Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0611980 | XP_003608060.1 | 93.514 | 663 | 27 | 5 | 1 | 657 | 1 | 653 | 0.0 | 1124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0611980 | sp|Q8L3P4|THAL_ARATH | 42.446 | 695 | 319 | 19 | 1 | 655 | 1 | 654 | 3.11e-124 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0611980 | Msa1081980 | 0.800780 | 1.227345e-48 | -8.615850e-47 |
| Msa0150300 | Msa0611980 | 0.805540 | 1.270968e-49 | -8.615850e-47 |
| Msa0309770 | Msa0611980 | 0.808551 | 2.929814e-50 | -8.615850e-47 |
| Msa0553050 | Msa0611980 | 0.826556 | 2.542736e-54 | -8.615850e-47 |
| Msa0557070 | Msa0611980 | 0.806664 | 7.369319e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0611980 | MtrunA17_Chr4g0045541 | 93.514 | 663 | 27 | 5 | 1 | 657 | 1 | 653 | 0.0 | 1124 |
| Msa0611980 | MtrunA17_Chr5g0447351 | 61.826 | 241 | 63 | 4 | 423 | 657 | 12 | 229 | 1.74e-80 | 254 |
| Msa0611980 | MtrunA17_Chr3g0132641 | 31.193 | 109 | 74 | 1 | 224 | 332 | 16 | 123 | 1.14e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0611980 | AT2G43650.1 | 42.446 | 695 | 319 | 19 | 1 | 655 | 1 | 654 | 3.16e-125 | 385 |
| Msa0611980 | AT3G28230.2 | 56.410 | 117 | 48 | 2 | 541 | 657 | 61 | 174 | 1.94e-27 | 109 |
| Msa0611980 | AT3G28230.1 | 56.410 | 117 | 48 | 2 | 541 | 657 | 60 | 173 | 1.98e-27 | 109 |
| Msa0611980 | AT1G07840.2 | 26.119 | 134 | 99 | 0 | 213 | 346 | 4 | 137 | 3.56e-15 | 77.4 |
| Msa0611980 | AT1G07840.1 | 26.119 | 134 | 99 | 0 | 213 | 346 | 4 | 137 | 3.56e-15 | 77.4 |
| Msa0611980 | AT1G07840.3 | 26.119 | 134 | 99 | 0 | 213 | 346 | 4 | 137 | 5.55e-15 | 76.3 |
Find 166 sgRNAs with CRISPR-Local
Find 621 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCAGTTGGGAGGGGTATT+AGG | 0.124811 | 4_2:-60351947 | None:intergenic |
| ATCTCTTGTGAAGGTTAAAA+AGG | 0.178594 | 4_2:+60355325 | Msa0611980:intron |
| CAATTTCTTCCTCTTCCTTT+GGG | 0.184787 | 4_2:-60353198 | None:intergenic |
| AACATCTTTGGCATATTAAA+TGG | 0.208397 | 4_2:+60360939 | Msa0611980:three_prime_UTR |
| GACAACCAATCAACTAATTC+TGG | 0.211578 | 4_2:-60354623 | None:intergenic |
| GTATTAGGGTTTATGAATTA+TGG | 0.213123 | 4_2:-60351932 | None:intergenic |
| GATGATGCTGTGGTTGTTAA+TGG | 0.242057 | 4_2:+60358590 | Msa0611980:CDS |
| GGCAAGGAGAAGGGCTTTAT+TGG | 0.247022 | 4_2:+60352584 | Msa0611980:CDS |
| GCAATTTCTTCCTCTTCCTT+TGG | 0.261826 | 4_2:-60353199 | None:intergenic |
| GAACTTATCACCTGCTTAGA+TGG | 0.266542 | 4_2:+60360882 | Msa0611980:three_prime_UTR |
| AGCACCTTGTAGTTCTTTCT+AGG | 0.266803 | 4_2:-60360575 | None:intergenic |
| CGCAGTTGGGAGGGGTATTA+GGG | 0.269025 | 4_2:-60351946 | None:intergenic |
