Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0611080 | XP_013456861.1 | 98.160 | 652 | 12 | 0 | 1 | 652 | 1 | 652 | 0.0 | 1301 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0611080 | sp|Q9C9A6|PUB10_ARATH | 61.751 | 651 | 215 | 10 | 1 | 648 | 1 | 620 | 0.0 | 729 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0611080 | A0A072UML1 | 98.160 | 652 | 12 | 0 | 1 | 652 | 1 | 652 | 0.0 | 1301 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0611080 | Msa1408730 | 0.981652 | 4.096396e-153 | -8.615850e-47 |
Msa0575380 | Msa0611080 | 0.811945 | 5.429706e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0611080 | MtrunA17_Chr4g0044411 | 98.160 | 652 | 12 | 0 | 1 | 652 | 1 | 652 | 0.0 | 1301 |
Msa0611080 | MtrunA17_Chr4g0031431 | 44.844 | 640 | 293 | 11 | 39 | 651 | 25 | 631 | 3.60e-163 | 483 |
Msa0611080 | MtrunA17_Chr1g0199321 | 46.091 | 614 | 293 | 11 | 46 | 650 | 38 | 622 | 3.16e-157 | 466 |
Msa0611080 | MtrunA17_Chr7g0237931 | 52.255 | 377 | 171 | 3 | 272 | 646 | 236 | 605 | 1.77e-123 | 379 |
Msa0611080 | MtrunA17_Chr7g0248251 | 37.778 | 630 | 338 | 12 | 41 | 652 | 53 | 646 | 2.96e-116 | 361 |
Msa0611080 | MtrunA17_Chr5g0437411 | 46.310 | 393 | 194 | 6 | 273 | 648 | 293 | 685 | 1.77e-100 | 322 |
Msa0611080 | MtrunA17_Chr2g0284461 | 45.876 | 388 | 186 | 10 | 271 | 642 | 290 | 669 | 1.41e-86 | 286 |
Msa0611080 | MtrunA17_Chr7g0234671 | 37.750 | 400 | 233 | 9 | 257 | 649 | 62 | 452 | 2.43e-81 | 265 |
Msa0611080 | MtrunA17_Chr7g0275081 | 40.506 | 395 | 208 | 10 | 267 | 648 | 72 | 452 | 2.83e-78 | 256 |
Msa0611080 | MtrunA17_Chr1g0152561 | 47.826 | 276 | 144 | 0 | 373 | 648 | 61 | 336 | 2.22e-72 | 237 |
Msa0611080 | MtrunA17_Chr7g0261371 | 48.364 | 275 | 141 | 1 | 373 | 647 | 514 | 787 | 5.65e-69 | 239 |
Msa0611080 | MtrunA17_Chr7g0261371 | 54.651 | 86 | 37 | 1 | 263 | 348 | 233 | 316 | 6.11e-26 | 113 |
Msa0611080 | MtrunA17_Chr3g0106931 | 49.823 | 283 | 141 | 1 | 365 | 647 | 545 | 826 | 1.74e-68 | 239 |
Msa0611080 | MtrunA17_Chr3g0106931 | 51.765 | 85 | 41 | 0 | 262 | 346 | 222 | 306 | 2.70e-26 | 114 |
Msa0611080 | MtrunA17_Chr3g0134761 | 45.000 | 280 | 150 | 1 | 373 | 648 | 51 | 330 | 2.71e-67 | 223 |
Msa0611080 | MtrunA17_Chr1g0183781 | 46.182 | 275 | 147 | 1 | 373 | 647 | 440 | 713 | 3.24e-66 | 231 |
Msa0611080 | MtrunA17_Chr1g0183781 | 31.540 | 409 | 235 | 14 | 268 | 646 | 236 | 629 | 9.21e-36 | 143 |
Msa0611080 | MtrunA17_Chr4g0013091 | 32.000 | 650 | 364 | 23 | 39 | 648 | 87 | 698 | 5.81e-65 | 228 |
Msa0611080 | MtrunA17_Chr2g0290151 | 44.444 | 279 | 155 | 0 | 373 | 651 | 175 | 453 | 5.84e-63 | 216 |
Msa0611080 | MtrunA17_Chr4g0059201 | 28.393 | 641 | 403 | 15 | 41 | 651 | 93 | 707 | 2.18e-61 | 218 |
Msa0611080 | MtrunA17_Chr1g0189811 | 37.018 | 389 | 223 | 9 | 273 | 650 | 63 | 440 | 1.48e-59 | 206 |
Msa0611080 | MtrunA17_Chr3g0117851 | 32.061 | 393 | 214 | 11 | 272 | 651 | 274 | 626 | 3.98e-48 | 179 |
Msa0611080 | MtrunA17_Chr3g0122721 | 29.130 | 460 | 249 | 12 | 258 | 651 | 263 | 711 | 6.47e-46 | 174 |
Msa0611080 | MtrunA17_Chr5g0413681 | 35.411 | 401 | 222 | 13 | 275 | 651 | 282 | 669 | 1.45e-43 | 166 |
Msa0611080 | MtrunA17_Chr2g0280671 | 30.357 | 392 | 233 | 9 | 275 | 651 | 17 | 383 | 7.09e-36 | 139 |
Msa0611080 | MtrunA17_Chr8g0377151 | 27.397 | 438 | 245 | 9 | 274 | 648 | 283 | 710 | 1.17e-35 | 143 |
Msa0611080 | MtrunA17_Chr8g0377151 | 23.420 | 269 | 155 | 6 | 392 | 610 | 447 | 714 | 1.13e-11 | 68.2 |
Msa0611080 | MtrunA17_Chr3g0118001 | 32.491 | 277 | 182 | 2 | 374 | 647 | 212 | 486 | 2.71e-35 | 140 |
Msa0611080 | MtrunA17_Chr4g0044631 | 30.964 | 394 | 242 | 12 | 270 | 647 | 11 | 390 | 6.36e-34 | 134 |
Msa0611080 | MtrunA17_Chr3g0110121 | 26.000 | 400 | 261 | 11 | 269 | 646 | 32 | 418 | 7.46e-32 | 129 |
Msa0611080 | MtrunA17_Chr4g0048811 | 29.268 | 328 | 200 | 8 | 273 | 572 | 5 | 328 | 1.53e-29 | 119 |
Msa0611080 | MtrunA17_Chr1g0198984 | 49.123 | 114 | 56 | 1 | 286 | 399 | 1 | 112 | 2.26e-28 | 109 |
Msa0611080 | MtrunA17_Chr5g0429231 | 32.517 | 286 | 176 | 5 | 373 | 647 | 34 | 313 | 1.26e-26 | 111 |
Msa0611080 | MtrunA17_Chr5g0420471 | 26.961 | 408 | 248 | 16 | 271 | 644 | 23 | 414 | 2.12e-26 | 112 |
Msa0611080 | MtrunA17_Chr3g0137061 | 30.721 | 319 | 205 | 7 | 342 | 647 | 79 | 394 | 2.80e-26 | 113 |
Msa0611080 | MtrunA17_Chr5g0434171 | 24.495 | 396 | 269 | 11 | 271 | 646 | 33 | 418 | 4.12e-26 | 111 |
Msa0611080 | MtrunA17_Chr6g0479261 | 26.238 | 404 | 256 | 14 | 271 | 644 | 23 | 414 | 4.78e-26 | 111 |
Msa0611080 | MtrunA17_Chr6g0451581 | 27.481 | 262 | 182 | 3 | 385 | 643 | 253 | 509 | 2.38e-25 | 110 |
Msa0611080 | MtrunA17_Chr5g0400971 | 25.429 | 350 | 238 | 8 | 273 | 616 | 67 | 399 | 3.13e-25 | 109 |
Msa0611080 | MtrunA17_Chr8g0373031 | 51.282 | 78 | 38 | 0 | 271 | 348 | 273 | 350 | 2.11e-24 | 108 |
Msa0611080 | MtrunA17_Chr8g0384041 | 26.829 | 369 | 215 | 14 | 270 | 605 | 7 | 353 | 2.80e-24 | 105 |
Msa0611080 | MtrunA17_Chr5g0404311 | 48.864 | 88 | 45 | 0 | 261 | 348 | 261 | 348 | 3.34e-24 | 108 |
Msa0611080 | MtrunA17_Chr7g0267501 | 28.013 | 307 | 185 | 10 | 268 | 550 | 3 | 297 | 4.30e-24 | 105 |
Msa0611080 | MtrunA17_Chr1g0177261 | 27.302 | 315 | 171 | 9 | 277 | 547 | 11 | 311 | 2.31e-23 | 103 |
Msa0611080 | MtrunA17_Chr1g0149941 | 31.365 | 271 | 172 | 7 | 389 | 647 | 190 | 458 | 4.51e-23 | 103 |
Msa0611080 | MtrunA17_Chr1g0177281 | 27.619 | 315 | 170 | 9 | 277 | 547 | 11 | 311 | 5.30e-23 | 102 |
Msa0611080 | MtrunA17_Chr3g0129811 | 26.389 | 360 | 224 | 13 | 271 | 605 | 81 | 424 | 5.39e-23 | 102 |
Msa0611080 | MtrunA17_Chr1g0152291 | 28.818 | 347 | 215 | 10 | 273 | 606 | 45 | 372 | 1.06e-22 | 101 |
Msa0611080 | MtrunA17_Chr1g0199031 | 46.552 | 116 | 45 | 1 | 450 | 565 | 18 | 116 | 1.18e-22 | 94.0 |
Msa0611080 | MtrunA17_Chr1g0177271 | 25.359 | 418 | 247 | 14 | 277 | 644 | 11 | 413 | 6.86e-22 | 99.0 |
Msa0611080 | MtrunA17_Chr2g0278251 | 45.763 | 118 | 60 | 3 | 420 | 535 | 5 | 120 | 1.07e-20 | 89.4 |
Msa0611080 | MtrunA17_Chr8g0353271 | 29.167 | 288 | 186 | 8 | 373 | 643 | 8 | 294 | 2.10e-19 | 90.1 |
Msa0611080 | MtrunA17_Chr2g0322021 | 29.642 | 307 | 184 | 10 | 269 | 559 | 2 | 292 | 3.49e-19 | 90.5 |
Msa0611080 | MtrunA17_Chr3g0144071 | 25.294 | 340 | 186 | 8 | 273 | 545 | 30 | 368 | 5.05e-18 | 88.6 |
Msa0611080 | MtrunA17_Chr1g0177301 | 26.273 | 373 | 219 | 13 | 269 | 588 | 2 | 371 | 1.28e-17 | 85.5 |
Msa0611080 | MtrunA17_Chr1g0196911 | 28.571 | 231 | 132 | 6 | 233 | 440 | 462 | 682 | 7.19e-16 | 82.0 |
