Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575380 | XP_003631048.1 | 99.662 | 296 | 1 | 0 | 1 | 296 | 1 | 296 | 0.0 | 606 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575380 | G7LCF7 | 99.662 | 296 | 1 | 0 | 1 | 296 | 1 | 296 | 0.0 | 606 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001800 | Msa0575380 | 0.820612 | 6.257106e-53 | -8.615850e-47 |
| Msa0004340 | Msa0575380 | -0.800062 | 1.718552e-48 | -8.615850e-47 |
| Msa0009530 | Msa0575380 | -0.819660 | 1.033763e-52 | -8.615850e-47 |
| Msa0012380 | Msa0575380 | -0.829379 | 5.318813e-55 | -8.615850e-47 |
| Msa0013270 | Msa0575380 | 0.814472 | 1.514351e-51 | -8.615850e-47 |
| Msa0014590 | Msa0575380 | 0.811119 | 8.211971e-51 | -8.615850e-47 |
| Msa0017710 | Msa0575380 | 0.812692 | 3.729759e-51 | -8.615850e-47 |
| Msa0024500 | Msa0575380 | -0.823131 | 1.634017e-53 | -8.615850e-47 |
| Msa0024650 | Msa0575380 | 0.809274 | 2.051610e-50 | -8.615850e-47 |
| Msa0025570 | Msa0575380 | 0.806686 | 7.292372e-50 | -8.615850e-47 |
| Msa0026700 | Msa0575380 | 0.811443 | 6.983706e-51 | -8.615850e-47 |
| Msa0027030 | Msa0575380 | -0.816108 | 6.553351e-52 | -8.615850e-47 |
| Msa0030090 | Msa0575380 | 0.814004 | 1.921371e-51 | -8.615850e-47 |
| Msa0037270 | Msa0575380 | -0.867914 | 9.626263e-66 | -8.615850e-47 |
| Msa0044780 | Msa0575380 | -0.820216 | 7.710672e-53 | -8.615850e-47 |
| Msa0045810 | Msa0575380 | 0.802567 | 5.276946e-49 | -8.615850e-47 |
| Msa0046050 | Msa0575380 | -0.815139 | 1.077092e-51 | -8.615850e-47 |
| Msa0046200 | Msa0575380 | 0.819123 | 1.370139e-52 | -8.615850e-47 |
| Msa0046970 | Msa0575380 | 0.828566 | 8.374800e-55 | -8.615850e-47 |
| Msa0063540 | Msa0575380 | 0.802250 | 6.132799e-49 | -8.615850e-47 |
| Msa0065400 | Msa0575380 | -0.800035 | 1.740912e-48 | -8.615850e-47 |
| Msa0065520 | Msa0575380 | -0.851329 | 9.529549e-61 | -8.615850e-47 |
| Msa0072390 | Msa0575380 | -0.880701 | 4.420666e-70 | -8.615850e-47 |
| Msa0073110 | Msa0575380 | 0.807634 | 4.592716e-50 | -8.615850e-47 |
| Msa0081120 | Msa0575380 | -0.878121 | 3.627674e-69 | -8.615850e-47 |
| Msa0081790 | Msa0575380 | -0.817880 | 2.621283e-52 | -8.615850e-47 |
| Msa0086620 | Msa0575380 | -0.816461 | 5.465945e-52 | -8.615850e-47 |
| Msa0106540 | Msa0575380 | 0.811935 | 5.459176e-51 | -8.615850e-47 |
| Msa0111730 | Msa0575380 | 0.804380 | 2.221249e-49 | -8.615850e-47 |
| Msa0120450 | Msa0575380 | 0.814665 | 1.372683e-51 | -8.615850e-47 |
| Msa0121320 | Msa0575380 | 0.802213 | 6.242583e-49 | -8.615850e-47 |
| Msa0125600 | Msa0575380 | 0.840869 | 6.704431e-58 | -8.615850e-47 |
| Msa0128110 | Msa0575380 | -0.802663 | 5.041121e-49 | -8.615850e-47 |
| Msa0132080 | Msa0575380 | -0.804119 | 2.516980e-49 | -8.615850e-47 |
| Msa0135330 | Msa0575380 | 0.815639 | 8.337635e-52 | -8.615850e-47 |
| Msa0137010 | Msa0575380 | -0.858650 | 7.122196e-63 | -8.615850e-47 |
| Msa0143590 | Msa0575380 | 0.805881 | 1.077490e-49 | -8.615850e-47 |
| Msa0145200 | Msa0575380 | 0.811880 | 5.611007e-51 | -8.615850e-47 |
| Msa0157030 | Msa0575380 | -0.845698 | 3.453557e-59 | -8.615850e-47 |
| Msa0163960 | Msa0575380 | -0.866963 | 1.941121e-65 | -8.615850e-47 |
| Msa0167150 | Msa0575380 | -0.806820 | 6.831711e-50 | -8.615850e-47 |
| Msa0170080 | Msa0575380 | 0.809277 | 2.049108e-50 | -8.615850e-47 |
| Msa0179830 | Msa0575380 | 0.854157 | 1.483450e-61 | -8.615850e-47 |
| Msa0180100 | Msa0575380 | -0.805497 | 1.297374e-49 | -8.615850e-47 |
| Msa0186510 | Msa0575380 | -0.834035 | 3.782297e-56 | -8.615850e-47 |
| Msa0187980 | Msa0575380 | -0.815210 | 1.038928e-51 | -8.615850e-47 |
| Msa0193680 | Msa0575380 | 0.837824 | 4.138734e-57 | -8.615850e-47 |
| Msa0195140 | Msa0575380 | -0.808127 | 3.607361e-50 | -8.615850e-47 |
| Msa0207680 | Msa0575380 | 0.853793 | 1.888724e-61 | -8.615850e-47 |
| Msa0207690 | Msa0575380 | 0.815502 | 8.945615e-52 | -8.615850e-47 |
| Msa0209360 | Msa0575380 | 0.847045 | 1.482028e-59 | -8.615850e-47 |
| Msa0216360 | Msa0575380 | 0.817724 | 2.842768e-52 | -8.615850e-47 |
| Msa0225070 | Msa0575380 | -0.822303 | 2.545816e-53 | -8.615850e-47 |
| Msa0234150 | Msa0575380 | 0.812186 | 4.812091e-51 | -8.615850e-47 |
| Msa0364910 | Msa0575380 | -0.825747 | 3.959881e-54 | -8.615850e-47 |
| Msa0367590 | Msa0575380 | -0.827256 | 1.729629e-54 | -8.615850e-47 |
| Msa0369100 | Msa0575380 | -0.827817 | 1.268391e-54 | -8.615850e-47 |
| Msa0371510 | Msa0575380 | 0.839965 | 1.155809e-57 | -8.615850e-47 |
| Msa0373050 | Msa0575380 | 0.842831 | 2.033032e-58 | -8.615850e-47 |
| Msa0373060 | Msa0575380 | 0.833907 | 4.072352e-56 | -8.615850e-47 |
| Msa0375570 | Msa0575380 | -0.830386 | 3.024458e-55 | -8.615850e-47 |
| Msa0380980 | Msa0575380 | 0.858885 | 6.056620e-63 | -8.615850e-47 |
| Msa0381100 | Msa0575380 | 0.869030 | 4.200105e-66 | -8.615850e-47 |
| Msa0382020 | Msa0575380 | -0.814412 | 1.561373e-51 | -8.615850e-47 |
| Msa0382460 | Msa0575380 | 0.847300 | 1.262109e-59 | -8.615850e-47 |
| Msa0385770 | Msa0575380 | -0.832255 | 1.048985e-55 | -8.615850e-47 |
| Msa0386880 | Msa0575380 | 0.834714 | 2.554926e-56 | -8.615850e-47 |
| Msa0403740 | Msa0575380 | -0.818097 | 2.341993e-52 | -8.615850e-47 |
| Msa0404060 | Msa0575380 | -0.846694 | 1.849263e-59 | -8.615850e-47 |
| Msa0404070 | Msa0575380 | -0.889284 | 2.780781e-73 | -8.615850e-47 |
| Msa0412580 | Msa0575380 | -0.827733 | 1.329121e-54 | -8.615850e-47 |
| Msa0419730 | Msa0575380 | 0.824750 | 6.813951e-54 | -8.615850e-47 |
| Msa0419860 | Msa0575380 | 0.829400 | 5.257394e-55 | -8.615850e-47 |
| Msa0421580 | Msa0575380 | 0.821517 | 3.870803e-53 | -8.615850e-47 |
| Msa0424220 | Msa0575380 | -0.831453 | 1.655026e-55 | -8.615850e-47 |
| Msa0424540 | Msa0575380 | 0.822993 | 1.759522e-53 | -8.615850e-47 |
| Msa0428300 | Msa0575380 | -0.811701 | 6.137130e-51 | -8.615850e-47 |
| Msa0428330 | Msa0575380 | -0.826255 | 2.998474e-54 | -8.615850e-47 |
| Msa0430040 | Msa0575380 | -0.801288 | 9.664237e-49 | -8.615850e-47 |
| Msa0434090 | Msa0575380 | 0.814598 | 1.420125e-51 | -8.615850e-47 |
| Msa0437550 | Msa0575380 | -0.815203 | 1.042705e-51 | -8.615850e-47 |
| Msa0437790 | Msa0575380 | -0.817596 | 3.037712e-52 | -8.615850e-47 |
| Msa0442260 | Msa0575380 | 0.808513 | 2.984384e-50 | -8.615850e-47 |
| Msa0449500 | Msa0575380 | 0.809076 | 2.261955e-50 | -8.615850e-47 |
| Msa0450030 | Msa0575380 | 0.835266 | 1.855054e-56 | -8.615850e-47 |
| Msa0454160 | Msa0575380 | 0.809092 | 2.244161e-50 | -8.615850e-47 |
| Msa0456450 | Msa0575380 | -0.828115 | 1.075668e-54 | -8.615850e-47 |
| Msa0457070 | Msa0575380 | -0.844937 | 5.548392e-59 | -8.615850e-47 |
| Msa0460220 | Msa0575380 | -0.806741 | 7.099984e-50 | -8.615850e-47 |
| Msa0467170 | Msa0575380 | 0.853810 | 1.868027e-61 | -8.615850e-47 |
| Msa0467330 | Msa0575380 | 0.853560 | 2.203799e-61 | -8.615850e-47 |
| Msa0467600 | Msa0575380 | 0.815075 | 1.113050e-51 | -8.615850e-47 |
| Msa0469770 | Msa0575380 | -0.804030 | 2.627429e-49 | -8.615850e-47 |
| Msa0471130 | Msa0575380 | -0.830014 | 3.727040e-55 | -8.615850e-47 |
| Msa0476960 | Msa0575380 | 0.837392 | 5.342349e-57 | -8.615850e-47 |
| Msa0477900 | Msa0575380 | 0.830109 | 3.533027e-55 | -8.615850e-47 |
| Msa0240590 | Msa0575380 | -0.809860 | 1.535471e-50 | -8.615850e-47 |
| Msa0242820 | Msa0575380 | 0.815268 | 1.008584e-51 | -8.615850e-47 |
| Msa0253160 | Msa0575380 | -0.822505 | 2.285716e-53 | -8.615850e-47 |
| Msa0255770 | Msa0575380 | -0.815766 | 7.811743e-52 | -8.615850e-47 |
| Msa0256540 | Msa0575380 | 0.813883 | 2.042764e-51 | -8.615850e-47 |
| Msa0256550 | Msa0575380 | 0.845248 | 4.571734e-59 | -8.615850e-47 |
| Msa0261400 | Msa0575380 | 0.803507 | 3.372934e-49 | -8.615850e-47 |
| Msa0266140 | Msa0575380 | -0.818652 | 1.752867e-52 | -8.615850e-47 |