| GATTGGAAACTTAACATCTT+TGG | 0.300947 | 4_2:+60360927 | Msa0611980:three_prime_UTR |
| GCAGGTGATAAGTTCAAAAT+TGG | 0.313202 | 4_2:-60360874 | None:intergenic |
| ATAACCTTATCATTGAAAAT+AGG | 0.328888 | 4_2:-60352380 | None:intergenic |
| CTGTCCCTTGCGATTCTTAA+CGG | 0.332149 | 4_2:-60360714 | None:intergenic |
| GTAAAATACCCGAGAGAAAC+TGG | 0.341689 | 4_2:+60351848 | None:intergenic |
| GCTACAGACTTCACTGCTAT+TGG | 0.346061 | 4_2:-60351884 | None:intergenic |
| TCTTCAAGGCGAGCTATTAC+AGG | 0.346861 | 4_2:-60355473 | None:intergenic |
| TCACGAATAGCGTCTCTCTT+AGG | 0.351316 | 4_2:-60360051 | None:intergenic |
| GATCAAGGAATTAATGAATC+AGG | 0.364978 | 4_2:+60355496 | Msa0611980:CDS |
| ATCACTACCACTGCTTCTTC+TGG | 0.366961 | 4_2:-60358048 | None:intergenic |
| TCCCCGCCATAAGGTGCATT+TGG | 0.375526 | 4_2:-60360755 | None:intergenic |
| TCAGTCGAAGTATCAGATTC+AGG | 0.375688 | 4_2:+60360801 | Msa0611980:CDS |
| TTAATTCCTTGATCTCTTCA+AGG | 0.381679 | 4_2:-60355487 | None:intergenic |
| TAACTTGTATAATTATTGAT+TGG | 0.392558 | 4_2:+60360910 | Msa0611980:three_prime_UTR |
| AGAATGTCCTCAAGTTCAAC+TGG | 0.400387 | 4_2:-60357913 | None:intergenic |
| GGACTTGAGTAGAAGGTAGA+AGG | 0.410082 | 4_2:-60355426 | None:intergenic |
| AGAAGGCCAAATGCACCTTA+TGG | 0.411416 | 4_2:+60360749 | Msa0611980:CDS |
| ATGATGCTGTGGTTGTTAAT+GGG | 0.413234 | 4_2:+60358591 | Msa0611980:CDS |
| GCCCTTCGGACTTGAGTAGA+AGG | 0.419489 | 4_2:-60355433 | None:intergenic |
| CTTTCGTCTTCTTCAACCTC+CGG | 0.423727 | 4_2:+60352007 | Msa0611980:five_prime_UTR |
| AGCTGCAAAACGCGCTGCAA+AGG | 0.440245 | 4_2:+60360245 | Msa0611980:CDS |
| CTGCCCCAGAATTAGTTGAT+TGG | 0.442694 | 4_2:+60354618 | Msa0611980:CDS |
| GCGATAGAATCGGCTGGCAT+TGG | 0.444797 | 4_2:-60357988 | None:intergenic |
| TTTCCGTCCACAGTCTCCTC+TGG | 0.445026 | 4_2:-60360393 | None:intergenic |
| TCACATTGGCGTGCAGAGTT+CGG | 0.445495 | 4_2:+60358347 | Msa0611980:CDS |
| AAGCGTTCGAGACCAGCTAA+TGG | 0.448914 | 4_2:+60358459 | Msa0611980:CDS |
| TGACCTACTCAACCTCTTCA+AGG | 0.452976 | 4_2:+60360271 | Msa0611980:CDS |
| GACGGCGGCGCAGTTGGGAG+GGG | 0.453532 | 4_2:-60351954 | None:intergenic |
| AAAGTTATAACGGTCGCGTC+GGG | 0.455333 | 4_2:-60352154 | None:intergenic |
| CGTAAGACGGCGGCGCAGTT+GGG | 0.459054 | 4_2:-60351959 | None:intergenic |
| TACCCGAGAGAAACTGGTTC+GGG | 0.462506 | 4_2:+60351854 | None:intergenic |
| GAAGGTTATAGCTTGGCAAT+AGG | 0.464718 | 4_2:-60355408 | None:intergenic |
| GTTTGGTTTGTTTAGTAATG+AGG | 0.465212 | 4_2:+60352899 | Msa0611980:intron |
| AGGAAGAAAAGTAAAAGATC+AGG | 0.465275 | 4_2:+60358223 | Msa0611980:CDS |
| ACAACCAATCAACTAATTCT+GGG | 0.466223 | 4_2:-60354622 | None:intergenic |