Msa0611080 | MtrunA17_Chr8g0390311 | 51.389 | 72 | 33 | 2 | 274 | 344 | 396 | 466 | 1.34e-15 | 81.3 |
Msa0611080 | MtrunA17_Chr5g0435041 | 28.514 | 249 | 129 | 6 | 405 | 647 | 92 | 297 | 2.75e-15 | 78.2 |
Msa0611080 | MtrunA17_Chr5g0412171 | 44.776 | 67 | 37 | 0 | 273 | 339 | 732 | 798 | 9.90e-15 | 77.8 |
Msa0611080 | MtrunA17_Chr8g0346441 | 24.793 | 363 | 229 | 9 | 275 | 604 | 261 | 612 | 3.46e-14 | 76.3 |
Msa0611080 | MtrunA17_Chr7g0275961 | 25.628 | 398 | 239 | 11 | 275 | 644 | 257 | 625 | 4.79e-14 | 75.9 |
Msa0611080 | MtrunA17_Chr1g0202971 | 45.455 | 66 | 36 | 0 | 274 | 339 | 649 | 714 | 1.04e-13 | 74.7 |
Msa0611080 | MtrunA17_Chr7g0247831 | 44.286 | 70 | 39 | 0 | 274 | 343 | 827 | 896 | 5.51e-13 | 72.4 |
Msa0611080 | MtrunA17_Chr4g0025501 | 30.065 | 153 | 91 | 6 | 271 | 419 | 4 | 144 | 5.79e-13 | 71.2 |
Msa0611080 | MtrunA17_Chr2g0328101 | 46.269 | 67 | 36 | 0 | 273 | 339 | 740 | 806 | 6.55e-13 | 72.0 |
Msa0611080 | MtrunA17_Chr3g0111451 | 30.576 | 278 | 154 | 7 | 372 | 648 | 80 | 319 | 1.70e-12 | 69.7 |
Msa0611080 | MtrunA17_Chr1g0199021 | 82.353 | 34 | 6 | 0 | 272 | 305 | 24 | 57 | 3.64e-12 | 61.6 |
Msa0611080 | MtrunA17_Chr7g0259851 | 28.571 | 217 | 151 | 3 | 371 | 584 | 183 | 398 | 5.74e-12 | 68.9 |
Msa0611080 | MtrunA17_Chr6g0449461 | 27.273 | 275 | 160 | 5 | 376 | 647 | 44 | 281 | 8.18e-12 | 67.0 |
Msa0611080 | MtrunA17_Chr4g0070941 | 41.667 | 72 | 41 | 1 | 268 | 339 | 686 | 756 | 1.06e-11 | 68.2 |
Msa0611080 | MtrunA17_Chr5g0394261 | 28.500 | 200 | 141 | 2 | 371 | 568 | 193 | 392 | 1.17e-11 | 68.2 |
Msa0611080 | MtrunA17_Chr7g0215741 | 27.749 | 191 | 134 | 2 | 366 | 552 | 551 | 741 | 1.94e-11 | 67.4 |
Msa0611080 | MtrunA17_Chr8g0367341 | 37.374 | 99 | 59 | 2 | 243 | 339 | 695 | 792 | 2.15e-11 | 67.4 |
Msa0611080 | MtrunA17_Chr1g0188041 | 22.649 | 521 | 341 | 20 | 117 | 594 | 99 | 600 | 5.08e-11 | 66.2 |
Msa0611080 | MtrunA17_Chr1g0205751 | 27.500 | 200 | 143 | 2 | 371 | 568 | 196 | 395 | 7.42e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0611080 | AT1G71020.1 | 61.751 | 651 | 215 | 10 | 1 | 648 | 1 | 620 | 0.0 | 729 |
Msa0611080 | AT1G23030.1 | 60.465 | 645 | 206 | 9 | 13 | 651 | 11 | 612 | 0.0 | 716 |
Msa0611080 | AT1G71020.2 | 65.638 | 486 | 149 | 6 | 165 | 648 | 3 | 472 | 0.0 | 595 |
Msa0611080 | AT3G46510.1 | 44.844 | 640 | 289 | 11 | 40 | 651 | 29 | 632 | 2.78e-162 | 481 |
Msa0611080 | AT3G54850.1 | 43.902 | 615 | 306 | 9 | 46 | 650 | 39 | 624 | 5.75e-148 | 443 |
Msa0611080 | AT2G28830.1 | 45.604 | 546 | 277 | 10 | 118 | 649 | 24 | 563 | 4.43e-141 | 424 |
Msa0611080 | AT5G42340.1 | 37.361 | 629 | 334 | 10 | 41 | 652 | 75 | 660 | 1.38e-112 | 353 |
Msa0611080 | AT1G29340.1 | 36.709 | 553 | 303 | 15 | 123 | 642 | 143 | 681 | 1.75e-80 | 270 |
Msa0611080 | AT3G07360.1 | 37.755 | 392 | 231 | 8 | 269 | 652 | 70 | 456 | 2.43e-76 | 251 |
Msa0611080 | AT2G23140.3 | 48.410 | 283 | 141 | 2 | 369 | 647 | 346 | 627 | 3.44e-71 | 243 |
Msa0611080 | AT2G23140.3 | 51.899 | 79 | 38 | 0 | 270 | 348 | 38 | 116 | 3.05e-25 | 111 |
Msa0611080 | AT2G23140.5 | 48.410 | 283 | 141 | 2 | 369 | 647 | 346 | 627 | 3.44e-71 | 243 |
Msa0611080 | AT2G23140.5 | 51.899 | 79 | 38 | 0 | 270 | 348 | 38 | 116 | 3.05e-25 | 111 |
Msa0611080 | AT2G23140.2 | 47.405 | 289 | 151 | 1 | 359 | 647 | 529 | 816 | 3.82e-70 | 244 |
Msa0611080 | AT2G23140.2 | 51.899 | 79 | 38 | 0 | 270 | 348 | 227 | 305 | 5.17e-25 | 111 |
Msa0611080 | AT2G23140.4 | 47.405 | 289 | 151 | 1 | 359 | 647 | 529 | 816 | 3.82e-70 | 244 |
Msa0611080 | AT2G23140.4 | 51.899 | 79 | 38 | 0 | 270 | 348 | 227 | 305 | 5.17e-25 | 111 |
Msa0611080 | AT2G23140.1 | 47.405 | 289 | 151 | 1 | 359 | 647 | 532 | 819 | 4.83e-70 | 243 |
Msa0611080 | AT2G23140.1 | 51.899 | 79 | 38 | 0 | 270 | 348 | 230 | 308 | 5.57e-25 | 111 |
Msa0611080 | AT5G67340.1 | 34.172 | 477 | 225 | 9 | 261 | 651 | 228 | 701 | 5.17e-70 | 241 |
Msa0611080 | AT5G67340.2 | 34.172 | 477 | 225 | 9 | 261 | 651 | 228 | 701 | 5.17e-70 | 241 |
Msa0611080 | AT3G01400.1 | 45.848 | 277 | 149 | 1 | 373 | 648 | 64 | 340 | 1.10e-67 | 225 |
Msa0611080 | AT5G01830.1 | 30.781 | 640 | 366 | 21 | 39 | 648 | 53 | 645 | 7.98e-65 | 226 |
Msa0611080 | AT5G58680.1 | 44.245 | 278 | 153 | 2 | 373 | 648 | 62 | 339 | 3.55e-64 | 216 |
Msa0611080 | AT5G18320.1 | 36.160 | 401 | 209 | 13 | 273 | 649 | 72 | 449 | 5.02e-59 | 205 |
Msa0611080 | AT3G54790.2 | 46.718 | 259 | 136 | 2 | 390 | 647 | 455 | 712 | 5.27e-59 | 211 |
Msa0611080 | AT3G54790.2 | 50.000 | 70 | 35 | 0 | 270 | 339 | 199 | 268 | 5.70e-19 | 92.0 |
Msa0611080 | AT3G54790.3 | 46.718 | 259 | 136 | 2 | 390 | 647 | 491 | 748 | 9.63e-59 | 211 |
Msa0611080 | AT3G54790.3 | 50.000 | 70 | 35 | 0 | 270 | 339 | 235 | 304 | 8.32e-19 | 91.3 |
Msa0611080 | AT3G54790.1 | 46.718 | 259 | 136 | 2 | 390 | 647 | 491 | 748 | 9.63e-59 | 211 |
Msa0611080 | AT3G54790.1 | 50.000 | 70 | 35 | 0 | 270 | 339 | 235 | 304 | 8.32e-19 | 91.3 |
Msa0611080 | AT4G16490.1 | 45.038 | 262 | 142 | 1 | 389 | 648 | 201 | 462 | 2.68e-56 | 198 |
Msa0611080 | AT1G27910.1 | 29.861 | 432 | 249 | 9 | 272 | 651 | 278 | 707 | 1.22e-46 | 177 |
Msa0611080 | AT1G24330.1 | 28.425 | 489 | 272 | 12 | 222 | 648 | 234 | 706 | 4.38e-46 | 175 |
Msa0611080 | AT1G24330.2 | 28.425 | 489 | 272 | 12 | 222 | 648 | 234 | 706 | 4.38e-46 | 175 |
Msa0611080 | AT1G67530.2 | 29.825 | 456 | 246 | 13 | 259 | 651 | 266 | 710 | 4.71e-44 | 169 |
Msa0611080 | AT1G67530.1 | 29.825 | 456 | 246 | 13 | 259 | 651 | 266 | 710 | 4.71e-44 | 169 |
Msa0611080 | AT1G67530.4 | 29.825 | 456 | 246 | 13 | 259 | 651 | 266 | 710 | 4.71e-44 | 169 |
Msa0611080 | AT3G07360.5 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.50e-43 | 159 |
Msa0611080 | AT3G07360.3 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.50e-43 | 159 |
Msa0611080 | AT3G07360.9 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.50e-43 | 159 |
Msa0611080 | AT3G07360.6 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.50e-43 | 159 |
Msa0611080 | AT3G07360.2 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.50e-43 | 159 |
Msa0611080 | AT3G07360.8 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.50e-43 | 159 |
Msa0611080 | AT3G07360.10 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.50e-43 | 159 |
Msa0611080 | AT3G07360.7 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.50e-43 | 159 |
Msa0611080 | AT3G07360.4 | 34.049 | 326 | 202 | 8 | 335 | 652 | 1 | 321 | 1.50e-43 | 159 |