| Msa0267450 | Msa0575380 | -0.829954 | 3.854150e-55 | -8.615850e-47 |
| Msa0267510 | Msa0575380 | -0.832347 | 9.954269e-56 | -8.615850e-47 |
| Msa0269240 | Msa0575380 | 0.849191 | 3.788495e-60 | -8.615850e-47 |
| Msa0274570 | Msa0575380 | 0.828693 | 7.799974e-55 | -8.615850e-47 |
| Msa0279090 | Msa0575380 | -0.801584 | 8.403683e-49 | -8.615850e-47 |
| Msa0279810 | Msa0575380 | 0.829787 | 4.234608e-55 | -8.615850e-47 |
| Msa0287480 | Msa0575380 | 0.811316 | 7.442110e-51 | -8.615850e-47 |
| Msa0287640 | Msa0575380 | 0.840150 | 1.034177e-57 | -8.615850e-47 |
| Msa0287660 | Msa0575380 | 0.826409 | 2.756204e-54 | -8.615850e-47 |
| Msa0291940 | Msa0575380 | -0.830366 | 3.057739e-55 | -8.615850e-47 |
| Msa0295680 | Msa0575380 | 0.825960 | 3.525556e-54 | -8.615850e-47 |
| Msa0299030 | Msa0575380 | 0.816576 | 5.150955e-52 | -8.615850e-47 |
| Msa0303920 | Msa0575380 | 0.816463 | 5.458853e-52 | -8.615850e-47 |
| Msa0304060 | Msa0575380 | -0.821308 | 4.325738e-53 | -8.615850e-47 |
| Msa0306160 | Msa0575380 | -0.840329 | 9.287266e-58 | -8.615850e-47 |
| Msa0307630 | Msa0575380 | 0.807112 | 5.927457e-50 | -8.615850e-47 |
| Msa0319220 | Msa0575380 | 0.826278 | 2.961075e-54 | -8.615850e-47 |
| Msa0334310 | Msa0575380 | 0.801907 | 7.213545e-49 | -8.615850e-47 |
| Msa0334320 | Msa0575380 | 0.816859 | 4.449109e-52 | -8.615850e-47 |
| Msa0347660 | Msa0575380 | 0.811073 | 8.402729e-51 | -8.615850e-47 |
| Msa0353500 | Msa0575380 | 0.828725 | 7.662620e-55 | -8.615850e-47 |
| Msa0354600 | Msa0575380 | 0.813780 | 2.152895e-51 | -8.615850e-47 |
| Msa0364030 | Msa0575380 | -0.818815 | 1.609717e-52 | -8.615850e-47 |
| Msa0485210 | Msa0575380 | -0.811457 | 6.935906e-51 | -8.615850e-47 |
| Msa0494950 | Msa0575380 | 0.804131 | 2.503349e-49 | -8.615850e-47 |
| Msa0502970 | Msa0575380 | 0.820452 | 6.810170e-53 | -8.615850e-47 |
| Msa0504360 | Msa0575380 | -0.807225 | 5.608544e-50 | -8.615850e-47 |
| Msa0508780 | Msa0575380 | -0.804738 | 1.870475e-49 | -8.615850e-47 |
| Msa0518530 | Msa0575380 | 0.808943 | 2.415785e-50 | -8.615850e-47 |
| Msa0519070 | Msa0575380 | -0.812275 | 4.600661e-51 | -8.615850e-47 |
| Msa0524830 | Msa0575380 | -0.812699 | 3.718196e-51 | -8.615850e-47 |
| Msa0525180 | Msa0575380 | -0.826570 | 2.522758e-54 | -8.615850e-47 |
| Msa0549170 | Msa0575380 | 0.805987 | 1.023621e-49 | -8.615850e-47 |
| Msa0549540 | Msa0575380 | -0.808491 | 3.016946e-50 | -8.615850e-47 |
| Msa0549900 | Msa0575380 | 0.821137 | 4.737518e-53 | -8.615850e-47 |
| Msa0553090 | Msa0575380 | 0.851553 | 8.233524e-61 | -8.615850e-47 |
| Msa0555280 | Msa0575380 | 0.844638 | 6.677031e-59 | -8.615850e-47 |
| Msa0556070 | Msa0575380 | -0.802176 | 6.353304e-49 | -8.615850e-47 |
| Msa0565150 | Msa0575380 | -0.812027 | 5.211201e-51 | -8.615850e-47 |
| Msa0565860 | Msa0575380 | -0.807993 | 3.852515e-50 | -8.615850e-47 |
| Msa0566090 | Msa0575380 | -0.806317 | 8.724844e-50 | -8.615850e-47 |
| Msa0573650 | Msa0575380 | 0.800749 | 1.245588e-48 | -8.615850e-47 |
| Msa0575380 | Msa0576180 | 0.944188 | 3.082096e-103 | -8.615850e-47 |
| Msa0575380 | Msa0576500 | -0.842977 | 1.859213e-58 | -8.615850e-47 |
| Msa0575380 | Msa0577050 | -0.817220 | 3.692733e-52 | -8.615850e-47 |
| Msa0575380 | Msa0579070 | -0.800819 | 1.204885e-48 | -8.615850e-47 |
| Msa0575380 | Msa0597700 | 0.808093 | 3.668900e-50 | -8.615850e-47 |
| Msa0575380 | Msa0603180 | -0.801862 | 7.369064e-49 | -8.615850e-47 |
| Msa0575380 | Msa0607120 | 0.839638 | 1.406092e-57 | -8.615850e-47 |
| Msa0575380 | Msa0608780 | -0.858605 | 7.347660e-63 | -8.615850e-47 |
| Msa0575380 | Msa0608820 | 0.836716 | 7.947691e-57 | -8.615850e-47 |
| Msa0575380 | Msa0610700 | -0.807513 | 4.871769e-50 | -8.615850e-47 |
| Msa0575380 | Msa0611080 | 0.811945 | 5.429706e-51 | -8.615850e-47 |
| Msa0575380 | Msa0619390 | -0.819534 | 1.104413e-52 | -8.615850e-47 |
| Msa0575380 | Msa0627580 | 0.837093 | 6.369520e-57 | -8.615850e-47 |
| Msa0575380 | Msa0629160 | 0.803729 | 3.033093e-49 | -8.615850e-47 |
| Msa0575380 | Msa0644220 | -0.815798 | 7.685575e-52 | -8.615850e-47 |
| Msa0575380 | Msa0644630 | -0.803051 | 4.192331e-49 | -8.615850e-47 |
| Msa0575380 | Msa0646190 | -0.821392 | 4.136716e-53 | -8.615850e-47 |
| Msa0575380 | Msa0647320 | 0.830138 | 3.475614e-55 | -8.615850e-47 |
| Msa0575380 | Msa0649250 | -0.855849 | 4.786794e-62 | -8.615850e-47 |
| Msa0575380 | Msa0651310 | -0.810492 | 1.122242e-50 | -8.615850e-47 |
| Msa0575380 | Msa0654880 | -0.816282 | 5.993515e-52 | -8.615850e-47 |
| Msa0575380 | Msa0660070 | -0.820650 | 6.133303e-53 | -8.615850e-47 |
| Msa0575380 | Msa0670580 | 0.809542 | 1.796988e-50 | -8.615850e-47 |
| Msa0575380 | Msa0680460 | 0.800270 | 1.559103e-48 | -8.615850e-47 |
| Msa0575380 | Msa0684030 | -0.823791 | 1.145375e-53 | -8.615850e-47 |
| Msa0575380 | Msa0690190 | 0.880800 | 4.072837e-70 | -8.615850e-47 |
| Msa0575380 | Msa0690930 | 0.825624 | 4.234265e-54 | -8.615850e-47 |
| Msa0575380 | Msa0691610 | 0.833897 | 4.096678e-56 | -8.615850e-47 |
| Msa0575380 | Msa0693500 | -0.815056 | 1.124230e-51 | -8.615850e-47 |
| Msa0575380 | Msa0701460 | -0.808699 | 2.724669e-50 | -8.615850e-47 |
| Msa0575380 | Msa0701530 | -0.807796 | 4.243947e-50 | -8.615850e-47 |
| Msa0575380 | Msa0705810 | -0.850050 | 2.181931e-60 | -8.615850e-47 |
| Msa0575380 | Msa0707490 | 0.808479 | 3.035577e-50 | -8.615850e-47 |
| Msa0575380 | Msa0707880 | -0.839716 | 1.341486e-57 | -8.615850e-47 |
| Msa0575380 | Msa0715510 | 0.804075 | 2.570691e-49 | -8.615850e-47 |
| Msa0575380 | Msa0718500 | 0.834812 | 2.413563e-56 | -8.615850e-47 |
| Msa0575380 | Msa0732970 | 0.838012 | 3.701382e-57 | -8.615850e-47 |
| Msa0575380 | Msa0738460 | -0.814437 | 1.541249e-51 | -8.615850e-47 |
| Msa0575380 | Msa0739720 | 0.800320 | 1.523155e-48 | -8.615850e-47 |
| Msa0575380 | Msa0742090 | -0.876471 | 1.360391e-68 | -8.615850e-47 |
| Msa0575380 | Msa0744010 | -0.805620 | 1.222279e-49 | -8.615850e-47 |
| Msa0575380 | Msa0745140 | 0.802909 | 4.485078e-49 | -8.615850e-47 |
| Msa0575380 | Msa0754020 | -0.814320 | 1.635769e-51 | -8.615850e-47 |
| Msa0575380 | Msa0758400 | 0.803963 | 2.712425e-49 | -8.615850e-47 |
| Msa0575380 | Msa0758880 | -0.804064 | 2.584685e-49 | -8.615850e-47 |
| Msa0575380 | Msa0759610 | 0.829389 | 5.290827e-55 | -8.615850e-47 |
| Msa0575380 | Msa0769910 | -0.809857 | 1.537669e-50 | -8.615850e-47 |
| Msa0575380 | Msa0773960 | 0.837536 | 4.904753e-57 | -8.615850e-47 |
| Msa0575380 | Msa0775660 | 0.834241 | 3.357635e-56 | -8.615850e-47 |
| Msa0575380 | Msa0776590 | -0.831734 | 1.411187e-55 | -8.615850e-47 |
| Msa0575380 | Msa0776640 | 0.803286 | 3.748376e-49 | -8.615850e-47 |
| Msa0575380 | Msa0788160 | -0.831968 | 1.235281e-55 | -8.615850e-47 |
| Msa0575380 | Msa0790650 | -0.819789 | 9.655699e-53 | -8.615850e-47 |
| Msa0575380 | Msa0792410 | 0.809505 | 1.830700e-50 | -8.615850e-47 |
| Msa0575380 | Msa0793100 | -0.831810 | 1.351447e-55 | -8.615850e-47 |
| Msa0575380 | Msa0801150 | 0.866407 | 2.917562e-65 | -8.615850e-47 |
| Msa0575380 | Msa0801920 | -0.805623 | 1.220792e-49 | -8.615850e-47 |
| Msa0575380 | Msa0807100 | -0.820088 | 8.252406e-53 | -8.615850e-47 |
| Msa0575380 | Msa0817880 | -0.807815 | 4.202699e-50 | -8.615850e-47 |
| Msa0575380 | Msa0823310 | -0.882413 | 1.063461e-70 | -8.615850e-47 |
| Msa0575380 | Msa0825360 | -0.804443 | 2.155129e-49 | -8.615850e-47 |
| Msa0575380 | Msa0825920 | 0.802941 | 4.418357e-49 | -8.615850e-47 |
| Msa0575380 | Msa0833030 | -0.811138 | 8.131177e-51 | -8.615850e-47 |
| Msa0575380 | Msa0838120 | -0.803841 | 2.875700e-49 | -8.615850e-47 |
| Msa0575380 | Msa0838620 | -0.805260 | 1.454416e-49 | -8.615850e-47 |
| Msa0575380 | Msa0838670 | -0.806876 | 6.647684e-50 | -8.615850e-47 |
| Msa0575380 | Msa0839530 | 0.846047 | 2.776453e-59 | -8.615850e-47 |