| GGCCAAATGCACCTTATGGC+GGG | 0.470614 | 4_2:+60360753 | Msa0611980:CDS |
| GGTGATAAGTTCAAAATTGG+TGG | 0.478383 | 4_2:-60360871 | None:intergenic |
| TGATGATGGTGATGATCAAA+TGG | 0.479990 | 4_2:+60360137 | Msa0611980:CDS |
| GTGGTTGTTAATGGGCCAGC+TGG | 0.481470 | 4_2:+60358599 | Msa0611980:CDS |
| TTCATCTCAACTACATTGCT+AGG | 0.486326 | 4_2:-60358167 | None:intergenic |
| AACTTATCACCTGCTTAGAT+GGG | 0.493836 | 4_2:+60360883 | Msa0611980:three_prime_UTR |
| AGCGTTCGAGACCAGCTAAT+GGG | 0.494581 | 4_2:+60358460 | Msa0611980:CDS |
| AGCTCGCCTTGAAGAGATCA+AGG | 0.498098 | 4_2:+60355481 | Msa0611980:CDS |
| ATGATCGACTTGCTGCCCTT+CGG | 0.498169 | 4_2:-60355447 | None:intergenic |
| CCAGTGGATTCCCCGCCATA+AGG | 0.499092 | 4_2:-60360764 | None:intergenic |
| CCTTATGGCGGGGAATCCAC+TGG | 0.499825 | 4_2:+60360764 | Msa0611980:CDS |
| ACGTAAGACGGCGGCGCAGT+TGG | 0.500239 | 4_2:-60351960 | None:intergenic |
| TATGAATTATGGAGATAACT+AGG | 0.501868 | 4_2:-60351921 | None:intergenic |
| TTCGTTTATAGCGATAGAAT+CGG | 0.508160 | 4_2:-60357998 | None:intergenic |
| AGACGGCGGCGCAGTTGGGA+GGG | 0.508923 | 4_2:-60351955 | None:intergenic |
| AGCAAATGAACGTTCTGTAT+AGG | 0.509672 | 4_2:+60353501 | Msa0611980:CDS |
| CGTTAAGAATCGCAAGGGAC+AGG | 0.510804 | 4_2:+60360715 | Msa0611980:CDS |
| AATTGCAATAAAAGAACAAA+GGG | 0.514657 | 4_2:+60353216 | Msa0611980:CDS |
| AAGACGGCGGCGCAGTTGGG+AGG | 0.515511 | 4_2:-60351956 | None:intergenic |
| ATACCCGAGAGAAACTGGTT+CGG | 0.516975 | 4_2:+60351853 | None:intergenic |
| AATTTCTTCCTCTTCCTTTG+GGG | 0.517199 | 4_2:-60353197 | None:intergenic |
| AAAGCGCTATATCACTTCTC+AGG | 0.520939 | 4_2:+60360413 | Msa0611980:CDS |
| TTCAGCTTAGCATTAACAAA+CGG | 0.521189 | 4_2:-60358644 | None:intergenic |
| CCTCTTCATCTTGAGATACA+AGG | 0.527251 | 4_2:-60360164 | None:intergenic |
| TCCAAAATTTCACCTTGAAG+AGG | 0.527385 | 4_2:-60360283 | None:intergenic |
| TAATACAGAATGGCGAAGAA+AGG | 0.532238 | 4_2:+60352084 | Msa0611980:exon |
| AGACGCTATTCGTGAACGAC+GGG | 0.535065 | 4_2:+60360059 | Msa0611980:CDS |
| TGAATATGATGGCAAGGAGA+AGG | 0.537122 | 4_2:+60352574 | Msa0611980:CDS |
| AAGACATGAGAAGCGGGTGA+TGG | 0.538557 | 4_2:+60360083 | Msa0611980:CDS |
| TGAAGAGGACATTGAAAGTG+GGG | 0.545005 | 4_2:+60360179 | Msa0611980:CDS |
| CAGGGGAGTGCAACGTAAGA+CGG | 0.545771 | 4_2:-60351972 | None:intergenic |
| GTGAAGCTATACCCATTAGC+TGG | 0.546075 | 4_2:-60358471 | None:intergenic |
| TGACGAGGCCCCAAAGGAAG+AGG | 0.547359 | 4_2:+60353189 | Msa0611980:CDS |
| TATAAACGAAGAACAGCCTC+TGG | 0.547574 | 4_2:+60358011 | Msa0611980:CDS |
| GGTATTAAGAAAACTATCGT+TGG | 0.551126 | 4_2:+60352991 | Msa0611980:CDS |