Msa0611080 | AT4G21350.1 | 31.043 | 393 | 228 | 7 | 270 | 646 | 2 | 367 | 3.30e-41 | 154 |
Msa0611080 | AT5G18330.1 | 31.884 | 345 | 208 | 12 | 273 | 606 | 65 | 393 | 2.51e-39 | 150 |
Msa0611080 | AT1G60190.1 | 30.151 | 398 | 247 | 12 | 275 | 651 | 280 | 667 | 1.29e-37 | 149 |
Msa0611080 | AT3G19380.1 | 32.184 | 348 | 218 | 8 | 271 | 605 | 12 | 354 | 3.61e-37 | 144 |
Msa0611080 | AT1G49780.1 | 31.899 | 395 | 244 | 9 | 271 | 647 | 12 | 399 | 4.87e-36 | 140 |
Msa0611080 | AT1G10560.1 | 25.424 | 649 | 410 | 20 | 48 | 651 | 59 | 678 | 9.85e-36 | 144 |
Msa0611080 | AT5G18340.1 | 30.000 | 380 | 228 | 15 | 246 | 601 | 41 | 406 | 2.58e-35 | 139 |
Msa0611080 | AT5G62560.1 | 32.258 | 279 | 182 | 3 | 374 | 647 | 237 | 513 | 1.94e-33 | 135 |
Msa0611080 | AT5G40140.1 | 30.576 | 278 | 187 | 3 | 374 | 647 | 231 | 506 | 4.45e-31 | 128 |
Msa0611080 | AT5G65200.1 | 30.769 | 286 | 185 | 4 | 374 | 648 | 227 | 510 | 6.17e-31 | 128 |
Msa0611080 | AT5G37490.1 | 24.292 | 424 | 290 | 11 | 248 | 652 | 6 | 417 | 1.91e-27 | 116 |
Msa0611080 | AT2G35930.1 | 29.592 | 294 | 179 | 10 | 269 | 549 | 8 | 286 | 3.81e-26 | 112 |
Msa0611080 | AT4G31890.3 | 34.545 | 275 | 164 | 8 | 387 | 647 | 156 | 428 | 4.02e-26 | 113 |
Msa0611080 | AT4G31890.2 | 34.545 | 275 | 164 | 8 | 387 | 647 | 156 | 428 | 4.02e-26 | 113 |
Msa0611080 | AT4G31890.1 | 34.545 | 275 | 164 | 8 | 387 | 647 | 156 | 428 | 4.02e-26 | 113 |
Msa0611080 | AT5G65920.1 | 26.357 | 387 | 246 | 12 | 273 | 644 | 60 | 422 | 2.76e-25 | 109 |
Msa0611080 | AT5G65920.2 | 26.357 | 387 | 246 | 12 | 273 | 644 | 60 | 422 | 2.76e-25 | 109 |
Msa0611080 | AT3G47820.1 | 28.975 | 283 | 189 | 6 | 374 | 647 | 208 | 487 | 3.07e-24 | 107 |
Msa0611080 | AT1G66160.1 | 26.650 | 409 | 244 | 16 | 271 | 652 | 31 | 410 | 3.48e-24 | 106 |
Msa0611080 | AT3G49810.1 | 25.316 | 395 | 256 | 10 | 265 | 644 | 56 | 426 | 4.25e-24 | 106 |
Msa0611080 | AT1G67530.3 | 48.913 | 92 | 39 | 1 | 259 | 350 | 266 | 349 | 8.36e-24 | 106 |
Msa0611080 | AT4G12710.1 | 31.835 | 267 | 173 | 5 | 391 | 648 | 65 | 331 | 6.42e-23 | 102 |
Msa0611080 | AT1G08315.1 | 34.146 | 246 | 149 | 8 | 373 | 606 | 9 | 253 | 1.29e-22 | 99.8 |
Msa0611080 | AT5G09800.1 | 26.211 | 351 | 224 | 12 | 273 | 605 | 11 | 344 | 1.30e-21 | 98.2 |
Msa0611080 | AT5G64660.1 | 26.837 | 313 | 189 | 11 | 270 | 579 | 7 | 282 | 5.14e-21 | 96.7 |
Msa0611080 | AT3G52450.1 | 26.705 | 352 | 193 | 13 | 271 | 574 | 5 | 339 | 2.70e-20 | 94.7 |
Msa0611080 | AT2G25130.1 | 30.855 | 269 | 168 | 8 | 393 | 647 | 131 | 395 | 7.95e-20 | 93.6 |
Msa0611080 | AT3G18710.1 | 27.160 | 324 | 197 | 14 | 271 | 573 | 10 | 315 | 3.86e-18 | 87.8 |
Msa0611080 | AT3G03440.1 | 31.071 | 280 | 181 | 6 | 378 | 647 | 68 | 345 | 7.87e-18 | 86.7 |
Msa0611080 | AT4G36550.1 | 43.243 | 74 | 42 | 0 | 273 | 346 | 219 | 292 | 1.05e-16 | 84.7 |
Msa0611080 | AT1G66160.2 | 24.694 | 409 | 236 | 17 | 271 | 652 | 31 | 394 | 4.97e-15 | 78.2 |
Msa0611080 | AT3G11840.1 | 44.304 | 79 | 42 | 2 | 266 | 343 | 3 | 80 | 5.19e-15 | 78.6 |
Msa0611080 | AT1G76390.1 | 25.816 | 337 | 182 | 13 | 273 | 542 | 25 | 360 | 6.35e-15 | 79.0 |
Msa0611080 | AT1G76390.2 | 25.816 | 337 | 182 | 13 | 273 | 542 | 25 | 360 | 6.35e-15 | 79.0 |
Msa0611080 | AT1G01680.1 | 46.154 | 65 | 35 | 0 | 275 | 339 | 235 | 299 | 9.80e-15 | 75.9 |
Msa0611080 | AT2G45920.1 | 46.970 | 66 | 35 | 0 | 274 | 339 | 326 | 391 | 1.23e-14 | 76.6 |
Msa0611080 | AT5G50900.1 | 29.048 | 210 | 146 | 2 | 376 | 582 | 149 | 358 | 3.37e-14 | 76.3 |
Msa0611080 | AT1G01660.1 | 45.455 | 66 | 36 | 0 | 274 | 339 | 498 | 563 | 4.50e-14 | 75.9 |
Msa0611080 | AT1G01660.2 | 45.455 | 66 | 36 | 0 | 274 | 339 | 499 | 564 | 4.59e-14 | 75.9 |
Msa0611080 | AT1G56040.1 | 47.692 | 65 | 34 | 0 | 274 | 338 | 354 | 418 | 9.88e-14 | 74.3 |
Msa0611080 | AT3G61390.4 | 43.939 | 66 | 37 | 0 | 274 | 339 | 279 | 344 | 1.06e-13 | 73.6 |
Msa0611080 | AT3G61390.2 | 43.939 | 66 | 37 | 0 | 274 | 339 | 354 | 419 | 1.44e-13 | 73.9 |
Msa0611080 | AT5G65500.1 | 46.269 | 67 | 36 | 0 | 273 | 339 | 715 | 781 | 1.63e-13 | 74.3 |
Msa0611080 | AT5G65500.2 | 46.269 | 67 | 36 | 0 | 273 | 339 | 723 | 789 | 1.73e-13 | 74.3 |
Msa0611080 | AT5G57035.1 | 46.970 | 66 | 35 | 0 | 274 | 339 | 709 | 774 | 3.25e-13 | 73.6 |
Msa0611080 | AT3G20170.1 | 29.885 | 174 | 117 | 1 | 409 | 582 | 271 | 439 | 5.45e-13 | 72.0 |
Msa0611080 | AT1G01670.3 | 40.541 | 74 | 44 | 0 | 270 | 343 | 207 | 280 | 6.55e-13 | 70.1 |
Msa0611080 | AT1G01670.2 | 40.541 | 74 | 44 | 0 | 270 | 343 | 291 | 364 | 1.08e-12 | 70.5 |
Msa0611080 | AT1G01670.1 | 40.541 | 74 | 44 | 0 | 270 | 343 | 291 | 364 | 1.08e-12 | 70.5 |
Msa0611080 | AT2G45910.2 | 35.632 | 87 | 56 | 0 | 257 | 343 | 747 | 833 | 2.12e-12 | 70.9 |
Msa0611080 | AT2G45910.1 | 35.632 | 87 | 56 | 0 | 257 | 343 | 747 | 833 | 2.12e-12 | 70.9 |
Msa0611080 | AT5G13060.1 | 30.415 | 217 | 147 | 4 | 371 | 584 | 225 | 440 | 2.37e-12 | 70.9 |
Msa0611080 | AT1G20780.1 | 24.397 | 373 | 224 | 13 | 273 | 601 | 23 | 381 | 3.92e-12 | 70.1 |
Msa0611080 | AT1G20780.2 | 24.397 | 373 | 224 | 13 | 273 | 601 | 23 | 381 | 3.92e-12 | 70.1 |
Msa0611080 | AT1G20780.3 | 24.397 | 373 | 224 | 13 | 273 | 601 | 23 | 381 | 3.92e-12 | 70.1 |
Msa0611080 | AT1G56030.1 | 41.538 | 65 | 38 | 0 | 274 | 338 | 324 | 388 | 6.28e-12 | 68.6 |
Msa0611080 | AT2G44900.1 | 27.513 | 189 | 133 | 2 | 368 | 552 | 564 | 752 | 1.08e-11 | 68.9 |
Msa0611080 | AT2G44900.2 | 27.513 | 189 | 133 | 2 | 368 | 552 | 564 | 752 | 1.08e-11 | 68.9 |
Msa0611080 | AT2G19410.3 | 45.455 | 66 | 35 | 1 | 274 | 339 | 712 | 776 | 1.18e-11 | 68.6 |
Msa0611080 | AT2G19410.2 | 45.455 | 66 | 35 | 1 | 274 | 339 | 747 | 811 | 1.19e-11 | 68.6 |
Msa0611080 | AT2G19410.1 | 45.455 | 66 | 35 | 1 | 274 | 339 | 726 | 790 | 1.24e-11 | 68.6 |
Msa0611080 | AT1G68940.3 | 25.387 | 323 | 202 | 11 | 277 | 588 | 250 | 544 | 6.94e-11 | 66.2 |
Msa0611080 | AT1G68940.2 | 25.387 | 323 | 202 | 11 | 277 | 588 | 303 | 597 | 9.95e-11 | 65.9 |
Find 170 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAGAAATTTCTTGACTTTC+AGG | 0.038417 | 4_2:+59093331 | None:intergenic |
AGATAAATATATTAACTTTA+AGG | 0.166456 | 4_2:+59092001 | None:intergenic |
TCCCTCTAAGACTTCCATTT+TGG | 0.189510 | 4_2:+59092470 | None:intergenic |
CCTGAAAGTCAAGAAATTTC+TGG | 0.194581 | 4_2:-59093331 | Msa0611080:CDS |
ACGGAAGGCTACTTCATTAT+TGG | 0.201892 | 4_2:-59092074 | Msa0611080:CDS |
CCTATTGTCAGTGCTTCTTT+TGG | 0.240978 | 4_2:+59092786 | None:intergenic |
AGACTCCTTAGAACATAATT+TGG | 0.262335 | 4_2:+59093000 | None:intergenic |