| Msa0575380 | Msa0840520 | 0.803773 | 2.969918e-49 | -8.615850e-47 |
| Msa0575380 | Msa0848670 | -0.814439 | 1.539701e-51 | -8.615850e-47 |
| Msa0575380 | Msa0851760 | 0.811261 | 7.647804e-51 | -8.615850e-47 |
| Msa0575380 | Msa0853590 | 0.811040 | 8.538589e-51 | -8.615850e-47 |
| Msa0575380 | Msa0862230 | -0.813181 | 2.914630e-51 | -8.615850e-47 |
| Msa0575380 | Msa0864530 | -0.814032 | 1.893593e-51 | -8.615850e-47 |
| Msa0575380 | Msa0876270 | -0.829918 | 3.933969e-55 | -8.615850e-47 |
| Msa0575380 | Msa0879650 | -0.812197 | 4.786728e-51 | -8.615850e-47 |
| Msa0575380 | Msa0880850 | 0.806306 | 8.770321e-50 | -8.615850e-47 |
| Msa0575380 | Msa0880910 | 0.812846 | 3.451890e-51 | -8.615850e-47 |
| Msa0575380 | Msa0887100 | -0.829638 | 4.602637e-55 | -8.615850e-47 |
| Msa0575380 | Msa0892020 | -0.807984 | 3.869425e-50 | -8.615850e-47 |
| Msa0575380 | Msa0901660 | -0.805919 | 1.057963e-49 | -8.615850e-47 |
| Msa0575380 | Msa0913140 | -0.822937 | 1.813214e-53 | -8.615850e-47 |
| Msa0575380 | Msa0928060 | -0.803537 | 3.324589e-49 | -8.615850e-47 |
| Msa0575380 | Msa0930210 | 0.911393 | 6.395501e-83 | -8.615850e-47 |
| Msa0575380 | Msa0930770 | 0.801887 | 7.281801e-49 | -8.615850e-47 |
| Msa0575380 | Msa0932140 | 0.820220 | 7.695955e-53 | -8.615850e-47 |
| Msa0575380 | Msa0932150 | 0.814341 | 1.618866e-51 | -8.615850e-47 |
| Msa0575380 | Msa0945030 | 0.828833 | 7.216217e-55 | -8.615850e-47 |
| Msa0575380 | Msa0950470 | -0.814436 | 1.542426e-51 | -8.615850e-47 |
| Msa0575380 | Msa0950570 | -0.819828 | 9.463712e-53 | -8.615850e-47 |
| Msa0575380 | Msa0956910 | -0.809468 | 1.864085e-50 | -8.615850e-47 |
| Msa0575380 | Msa0967780 | 0.809211 | 2.117124e-50 | -8.615850e-47 |
| Msa0575380 | Msa0967900 | -0.822897 | 1.852745e-53 | -8.615850e-47 |
| Msa0575380 | Msa0970270 | 0.823455 | 1.372795e-53 | -8.615850e-47 |
| Msa0575380 | Msa0973010 | -0.808983 | 2.368311e-50 | -8.615850e-47 |
| Msa0575380 | Msa0975550 | -0.813208 | 2.875550e-51 | -8.615850e-47 |
| Msa0575380 | Msa0998660 | -0.814584 | 1.430188e-51 | -8.615850e-47 |
| Msa0575380 | Msa1002820 | 0.828031 | 1.126801e-54 | -8.615850e-47 |
| Msa0575380 | Msa1004110 | 0.800992 | 1.110970e-48 | -8.615850e-47 |
| Msa0575380 | Msa1004720 | -0.839933 | 1.177857e-57 | -8.615850e-47 |
| Msa0575380 | Msa1013190 | 0.802984 | 4.327174e-49 | -8.615850e-47 |
| Msa0575380 | Msa1019220 | 0.830837 | 2.344720e-55 | -8.615850e-47 |
| Msa0575380 | Msa1019230 | 0.833646 | 4.732417e-56 | -8.615850e-47 |
| Msa0575380 | Msa1025440 | -0.811265 | 7.633938e-51 | -8.615850e-47 |
| Msa0575380 | Msa1028890 | -0.801324 | 9.499270e-49 | -8.615850e-47 |
| Msa0575380 | Msa1029820 | 0.809396 | 1.931923e-50 | -8.615850e-47 |
| Msa0575380 | Msa1029860 | 0.806756 | 7.047468e-50 | -8.615850e-47 |
| Msa0575380 | Msa1031530 | -0.817809 | 2.719991e-52 | -8.615850e-47 |
| Msa0575380 | Msa1036020 | 0.808444 | 3.087719e-50 | -8.615850e-47 |
| Msa0575380 | Msa1063260 | 0.810616 | 1.055163e-50 | -8.615850e-47 |
| Msa0575380 | Msa1068730 | 0.806043 | 9.963152e-50 | -8.615850e-47 |
| Msa0575380 | Msa1068780 | 0.809028 | 2.316799e-50 | -8.615850e-47 |
| Msa0575380 | Msa1068940 | 0.811979 | 5.339201e-51 | -8.615850e-47 |
| Msa0575380 | Msa1068950 | 0.815006 | 1.153063e-51 | -8.615850e-47 |
| Msa0575380 | Msa1070630 | -0.832348 | 9.948321e-56 | -8.615850e-47 |
| Msa0575380 | Msa1076280 | 0.841483 | 4.623474e-58 | -8.615850e-47 |
| Msa0575380 | Msa1078300 | 0.802134 | 6.478858e-49 | -8.615850e-47 |
| Msa0575380 | Msa1078590 | -0.801095 | 1.058257e-48 | -8.615850e-47 |
| Msa0575380 | Msa1078600 | -0.837389 | 5.350291e-57 | -8.615850e-47 |
| Msa0575380 | Msa1078770 | -0.843267 | 1.556302e-58 | -8.615850e-47 |
| Msa0575380 | Msa1083130 | 0.860383 | 2.146375e-63 | -8.615850e-47 |
| Msa0575380 | Msa1088150 | 0.836992 | 6.758530e-57 | -8.615850e-47 |
| Msa0575380 | Msa1088160 | 0.842141 | 3.099523e-58 | -8.615850e-47 |
| Msa0575380 | Msa1088740 | -0.831594 | 1.527730e-55 | -8.615850e-47 |
| Msa0575380 | Msa1096570 | -0.801472 | 8.861855e-49 | -8.615850e-47 |
| Msa0575380 | Msa1101300 | -0.809608 | 1.739400e-50 | -8.615850e-47 |
| Msa0575380 | Msa1104130 | 0.832216 | 1.072581e-55 | -8.615850e-47 |
| Msa0575380 | Msa1108560 | 0.806071 | 9.827853e-50 | -8.615850e-47 |
| Msa0575380 | Msa1109500 | -0.804312 | 2.295315e-49 | -8.615850e-47 |
| Msa0575380 | Msa1129080 | -0.813137 | 2.980529e-51 | -8.615850e-47 |
| Msa0575380 | Msa1132330 | 0.804762 | 1.849236e-49 | -8.615850e-47 |
| Msa0575380 | Msa1133440 | -0.854890 | 9.102509e-62 | -8.615850e-47 |
| Msa0575380 | Msa1134180 | 0.802380 | 5.766944e-49 | -8.615850e-47 |
| Msa0575380 | Msa1134260 | 0.805085 | 1.582467e-49 | -8.615850e-47 |
| Msa0575380 | Msa1143860 | -0.818353 | 2.048730e-52 | -8.615850e-47 |
| Msa0575380 | Msa1149910 | 0.811821 | 5.780056e-51 | -8.615850e-47 |
| Msa0575380 | Msa1156430 | -0.801506 | 8.720002e-49 | -8.615850e-47 |
| Msa0575380 | Msa1156710 | 0.802123 | 6.512769e-49 | -8.615850e-47 |
| Msa0575380 | Msa1156740 | 0.816452 | 5.489515e-52 | -8.615850e-47 |
| Msa0575380 | Msa1158450 | -0.829717 | 4.402047e-55 | -8.615850e-47 |
| Msa0575380 | Msa1162750 | 0.813588 | 2.372278e-51 | -8.615850e-47 |
| Msa0575380 | Msa1165460 | 0.801590 | 8.379824e-49 | -8.615850e-47 |
| Msa0575380 | Msa1169600 | -0.830376 | 3.040449e-55 | -8.615850e-47 |
| Msa0575380 | Msa1175380 | 0.813444 | 2.551553e-51 | -8.615850e-47 |
| Msa0575380 | Msa1181090 | 0.822589 | 2.184761e-53 | -8.615850e-47 |
| Msa0575380 | Msa1184010 | -0.816499 | 5.357662e-52 | -8.615850e-47 |
| Msa0575380 | Msa1190350 | -0.830255 | 3.254472e-55 | -8.615850e-47 |
| Msa0575380 | Msa1192360 | 0.802991 | 4.314224e-49 | -8.615850e-47 |
| Msa0575380 | Msa1200270 | 0.809709 | 1.654987e-50 | -8.615850e-47 |
| Msa0575380 | Msa1200290 | 0.806133 | 9.538138e-50 | -8.615850e-47 |
| Msa0575380 | Msa1204870 | -0.801914 | 7.191273e-49 | -8.615850e-47 |
| Msa0575380 | Msa1204900 | -0.812678 | 3.756141e-51 | -8.615850e-47 |
| Msa0575380 | Msa1205270 | -0.827088 | 1.897704e-54 | -8.615850e-47 |
| Msa0575380 | Msa1209160 | -0.807717 | 4.411004e-50 | -8.615850e-47 |
| Msa0575380 | Msa1215220 | -0.803534 | 3.330592e-49 | -8.615850e-47 |
| Msa0575380 | Msa1215540 | -0.814263 | 1.684256e-51 | -8.615850e-47 |
| Msa0575380 | Msa1219060 | -0.836472 | 9.172441e-57 | -8.615850e-47 |
| Msa0575380 | Msa1223960 | 0.814752 | 1.312995e-51 | -8.615850e-47 |
| Msa0575380 | Msa1223990 | 0.803471 | 3.431183e-49 | -8.615850e-47 |
| Msa0575380 | Msa1225140 | -0.818573 | 1.826371e-52 | -8.615850e-47 |
| Msa0575380 | Msa1228350 | -0.836875 | 7.241221e-57 | -8.615850e-47 |
| Msa0575380 | Msa1228460 | -0.857334 | 1.752489e-62 | -8.615850e-47 |
| Msa0575380 | Msa1235470 | 0.824774 | 6.726010e-54 | -8.615850e-47 |
| Msa0575380 | Msa1236860 | -0.871616 | 5.965025e-67 | -8.615850e-47 |
| Msa0575380 | Msa1239900 | -0.801154 | 1.029144e-48 | -8.615850e-47 |
| Msa0575380 | Msa1243630 | -0.801138 | 1.037132e-48 | -8.615850e-47 |
| Msa0575380 | Msa1255020 | -0.881979 | 1.529083e-70 | -8.615850e-47 |
| Msa0575380 | Msa1255030 | -0.826616 | 2.460762e-54 | -8.615850e-47 |
| Msa0575380 | Msa1255710 | 0.818319 | 2.085516e-52 | -8.615850e-47 |
| Msa0575380 | Msa1256490 | -0.806459 | 8.141383e-50 | -8.615850e-47 |
| Msa0575380 | Msa1263110 | 0.819591 | 1.071652e-52 | -8.615850e-47 |
| Msa0575380 | Msa1263520 | 0.804410 | 2.189051e-49 | -8.615850e-47 |
| Msa0575380 | Msa1266120 | -0.830535 | 2.780528e-55 | -8.615850e-47 |
| Msa0575380 | Msa1269730 | -0.800047 | 1.730880e-48 | -8.615850e-47 |
| Msa0575380 | Msa1273320 | 0.831360 | 1.744618e-55 | -8.615850e-47 |
| Msa0575380 | Msa1277350 | 0.802976 | 4.345369e-49 | -8.615850e-47 |
