TGTCCCGGGGATTGTCTCAG+AGG + chr4_2:56426516-56426535 Msa0609070:CDS 60.0%
!! CCACCTCTGAGACAATCCCC+GGG - chr4_2:56426522-56426541 None:intergenic 60.0%
CGGATAGCCCCACTAAGCGA+TGG - chr4_2:56427872-56427891 None:intergenic 60.0%
CCGACCCCGATCCCATTGCT+GGG - chr4_2:56426453-56426472 None:intergenic 65.0%
CCCAGCAATGGGATCGGGGT+CGG + chr4_2:56426450-56426469 Msa0609070:CDS 65.0%
CCAGCAATGGGATCGGGGTC+GGG + chr4_2:56426451-56426470 Msa0609070:CDS 65.0%
CAGCAATGGGATCGGGGTCG+GGG + chr4_2:56426452-56426471 Msa0609070:CDS 65.0%
AATGGGATCGGGGTCGGGGA+GGG + chr4_2:56426456-56426475 Msa0609070:CDS 65.0%
CCCGGGGATTGTCTCAGAGG+TGG + chr4_2:56426519-56426538 Msa0609070:CDS 65.0%
CCGACCCCGATCCCATTGCT+GGG - chr4_2:56426453-56426472 None:intergenic 65.0%
CCCAGCAATGGGATCGGGGT+CGG + chr4_2:56426450-56426469 Msa0609070:CDS 65.0%
CCAGCAATGGGATCGGGGTC+GGG + chr4_2:56426451-56426470 Msa0609070:CDS 65.0%
CAGCAATGGGATCGGGGTCG+GGG + chr4_2:56426452-56426471 Msa0609070:CDS 65.0%
AATGGGATCGGGGTCGGGGA+GGG + chr4_2:56426456-56426475 Msa0609070:CDS 65.0%
CCCGGGGATTGTCTCAGAGG+TGG + chr4_2:56426519-56426538 Msa0609070:CDS 65.0%
CCCGACCCCGATCCCATTGC+TGG - chr4_2:56426454-56426473 None:intergenic 70.0%
CAATGGGATCGGGGTCGGGG+AGG + chr4_2:56426455-56426474 Msa0609070:CDS 70.0%
CCCGACCCCGATCCCATTGC+TGG - chr4_2:56426454-56426473 None:intergenic 70.0%
CAATGGGATCGGGGTCGGGG+AGG + chr4_2:56426455-56426474 Msa0609070:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 56426252 56428277 56426252 ID=Msa0609070;Name=Msa0609070
chr4_2 mRNA 56426252 56428277 56426252 ID=Msa0609070-mRNA-1;Parent=Msa0609070;Name=Msa0609070-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0.5|0.5|1|1|2|1284|215
chr4_2 exon 56426252 56426257 56426252 ID=Msa0609070-mRNA-1:exon:14504;Parent=Msa0609070-mRNA-1
chr4_2 exon 56426352 56428277 56426352 ID=Msa0609070-mRNA-1:exon:14505;Parent=Msa0609070-mRNA-1
chr4_2 CDS 56426252 56426257 56426252 ID=Msa0609070-mRNA-1:cds;Parent=Msa0609070-mRNA-1
chr4_2 CDS 56426352 56426993 56426352 ID=Msa0609070-mRNA-1:cds;Parent=Msa0609070-mRNA-1
chr4_2 three_prime_UTR 56426994 56428277 56426994 ID=Msa0609070-mRNA-1:three_prime_utr;Parent=Msa0609070-mRNA-1
Gene Sequence

>Msa0609070

ATGAGTAGTGTAGAGTTTTGTGGAGAACTGTGTATTTTTTGGAAGGACGTAAAGATGATGTCCAGATCGTATACAAACCTTTTAGATTTGGCTTCTGGGAATTTCCCAGCAATGGGATCGGGGTCGGGGAGGGAGTTTAAAGAACGAAGGCGGATGCCGAGGGTTATGAGTGTCCCGGGGATTGTCTCAGAGGTGGATGATGATCAGGCAGTAAGTGTTTCTTCGGATAATCCGTCAACTATTTCTTCTGATCGAATTATCATTGTAGCAAATCAGCTACCTTTGAAAGCTAAGAAAAGAGAGGACAACAAAGGGTGGAGTTTTAGTTGGAATGAGGATTCTTTGCTATTACAGCTTAAGGATGGATTTCCAGAAGATATGGAGGTTCTGTATGTTGGATCTTTGCGCGTTGACATTGATCCCGCTGAACAAGATGATGTATCACAGTATTTGCTGGAGAAATTCAAATGTGTCCCCACTTTTCTGCCTCCTGATGTTTTGGCAAACTTTTATGATGGCTTCTGCAAAAGGCAATTATGGCCACTTTTCATTACAAGTTACCGTTTTCAACTGATAAAAGCCACCGCTTTGATCGCCATTTGTGGGAAGCCTATGTTCTGGCAAACAAGCTGTTCTTTCAGAAGGTAG
Protein sequence

>Msa0609070

MSSVEFCGELCIFWKDVKMMSRSYTNLLDLASGNFPAMGSGSGREFKERRRMPRVMSVPGIVSEVDDDQAVSVSSDNPSTISSDRIIIVANQLPLKAKKREDNKGWSFSWNEDSLLLQLKDGFPEDMEVLYVGSLRVDIDPAEQDDVSQYLLEKFKCVPTFLPPDVLANFYDGFCKRQLWPLFITSYRFQLIKATALIAICGKPMFWQTSCSFRR*