TTACATCTTCTGAAGTTAAA+AGG | 0.270561 | 4_2:+59092722 | None:intergenic |
TCAGCGCGTGACGTGGAAAT+TGG | 0.296094 | 4_2:-59093823 | Msa0611080:CDS |
TGTGATGATCCCTGCCCTTA+TGG | 0.298109 | 4_2:+59092387 | None:intergenic |
TGATTTCTTGAGCCAGGGGC+TGG | 0.320586 | 4_2:+59093545 | None:intergenic |
AAACTGAAAGATAATCTTCT+TGG | 0.322536 | 4_2:+59093845 | None:intergenic |
TCACCGGCCATTGTATTTGC+TGG | 0.324513 | 4_2:+59094582 | None:intergenic |
GTTAAAAGGTTGACTAAAAC+TGG | 0.330673 | 4_2:+59092736 | None:intergenic |
TTACACCAAATTATGTTCTA+AGG | 0.332391 | 4_2:-59093005 | Msa0611080:CDS |
CAGTTTACCGTATGACGATT+TGG | 0.342582 | 4_2:-59093787 | Msa0611080:CDS |
CTCATTAGCTCCAACGATAT+AGG | 0.343106 | 4_2:+59093244 | None:intergenic |
TGGTGCCGTCATACCTCTTT+CGG | 0.345816 | 4_2:-59092128 | Msa0611080:CDS |
AGAGATTACGGAGCTGAATA+AGG | 0.352743 | 4_2:-59094394 | Msa0611080:CDS |
CTCAAAAGATCTATTAAAAC+TGG | 0.356638 | 4_2:+59092244 | None:intergenic |
TCCTCCTCCTGCGCACATTC+CGG | 0.357761 | 4_2:+59094509 | None:intergenic |
TTAGAACATAATTTGGTGTA+AGG | 0.358392 | 4_2:+59093007 | None:intergenic |
CTCCAAAATGGAAGTCTTAG+AGG | 0.362705 | 4_2:-59092472 | Msa0611080:CDS |
AAGGGACTTATTATGCTTGC+TGG | 0.364775 | 4_2:-59092643 | Msa0611080:CDS |
TCATTAGCTCCAACGATATA+GGG | 0.368285 | 4_2:+59093245 | None:intergenic |
TGGAAACCTTTGCCTCTTGA+TGG | 0.369775 | 4_2:+59092287 | None:intergenic |
TCATTTGTTCGAAGAGATTA+CGG | 0.373183 | 4_2:-59094406 | Msa0611080:CDS |
CGATTCTGCTTCGAGTTCTT+CGG | 0.376648 | 4_2:-59094367 | Msa0611080:CDS |
TTCAATTTATGTATATATCA+AGG | 0.380676 | 4_2:-59092424 | Msa0611080:CDS |
TTGGTAGATTTGCTCCAAAA+TGG | 0.381246 | 4_2:-59092484 | Msa0611080:CDS |
GAAAGAAGAAAAGAATTAAC+TGG | 0.381898 | 4_2:+59091891 | None:intergenic |
CTTGCACAAAGCAAGTAAAA+TGG | 0.385872 | 4_2:+59092186 | None:intergenic |
TGACCAGTGGCCACAATAAC+GGG | 0.386961 | 4_2:+59093217 | None:intergenic |
CAAGAAATCAGTCAGGTTCT+TGG | 0.388483 | 4_2:-59093532 | Msa0611080:CDS |
TATCCGTTGCTCGTCTCAAT+TGG | 0.397671 | 4_2:+59093611 | None:intergenic |
CGTTATTGTGGCCACTGGTC+AGG | 0.400672 | 4_2:-59093215 | Msa0611080:intron |
CGTCATACCTCTTTCGGAAC+TGG | 0.401096 | 4_2:-59092122 | Msa0611080:CDS |
CCAAAAGAAGCACTGACAAT+AGG | 0.425006 | 4_2:-59092786 | Msa0611080:CDS |
GATTTCTTGAGCCAGGGGCT+GGG | 0.426469 | 4_2:+59093546 | None:intergenic |
CTGAAAGTCAAGAAATTTCT+GGG | 0.428562 | 4_2:-59093330 | Msa0611080:CDS |
TGCTTCGAGTTCTTCGGTTA+CGG | 0.434500 | 4_2:-59094361 | Msa0611080:CDS |
CTCAGGAGCTATATCTGCTT+TGG | 0.437435 | 4_2:-59092503 | Msa0611080:CDS |
GAACAAGGGCAGAGCCATAA+GGG | 0.442885 | 4_2:-59092401 | Msa0611080:CDS |
GATGAGAACAAAATAATCAT+TGG | 0.443072 | 4_2:-59092529 | Msa0611080:CDS |
AAAATAATCATTGGAGCCTC+AGG | 0.443695 | 4_2:-59092520 | Msa0611080:CDS |
AACCTTTGCCTCTTGATGGC+TGG | 0.444911 | 4_2:+59092291 | None:intergenic |
CCTGACTGATTTCTTGAGCC+AGG | 0.449242 | 4_2:+59093539 | None:intergenic |
CGCTGATACAGAGGTTGAAA+AGG | 0.449352 | 4_2:+59091857 | None:intergenic |
ATAGGGCAAAGAAAATCTTC+AGG | 0.449853 | 4_2:+59093262 | None:intergenic |
CTCTCCTGTATCAGTAGACT+TGG | 0.451352 | 4_2:-59092148 | Msa0611080:CDS |
TGGAAGTCTTAGAGGGAAGA+AGG | 0.455734 | 4_2:-59092464 | Msa0611080:CDS |
CTGACCAGTGGCCACAATAA+CGG | 0.457070 | 4_2:+59093216 | None:intergenic |
CAAGAACTGACATTATTGTA+AGG | 0.458400 | 4_2:+59092314 | None:intergenic |
AACCGAGATCCTGCTGCAAA+CGG | 0.459758 | 4_2:+59093412 | None:intergenic |
CTGACCTGCAGGAAAGCTTC+CGG | 0.460846 | 4_2:+59092851 | None:intergenic |
TTTCCGTTGGTTAGTCCTGT+AGG | 0.462136 | 4_2:+59092940 | None:intergenic |
GAACATTGCATCGGCGGTGA+TGG | 0.464055 | 4_2:+59094473 | None:intergenic |
CAAACTGATCAGATCAATTG+AGG | 0.464066 | 4_2:-59091942 | Msa0611080:three_prime_UTR |
AGGATACTAATTGCTGAAGC+TGG | 0.467489 | 4_2:-59092766 | Msa0611080:CDS |
GGATCGTTCAGAGATGTTAC+AGG | 0.468224 | 4_2:-59092901 | Msa0611080:CDS |
GAGCTCCGGCGTGTTGTCTC+CGG | 0.469715 | 4_2:+59094554 | None:intergenic |
CTTTCGGAACTGGCTAGAAC+TGG | 0.469776 | 4_2:-59092112 | Msa0611080:CDS |
CTCGGAAGAAGTCAAAGAAC+AGG | 0.471166 | 4_2:-59093760 | Msa0611080:intron |
CTATATCGTTGGAGCTAATG+AGG | 0.476241 | 4_2:-59093243 | Msa0611080:CDS |
ACCGGAATGTGCGCAGGAGG+AGG | 0.478616 | 4_2:-59094510 | Msa0611080:CDS |
TGAATTAAGCACAGGAGCTC+CGG | 0.479194 | 4_2:+59094540 | None:intergenic |
GGAACAAGGGCAGAGCCATA+AGG | 0.479718 | 4_2:-59092402 | Msa0611080:CDS |
AGCTGCAACCCGTTTGCAGC+AGG | 0.482955 | 4_2:-59093421 | Msa0611080:CDS |
ACCCGTTTGCAGCAGGATCT+CGG | 0.482980 | 4_2:-59093414 | Msa0611080:CDS |
AGCATTCCTAAAAGCAATGA+AGG | 0.486039 | 4_2:-59093448 | Msa0611080:CDS |
AGAGATCCGGCGAACTAGAT+CGG | 0.487487 | 4_2:+59094437 | None:intergenic |
ACCGAGATCCTGCTGCAAAC+GGG | 0.489778 | 4_2:+59093413 | None:intergenic |
AGCTCGGAGGACTTGAACAA+TGG | 0.490269 | 4_2:+59092609 | None:intergenic |
CCTGAAAATCTATCGGAACT+AGG | 0.494469 | 4_2:-59093472 | Msa0611080:CDS |
GTCAAGAAATTTCTGGGAGT+GGG | 0.498309 | 4_2:-59093324 | Msa0611080:CDS |
ACACTCCTCAACTGACCTGC+AGG | 0.499381 | 4_2:+59092840 | None:intergenic |
AGTCAAGAAATTTCTGGGAG+TGG | 0.500581 | 4_2:-59093325 | Msa0611080:CDS |
TAATGAAGTAGCCTTCCGTT+TGG | 0.503664 | 4_2:+59092078 | None:intergenic |
GGCACCAAGTCTACTGATAC+AGG | 0.505124 | 4_2:+59092144 | None:intergenic |
TTTCGAATTCAGAGGATTCG+TGG | 0.507183 | 4_2:-59094338 | Msa0611080:CDS |
AGGTTGAAAAGGAACAATAC+AGG | 0.508421 | 4_2:+59091868 | None:intergenic |
CACAGATTCAAGCAAATCAA+TGG | 0.510591 | 4_2:-59092347 | Msa0611080:CDS |
AAGGGCAGAGCCATAAGGGC+AGG | 0.511128 | 4_2:-59092397 | Msa0611080:CDS |
AGACGAGCAACGGATAAATA+CGG | 0.513807 | 4_2:-59093604 | Msa0611080:CDS |
ATTGTTCAAGTCCTCCGAGC+TGG | 0.515684 | 4_2:-59092607 | Msa0611080:CDS |
GGAATGTGCGCAGGAGGAGG+AGG | 0.517669 | 4_2:-59094507 | Msa0611080:CDS |
TATTAAAACTGGTATAGTGC+TGG | 0.519102 | 4_2:+59092255 | None:intergenic |
TAGAACATAATTTGGTGTAA+GGG | 0.520468 | 4_2:+59093008 | None:intergenic |
TTCAGTTTCAGCGCGTGACG+TGG | 0.525877 | 4_2:-59093830 | Msa0611080:CDS |
TGCCAGCCATCAAGAGGCAA+AGG | 0.525971 | 4_2:-59092293 | Msa0611080:CDS |
GTTCTAGCCAGTTCCGAAAG+AGG | 0.528227 | 4_2:+59092115 | None:intergenic |
TTGGTGTAAGGGTCAAATGT+TGG | 0.530471 | 4_2:+59093019 | None:intergenic |
TCAATTTATGTATATATCAA+GGG | 0.531108 | 4_2:-59092423 | Msa0611080:CDS |
CGGAGGACTTGAACAATGGA+TGG | 0.531661 | 4_2:+59092613 | None:intergenic |
CGCCGATGCAATGTTCAGAA+AGG | 0.532617 | 4_2:-59094466 | Msa0611080:CDS |
TTGCTTCCATGGTTCCAGCT+CGG | 0.533674 | 4_2:+59092593 | None:intergenic |