| Msa0575380 | Msa1286860 | -0.821881 | 3.189794e-53 | -8.615850e-47 |
| Msa0575380 | Msa1288070 | 0.817119 | 3.889588e-52 | -8.615850e-47 |
| Msa0575380 | Msa1291070 | -0.801901 | 7.234242e-49 | -8.615850e-47 |
| Msa0575380 | Msa1293840 | 0.801248 | 9.849555e-49 | -8.615850e-47 |
| Msa0575380 | Msa1295210 | -0.833346 | 5.620956e-56 | -8.615850e-47 |
| Msa0575380 | Msa1295470 | -0.884400 | 1.980786e-71 | -8.615850e-47 |
| Msa0575380 | Msa1295480 | -0.815734 | 7.943200e-52 | -8.615850e-47 |
| Msa0575380 | Msa1296810 | -0.809894 | 1.510093e-50 | -8.615850e-47 |
| Msa0575380 | Msa1297220 | -0.842761 | 2.123069e-58 | -8.615850e-47 |
| Msa0575380 | Msa1315760 | 0.835039 | 2.116172e-56 | -8.615850e-47 |
| Msa0575380 | Msa1317240 | -0.879300 | 1.394090e-69 | -8.615850e-47 |
| Msa0575380 | Msa1323260 | -0.850526 | 1.603708e-60 | -8.615850e-47 |
| Msa0575380 | Msa1332690 | -0.834553 | 2.804846e-56 | -8.615850e-47 |
| Msa0575380 | Msa1342110 | -0.808668 | 2.765492e-50 | -8.615850e-47 |
| Msa0575380 | Msa1342360 | -0.828938 | 6.807184e-55 | -8.615850e-47 |
| Msa0575380 | Msa1343450 | -0.843070 | 1.756029e-58 | -8.615850e-47 |
| Msa0575380 | Msa1348330 | 0.812413 | 4.293806e-51 | -8.615850e-47 |
| Msa0575380 | Msa1348430 | 0.814869 | 1.236912e-51 | -8.615850e-47 |
| Msa0575380 | Msa1350580 | -0.820872 | 5.452856e-53 | -8.615850e-47 |
| Msa0575380 | Msa1354080 | 0.805433 | 1.338020e-49 | -8.615850e-47 |
| Msa0575380 | Msa1359890 | -0.832264 | 1.043875e-55 | -8.615850e-47 |
| Msa0575380 | Msa1368390 | 0.801539 | 8.586700e-49 | -8.615850e-47 |
| Msa0575380 | Msa1369180 | -0.852189 | 5.434364e-61 | -8.615850e-47 |
| Msa0575380 | Msa1373390 | -0.823695 | 1.206224e-53 | -8.615850e-47 |
| Msa0575380 | Msa1375000 | -0.802691 | 4.975193e-49 | -8.615850e-47 |
| Msa0575380 | Msa1375780 | -0.829977 | 3.805415e-55 | -8.615850e-47 |
| Msa0575380 | Msa1376010 | -0.818269 | 2.141170e-52 | -8.615850e-47 |
| Msa0575380 | Msa1379270 | -0.829111 | 6.179269e-55 | -8.615850e-47 |
| Msa0575380 | Msa1387480 | 0.839246 | 1.776682e-57 | -8.615850e-47 |
| Msa0575380 | Msa1388650 | -0.815042 | 1.131835e-51 | -8.615850e-47 |
| Msa0575380 | Msa1404810 | -0.800962 | 1.126883e-48 | -8.615850e-47 |
| Msa0575380 | Msa1405380 | -0.831545 | 1.570808e-55 | -8.615850e-47 |
| Msa0575380 | Msa1405830 | 0.813704 | 2.236900e-51 | -8.615850e-47 |
| Msa0575380 | Msa1408730 | 0.802443 | 5.597215e-49 | -8.615850e-47 |
| Msa0575380 | Msa1408860 | -0.820591 | 6.326653e-53 | -8.615850e-47 |
| Msa0575380 | Msa1412500 | 0.823895 | 1.082546e-53 | -8.615850e-47 |
| Msa0575380 | Msa1414780 | -0.807900 | 4.032213e-50 | -8.615850e-47 |
| Msa0575380 | Msa1417220 | 0.804896 | 1.733297e-49 | -8.615850e-47 |
| Msa0575380 | Msa1418840 | -0.817113 | 3.903152e-52 | -8.615850e-47 |
| Msa0575380 | Msa1421540 | 0.806651 | 7.418245e-50 | -8.615850e-47 |
| Msa0575380 | Msa1436620 | 0.800946 | 1.135414e-48 | -8.615850e-47 |
| Msa0575380 | Msa1436660 | -0.818444 | 1.953522e-52 | -8.615850e-47 |
| Msa0575380 | Msa1438510 | 0.809681 | 1.677751e-50 | -8.615850e-47 |
| Msa0575380 | Msa1441450 | 0.837965 | 3.807241e-57 | -8.615850e-47 |
| Msa0575380 | Msa1449270 | -0.808470 | 3.048415e-50 | -8.615850e-47 |
| Msa0575380 | Msa1450630 | -0.850023 | 2.220227e-60 | -8.615850e-47 |
| Msa0575380 | Msa1451000 | 0.813979 | 1.945732e-51 | -8.615850e-47 |
| Msa0575380 | Msa1451690 | -0.821924 | 3.116865e-53 | -8.615850e-47 |
| Msa0575380 | Msa1451930 | 0.815988 | 6.970238e-52 | -8.615850e-47 |
| Msa0575380 | Msa1453050 | 0.826490 | 2.635988e-54 | -8.615850e-47 |
| Msa0575380 | Msa1453540 | -0.811850 | 5.695490e-51 | -8.615850e-47 |
| Msa0575380 | Msa1456620 | -0.848754 | 5.009160e-60 | -8.615850e-47 |
| Msa0575380 | Msa1461660 | 0.825846 | 3.752519e-54 | -8.615850e-47 |
| Msa0575380 | Msa1462610 | 0.808276 | 3.353212e-50 | -8.615850e-47 |
| Msa0575380 | Msa1466130 | 0.822374 | 2.451231e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575380 | MtrunA17_Chr8g0392551 | 99.662 | 296 | 1 | 0 | 1 | 296 | 1 | 296 | 0.0 | 606 |
| Msa0575380 | MtrunA17_Chr6g0483441 | 69.103 | 301 | 81 | 4 | 1 | 296 | 1 | 294 | 1.01e-138 | 393 |
| Msa0575380 | MtrunA17_Chr4g0053001 | 54.232 | 319 | 123 | 7 | 1 | 296 | 12 | 330 | 5.71e-103 | 304 |
| Msa0575380 | MtrunA17_Chr2g0331671 | 43.590 | 312 | 156 | 8 | 1 | 296 | 2 | 309 | 7.03e-77 | 236 |
| Msa0575380 | MtrunA17_Chr4g0038691 | 44.109 | 331 | 130 | 12 | 1 | 295 | 6 | 317 | 4.16e-72 | 224 |
| Msa0575380 | MtrunA17_Chr6g0486001 | 40.566 | 318 | 155 | 10 | 1 | 296 | 1 | 306 | 1.53e-65 | 207 |
| Msa0575380 | MtrunA17_Chr3g0091821 | 34.896 | 192 | 92 | 6 | 113 | 296 | 28 | 194 | 2.40e-28 | 107 |
| Msa0575380 | MtrunA17_Chr3g0090061 | 28.079 | 203 | 132 | 5 | 98 | 293 | 151 | 346 | 1.21e-17 | 82.0 |
| Msa0575380 | MtrunA17_Chr8g0379281 | 36.364 | 187 | 95 | 6 | 20 | 203 | 21 | 186 | 1.73e-17 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575380 | AT1G45688.1 | 56.213 | 338 | 104 | 4 | 1 | 294 | 1 | 338 | 1.42e-122 | 354 |
| Msa0575380 | AT5G42860.1 | 57.680 | 319 | 107 | 5 | 1 | 294 | 1 | 316 | 9.28e-114 | 331 |
| Msa0575380 | AT1G45688.2 | 60.084 | 238 | 68 | 4 | 1 | 211 | 1 | 238 | 3.12e-92 | 274 |
| Msa0575380 | AT4G35170.1 | 36.301 | 292 | 175 | 4 | 14 | 294 | 6 | 297 | 4.79e-58 | 188 |
| Msa0575380 | AT2G41990.1 | 41.234 | 308 | 153 | 9 | 1 | 293 | 1 | 295 | 1.31e-55 | 182 |
| Msa0575380 | AT3G24605.1 | 35.986 | 289 | 156 | 8 | 1 | 274 | 3 | 277 | 9.11e-44 | 151 |
| Msa0575380 | AT3G24600.1 | 35.390 | 308 | 176 | 8 | 1 | 293 | 2 | 301 | 7.67e-41 | 144 |
| Msa0575380 | AT3G08490.1 | 22.162 | 185 | 141 | 2 | 107 | 289 | 79 | 262 | 4.04e-13 | 68.6 |
Find 103 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTCCTTGCTTTCATTCT+TGG | 0.127415 | 4_1:-79242000 | Msa0575380:CDS |
| GGTGGTTGTTGTTGAGTTTC+CGG | 0.221757 | 4_1:+79242118 | None:intergenic |
| AGCTTATGTGCTTGGGAAAT+TGG | 0.250083 | 4_1:-79241155 | Msa0575380:CDS |
| TGTCCCATCATGTGGTAATA+AGG | 0.257475 | 4_1:-79240763 | Msa0575380:three_prime_UTR |
| TCCTATTCAGAAATCGTAAT+TGG | 0.272853 | 4_1:-79241651 | Msa0575380:CDS |
| TTAGTTCCATATATGAAAAT+TGG | 0.277067 | 4_1:+79240504 | None:intergenic |
| ATATTCATTGCTTGTTTGTT+GGG | 0.296242 | 4_1:-79242444 | Msa0575380:five_prime_UTR |
| CATATTCATTGCTTGTTTGT+TGG | 0.300027 | 4_1:-79242445 | Msa0575380:five_prime_UTR |
| ACCCACCAAGCGAAATTAAA+AGG | 0.302231 | 4_1:-79242544 | None:intergenic |
| GAAACCCCATGTCATGATTA+AGG | 0.315871 | 4_1:-79241920 | Msa0575380:intron |
| TGAATTATTCTTTGATTAGT+TGG | 0.322680 | 4_1:-79240610 | Msa0575380:three_prime_UTR |
| GCCAATTACGATTTCTGAAT+AGG | 0.334846 | 4_1:+79241650 | None:intergenic |
| AATCATGACATGGGGTTTCA+TGG | 0.345102 | 4_1:+79241924 | None:intergenic |
| GTGGTTGTTGTTGAGTTTCC+GGG | 0.345752 | 4_1:+79242119 | None:intergenic |
| AACGAATGATTCAACTGTTT+CGG | 0.350373 | 4_1:+79240658 | None:intergenic |
| ATCATAGAAAAGTGATTCAT+TGG | 0.358061 | 4_1:-79240974 | Msa0575380:three_prime_UTR |
| CCATTCCACTTCTCAATCAT+AGG | 0.363070 | 4_1:+79241042 | None:intergenic |
| ATCAATTTCTTTCCAAGGCT+TGG | 0.363690 | 4_1:+79242086 | None:intergenic |
| AGAAAGAGAAATTGCATTAG+TGG | 0.371972 | 4_1:+79242500 | None:intergenic |
| GAGAGAAAAGAGTGAACAAA+AGG | 0.373174 | 4_1:+79241971 | None:intergenic |
| CAAACCAAAATACTACAAAA+AGG | 0.374910 | 4_1:-79241131 | Msa0575380:CDS |
| GATGAAGAAGCACATGGAAA+TGG | 0.376069 | 4_1:-79241013 | Msa0575380:three_prime_UTR |
| TTTAATGGCACTGGTAAAGT+TGG | 0.388529 | 4_1:+79241202 | None:intergenic |
| GAACCCATTGGGCTGATAAC+AGG | 0.388750 | 4_1:+79242183 | None:intergenic |
| TAAAGAAAGAAAGACATGTT+TGG | 0.407442 | 4_1:-79240839 | Msa0575380:three_prime_UTR |
| TATGTATTATAAGCTCCATA+TGG | 0.416758 | 4_1:-79240573 | Msa0575380:three_prime_UTR |