| GAAGGTAGAAGGTTATAGCT+TGG | 0.551961 | 4_2:-60355415 | None:intergenic |
| CCTTGTATCTCAAGATGAAG+AGG | 0.552001 | 4_2:+60360164 | Msa0611980:CDS |
| TCACCTTGAAGAGGTTGAGT+AGG | 0.554310 | 4_2:-60360274 | None:intergenic |
| AGTTACACGCCCATCTAAGC+AGG | 0.558570 | 4_2:-60360892 | None:intergenic |
| TGCTAAGCTGAAGAAACTAA+AGG | 0.559593 | 4_2:+60358655 | Msa0611980:CDS |
| GATAGTTGCATTAATTCCAG+TGG | 0.559627 | 4_2:-60360780 | None:intergenic |
| TAGAACGATATTGTAACGTA+AGG | 0.560055 | 4_2:-60360843 | None:intergenic |
| GAATCAGCATTAATGTCAAG+TGG | 0.560264 | 4_2:-60352329 | None:intergenic |
| CTTCAGTGGAAAAGTTATAA+CGG | 0.561135 | 4_2:-60352164 | None:intergenic |
| CAAGATGAAGAAGACGATGA+AGG | 0.563625 | 4_2:+60352970 | Msa0611980:CDS |
| GATGAAGAGGACATTGAAAG+TGG | 0.563927 | 4_2:+60360177 | Msa0611980:CDS |
| AAGCGGGTGATGGATGGTGC+TGG | 0.566712 | 4_2:+60360093 | Msa0611980:CDS |
| TACCTTCTACTCAAGTCCGA+AGG | 0.569691 | 4_2:+60355431 | Msa0611980:CDS |
| CATTATCTTCGTCTTCCACA+AGG | 0.570008 | 4_2:-60353273 | None:intergenic |
| GAATATGATGGCAAGGAGAA+GGG | 0.570082 | 4_2:+60352575 | Msa0611980:CDS |
| TGAACTTCCAGTTGAACTTG+AGG | 0.572238 | 4_2:+60357906 | Msa0611980:CDS |
| ATTGAGGATGATAATGATGA+TGG | 0.574706 | 4_2:+60360123 | Msa0611980:CDS |
| ATTCGCAGTTCATAAGCAGA+GGG | 0.581409 | 4_2:+60352298 | Msa0611980:intron |
| CACAGTCTCCTCTGGCAACG+AGG | 0.583129 | 4_2:-60360385 | None:intergenic |
| GGATCTGAGTGCTTTGTCAA+AGG | 0.583517 | 4_2:+60353475 | Msa0611980:CDS |
| ATGAAGAGGACATTGAAAGT+GGG | 0.585323 | 4_2:+60360178 | Msa0611980:CDS |
| TTACTTGAGACAAGACCAGC+TGG | 0.585973 | 4_2:-60358614 | None:intergenic |
| TAATGTAACTTTCAATGTCG+AGG | 0.587478 | 4_2:+60353454 | Msa0611980:CDS |
| ACAGTCTCCTCTGGCAACGA+GGG | 0.590378 | 4_2:-60360384 | None:intergenic |
| AAGTGATGACGAGGCCCCAA+AGG | 0.591250 | 4_2:+60353183 | Msa0611980:CDS |
| TTTATAGCGATAGAATCGGC+TGG | 0.591664 | 4_2:-60357994 | None:intergenic |
| AATCATCATATGTTGCAAGC+TGG | 0.591742 | 4_2:-60358565 | None:intergenic |
| CTCGTCGTCCATGTCTTCAG+TGG | 0.594619 | 4_2:-60352178 | None:intergenic |
| ACGGGAAAGACATGAGAAGC+GGG | 0.595279 | 4_2:+60360077 | Msa0611980:CDS |
| AAATCAGATTCCTTAAAGGA+TGG | 0.597906 | 4_2:+60358191 | Msa0611980:CDS |
| TACAATTATCAGCACCATGT+CGG | 0.598273 | 4_2:-60353023 | None:intergenic |
| CTCGTTGCCAGAGGAGACTG+TGG | 0.598427 | 4_2:+60360386 | Msa0611980:CDS |
| GGATGATGAATATGATGGCA+AGG | 0.599227 | 4_2:+60352568 | Msa0611980:CDS |
| AGTACTATTCAAGATTTCGC+CGG | 0.601307 | 4_2:+60352052 | Msa0611980:five_prime_UTR |
| GCCAAATGCACCTTATGGCG+GGG | 0.602795 | 4_2:+60360754 | Msa0611980:CDS |
| AAATATTTGAAGTCGTTGCA+TGG | 0.603177 | 4_2:+60352928 | Msa0611980:CDS |