CTGACTGATTTCTTGAGCCA+GGG | 0.534115 | 4_2:+59093540 | None:intergenic |
CACAACATCGAGCAACCTAC+AGG | 0.539474 | 4_2:-59092955 | Msa0611080:CDS |
TGTTCTCATCCGCAAGTGAA+AGG | 0.539476 | 4_2:+59092542 | None:intergenic |
CTTTCTGAACATTGCATCGG+CGG | 0.540344 | 4_2:+59094467 | None:intergenic |
CAGCAATTGAAACTCTCGTC+CGG | 0.543348 | 4_2:-59092870 | Msa0611080:CDS |
ATCCTTTCTGAACATTGCAT+CGG | 0.545375 | 4_2:+59094464 | None:intergenic |
TGCTTAATTCACGACATCAC+CGG | 0.546924 | 4_2:-59094528 | Msa0611080:CDS |
CCATTGTATTTGCTGGATTG+TGG | 0.547440 | 4_2:+59094589 | None:intergenic |
GTTGTCTCCGGCGAACTCAC+CGG | 0.547717 | 4_2:+59094566 | None:intergenic |
AACTTTACACGCTGATACAG+AGG | 0.552438 | 4_2:+59091848 | None:intergenic |
CATTGCATCGGCGGTGATGG+AGG | 0.554742 | 4_2:+59094476 | None:intergenic |
TCGTCCGGAAGCTTTCCTGC+AGG | 0.555944 | 4_2:-59092855 | Msa0611080:CDS |
GCTGCGTTCTCTTTGTTGCG+AGG | 0.556404 | 4_2:+59092211 | None:intergenic |
AGTCCTCCGAGCTGGAACCA+TGG | 0.557782 | 4_2:-59092599 | Msa0611080:CDS |
GCTTTCCTGCAGGTCAGTTG+AGG | 0.557800 | 4_2:-59092845 | Msa0611080:CDS |
CGATAAGGAAACCTCGGAAG+AGG | 0.558738 | 4_2:+59093366 | None:intergenic |
AATGAGTAAGAAGAGAGATC+CGG | 0.559409 | 4_2:+59094424 | None:intergenic |
GTTTGCAGCAGGATCTCGGT+TGG | 0.561113 | 4_2:-59093410 | Msa0611080:CDS |
ATGTATATATCAAGGGAACA+AGG | 0.561345 | 4_2:-59092416 | Msa0611080:CDS |
TAGCTGTCCTGAAAATCTAT+CGG | 0.562858 | 4_2:-59093479 | Msa0611080:CDS |
AACAAGACTAACAAATCAAG+AGG | 0.564368 | 4_2:+59091772 | None:intergenic |
AATCCAGCAAATACAATGGC+CGG | 0.565831 | 4_2:-59094585 | Msa0611080:exon |
GACGAGCAACGGATAAATAC+GGG | 0.566709 | 4_2:-59093603 | Msa0611080:CDS |
ATCGATCCATCTCTGTATGT+AGG | 0.566858 | 4_2:+59093080 | None:intergenic |
AAGAACTGACATTATTGTAA+GGG | 0.567464 | 4_2:+59092315 | None:intergenic |
GACATCACCGGAATGTGCGC+AGG | 0.567727 | 4_2:-59094516 | Msa0611080:CDS |
TTTACTTGCTTTGTGCAAGA+GGG | 0.567749 | 4_2:-59092182 | Msa0611080:CDS |
AATGAGGGATCCCGTTATTG+TGG | 0.571734 | 4_2:-59093227 | Msa0611080:CDS |
AGGAAACCTCGGAAGAGGCA+TGG | 0.571746 | 4_2:+59093371 | None:intergenic |
ATACAGAGATGGATCGATTG+TGG | 0.572889 | 4_2:-59093075 | Msa0611080:CDS |
ATTAACTGGATCAATGAGGC+TGG | 0.574702 | 4_2:+59091905 | None:intergenic |
TAAGGAGTCTTGTTTCTCAG+TGG | 0.575605 | 4_2:-59092987 | Msa0611080:CDS |
CCTGGCTCAAGAAATCAGTC+AGG | 0.580247 | 4_2:-59093539 | Msa0611080:CDS |
GTATGACGATTTGGATATCT+CGG | 0.583393 | 4_2:-59093778 | Msa0611080:CDS |
CTGGTACAGAGCGAGCCAAA+CGG | 0.590641 | 4_2:-59092093 | Msa0611080:CDS |
ATCACCGGAATGTGCGCAGG+AGG | 0.591840 | 4_2:-59094513 | Msa0611080:CDS |
TTTAATCGATAAGGAAACCT+CGG | 0.595093 | 4_2:+59093360 | None:intergenic |
TGATGTCGTGAATTAAGCAC+AGG | 0.596241 | 4_2:+59094532 | None:intergenic |
GATCCCGTTATTGTGGCCAC+TGG | 0.597895 | 4_2:-59093220 | Msa0611080:CDS |
TTCTATATATGAAAACAACA+AGG | 0.600201 | 4_2:-59092662 | Msa0611080:CDS |
AGTTCTTGCCAGCCATCAAG+AGG | 0.603879 | 4_2:-59092299 | Msa0611080:CDS |
CAAAGCAGATATAGCTCCTG+AGG | 0.605504 | 4_2:+59092504 | None:intergenic |
TGACTGATTTCTTGAGCCAG+GGG | 0.608554 | 4_2:+59093541 | None:intergenic |
TACAACAGCTTTGAAATGCG+AGG | 0.610979 | 4_2:-59092036 | Msa0611080:exon |
AGCGATCCTACATACAGAGA+TGG | 0.611283 | 4_2:-59093086 | Msa0611080:CDS |
CAGTTCCGAAAGAGGTATGA+CGG | 0.611470 | 4_2:+59092123 | None:intergenic |
TCCAAAATGGAAGTCTTAGA+GGG | 0.612631 | 4_2:-59092471 | Msa0611080:CDS |
GAGTATCCATGCCTCTTCCG+AGG | 0.613423 | 4_2:-59093377 | Msa0611080:CDS |
GTTCTTGGCAAATCTGTGAG+TGG | 0.616724 | 4_2:-59093517 | Msa0611080:CDS |
GAGATATCCAAATCGTCATA+CGG | 0.619518 | 4_2:+59093780 | None:intergenic |
GGTTGAAAAGGAACAATACA+GGG | 0.620210 | 4_2:+59091869 | None:intergenic |
AAGAGCAAGCACTAGATCAG+AGG | 0.622188 | 4_2:+59094314 | None:intergenic |
GGCTGGGATGAATCAAAAGA+CGG | 0.622684 | 4_2:+59093562 | None:intergenic |
GGTTACGGTTTCGAATTCAG+AGG | 0.625095 | 4_2:-59094346 | Msa0611080:CDS |
CTTCCATGGTTCCAGCTCGG+AGG | 0.625169 | 4_2:+59092596 | None:intergenic |
ATTGCACCGATCTAGTTCGC+CGG | 0.632440 | 4_2:-59094443 | Msa0611080:CDS |
CATGGAAGCAAGAGAAAACG+CGG | 0.632928 | 4_2:-59092581 | Msa0611080:CDS |
AGGGCAGAGCCATAAGGGCA+GGG | 0.634588 | 4_2:-59092396 | Msa0611080:CDS |
TATATCGTTGGAGCTAATGA+GGG | 0.638648 | 4_2:-59093242 | Msa0611080:CDS |
AAGTCAGAGAGAGTCTAATG+AGG | 0.639756 | 4_2:+59094614 | None:intergenic |
AAACCAATTGAGACGAGCAA+CGG | 0.643111 | 4_2:-59093614 | Msa0611080:CDS |
AAGAATTAACTGGATCAATG+AGG | 0.643213 | 4_2:+59091901 | None:intergenic |
TCTATATATGAAAACAACAA+GGG | 0.645718 | 4_2:-59092661 | Msa0611080:CDS |
TGTAATGACGCAAGAAAACG+CGG | 0.646941 | 4_2:-59092704 | Msa0611080:CDS |
GCATTCCTAAAAGCAATGAA+GGG | 0.647570 | 4_2:-59093447 | Msa0611080:CDS |
TGTATATATCAAGGGAACAA+GGG | 0.653092 | 4_2:-59092415 | Msa0611080:CDS |
ACAATGGCCGGTGAGTTCGC+CGG | 0.654301 | 4_2:-59094573 | Msa0611080:CDS |
TACAGAGCGAGCCAAACGGA+AGG | 0.654338 | 4_2:-59092089 | Msa0611080:CDS |
AGATTCTCAAGCATATAGCA+TGG | 0.658577 | 4_2:-59091728 | Msa0611080:three_prime_UTR |
CCACAATCCAGCAAATACAA+TGG | 0.669742 | 4_2:-59094589 | Msa0611080:exon |
CAACCTACAGGACTAACCAA+CGG | 0.675767 | 4_2:-59092943 | Msa0611080:CDS |
GATCTCGGTTGGAAAGAACA+AGG | 0.680183 | 4_2:-59093399 | Msa0611080:CDS |
AATGAACTTTACCTGACCAG+TGG | 0.705145 | 4_2:+59093204 | None:intergenic |
GTTCGCCGGAGACAACACGC+CGG | 0.804108 | 4_2:-59094559 | Msa0611080:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGATAAATATATTAACTTTA+AGG | + | chr4_2:59094417-59094436 | None:intergenic | 10.0% |
!! | ATTTGATATATCTTGATTTA+AGG | - | chr4_2:59092538-59092557 | Msa0611080:CDS | 15.0% |
!! | ACATAAAAAATAATGAAACA+AGG | + | chr4_2:59093292-59093311 | None:intergenic | 15.0% |
!! | TTCAATTTATGTATATATCA+AGG | - | chr4_2:59093991-59094010 | Msa0611080:intron | 15.0% |
!! | TCAATTTATGTATATATCAA+GGG | - | chr4_2:59093992-59094011 | Msa0611080:intron | 15.0% |
!!! | ATTTGGAATTTTACTAATGA+TGG | - | chr4_2:59092470-59092489 | Msa0611080:CDS | 20.0% |
!!! | GTTTTTTTTTTTTGTCCTTT+TGG | - | chr4_2:59092697-59092716 | Msa0611080:CDS | 20.0% |
!! | AAAAAATAATGAAACAAGGT+TGG | + | chr4_2:59093288-59093307 | None:intergenic | 20.0% |
!!! | TGTTGTTTTCATATATAGAA+AGG | + | chr4_2:59093753-59093772 | None:intergenic | 20.0% |
!! | TTCTATATATGAAAACAACA+AGG | - | chr4_2:59093753-59093772 | Msa0611080:intron | 20.0% |
!! | TCTATATATGAAAACAACAA+GGG | - | chr4_2:59093754-59093773 | Msa0611080:intron | 20.0% |