| AGATCTAGAGCTTATGTGCT+TGG | 0.422698 | 4_1:-79241163 | Msa0575380:CDS |
| ATCATTCTCTTTCTCGTCGT+TGG | 0.425007 | 4_1:-79242023 | Msa0575380:CDS |
| AAGAAAGACATGTTTGGATT+CGG | 0.431336 | 4_1:-79240833 | Msa0575380:three_prime_UTR |
| GATCTAGAGCTTATGTGCTT+GGG | 0.431536 | 4_1:-79241162 | Msa0575380:CDS |
| GAAGCACATGGAAATGGAAA+TGG | 0.433427 | 4_1:-79241007 | Msa0575380:three_prime_UTR |
| TCTTCCTCTAGCCGTTTCTC+TGG | 0.434741 | 4_1:-79242144 | Msa0575380:CDS |
| CTAGCCGTTTCTCTGGTTCC+CGG | 0.451437 | 4_1:-79242137 | Msa0575380:CDS |
| ATCATGTGGTAATAAGGTTA+AGG | 0.451693 | 4_1:-79240757 | Msa0575380:three_prime_UTR |
| CAGCTCATAGGAATAAGAAA+TGG | 0.459545 | 4_1:-79240928 | Msa0575380:three_prime_UTR |
| AGTAGAATGAAAGGAGGTAG+TGG | 0.462601 | 4_1:+79242206 | None:intergenic |
| AATCGGTGACTTCACCCATA+TGG | 0.464525 | 4_1:+79240558 | None:intergenic |
| GCTAGTCTTAGCAGCACAAC+TGG | 0.471971 | 4_1:-79241229 | Msa0575380:CDS |
| ACAAAGGGGATACAGCTCAT+AGG | 0.475889 | 4_1:-79240940 | Msa0575380:three_prime_UTR |
| ACTCCTGTTATCAGCCCAAT+GGG | 0.481587 | 4_1:-79242186 | Msa0575380:CDS |
| ATTACATCAATTTCTTTCCA+AGG | 0.493552 | 4_1:+79242081 | None:intergenic |
| ATTAGTGAGTGTGGCAGTGA+TGG | 0.497703 | 4_1:-79241281 | Msa0575380:CDS |
| TTAACCTTATTACCACATGA+TGG | 0.499610 | 4_1:+79240759 | None:intergenic |
| TAGCACCACTTCCATACAAT+GGG | 0.499784 | 4_1:+79241248 | None:intergenic |
| AGTACGTAGTAGATTAGATC+TGG | 0.501041 | 4_1:+79242370 | None:intergenic |
| GGAAGCAAGATCCCATTGTA+TGG | 0.504734 | 4_1:-79241259 | Msa0575380:CDS |
| GTTCCATATATGAAAATTGG+CGG | 0.505542 | 4_1:+79240507 | None:intergenic |
| TCCAAGGCTTGGTGTTACTA+CGG | 0.507244 | 4_1:+79242097 | None:intergenic |
| ATCATGACATGGGGTTTCAT+GGG | 0.508587 | 4_1:+79241925 | None:intergenic |
| TCTGAATAGGATAGATCTAA+AGG | 0.513188 | 4_1:+79241663 | None:intergenic |
| AATGAGGAGGAGAACCCATT+GGG | 0.513468 | 4_1:+79242172 | None:intergenic |
| TACTCCTGTTATCAGCCCAA+TGG | 0.518448 | 4_1:-79242187 | Msa0575380:CDS |
| AAAGACATGTTTGGATTCGG+TGG | 0.522071 | 4_1:-79240830 | Msa0575380:three_prime_UTR |
| GAATATGAATATGAATATGA+AGG | 0.528969 | 4_1:+79242461 | None:intergenic |
| CAAGCTGGTTCAGATGCAAC+CGG | 0.529387 | 4_1:-79241777 | Msa0575380:CDS |
| CTACTAGAACTTAGAGAATG+TGG | 0.532410 | 4_1:+79240864 | None:intergenic |
| ATGTATTATAAGCTCCATAT+GGG | 0.538211 | 4_1:-79240572 | Msa0575380:three_prime_UTR |
| AAGATCCCATTGTATGGAAG+TGG | 0.539938 | 4_1:-79241253 | Msa0575380:CDS |
| TCAGAAATCGTAATTGGCAC+TGG | 0.540742 | 4_1:-79241645 | Msa0575380:CDS |
| ATGAAAATTGGCGGTGTGTG+TGG | 0.540875 | 4_1:+79240516 | None:intergenic |
| TAACCTTATTACCACATGAT+GGG | 0.541635 | 4_1:+79240760 | None:intergenic |
| TTAGTGAGTGTGGCAGTGAT+GGG | 0.543651 | 4_1:-79241280 | Msa0575380:CDS |
| CAAGCTGGCCATCTTACAAT+CGG | 0.544370 | 4_1:+79240541 | None:intergenic |
| CATAGGTGCAAGACTTGTTG+AGG | 0.545634 | 4_1:+79241059 | None:intergenic |
| ATTGATGTAATTGAAGAAGA+AGG | 0.546086 | 4_1:-79242069 | Msa0575380:CDS |
| ACCGTAGTAACACCAAGCCT+TGG | 0.548483 | 4_1:-79242098 | Msa0575380:CDS |
| AAAAGCCAAGAATGAAAGCA+AGG | 0.553973 | 4_1:+79241995 | None:intergenic |
| CTAGAGGAAGAGTGAGAATG+AGG | 0.556981 | 4_1:+79242156 | None:intergenic |
| TGAAGTCACCGATTGTAAGA+TGG | 0.558580 | 4_1:-79240549 | Msa0575380:three_prime_UTR |
| GAATGAGGAGGAGAACCCAT+TGG | 0.564529 | 4_1:+79242171 | None:intergenic |
| TGATTGAGAAGTGGAATGGA+AGG | 0.574446 | 4_1:-79241038 | Msa0575380:exon |
| GGACTTTGAACATAGTATGC+TGG | 0.578237 | 4_1:+79242249 | None:intergenic |
| GATAACAGGAGTAGAATGAA+AGG | 0.579520 | 4_1:+79242197 | None:intergenic |
| GAGCATGTTAGAGTTCAAGC+TGG | 0.583891 | 4_1:-79241792 | Msa0575380:CDS |
| AACAGGAGTAGAATGAAAGG+AGG | 0.584271 | 4_1:+79242200 | None:intergenic |
| GTATACCTTAATCATGACAT+GGG | 0.588377 | 4_1:+79241915 | None:intergenic |
| ATAGGTGCAAGACTTGTTGA+GGG | 0.588412 | 4_1:+79241060 | None:intergenic |
| GAGGAAGAGTGAGAATGAGG+AGG | 0.592438 | 4_1:+79242159 | None:intergenic |
| GTTCAAAGTCCATCCCATGA+TGG | 0.593197 | 4_1:-79242237 | Msa0575380:CDS |
| GAAATTCACTTATCGTAACA+AGG | 0.596007 | 4_1:-79241718 | Msa0575380:CDS |
| GTTTCCGGGAACCAGAGAAA+CGG | 0.599995 | 4_1:+79242133 | None:intergenic |
| CCTATGATTGAGAAGTGGAA+TGG | 0.605678 | 4_1:-79241042 | Msa0575380:exon |
| TTGCACCTATGATTGAGAAG+TGG | 0.608398 | 4_1:-79241047 | Msa0575380:exon |
| AGTATACCTTAATCATGACA+TGG | 0.609619 | 4_1:+79241914 | None:intergenic |
| CTAGCACCACTTCCATACAA+TGG | 0.615096 | 4_1:+79241247 | None:intergenic |
| TGTGGATGATGCATCTAAGC+TGG | 0.624274 | 4_1:+79242290 | None:intergenic |
| GAGTCAAAGATTAGTGAGTG+TGG | 0.625033 | 4_1:-79241290 | Msa0575380:CDS |
| AAGGCTTGGTGTTACTACGG+TGG | 0.628950 | 4_1:+79242100 | None:intergenic |
| TGGGTCTGCTAGCACCCCAA+AGG | 0.632476 | 4_1:+79241944 | None:intergenic |
| ACATAGTATGCTGGTCGACG+AGG | 0.635101 | 4_1:+79242258 | None:intergenic |
| ATTCACTGTAATCATATCAG+TGG | 0.649253 | 4_1:+79241749 | None:intergenic |
| ATAGGATAGATCTAAAGGTG+TGG | 0.651020 | 4_1:+79241668 | None:intergenic |
| TGGTTCAGATGCAACCGGTG+TGG | 0.656557 | 4_1:-79241772 | Msa0575380:CDS |
| GCGGTGTGTGTGGAACAAGC+TGG | 0.656733 | 4_1:+79240526 | None:intergenic |
| AATCATATCAGTGGCCACAC+CGG | 0.658554 | 4_1:+79241758 | None:intergenic |
| GGAACCAGAGAAACGGCTAG+AGG | 0.666320 | 4_1:+79242140 | None:intergenic |
| AAATTCACTTATCGTAACAA+GGG | 0.671507 | 4_1:-79241717 | Msa0575380:CDS |
| CACCAAGCGAAATTAAAAGG+AGG | 0.678795 | 4_1:-79242541 | None:intergenic |
| AGTAGATTAGATCTGGTGAG+TGG | 0.681105 | 4_1:+79242377 | None:intergenic |
| TATACCTTAATCATGACATG+GGG | 0.686791 | 4_1:+79241916 | None:intergenic |
| AAGGAAGATGAAGAAGCACA+TGG | 0.687158 | 4_1:-79241019 | Msa0575380:three_prime_UTR |
| TCGACGAGGAGATCTTGTTG+TGG | 0.700688 | 4_1:+79242272 | None:intergenic |
| GCATACAAAGACAGACTCAG+AGG | 0.705617 | 4_1:-79242316 | Msa0575380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTGTTATGTCAAAT+GGG | - | chr4_1:79241189-79241208 | Msa0575380:CDS | 15.0% |
| !! | CAAAATTAAAAAGTAGAAAA+AGG | + | chr4_1:79242271-79242290 | None:intergenic | 15.0% |
| !!! | TTTTAATTGTTATGTCAAAT+GGG | - | chr4_1:79241189-79241208 | Msa0575380:CDS | 15.0% |
| !! | CAAAATTAAAAAGTAGAAAA+AGG | + | chr4_1:79242271-79242290 | None:intergenic | 15.0% |
| !! | GAATATGAATATGAATATGA+AGG | + | chr4_1:79240594-79240613 | None:intergenic | 20.0% |
| !!! | CTTTTAATTGTTATGTCAAA+TGG | - | chr4_1:79241188-79241207 | Msa0575380:CDS | 20.0% |
| !! | TGAATTATTCTTTGATTAGT+TGG | - | chr4_1:79242442-79242461 | Msa0575380:five_prime_UTR | 20.0% |
| !! | GAATATGAATATGAATATGA+AGG | + | chr4_1:79240594-79240613 | None:intergenic | 20.0% |
| !!! | CTTTTAATTGTTATGTCAAA+TGG | - | chr4_1:79241188-79241207 | Msa0575380:CDS | 20.0% |
| !! | TGAATTATTCTTTGATTAGT+TGG | - | chr4_1:79242442-79242461 | Msa0575380:five_prime_UTR | 20.0% |
| ! | ATATTCATTGCTTGTTTGTT+GGG | - | chr4_1:79240608-79240627 | Msa0575380:three_prime_UTR | 25.0% |
| ! | ATTACATCAATTTCTTTCCA+AGG | + | chr4_1:79240974-79240993 | None:intergenic | 25.0% |
| ! | ATTGATGTAATTGAAGAAGA+AGG | - | chr4_1:79240983-79241002 | Msa0575380:three_prime_UTR | 25.0% |
| ! | AAATTCACTTATCGTAACAA+GGG | - | chr4_1:79241335-79241354 | Msa0575380:intron | 25.0% |
| ! | ATATGATTATCGTGTAAACT+CGG | + | chr4_1:79241534-79241553 | None:intergenic | 25.0% |
| !! | TGTGTATCAATCTTTTTCTT+TGG | - | chr4_1:79241699-79241718 | Msa0575380:CDS | 25.0% |
| !! | GTGTATCAATCTTTTTCTTT+GGG | - | chr4_1:79241700-79241719 | Msa0575380:CDS | 25.0% |
| !!! | TGAAGAAGTTTTATCAATCA+AGG | - | chr4_1:79241737-79241756 | Msa0575380:CDS | 25.0% |
| !! | ATCTCAAAGCTCAATTTTAA+TGG | + | chr4_1:79241868-79241887 | None:intergenic | 25.0% |
| ! | CAAACCAAAATACTACAAAA+AGG | - | chr4_1:79241921-79241940 | Msa0575380:CDS | 25.0% |