| GATTCGCAGTTCATAAGCAG+AGG | 0.607779 | 4_2:+60352297 | Msa0611980:intron |
| TACAGAATGGCGAAGAAAGG+AGG | 0.608179 | 4_2:+60352087 | Msa0611980:exon |
| ACCTTCTACTCAAGTCCGAA+GGG | 0.608313 | 4_2:+60355432 | Msa0611980:CDS |
| ACGAAAGTGAGAAGTAACGC+AGG | 0.610501 | 4_2:-60351991 | None:intergenic |
| CGAAAGTGAGAAGTAACGCA+GGG | 0.611777 | 4_2:-60351990 | None:intergenic |
| CATGAGAAGCGGGTGATGGA+TGG | 0.612446 | 4_2:+60360087 | Msa0611980:CDS |
| TCAGAATAGAGAGCAAATGC+CGG | 0.615092 | 4_2:-60352026 | None:intergenic |
| GACAGGTTCAGAGTATCAGA+AGG | 0.617166 | 4_2:+60360732 | Msa0611980:CDS |
| AAATTGCAATAAAAGAACAA+AGG | 0.617287 | 4_2:+60353215 | Msa0611980:CDS |
| TGATGAGGACGGCGACGAGG+AGG | 0.619817 | 4_2:+60352529 | Msa0611980:CDS |
| AGCTGTCCCCTCGTTGCCAG+AGG | 0.620068 | 4_2:+60360377 | Msa0611980:CDS |
| AAAAGTTATAACGGTCGCGT+CGG | 0.620460 | 4_2:-60352155 | None:intergenic |
| AGGCCAAATGCACCTTATGG+CGG | 0.622008 | 4_2:+60360752 | Msa0611980:CDS |
| AAAAGCCGTTAAGAATCGCA+AGG | 0.624113 | 4_2:+60360709 | Msa0611980:CDS |
| ACTAACTCGTAGTCGGAACA+AGG | 0.626136 | 4_2:+60360541 | Msa0611980:CDS |
| TTGCCAGAGGAGACTGTGGA+CGG | 0.626248 | 4_2:+60360390 | Msa0611980:CDS |
| GGGGAAATAGTTATGGAAGG+AGG | 0.627308 | 4_2:+60355347 | Msa0611980:CDS |
| TAACTAGGTTGCTGTGTGCG+AGG | 0.627819 | 4_2:-60351906 | None:intergenic |
| ACAGAGGACTAACTCGTAGT+CGG | 0.630954 | 4_2:+60360534 | Msa0611980:CDS |
| GACGAGGATGATGAATATGA+TGG | 0.633701 | 4_2:+60352563 | Msa0611980:CDS |
| AGAATGGCGAAGAAAGGAGG+AGG | 0.635908 | 4_2:+60352090 | Msa0611980:exon |
| GACGGGAAAGACATGAGAAG+CGG | 0.637750 | 4_2:+60360076 | Msa0611980:CDS |
| TCTGAGTGCTTTGTCAAAGG+AGG | 0.637865 | 4_2:+60353478 | Msa0611980:CDS |
| GTTGGAAGAAAGCACCGACA+TGG | 0.649199 | 4_2:+60353009 | Msa0611980:CDS |
| CAACCAATCAACTAATTCTG+GGG | 0.649259 | 4_2:-60354621 | None:intergenic |
| AACTGATGAGGACGGCGACG+AGG | 0.652141 | 4_2:+60352526 | Msa0611980:CDS |
| AAAAGTTAGAGCTTCCCTTG+AGG | 0.652712 | 4_2:+60358377 | Msa0611980:CDS |
| CAGTCTCCTCTGGCAACGAG+GGG | 0.655627 | 4_2:-60360383 | None:intergenic |
| CTGTAGATGTCGAAGAACAG+AGG | 0.656488 | 4_2:+60360518 | Msa0611980:intron |
| GAAGAGGACATTGAAAGTGG+GGG | 0.657844 | 4_2:+60360180 | Msa0611980:CDS |
| GAGACGCTATTCGTGAACGA+CGG | 0.665395 | 4_2:+60360058 | Msa0611980:CDS |
| GAAAGCAAAACAATATACAG+AGG | 0.665792 | 4_2:+60353240 | Msa0611980:CDS |
| GAATCCTAGAAAGAACTACA+AGG | 0.667921 | 4_2:+60360571 | Msa0611980:CDS |
| TTGCATGGTGGAGATGAAGA+CGG | 0.669329 | 4_2:+60352943 | Msa0611980:CDS |
| TGAATCACCAGAAGAAGCAG+TGG | 0.672149 | 4_2:+60358041 | Msa0611980:CDS |