!!! | TGACATAATTTTTCATACAT+TGG | - | chr4_2:59094446-59094465 | Msa0611080:CDS | 20.0% |
!! | TTCTAAGAGATTGTGTAATT+TGG | - | chr4_2:59092453-59092472 | Msa0611080:CDS | 25.0% |
!!! | TACTAATGATGGATTTTGTA+CGG | - | chr4_2:59092481-59092500 | Msa0611080:CDS | 25.0% |
! | AAACTGAAAGATAATCTTCT+TGG | + | chr4_2:59092573-59092592 | None:intergenic | 25.0% |
!!! | TAGAACATAATTTGGTGTAA+GGG | + | chr4_2:59093410-59093429 | None:intergenic | 25.0% |
!!! | TTAGAACATAATTTGGTGTA+AGG | + | chr4_2:59093411-59093430 | None:intergenic | 25.0% |
! | TTACACCAAATTATGTTCTA+AGG | - | chr4_2:59093410-59093429 | Msa0611080:CDS | 25.0% |
!!! | ACTCTTTTTTATTTTTCCGT+TGG | + | chr4_2:59093491-59093510 | None:intergenic | 25.0% |
! | GGAAAAATAAAAAAGAGTGA+TGG | - | chr4_2:59093493-59093512 | Msa0611080:CDS | 25.0% |
!!! | TTACATCTTCTGAAGTTAAA+AGG | + | chr4_2:59093696-59093715 | None:intergenic | 25.0% |
! | GATGAGAACAAAATAATCAT+TGG | - | chr4_2:59093886-59093905 | Msa0611080:intron | 25.0% |
! | AAGAACTGACATTATTGTAA+GGG | + | chr4_2:59094103-59094122 | None:intergenic | 25.0% |
! | CTCAAAAGATCTATTAAAAC+TGG | + | chr4_2:59094174-59094193 | None:intergenic | 25.0% |
!!! | CAGTTTTAATAGATCTTTTG+AGG | - | chr4_2:59094172-59094191 | Msa0611080:intron | 25.0% |
! | GAAAGAAGAAAAGAATTAAC+TGG | + | chr4_2:59094527-59094546 | None:intergenic | 25.0% |
TCATTTGTTCGAAGAGATTA+CGG | - | chr4_2:59092009-59092028 | Msa0611080:three_prime_UTR | 30.0% | |
!!! | ACTAATGATGGATTTTGTAC+GGG | - | chr4_2:59092482-59092501 | Msa0611080:CDS | 30.0% |
AGGTAGAATTTGGTTAAATG+TGG | - | chr4_2:59092675-59092694 | Msa0611080:CDS | 30.0% | |
!! | CTGATATTGTCTACTTTTCT+AGG | - | chr4_2:59092765-59092784 | Msa0611080:CDS | 30.0% |
!! | ATATTGTCTACTTTTCTAGG+TGG | - | chr4_2:59092768-59092787 | Msa0611080:CDS | 30.0% |
TTTAATCGATAAGGAAACCT+CGG | + | chr4_2:59093058-59093077 | None:intergenic | 30.0% | |
CTGAAAGTCAAGAAATTTCT+GGG | - | chr4_2:59093085-59093104 | Msa0611080:CDS | 30.0% | |
! | GGTAAAGTTCATTTTAGATG+AGG | - | chr4_2:59093221-59093240 | Msa0611080:CDS | 30.0% |
AGACTCCTTAGAACATAATT+TGG | + | chr4_2:59093418-59093437 | None:intergenic | 30.0% | |
GTTAAAAGGTTGACTAAAAC+TGG | + | chr4_2:59093682-59093701 | None:intergenic | 30.0% | |
ATGTATATATCAAGGGAACA+AGG | - | chr4_2:59093999-59094018 | Msa0611080:intron | 30.0% | |
TGTATATATCAAGGGAACAA+GGG | - | chr4_2:59094000-59094019 | Msa0611080:intron | 30.0% | |
CAAGAACTGACATTATTGTA+AGG | + | chr4_2:59094104-59094123 | None:intergenic | 30.0% | |
TATTAAAACTGGTATAGTGC+TGG | + | chr4_2:59094163-59094182 | None:intergenic | 30.0% | |
!! | TTAATAGATCTTTTGAGGAC+TGG | - | chr4_2:59094177-59094196 | Msa0611080:intron | 30.0% |
AAGAATTAACTGGATCAATG+AGG | + | chr4_2:59094517-59094536 | None:intergenic | 30.0% | |
AACAAGACTAACAAATCAAG+AGG | + | chr4_2:59094646-59094665 | None:intergenic | 30.0% | |
! | GAGGTTTTTGATGAGACTTA+TGG | + | chr4_2:59091785-59091804 | None:intergenic | 35.0% |
ATCCTTTCTGAACATTGCAT+CGG | + | chr4_2:59091954-59091973 | None:intergenic | 35.0% | |
AATGAGTAAGAAGAGAGATC+CGG | + | chr4_2:59091994-59092013 | None:intergenic | 35.0% | |
!!! | AAGCTCGTTTTATTTGTCTG+TGG | - | chr4_2:59092197-59092216 | Msa0611080:CDS | 35.0% |
ACAAACAAATCGAAACGACA+AGG | + | chr4_2:59092310-59092329 | None:intergenic | 35.0% | |
GAGATATCCAAATCGTCATA+CGG | + | chr4_2:59092638-59092657 | None:intergenic | 35.0% | |
! | GTATGACGATTTGGATATCT+CGG | - | chr4_2:59092637-59092656 | Msa0611080:CDS | 35.0% |
GTCAAAGAACAGGTAGAATT+TGG | - | chr4_2:59092665-59092684 | Msa0611080:CDS | 35.0% | |
TACAGTATCGTCAATCCAAA+AGG | + | chr4_2:59092715-59092734 | None:intergenic | 35.0% | |
!! | TCTACTTTTCTAGGTGGATT+TGG | - | chr4_2:59092774-59092793 | Msa0611080:CDS | 35.0% |
TAGCTGTCCTGAAAATCTAT+CGG | - | chr4_2:59092936-59092955 | Msa0611080:CDS | 35.0% | |
AGCATTCCTAAAAGCAATGA+AGG | - | chr4_2:59092967-59092986 | Msa0611080:CDS | 35.0% | |
GCATTCCTAAAAGCAATGAA+GGG | - | chr4_2:59092968-59092987 | Msa0611080:CDS | 35.0% | |
!! | CTTTTCCCTTCATTGCTTTT+AGG | + | chr4_2:59092976-59092995 | None:intergenic | 35.0% |
!! | AGGAGCAGTTTTAATCGATA+AGG | + | chr4_2:59093067-59093086 | None:intergenic | 35.0% |
CCAGAAATTTCTTGACTTTC+AGG | + | chr4_2:59093087-59093106 | None:intergenic | 35.0% | |
CCTGAAAGTCAAGAAATTTC+TGG | - | chr4_2:59093084-59093103 | Msa0611080:CDS | 35.0% | |
ATAGGGCAAAGAAAATCTTC+AGG | + | chr4_2:59093156-59093175 | None:intergenic | 35.0% | |
! | TTTTCTTTGCCCTATATCGT+TGG | - | chr4_2:59093161-59093180 | Msa0611080:intron | 35.0% |
TCATTAGCTCCAACGATATA+GGG | + | chr4_2:59093173-59093192 | None:intergenic | 35.0% | |
TATATCGTTGGAGCTAATGA+GGG | - | chr4_2:59093173-59093192 | Msa0611080:intron | 35.0% | |
!! | TCTTTTTAGCCTTTCACTTG+CGG | - | chr4_2:59093864-59093883 | Msa0611080:intron | 35.0% |
AAAATAATCATTGGAGCCTC+AGG | - | chr4_2:59093895-59093914 | Msa0611080:intron | 35.0% | |
! | TTGGTAGATTTGCTCCAAAA+TGG | - | chr4_2:59093931-59093950 | Msa0611080:intron | 35.0% |
TCCAAAATGGAAGTCTTAGA+GGG | - | chr4_2:59093944-59093963 | Msa0611080:intron | 35.0% | |
CACAGATTCAAGCAAATCAA+TGG | - | chr4_2:59094068-59094087 | Msa0611080:intron | 35.0% | |
!!! | TATAGTGCTGGCTTTTACAA+TGG | + | chr4_2:59094151-59094170 | None:intergenic | 35.0% |
CTTGCACAAAGCAAGTAAAA+TGG | + | chr4_2:59094232-59094251 | None:intergenic | 35.0% | |
! | TTTTACTTGCTTTGTGCAAG+AGG | - | chr4_2:59094232-59094251 | Msa0611080:intron | 35.0% |
TTTACTTGCTTTGTGCAAGA+GGG | - | chr4_2:59094233-59094252 | Msa0611080:intron | 35.0% | |
CAAACTGATCAGATCAATTG+AGG | - | chr4_2:59094473-59094492 | Msa0611080:CDS | 35.0% | |
GGTTGAAAAGGAACAATACA+GGG | + | chr4_2:59094549-59094568 | None:intergenic | 35.0% | |
AGGTTGAAAAGGAACAATAC+AGG | + | chr4_2:59094550-59094569 | None:intergenic | 35.0% | |
AGATTCTCAAGCATATAGCA+TGG | - | chr4_2:59094687-59094706 | Msa0611080:five_prime_UTR | 35.0% | |
AAGTCAGAGAGAGTCTAATG+AGG | + | chr4_2:59091804-59091823 | None:intergenic | 40.0% | |
! | CCATTGTATTTGCTGGATTG+TGG | + | chr4_2:59091829-59091848 | None:intergenic | 40.0% |
CCACAATCCAGCAAATACAA+TGG | - | chr4_2:59091826-59091845 | Msa0611080:three_prime_UTR | 40.0% | |
AATCCAGCAAATACAATGGC+CGG | - | chr4_2:59091830-59091849 | Msa0611080:three_prime_UTR | 40.0% | |
TGATGTCGTGAATTAAGCAC+AGG | + | chr4_2:59091886-59091905 | None:intergenic | 40.0% | |
TGCTTAATTCACGACATCAC+CGG | - | chr4_2:59091887-59091906 | Msa0611080:three_prime_UTR | 40.0% | |
AGAGATTACGGAGCTGAATA+AGG | - | chr4_2:59092021-59092040 | Msa0611080:three_prime_UTR | 40.0% | |