| !! | TGAACCTTTTTGTAGTATTT+TGG | + | chr4_1:79241928-79241947 | None:intergenic | 25.0% |
| !!! | ACAGAAACATTGATTTTCTT+GGG | + | chr4_1:79241970-79241989 | None:intergenic | 25.0% |
| !!! | AACAGAAACATTGATTTTCT+TGG | + | chr4_1:79241971-79241990 | None:intergenic | 25.0% |
| ! | ATCATAGAAAAGTGATTCAT+TGG | - | chr4_1:79242078-79242097 | Msa0575380:CDS | 25.0% |
| ! | ATTGGTTGAGTAAAAAACAA+AGG | - | chr4_1:79242096-79242115 | Msa0575380:CDS | 25.0% |
| ! | TTGGTTGAGTAAAAAACAAA+GGG | - | chr4_1:79242097-79242116 | Msa0575380:CDS | 25.0% |
| ! | TAAAGAAAGAAAGACATGTT+TGG | - | chr4_1:79242213-79242232 | Msa0575380:CDS | 25.0% |
| ! | TATGTATTATAAGCTCCATA+TGG | - | chr4_1:79242479-79242498 | Msa0575380:five_prime_UTR | 25.0% |
| ! | ATGTATTATAAGCTCCATAT+GGG | - | chr4_1:79242480-79242499 | Msa0575380:five_prime_UTR | 25.0% |
| ! | ATATTCATTGCTTGTTTGTT+GGG | - | chr4_1:79240608-79240627 | Msa0575380:three_prime_UTR | 25.0% |
| ! | ATTACATCAATTTCTTTCCA+AGG | + | chr4_1:79240974-79240993 | None:intergenic | 25.0% |
| ! | ATTGATGTAATTGAAGAAGA+AGG | - | chr4_1:79240983-79241002 | Msa0575380:three_prime_UTR | 25.0% |
| ! | AAATTCACTTATCGTAACAA+GGG | - | chr4_1:79241335-79241354 | Msa0575380:intron | 25.0% |
| ! | ATATGATTATCGTGTAAACT+CGG | + | chr4_1:79241534-79241553 | None:intergenic | 25.0% |
| !! | TGTGTATCAATCTTTTTCTT+TGG | - | chr4_1:79241699-79241718 | Msa0575380:CDS | 25.0% |
| !! | GTGTATCAATCTTTTTCTTT+GGG | - | chr4_1:79241700-79241719 | Msa0575380:CDS | 25.0% |
| !!! | TGAAGAAGTTTTATCAATCA+AGG | - | chr4_1:79241737-79241756 | Msa0575380:CDS | 25.0% |
| !! | ATCTCAAAGCTCAATTTTAA+TGG | + | chr4_1:79241868-79241887 | None:intergenic | 25.0% |
| ! | CAAACCAAAATACTACAAAA+AGG | - | chr4_1:79241921-79241940 | Msa0575380:CDS | 25.0% |
| !! | TGAACCTTTTTGTAGTATTT+TGG | + | chr4_1:79241928-79241947 | None:intergenic | 25.0% |
| !!! | ACAGAAACATTGATTTTCTT+GGG | + | chr4_1:79241970-79241989 | None:intergenic | 25.0% |
| !!! | AACAGAAACATTGATTTTCT+TGG | + | chr4_1:79241971-79241990 | None:intergenic | 25.0% |
| ! | ATCATAGAAAAGTGATTCAT+TGG | - | chr4_1:79242078-79242097 | Msa0575380:CDS | 25.0% |
| ! | ATTGGTTGAGTAAAAAACAA+AGG | - | chr4_1:79242096-79242115 | Msa0575380:CDS | 25.0% |
| ! | TTGGTTGAGTAAAAAACAAA+GGG | - | chr4_1:79242097-79242116 | Msa0575380:CDS | 25.0% |
| ! | TAAAGAAAGAAAGACATGTT+TGG | - | chr4_1:79242213-79242232 | Msa0575380:CDS | 25.0% |
| ! | TATGTATTATAAGCTCCATA+TGG | - | chr4_1:79242479-79242498 | Msa0575380:five_prime_UTR | 25.0% |
| ! | ATGTATTATAAGCTCCATAT+GGG | - | chr4_1:79242480-79242499 | Msa0575380:five_prime_UTR | 25.0% |
| AGAAAGAGAAATTGCATTAG+TGG | + | chr4_1:79240555-79240574 | None:intergenic | 30.0% | |
| CATATTCATTGCTTGTTTGT+TGG | - | chr4_1:79240607-79240626 | Msa0575380:three_prime_UTR | 30.0% | |
| CTCTCAAACAAAAAGAAAAG+AGG | + | chr4_1:79240635-79240654 | None:intergenic | 30.0% | |
| TATTTCCTTGCTTTCATTCT+TGG | - | chr4_1:79241052-79241071 | Msa0575380:exon | 30.0% | |
| ! | TCTTTTCTCTCTTATCCTTT+GGG | - | chr4_1:79241093-79241112 | Msa0575380:CDS | 30.0% |
| TATACCTTAATCATGACATG+GGG | + | chr4_1:79241139-79241158 | None:intergenic | 30.0% | |
| GTATACCTTAATCATGACAT+GGG | + | chr4_1:79241140-79241159 | None:intergenic | 30.0% | |
| AGTATACCTTAATCATGACA+TGG | + | chr4_1:79241141-79241160 | None:intergenic | 30.0% | |
| ATTCACTGTAATCATATCAG+TGG | + | chr4_1:79241306-79241325 | None:intergenic | 30.0% | |
| GAAATTCACTTATCGTAACA+AGG | - | chr4_1:79241334-79241353 | Msa0575380:intron | 30.0% | |
| TCTGAATAGGATAGATCTAA+AGG | + | chr4_1:79241392-79241411 | None:intergenic | 30.0% | |
| TCCTATTCAGAAATCGTAAT+TGG | - | chr4_1:79241401-79241420 | Msa0575380:intron | 30.0% | |
| GAATTCAGATTGATTGCAAT+TGG | - | chr4_1:79241502-79241521 | Msa0575380:intron | 30.0% | |
| TATGATTATCGTGTAAACTC+GGG | + | chr4_1:79241533-79241552 | None:intergenic | 30.0% | |
| !! | AGAAGTTTTATCAATCAAGG+AGG | - | chr4_1:79241740-79241759 | Msa0575380:CDS | 30.0% |
| TGGTTGAGTAAAAAACAAAG+GGG | - | chr4_1:79242098-79242117 | Msa0575380:CDS | 30.0% | |
| AAGAAAGACATGTTTGGATT+CGG | - | chr4_1:79242219-79242238 | Msa0575380:CDS | 30.0% | |
| !! | TTTAATTTTGTCCCATCATG+TGG | - | chr4_1:79242281-79242300 | Msa0575380:CDS | 30.0% |
| TAACCTTATTACCACATGAT+GGG | + | chr4_1:79242295-79242314 | None:intergenic | 30.0% | |
| TTAACCTTATTACCACATGA+TGG | + | chr4_1:79242296-79242315 | None:intergenic | 30.0% | |
| ATCATGTGGTAATAAGGTTA+AGG | - | chr4_1:79242295-79242314 | Msa0575380:CDS | 30.0% | |
| AACGAATGATTCAACTGTTT+CGG | + | chr4_1:79242397-79242416 | None:intergenic | 30.0% | |
| AGAAAGAGAAATTGCATTAG+TGG | + | chr4_1:79240555-79240574 | None:intergenic | 30.0% | |
| CATATTCATTGCTTGTTTGT+TGG | - | chr4_1:79240607-79240626 | Msa0575380:three_prime_UTR | 30.0% | |
| CTCTCAAACAAAAAGAAAAG+AGG | + | chr4_1:79240635-79240654 | None:intergenic | 30.0% | |
| TATTTCCTTGCTTTCATTCT+TGG | - | chr4_1:79241052-79241071 | Msa0575380:exon | 30.0% | |
| ! | TCTTTTCTCTCTTATCCTTT+GGG | - | chr4_1:79241093-79241112 | Msa0575380:CDS | 30.0% |
| TATACCTTAATCATGACATG+GGG | + | chr4_1:79241139-79241158 | None:intergenic | 30.0% | |
| GTATACCTTAATCATGACAT+GGG | + | chr4_1:79241140-79241159 | None:intergenic | 30.0% | |
| AGTATACCTTAATCATGACA+TGG | + | chr4_1:79241141-79241160 | None:intergenic | 30.0% | |
| ATTCACTGTAATCATATCAG+TGG | + | chr4_1:79241306-79241325 | None:intergenic | 30.0% | |
| GAAATTCACTTATCGTAACA+AGG | - | chr4_1:79241334-79241353 | Msa0575380:intron | 30.0% | |
| TCTGAATAGGATAGATCTAA+AGG | + | chr4_1:79241392-79241411 | None:intergenic | 30.0% | |
| TCCTATTCAGAAATCGTAAT+TGG | - | chr4_1:79241401-79241420 | Msa0575380:intron | 30.0% | |
| GAATTCAGATTGATTGCAAT+TGG | - | chr4_1:79241502-79241521 | Msa0575380:intron | 30.0% | |
| TATGATTATCGTGTAAACTC+GGG | + | chr4_1:79241533-79241552 | None:intergenic | 30.0% | |
| !! | AGAAGTTTTATCAATCAAGG+AGG | - | chr4_1:79241740-79241759 | Msa0575380:CDS | 30.0% |
| TGGTTGAGTAAAAAACAAAG+GGG | - | chr4_1:79242098-79242117 | Msa0575380:CDS | 30.0% | |
| AAGAAAGACATGTTTGGATT+CGG | - | chr4_1:79242219-79242238 | Msa0575380:CDS | 30.0% | |
| !! | TTTAATTTTGTCCCATCATG+TGG | - | chr4_1:79242281-79242300 | Msa0575380:CDS | 30.0% |
| TAACCTTATTACCACATGAT+GGG | + | chr4_1:79242295-79242314 | None:intergenic | 30.0% | |
| TTAACCTTATTACCACATGA+TGG | + | chr4_1:79242296-79242315 | None:intergenic | 30.0% | |
| ATCATGTGGTAATAAGGTTA+AGG | - | chr4_1:79242295-79242314 | Msa0575380:CDS | 30.0% | |
| AACGAATGATTCAACTGTTT+CGG | + | chr4_1:79242397-79242416 | None:intergenic | 30.0% | |
| AGTACGTAGTAGATTAGATC+TGG | + | chr4_1:79240685-79240704 | None:intergenic | 35.0% | |
| !!! | AGTGGTTTTTTCACCATCAT+GGG | + | chr4_1:79240831-79240850 | None:intergenic | 35.0% |
| !!! | TAGTGGTTTTTTCACCATCA+TGG | + | chr4_1:79240832-79240851 | None:intergenic | 35.0% |
| GATAACAGGAGTAGAATGAA+AGG | + | chr4_1:79240858-79240877 | None:intergenic | 35.0% | |
| ATCAATTTCTTTCCAAGGCT+TGG | + | chr4_1:79240969-79240988 | None:intergenic | 35.0% | |
| AAAAGCCAAGAATGAAAGCA+AGG | + | chr4_1:79241060-79241079 | None:intergenic | 35.0% | |
| GAGAGAAAAGAGTGAACAAA+AGG | + | chr4_1:79241084-79241103 | None:intergenic | 35.0% | |
| ! | CTCTTTTCTCTCTTATCCTT+TGG | - | chr4_1:79241092-79241111 | Msa0575380:CDS | 35.0% |
| ! | CTTTTCTCTCTTATCCTTTG+GGG | - | chr4_1:79241094-79241113 | Msa0575380:CDS | 35.0% |
| ATAGGATAGATCTAAAGGTG+TGG | + | chr4_1:79241387-79241406 | None:intergenic | 35.0% | |
| GCCAATTACGATTTCTGAAT+AGG | + | chr4_1:79241405-79241424 | None:intergenic | 35.0% | |
| ACAACAATCGATACACTGAT+TGG | - | chr4_1:79241611-79241630 | Msa0575380:intron | 35.0% | |
| !! | TTTAATGGCACTGGTAAAGT+TGG | + | chr4_1:79241853-79241872 | None:intergenic | 35.0% |