TTTCGAATTCAGAGGATTCG+TGG | - | chr4_2:59092077-59092096 | Msa0611080:CDS | 40.0% | |
CAACATAGAGGAATACACAC+TGG | + | chr4_2:59092383-59092402 | None:intergenic | 40.0% | |
GTGTGTATTCCTCTATGTTG+TGG | - | chr4_2:59092383-59092402 | Msa0611080:CDS | 40.0% | |
CCAATACATCCACAACATAG+AGG | + | chr4_2:59092395-59092414 | None:intergenic | 40.0% | |
CCTCTATGTTGTGGATGTAT+TGG | - | chr4_2:59092392-59092411 | Msa0611080:CDS | 40.0% | |
CAGTTTACCGTATGACGATT+TGG | - | chr4_2:59092628-59092647 | Msa0611080:CDS | 40.0% | |
AAACCAATTGAGACGAGCAA+CGG | - | chr4_2:59092801-59092820 | Msa0611080:CDS | 40.0% | |
AGACGAGCAACGGATAAATA+CGG | - | chr4_2:59092811-59092830 | Msa0611080:CDS | 40.0% | |
CAAGAAATCAGTCAGGTTCT+TGG | - | chr4_2:59092883-59092902 | Msa0611080:CDS | 40.0% | |
! | CCTAGTTCCGATAGATTTTC+AGG | + | chr4_2:59092946-59092965 | None:intergenic | 40.0% |
CCTGAAAATCTATCGGAACT+AGG | - | chr4_2:59092943-59092962 | Msa0611080:CDS | 40.0% | |
! | AGTCAAGAAATTTCTGGGAG+TGG | - | chr4_2:59093090-59093109 | Msa0611080:CDS | 40.0% |
! | GTCAAGAAATTTCTGGGAGT+GGG | - | chr4_2:59093091-59093110 | Msa0611080:CDS | 40.0% |
!!! | GCATCACGCTTTTTAACTTC+AGG | + | chr4_2:59093123-59093142 | None:intergenic | 40.0% |
CTCATTAGCTCCAACGATAT+AGG | + | chr4_2:59093174-59093193 | None:intergenic | 40.0% | |
CTATATCGTTGGAGCTAATG+AGG | - | chr4_2:59093172-59093191 | Msa0611080:intron | 40.0% | |
AATGAACTTTACCTGACCAG+TGG | + | chr4_2:59093214-59093233 | None:intergenic | 40.0% | |
ATCGATCCATCTCTGTATGT+AGG | + | chr4_2:59093338-59093357 | None:intergenic | 40.0% | |
ATACAGAGATGGATCGATTG+TGG | - | chr4_2:59093340-59093359 | Msa0611080:CDS | 40.0% | |
TTGGTGTAAGGGTCAAATGT+TGG | + | chr4_2:59093399-59093418 | None:intergenic | 40.0% | |
!! | TAAGGAGTCTTGTTTCTCAG+TGG | - | chr4_2:59093428-59093447 | Msa0611080:CDS | 40.0% |
! | CCTATTGTCAGTGCTTCTTT+TGG | + | chr4_2:59093632-59093651 | None:intergenic | 40.0% |
!! | CCAAAAGAAGCACTGACAAT+AGG | - | chr4_2:59093629-59093648 | Msa0611080:CDS | 40.0% |
AGGATACTAATTGCTGAAGC+TGG | - | chr4_2:59093649-59093668 | Msa0611080:intron | 40.0% | |
TGTAATGACGCAAGAAAACG+CGG | - | chr4_2:59093711-59093730 | Msa0611080:intron | 40.0% | |
AAGGGACTTATTATGCTTGC+TGG | - | chr4_2:59093772-59093791 | Msa0611080:CDS | 40.0% | |
CTCCAAAATGGAAGTCTTAG+AGG | - | chr4_2:59093943-59093962 | Msa0611080:intron | 40.0% | |
!!! | TCCCTCTAAGACTTCCATTT+TGG | + | chr4_2:59093948-59093967 | None:intergenic | 40.0% |
TAATGAAGTAGCCTTCCGTT+TGG | + | chr4_2:59094340-59094359 | None:intergenic | 40.0% | |
ACGGAAGGCTACTTCATTAT+TGG | - | chr4_2:59094341-59094360 | Msa0611080:CDS | 40.0% | |
!! | TACAACAGCTTTGAAATGCG+AGG | - | chr4_2:59094379-59094398 | Msa0611080:CDS | 40.0% |
ATTAACTGGATCAATGAGGC+TGG | + | chr4_2:59094513-59094532 | None:intergenic | 40.0% | |
AACTTTACACGCTGATACAG+AGG | + | chr4_2:59094570-59094589 | None:intergenic | 40.0% | |
TGAATTAAGCACAGGAGCTC+CGG | + | chr4_2:59091878-59091897 | None:intergenic | 45.0% | |
CTTTCTGAACATTGCATCGG+CGG | + | chr4_2:59091951-59091970 | None:intergenic | 45.0% | |
! | CGATTCTGCTTCGAGTTCTT+CGG | - | chr4_2:59092048-59092067 | Msa0611080:CDS | 45.0% |
! | TGCTTCGAGTTCTTCGGTTA+CGG | - | chr4_2:59092054-59092073 | Msa0611080:CDS | 45.0% |
GGTTACGGTTTCGAATTCAG+AGG | - | chr4_2:59092069-59092088 | Msa0611080:CDS | 45.0% | |
AAGAGCAAGCACTAGATCAG+AGG | + | chr4_2:59092104-59092123 | None:intergenic | 45.0% | |
GACAAAATCTCAGTGGATCG+TGG | + | chr4_2:59092288-59092307 | None:intergenic | 45.0% | |
CGACAAGGACAAAATCTCAG+TGG | + | chr4_2:59092295-59092314 | None:intergenic | 45.0% | |
CGGGCGTGTATATCTGTAAA+AGG | - | chr4_2:59092501-59092520 | Msa0611080:CDS | 45.0% | |
CTCGGAAGAAGTCAAAGAAC+AGG | - | chr4_2:59092655-59092674 | Msa0611080:CDS | 45.0% | |
TATCCGTTGCTCGTCTCAAT+TGG | + | chr4_2:59092807-59092826 | None:intergenic | 45.0% | |
GACGAGCAACGGATAAATAC+GGG | - | chr4_2:59092812-59092831 | Msa0611080:CDS | 45.0% | |
GGCTGGGATGAATCAAAAGA+CGG | + | chr4_2:59092856-59092875 | None:intergenic | 45.0% | |
! | TGACTGATTTCTTGAGCCAG+GGG | + | chr4_2:59092877-59092896 | None:intergenic | 45.0% |
! | CTGACTGATTTCTTGAGCCA+GGG | + | chr4_2:59092878-59092897 | None:intergenic | 45.0% |
GTTCTTGGCAAATCTGTGAG+TGG | - | chr4_2:59092898-59092917 | Msa0611080:CDS | 45.0% | |
GATCTCGGTTGGAAAGAACA+AGG | - | chr4_2:59093016-59093035 | Msa0611080:CDS | 45.0% | |
AATGAGGGATCCCGTTATTG+TGG | - | chr4_2:59093188-59093207 | Msa0611080:intron | 45.0% | |
AGCGATCCTACATACAGAGA+TGG | - | chr4_2:59093329-59093348 | Msa0611080:CDS | 45.0% | |
CAACCTACAGGACTAACCAA+CGG | - | chr4_2:59093472-59093491 | Msa0611080:CDS | 45.0% | |
! | TTTCCGTTGGTTAGTCCTGT+AGG | + | chr4_2:59093478-59093497 | None:intergenic | 45.0% |
GGATCGTTCAGAGATGTTAC+AGG | - | chr4_2:59093514-59093533 | Msa0611080:CDS | 45.0% | |
CAGCAATTGAAACTCTCGTC+CGG | - | chr4_2:59093545-59093564 | Msa0611080:CDS | 45.0% | |
CATGGAAGCAAGAGAAAACG+CGG | - | chr4_2:59093834-59093853 | Msa0611080:CDS | 45.0% | |
TGTTCTCATCCGCAAGTGAA+AGG | + | chr4_2:59093876-59093895 | None:intergenic | 45.0% | |
CAAAGCAGATATAGCTCCTG+AGG | + | chr4_2:59093914-59093933 | None:intergenic | 45.0% | |
CTCAGGAGCTATATCTGCTT+TGG | - | chr4_2:59093912-59093931 | Msa0611080:intron | 45.0% | |
TGGAAGTCTTAGAGGGAAGA+AGG | - | chr4_2:59093951-59093970 | Msa0611080:intron | 45.0% | |
TGGAAACCTTTGCCTCTTGA+TGG | + | chr4_2:59094131-59094150 | None:intergenic | 45.0% | |
CTCTCCTGTATCAGTAGACT+TGG | - | chr4_2:59094267-59094286 | Msa0611080:CDS | 45.0% | |
! | CAGTTCCGAAAGAGGTATGA+CGG | + | chr4_2:59094295-59094314 | None:intergenic | 45.0% |
CGCTGATACAGAGGTTGAAA+AGG | + | chr4_2:59094561-59094580 | None:intergenic | 45.0% | |
TCACCGGCCATTGTATTTGC+TGG | + | chr4_2:59091836-59091855 | None:intergenic | 50.0% | |
CGCCGATGCAATGTTCAGAA+AGG | - | chr4_2:59091949-59091968 | Msa0611080:three_prime_UTR | 50.0% | |
! | ATTGCACCGATCTAGTTCGC+CGG | - | chr4_2:59091972-59091991 | Msa0611080:three_prime_UTR | 50.0% |
AGAGATCCGGCGAACTAGAT+CGG | + | chr4_2:59091981-59092000 | None:intergenic | 50.0% | |
!! | TTTTGATTCATCCCAGCCCC+TGG | - | chr4_2:59092858-59092877 | Msa0611080:CDS | 50.0% |
! | CCTGACTGATTTCTTGAGCC+AGG | + | chr4_2:59092879-59092898 | None:intergenic | 50.0% |
CCTGGCTCAAGAAATCAGTC+AGG | - | chr4_2:59092876-59092895 | Msa0611080:CDS | 50.0% | |
AACCGAGATCCTGCTGCAAA+CGG | + | chr4_2:59093006-59093025 | None:intergenic | 50.0% | |
CGATAAGGAAACCTCGGAAG+AGG | + | chr4_2:59093052-59093071 | None:intergenic | 50.0% | |
TGACCAGTGGCCACAATAAC+GGG | + | chr4_2:59093201-59093220 | None:intergenic | 50.0% | |
CTGACCAGTGGCCACAATAA+CGG | + | chr4_2:59093202-59093221 | None:intergenic | 50.0% | |
!! | CCTCTGCTGAGTTTTTGGAC+AGG | + | chr4_2:59093374-59093393 | None:intergenic | 50.0% |
CCTGTCCAAAAACTCAGCAG+AGG | - | chr4_2:59093371-59093390 | Msa0611080:CDS | 50.0% | |
! | TGGAGCCTCTGCTGAGTTTT+TGG | + | chr4_2:59093379-59093398 | None:intergenic | 50.0% |
CACAACATCGAGCAACCTAC+AGG | - | chr4_2:59093460-59093479 | Msa0611080:CDS | 50.0% | |
CGGAGGACTTGAACAATGGA+TGG | + | chr4_2:59093805-59093824 | None:intergenic | 50.0% | |
AGCTCGGAGGACTTGAACAA+TGG | + | chr4_2:59093809-59093828 | None:intergenic | 50.0% | |
ATTGTTCAAGTCCTCCGAGC+TGG | - | chr4_2:59093808-59093827 | Msa0611080:CDS | 50.0% | |
TTGCTTCCATGGTTCCAGCT+CGG | + | chr4_2:59093825-59093844 | None:intergenic | 50.0% | |
! | CGCGTTTTCTCTTGCTTCCA+TGG | + | chr4_2:59093836-59093855 | None:intergenic | 50.0% |
GAACAAGGGCAGAGCCATAA+GGG | - | chr4_2:59094014-59094033 | Msa0611080:intron | 50.0% | |
TGTGATGATCCCTGCCCTTA+TGG | + | chr4_2:59094031-59094050 | None:intergenic | 50.0% | |
AGTTCTTGCCAGCCATCAAG+AGG | - | chr4_2:59094116-59094135 | Msa0611080:intron | 50.0% | |
! | AACCTTTGCCTCTTGATGGC+TGG | + | chr4_2:59094127-59094146 | None:intergenic | 50.0% |
GGCACCAAGTCTACTGATAC+AGG | + | chr4_2:59094274-59094293 | None:intergenic | 50.0% | |
!! | TGGTGCCGTCATACCTCTTT+CGG | - | chr4_2:59094287-59094306 | Msa0611080:CDS | 50.0% |
CGTCATACCTCTTTCGGAAC+TGG | - | chr4_2:59094293-59094312 | Msa0611080:CDS | 50.0% | |
GTTCTAGCCAGTTCCGAAAG+AGG | + | chr4_2:59094303-59094322 | None:intergenic | 50.0% | |
CTTTCGGAACTGGCTAGAAC+TGG | - | chr4_2:59094303-59094322 | Msa0611080:CDS | 50.0% | |
! | GAACATTGCATCGGCGGTGA+TGG | + | chr4_2:59091945-59091964 | None:intergenic | 55.0% |
TTCAGTTTCAGCGCGTGACG+TGG | - | chr4_2:59092585-59092604 | Msa0611080:CDS | 55.0% | |
TCAGCGCGTGACGTGGAAAT+TGG | - | chr4_2:59092592-59092611 | Msa0611080:CDS | 55.0% | |
GATTTCTTGAGCCAGGGGCT+GGG | + | chr4_2:59092872-59092891 | None:intergenic | 55.0% | |
TGATTTCTTGAGCCAGGGGC+TGG | + | chr4_2:59092873-59092892 | None:intergenic | 55.0% | |
ACCCGTTTGCAGCAGGATCT+CGG | - | chr4_2:59093001-59093020 | Msa0611080:CDS | 55.0% | |
ACCGAGATCCTGCTGCAAAC+GGG | + | chr4_2:59093005-59093024 | None:intergenic | 55.0% | |
GTTTGCAGCAGGATCTCGGT+TGG | - | chr4_2:59093005-59093024 | Msa0611080:CDS | 55.0% | |
GAGTATCCATGCCTCTTCCG+AGG | - | chr4_2:59093038-59093057 | Msa0611080:CDS | 55.0% | |
AGGAAACCTCGGAAGAGGCA+TGG | + | chr4_2:59093047-59093066 | None:intergenic | 55.0% | |
GATCCCGTTATTGTGGCCAC+TGG | - | chr4_2:59093195-59093214 | Msa0611080:intron | 55.0% | |
CGTTATTGTGGCCACTGGTC+AGG | - | chr4_2:59093200-59093219 | Msa0611080:intron | 55.0% | |
CTGACCTGCAGGAAAGCTTC+CGG | + | chr4_2:59093567-59093586 | None:intergenic | 55.0% | |
GCTTTCCTGCAGGTCAGTTG+AGG | - | chr4_2:59093570-59093589 | Msa0611080:CDS | 55.0% | |
ACACTCCTCAACTGACCTGC+AGG | + | chr4_2:59093578-59093597 | None:intergenic | 55.0% | |
GGAACAAGGGCAGAGCCATA+AGG | - | chr4_2:59094013-59094032 | Msa0611080:intron | 55.0% | |
TGCCAGCCATCAAGAGGCAA+AGG | - | chr4_2:59094122-59094141 | Msa0611080:intron | 55.0% | |
GCTGCGTTCTCTTTGTTGCG+AGG | + | chr4_2:59094207-59094226 | None:intergenic | 55.0% | |
CTGGTACAGAGCGAGCCAAA+CGG | - | chr4_2:59094322-59094341 | Msa0611080:CDS | 55.0% | |
TACAGAGCGAGCCAAACGGA+AGG | - | chr4_2:59094326-59094345 | Msa0611080:CDS | 55.0% | |
ACAATGGCCGGTGAGTTCGC+CGG | - | chr4_2:59091842-59091861 | Msa0611080:three_prime_UTR | 60.0% | |
GTTGTCTCCGGCGAACTCAC+CGG | + | chr4_2:59091852-59091871 | None:intergenic | 60.0% | |
GACATCACCGGAATGTGCGC+AGG | - | chr4_2:59091899-59091918 | Msa0611080:three_prime_UTR | 60.0% | |
ATCACCGGAATGTGCGCAGG+AGG | - | chr4_2:59091902-59091921 | Msa0611080:three_prime_UTR | 60.0% | |
TCCTCCTCCTGCGCACATTC+CGG | + | chr4_2:59091909-59091928 | None:intergenic | 60.0% | |
! | CATTGCATCGGCGGTGATGG+AGG | + | chr4_2:59091942-59091961 | None:intergenic | 60.0% |
AGCTGCAACCCGTTTGCAGC+AGG | - | chr4_2:59092994-59093013 | Msa0611080:CDS | 60.0% | |
TCGTCCGGAAGCTTTCCTGC+AGG | - | chr4_2:59093560-59093579 | Msa0611080:CDS | 60.0% | |
AGTCCTCCGAGCTGGAACCA+TGG | - | chr4_2:59093816-59093835 | Msa0611080:CDS | 60.0% | |
CTTCCATGGTTCCAGCTCGG+AGG | + | chr4_2:59093822-59093841 | None:intergenic | 60.0% | |
AAGGGCAGAGCCATAAGGGC+AGG | - | chr4_2:59094018-59094037 | Msa0611080:intron | 60.0% | |
AGGGCAGAGCCATAAGGGCA+GGG | - | chr4_2:59094019-59094038 | Msa0611080:intron | 60.0% | |
GTTCGCCGGAGACAACACGC+CGG | - | chr4_2:59091856-59091875 | Msa0611080:three_prime_UTR | 65.0% | |
GAGCTCCGGCGTGTTGTCTC+CGG | + | chr4_2:59091864-59091883 | None:intergenic | 65.0% | |
ACCGGAATGTGCGCAGGAGG+AGG | - | chr4_2:59091905-59091924 | Msa0611080:three_prime_UTR | 65.0% | |
GGAATGTGCGCAGGAGGAGG+AGG | - | chr4_2:59091908-59091927 | Msa0611080:three_prime_UTR | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 59091718 | 59094719 | 59091718 | ID=Msa0611080;Name=Msa0611080 |
chr4_2 | mRNA | 59091718 | 59094719 | 59091718 | ID=Msa0611080-mRNA-1;Parent=Msa0611080;Name=Msa0611080-mRNA-1;_AED=0.03;_eAED=0.03;_QI=127|1|1|1|1|1|4|327|652 |
chr4_2 | exon | 59091718 | 59093115 | 59091718 | ID=Msa0611080-mRNA-1:exon:15678;Parent=Msa0611080-mRNA-1 |
chr4_2 | exon | 59093216 | 59093650 | 59093216 | ID=Msa0611080-mRNA-1:exon:15677;Parent=Msa0611080-mRNA-1 |
chr4_2 | exon | 59093761 | 59093877 | 59093761 | ID=Msa0611080-mRNA-1:exon:15676;Parent=Msa0611080-mRNA-1 |
chr4_2 | exon | 59094257 | 59094719 | 59094257 | ID=Msa0611080-mRNA-1:exon:15675;Parent=Msa0611080-mRNA-1 |
chr4_2 | five_prime_UTR | 59094593 | 59094719 | 59094593 | ID=Msa0611080-mRNA-1:five_prime_utr;Parent=Msa0611080-mRNA-1 |
chr4_2 | CDS | 59094257 | 59094592 | 59094257 | ID=Msa0611080-mRNA-1:cds;Parent=Msa0611080-mRNA-1 |
chr4_2 | CDS | 59093761 | 59093877 | 59093761 | ID=Msa0611080-mRNA-1:cds;Parent=Msa0611080-mRNA-1 |
chr4_2 | CDS | 59093216 | 59093650 | 59093216 | ID=Msa0611080-mRNA-1:cds;Parent=Msa0611080-mRNA-1 |
chr4_2 | CDS | 59092045 | 59093115 | 59092045 | ID=Msa0611080-mRNA-1:cds;Parent=Msa0611080-mRNA-1 |
chr4_2 | three_prime_UTR | 59091718 | 59092044 | 59091718 | ID=Msa0611080-mRNA-1:three_prime_utr;Parent=Msa0611080-mRNA-1 |
Gene Sequence |
Protein sequence |