| !! | AAGCTCAATTTTAATGGCAC+TGG | + | chr4_1:79241862-79241881 | None:intergenic | 35.0% |
| CAGCTCATAGGAATAAGAAA+TGG | - | chr4_1:79242124-79242143 | Msa0575380:CDS | 35.0% | |
| ! | AATGGAAAAACGCGTTTTTG+TGG | - | chr4_1:79242142-79242161 | Msa0575380:CDS | 35.0% |
| ! | ATGGAAAAACGCGTTTTTGT+GGG | - | chr4_1:79242143-79242162 | Msa0575380:CDS | 35.0% |
| CTACTAGAACTTAGAGAATG+TGG | + | chr4_1:79242191-79242210 | None:intergenic | 35.0% | |
| AGTACGTAGTAGATTAGATC+TGG | + | chr4_1:79240685-79240704 | None:intergenic | 35.0% | |
| !!! | AGTGGTTTTTTCACCATCAT+GGG | + | chr4_1:79240831-79240850 | None:intergenic | 35.0% |
| !!! | TAGTGGTTTTTTCACCATCA+TGG | + | chr4_1:79240832-79240851 | None:intergenic | 35.0% |
| GATAACAGGAGTAGAATGAA+AGG | + | chr4_1:79240858-79240877 | None:intergenic | 35.0% | |
| ATCAATTTCTTTCCAAGGCT+TGG | + | chr4_1:79240969-79240988 | None:intergenic | 35.0% | |
| AAAAGCCAAGAATGAAAGCA+AGG | + | chr4_1:79241060-79241079 | None:intergenic | 35.0% | |
| GAGAGAAAAGAGTGAACAAA+AGG | + | chr4_1:79241084-79241103 | None:intergenic | 35.0% | |
| ! | CTCTTTTCTCTCTTATCCTT+TGG | - | chr4_1:79241092-79241111 | Msa0575380:CDS | 35.0% |
| ! | CTTTTCTCTCTTATCCTTTG+GGG | - | chr4_1:79241094-79241113 | Msa0575380:CDS | 35.0% |
| ATAGGATAGATCTAAAGGTG+TGG | + | chr4_1:79241387-79241406 | None:intergenic | 35.0% | |
| GCCAATTACGATTTCTGAAT+AGG | + | chr4_1:79241405-79241424 | None:intergenic | 35.0% | |
| ACAACAATCGATACACTGAT+TGG | - | chr4_1:79241611-79241630 | Msa0575380:intron | 35.0% | |
| !! | TTTAATGGCACTGGTAAAGT+TGG | + | chr4_1:79241853-79241872 | None:intergenic | 35.0% |
| !! | AAGCTCAATTTTAATGGCAC+TGG | + | chr4_1:79241862-79241881 | None:intergenic | 35.0% |
| CAGCTCATAGGAATAAGAAA+TGG | - | chr4_1:79242124-79242143 | Msa0575380:CDS | 35.0% | |
| ! | AATGGAAAAACGCGTTTTTG+TGG | - | chr4_1:79242142-79242161 | Msa0575380:CDS | 35.0% |
| ! | ATGGAAAAACGCGTTTTTGT+GGG | - | chr4_1:79242143-79242162 | Msa0575380:CDS | 35.0% |
| CTACTAGAACTTAGAGAATG+TGG | + | chr4_1:79242191-79242210 | None:intergenic | 35.0% | |
| AGTAGATTAGATCTGGTGAG+TGG | + | chr4_1:79240678-79240697 | None:intergenic | 40.0% | |
| GGACTTTGAACATAGTATGC+TGG | + | chr4_1:79240806-79240825 | None:intergenic | 40.0% | |
| !!! | GTTTTTTCACCATCATGGGA+TGG | + | chr4_1:79240827-79240846 | None:intergenic | 40.0% |
| AGTAGAATGAAAGGAGGTAG+TGG | + | chr4_1:79240849-79240868 | None:intergenic | 40.0% | |
| AACAGGAGTAGAATGAAAGG+AGG | + | chr4_1:79240855-79240874 | None:intergenic | 40.0% | |
| ATCATTCTCTTTCTCGTCGT+TGG | - | chr4_1:79241029-79241048 | Msa0575380:three_prime_UTR | 40.0% | |
| ATCATGACATGGGGTTTCAT+GGG | + | chr4_1:79241130-79241149 | None:intergenic | 40.0% | |
| AATCATGACATGGGGTTTCA+TGG | + | chr4_1:79241131-79241150 | None:intergenic | 40.0% | |
| GAAACCCCATGTCATGATTA+AGG | - | chr4_1:79241132-79241151 | Msa0575380:CDS | 40.0% | |
| !!! | CGTAACAAGGGCACATTTTT+TGG | - | chr4_1:79241347-79241366 | Msa0575380:intron | 40.0% |
| TCAGAAATCGTAATTGGCAC+TGG | - | chr4_1:79241407-79241426 | Msa0575380:intron | 40.0% | |
| GTGTCAATGTTGTGTATGTC+TGG | - | chr4_1:79241464-79241483 | Msa0575380:intron | 40.0% | |
| GTCACTAGATCGAGATTGAA+TGG | - | chr4_1:79241562-79241581 | Msa0575380:intron | 40.0% | |
| GAGTCAAAGATTAGTGAGTG+TGG | - | chr4_1:79241762-79241781 | Msa0575380:CDS | 40.0% | |
| AAGATCCCATTGTATGGAAG+TGG | - | chr4_1:79241799-79241818 | Msa0575380:CDS | 40.0% | |
| TAGCACCACTTCCATACAAT+GGG | + | chr4_1:79241807-79241826 | None:intergenic | 40.0% | |
| ! | AGATCTAGAGCTTATGTGCT+TGG | - | chr4_1:79241889-79241908 | Msa0575380:intron | 40.0% |
| ! | GATCTAGAGCTTATGTGCTT+GGG | - | chr4_1:79241890-79241909 | Msa0575380:intron | 40.0% |
| AGCTTATGTGCTTGGGAAAT+TGG | - | chr4_1:79241897-79241916 | Msa0575380:intron | 40.0% | |
| !! | ATAGGTGCAAGACTTGTTGA+GGG | + | chr4_1:79241995-79242014 | None:intergenic | 40.0% |
| TTGCACCTATGATTGAGAAG+TGG | - | chr4_1:79242005-79242024 | Msa0575380:CDS | 40.0% | |
| CCATTCCACTTCTCAATCAT+AGG | + | chr4_1:79242013-79242032 | None:intergenic | 40.0% | |
| CCTATGATTGAGAAGTGGAA+TGG | - | chr4_1:79242010-79242029 | Msa0575380:CDS | 40.0% | |
| TGATTGAGAAGTGGAATGGA+AGG | - | chr4_1:79242014-79242033 | Msa0575380:CDS | 40.0% | |
| ! | AAGGAAGATGAAGAAGCACA+TGG | - | chr4_1:79242033-79242052 | Msa0575380:CDS | 40.0% |
| ! | GATGAAGAAGCACATGGAAA+TGG | - | chr4_1:79242039-79242058 | Msa0575380:CDS | 40.0% |
| GAAGCACATGGAAATGGAAA+TGG | - | chr4_1:79242045-79242064 | Msa0575380:CDS | 40.0% | |
| AAAGACATGTTTGGATTCGG+TGG | - | chr4_1:79242222-79242241 | Msa0575380:CDS | 40.0% | |
| TGTCCCATCATGTGGTAATA+AGG | - | chr4_1:79242289-79242308 | Msa0575380:CDS | 40.0% | |
| ! | TGAAGTCACCGATTGTAAGA+TGG | - | chr4_1:79242503-79242522 | Msa0575380:five_prime_UTR | 40.0% |
| AGTAGATTAGATCTGGTGAG+TGG | + | chr4_1:79240678-79240697 | None:intergenic | 40.0% | |
| GGACTTTGAACATAGTATGC+TGG | + | chr4_1:79240806-79240825 | None:intergenic | 40.0% | |
| !!! | GTTTTTTCACCATCATGGGA+TGG | + | chr4_1:79240827-79240846 | None:intergenic | 40.0% |
| AGTAGAATGAAAGGAGGTAG+TGG | + | chr4_1:79240849-79240868 | None:intergenic | 40.0% | |
| AACAGGAGTAGAATGAAAGG+AGG | + | chr4_1:79240855-79240874 | None:intergenic | 40.0% | |
| ATCATTCTCTTTCTCGTCGT+TGG | - | chr4_1:79241029-79241048 | Msa0575380:three_prime_UTR | 40.0% | |
| ATCATGACATGGGGTTTCAT+GGG | + | chr4_1:79241130-79241149 | None:intergenic | 40.0% | |
| AATCATGACATGGGGTTTCA+TGG | + | chr4_1:79241131-79241150 | None:intergenic | 40.0% | |
| GAAACCCCATGTCATGATTA+AGG | - | chr4_1:79241132-79241151 | Msa0575380:CDS | 40.0% | |
| !!! | CGTAACAAGGGCACATTTTT+TGG | - | chr4_1:79241347-79241366 | Msa0575380:intron | 40.0% |
| TCAGAAATCGTAATTGGCAC+TGG | - | chr4_1:79241407-79241426 | Msa0575380:intron | 40.0% | |
| GTGTCAATGTTGTGTATGTC+TGG | - | chr4_1:79241464-79241483 | Msa0575380:intron | 40.0% | |
| GTCACTAGATCGAGATTGAA+TGG | - | chr4_1:79241562-79241581 | Msa0575380:intron | 40.0% | |
| GAGTCAAAGATTAGTGAGTG+TGG | - | chr4_1:79241762-79241781 | Msa0575380:CDS | 40.0% | |
| AAGATCCCATTGTATGGAAG+TGG | - | chr4_1:79241799-79241818 | Msa0575380:CDS | 40.0% | |
| TAGCACCACTTCCATACAAT+GGG | + | chr4_1:79241807-79241826 | None:intergenic | 40.0% | |
| ! | AGATCTAGAGCTTATGTGCT+TGG | - | chr4_1:79241889-79241908 | Msa0575380:intron | 40.0% |
| ! | GATCTAGAGCTTATGTGCTT+GGG | - | chr4_1:79241890-79241909 | Msa0575380:intron | 40.0% |
| AGCTTATGTGCTTGGGAAAT+TGG | - | chr4_1:79241897-79241916 | Msa0575380:intron | 40.0% | |
| !! | ATAGGTGCAAGACTTGTTGA+GGG | + | chr4_1:79241995-79242014 | None:intergenic | 40.0% |
| TTGCACCTATGATTGAGAAG+TGG | - | chr4_1:79242005-79242024 | Msa0575380:CDS | 40.0% | |
| CCATTCCACTTCTCAATCAT+AGG | + | chr4_1:79242013-79242032 | None:intergenic | 40.0% | |
| CCTATGATTGAGAAGTGGAA+TGG | - | chr4_1:79242010-79242029 | Msa0575380:CDS | 40.0% | |
| TGATTGAGAAGTGGAATGGA+AGG | - | chr4_1:79242014-79242033 | Msa0575380:CDS | 40.0% | |
| ! | AAGGAAGATGAAGAAGCACA+TGG | - | chr4_1:79242033-79242052 | Msa0575380:CDS | 40.0% |
| ! | GATGAAGAAGCACATGGAAA+TGG | - | chr4_1:79242039-79242058 | Msa0575380:CDS | 40.0% |
| GAAGCACATGGAAATGGAAA+TGG | - | chr4_1:79242045-79242064 | Msa0575380:CDS | 40.0% | |
| AAAGACATGTTTGGATTCGG+TGG | - | chr4_1:79242222-79242241 | Msa0575380:CDS | 40.0% | |
| TGTCCCATCATGTGGTAATA+AGG | - | chr4_1:79242289-79242308 | Msa0575380:CDS | 40.0% | |
| ! | TGAAGTCACCGATTGTAAGA+TGG | - | chr4_1:79242503-79242522 | Msa0575380:five_prime_UTR | 40.0% |
| GCATACAAAGACAGACTCAG+AGG | - | chr4_1:79240736-79240755 | Msa0575380:three_prime_UTR | 45.0% | |
| TGTGGATGATGCATCTAAGC+TGG | + | chr4_1:79240765-79240784 | None:intergenic | 45.0% | |
| GTTCAAAGTCCATCCCATGA+TGG | - | chr4_1:79240815-79240834 | Msa0575380:three_prime_UTR | 45.0% | |
| TACTCCTGTTATCAGCCCAA+TGG | - | chr4_1:79240865-79240884 | Msa0575380:three_prime_UTR | 45.0% | |
| ACTCCTGTTATCAGCCCAAT+GGG | - | chr4_1:79240866-79240885 | Msa0575380:three_prime_UTR | 45.0% | |
| AATGAGGAGGAGAACCCATT+GGG | + | chr4_1:79240883-79240902 | None:intergenic | 45.0% | |
| CTAGAGGAAGAGTGAGAATG+AGG | + | chr4_1:79240899-79240918 | None:intergenic | 45.0% | |
| ! | GTGGTTGTTGTTGAGTTTCC+GGG | + | chr4_1:79240936-79240955 | None:intergenic | 45.0% |
| ! | GGTGGTTGTTGTTGAGTTTC+CGG | + | chr4_1:79240937-79240956 | None:intergenic | 45.0% |
| !! | TCCAAGGCTTGGTGTTACTA+CGG | + | chr4_1:79240958-79240977 | None:intergenic | 45.0% |
| GAGCATGTTAGAGTTCAAGC+TGG | - | chr4_1:79241260-79241279 | Msa0575380:CDS | 45.0% | |
| AATCATATCAGTGGCCACAC+CGG | + | chr4_1:79241297-79241316 | None:intergenic | 45.0% | |
| ATTAGTGAGTGTGGCAGTGA+TGG | - | chr4_1:79241771-79241790 | Msa0575380:CDS | 45.0% | |
| TTAGTGAGTGTGGCAGTGAT+GGG | - | chr4_1:79241772-79241791 | Msa0575380:CDS | 45.0% | |
| GGAAGCAAGATCCCATTGTA+TGG | - | chr4_1:79241793-79241812 | Msa0575380:CDS | 45.0% | |
| CTAGCACCACTTCCATACAA+TGG | + | chr4_1:79241808-79241827 | None:intergenic | 45.0% | |
| !! | CATAGGTGCAAGACTTGTTG+AGG | + | chr4_1:79241996-79242015 | None:intergenic | 45.0% |
| ACAAAGGGGATACAGCTCAT+AGG | - | chr4_1:79242112-79242131 | Msa0575380:CDS | 45.0% | |
| ! | ACGCGTTTTTGTGGGACTTT+TGG | - | chr4_1:79242151-79242170 | Msa0575380:CDS | 45.0% |
| AATCGGTGACTTCACCCATA+TGG | + | chr4_1:79242497-79242516 | None:intergenic | 45.0% | |
| CAAGCTGGCCATCTTACAAT+CGG | + | chr4_1:79242514-79242533 | None:intergenic | 45.0% | |
| GCATACAAAGACAGACTCAG+AGG | - | chr4_1:79240736-79240755 | Msa0575380:three_prime_UTR | 45.0% | |
| TGTGGATGATGCATCTAAGC+TGG | + | chr4_1:79240765-79240784 | None:intergenic | 45.0% | |
| GTTCAAAGTCCATCCCATGA+TGG | - | chr4_1:79240815-79240834 | Msa0575380:three_prime_UTR | 45.0% | |
| TACTCCTGTTATCAGCCCAA+TGG | - | chr4_1:79240865-79240884 | Msa0575380:three_prime_UTR | 45.0% | |
| ACTCCTGTTATCAGCCCAAT+GGG | - | chr4_1:79240866-79240885 | Msa0575380:three_prime_UTR | 45.0% | |
| AATGAGGAGGAGAACCCATT+GGG | + | chr4_1:79240883-79240902 | None:intergenic | 45.0% | |
| CTAGAGGAAGAGTGAGAATG+AGG | + | chr4_1:79240899-79240918 | None:intergenic | 45.0% | |
| ! | GTGGTTGTTGTTGAGTTTCC+GGG | + | chr4_1:79240936-79240955 | None:intergenic | 45.0% |
| ! | GGTGGTTGTTGTTGAGTTTC+CGG | + | chr4_1:79240937-79240956 | None:intergenic | 45.0% |
| !! | TCCAAGGCTTGGTGTTACTA+CGG | + | chr4_1:79240958-79240977 | None:intergenic | 45.0% |
| GAGCATGTTAGAGTTCAAGC+TGG | - | chr4_1:79241260-79241279 | Msa0575380:CDS | 45.0% | |
| AATCATATCAGTGGCCACAC+CGG | + | chr4_1:79241297-79241316 | None:intergenic | 45.0% | |
| ATTAGTGAGTGTGGCAGTGA+TGG | - | chr4_1:79241771-79241790 | Msa0575380:CDS | 45.0% | |
| TTAGTGAGTGTGGCAGTGAT+GGG | - | chr4_1:79241772-79241791 | Msa0575380:CDS | 45.0% | |
| GGAAGCAAGATCCCATTGTA+TGG | - | chr4_1:79241793-79241812 | Msa0575380:CDS | 45.0% | |
| CTAGCACCACTTCCATACAA+TGG | + | chr4_1:79241808-79241827 | None:intergenic | 45.0% | |
| !! | CATAGGTGCAAGACTTGTTG+AGG | + | chr4_1:79241996-79242015 | None:intergenic | 45.0% |
| ACAAAGGGGATACAGCTCAT+AGG | - | chr4_1:79242112-79242131 | Msa0575380:CDS | 45.0% | |
| ! | ACGCGTTTTTGTGGGACTTT+TGG | - | chr4_1:79242151-79242170 | Msa0575380:CDS | 45.0% |
| AATCGGTGACTTCACCCATA+TGG | + | chr4_1:79242497-79242516 | None:intergenic | 45.0% | |
| CAAGCTGGCCATCTTACAAT+CGG | + | chr4_1:79242514-79242533 | None:intergenic | 45.0% | |
| TCGACGAGGAGATCTTGTTG+TGG | + | chr4_1:79240783-79240802 | None:intergenic | 50.0% | |
| ACATAGTATGCTGGTCGACG+AGG | + | chr4_1:79240797-79240816 | None:intergenic | 50.0% | |
| GAACCCATTGGGCTGATAAC+AGG | + | chr4_1:79240872-79240891 | None:intergenic | 50.0% | |
| GAATGAGGAGGAGAACCCAT+TGG | + | chr4_1:79240884-79240903 | None:intergenic | 50.0% | |
| GAGGAAGAGTGAGAATGAGG+AGG | + | chr4_1:79240896-79240915 | None:intergenic | 50.0% | |
| TCTTCCTCTAGCCGTTTCTC+TGG | - | chr4_1:79240908-79240927 | Msa0575380:three_prime_UTR | 50.0% | |
| GTTTCCGGGAACCAGAGAAA+CGG | + | chr4_1:79240922-79240941 | None:intergenic | 50.0% | |
| !! | AAGGCTTGGTGTTACTACGG+TGG | + | chr4_1:79240955-79240974 | None:intergenic | 50.0% |
| ACCGTAGTAACACCAAGCCT+TGG | - | chr4_1:79240954-79240973 | Msa0575380:three_prime_UTR | 50.0% | |
| ! | CAAGCTGGTTCAGATGCAAC+CGG | - | chr4_1:79241275-79241294 | Msa0575380:CDS | 50.0% |
| !! | GCTAGTCTTAGCAGCACAAC+TGG | - | chr4_1:79241823-79241842 | Msa0575380:intron | 50.0% |
| TCGACGAGGAGATCTTGTTG+TGG | + | chr4_1:79240783-79240802 | None:intergenic | 50.0% | |
| ACATAGTATGCTGGTCGACG+AGG | + | chr4_1:79240797-79240816 | None:intergenic | 50.0% | |
| GAACCCATTGGGCTGATAAC+AGG | + | chr4_1:79240872-79240891 | None:intergenic | 50.0% | |
| GAATGAGGAGGAGAACCCAT+TGG | + | chr4_1:79240884-79240903 | None:intergenic | 50.0% | |
| GAGGAAGAGTGAGAATGAGG+AGG | + | chr4_1:79240896-79240915 | None:intergenic | 50.0% | |
| TCTTCCTCTAGCCGTTTCTC+TGG | - | chr4_1:79240908-79240927 | Msa0575380:three_prime_UTR | 50.0% | |
| GTTTCCGGGAACCAGAGAAA+CGG | + | chr4_1:79240922-79240941 | None:intergenic | 50.0% | |
| !! | AAGGCTTGGTGTTACTACGG+TGG | + | chr4_1:79240955-79240974 | None:intergenic | 50.0% |
| ACCGTAGTAACACCAAGCCT+TGG | - | chr4_1:79240954-79240973 | Msa0575380:three_prime_UTR | 50.0% | |
| ! | CAAGCTGGTTCAGATGCAAC+CGG | - | chr4_1:79241275-79241294 | Msa0575380:CDS | 50.0% |
| !! | GCTAGTCTTAGCAGCACAAC+TGG | - | chr4_1:79241823-79241842 | Msa0575380:intron | 50.0% |
| GGAACCAGAGAAACGGCTAG+AGG | + | chr4_1:79240915-79240934 | None:intergenic | 55.0% | |
| ! | CTAGCCGTTTCTCTGGTTCC+CGG | - | chr4_1:79240915-79240934 | Msa0575380:three_prime_UTR | 55.0% |
| TGGTTCAGATGCAACCGGTG+TGG | - | chr4_1:79241280-79241299 | Msa0575380:CDS | 55.0% | |
| GGAACCAGAGAAACGGCTAG+AGG | + | chr4_1:79240915-79240934 | None:intergenic | 55.0% | |
| ! | CTAGCCGTTTCTCTGGTTCC+CGG | - | chr4_1:79240915-79240934 | Msa0575380:three_prime_UTR | 55.0% |
| TGGTTCAGATGCAACCGGTG+TGG | - | chr4_1:79241280-79241299 | Msa0575380:CDS | 55.0% | |
| TGGGTCTGCTAGCACCCCAA+AGG | + | chr4_1:79241111-79241130 | None:intergenic | 60.0% | |
| GCGGTGTGTGTGGAACAAGC+TGG | + | chr4_1:79242529-79242548 | None:intergenic | 60.0% | |
| TGGGTCTGCTAGCACCCCAA+AGG | + | chr4_1:79241111-79241130 | None:intergenic | 60.0% | |
| GCGGTGTGTGTGGAACAAGC+TGG | + | chr4_1:79242529-79242548 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 79240517 | 79242557 | 79240517 | ID=Msa0575380;Name=Msa0575380 |
| chr4_1 | mRNA | 79240517 | 79242557 | 79240517 | ID=Msa0575380-mRNA-1;Parent=Msa0575380;Name=Msa0575380-mRNA-1;_AED=0.04;_eAED=0.04;_QI=217|1|1|1|1|1|3|537|296 |
| chr4_1 | exon | 79240517 | 79241338 | 79240517 | ID=Msa0575380-mRNA-1:exon:28219;Parent=Msa0575380-mRNA-1 |
| chr4_1 | exon | 79241641 | 79241826 | 79241641 | ID=Msa0575380-mRNA-1:exon:28218;Parent=Msa0575380-mRNA-1 |
| chr4_1 | exon | 79241921 | 79242557 | 79241921 | ID=Msa0575380-mRNA-1:exon:28217;Parent=Msa0575380-mRNA-1 |
| chr4_1 | five_prime_UTR | 79242341 | 79242557 | 79242341 | ID=Msa0575380-mRNA-1:five_prime_utr;Parent=Msa0575380-mRNA-1 |
| chr4_1 | CDS | 79241921 | 79242340 | 79241921 | ID=Msa0575380-mRNA-1:cds;Parent=Msa0575380-mRNA-1 |
| chr4_1 | CDS | 79241641 | 79241826 | 79241641 | ID=Msa0575380-mRNA-1:cds;Parent=Msa0575380-mRNA-1 |
| chr4_1 | CDS | 79241054 | 79241338 | 79241054 | ID=Msa0575380-mRNA-1:cds;Parent=Msa0575380-mRNA-1 |
| chr4_1 | three_prime_UTR | 79240517 | 79241053 | 79240517 | ID=Msa0575380-mRNA-1:three_prime_utr;Parent=Msa0575380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