| GAATAGAGAGCAAATGCCGG+AGG | 0.673248 | 4_2:-60352023 | None:intergenic |
| TGATAATGATGAAACTGATG+AGG | 0.675042 | 4_2:+60352514 | Msa0611980:CDS |
| AAAGCCGTTAAGAATCGCAA+GGG | 0.675175 | 4_2:+60360710 | Msa0611980:CDS |
| GGTGATTCAGCAGAGACCAG+AGG | 0.679046 | 4_2:-60358027 | None:intergenic |
| ACATGGCAGAAGGATCACAT+TGG | 0.681753 | 4_2:+60358333 | Msa0611980:intron |
| GGAGGAAGACGATGATGACG+AGG | 0.686645 | 4_2:+60352547 | Msa0611980:CDS |
| TGGTGCTGGAGTTACAATTG+AGG | 0.686836 | 4_2:+60360107 | Msa0611980:CDS |
| TATTTGAAGTCGTTGCATGG+TGG | 0.689833 | 4_2:+60352931 | Msa0611980:CDS |
| GCTACAATCAAGTGATGACG+AGG | 0.691085 | 4_2:+60353174 | Msa0611980:intron |
| AATGATGAAACTGATGAGGA+CGG | 0.693404 | 4_2:+60352518 | Msa0611980:CDS |
| GGGAGTGCAACGTAAGACGG+CGG | 0.709406 | 4_2:-60351969 | None:intergenic |
| GAAAGTGAGAAGTAACGCAG+GGG | 0.721608 | 4_2:-60351989 | None:intergenic |
| TTGGTTGTCAGAATTAAACG+AGG | 0.733976 | 4_2:+60354637 | Msa0611980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTAAATTAAATCATAAAAT+AGG | - | chr4_2:60355191-60355210 | None:intergenic | 10.0% |
| !! | AAATAAGACATAAATATATA+AGG | - | chr4_2:60358090-60358109 | None:intergenic | 10.0% |
| !!! | ATAATCAAATTTTAATCATC+AGG | - | chr4_2:60352230-60352249 | None:intergenic | 15.0% |
| !! | AGAAAAACAATAAAAAGTAA+GGG | - | chr4_2:60353128-60353147 | None:intergenic | 15.0% |
| !! | AAGAAAAACAATAAAAAGTA+AGG | - | chr4_2:60353129-60353148 | None:intergenic | 15.0% |
| !!! | TAATGAGAAATTAACTTTTA+AGG | + | chr4_2:60353291-60353310 | Msa0611980:CDS | 15.0% |
| !!! | GTAATCTTTTATATTTTTAC+AGG | + | chr4_2:60353421-60353440 | Msa0611980:intron | 15.0% |
| !!! | TTTTCTTTTTCAATCAATTT+TGG | - | chr4_2:60353953-60353972 | None:intergenic | 15.0% |
| !! | AAATAAATTGTAACACAATA+TGG | - | chr4_2:60355304-60355323 | None:intergenic | 15.0% |
| !!! | TTTTTTGTTTTTTAAGTAAC+CGG | - | chr4_2:60355942-60355961 | None:intergenic | 15.0% |
| !! | AAAACGACATATTAATAAAA+TGG | - | chr4_2:60356113-60356132 | None:intergenic | 15.0% |
| !!! | ATTTTATTAATATGTCGTTT+TGG | + | chr4_2:60356112-60356131 | Msa0611980:intron | 15.0% |
| !! | GTTTAAAAAAAAAGTAATTG+TGG | + | chr4_2:60356332-60356351 | Msa0611980:intron | 15.0% |
| !! | ATAACATATTAAGAAACTAT+GGG | + | chr4_2:60356718-60356737 | Msa0611980:intron | 15.0% |
| !!! | TTTTTTTTATATCATAGCAT+TGG | + | chr4_2:60356757-60356776 | Msa0611980:intron | 15.0% |
| !! | AATTCATTAATGAAATAAAC+TGG | + | chr4_2:60357518-60357537 | Msa0611980:intron | 15.0% |
| !! | TAAATTATATACAGTTAACT+AGG | - | chr4_2:60357774-60357793 | None:intergenic | 15.0% |
| !!! | ATTTTATTTATCGTTGTAAA+AGG | + | chr4_2:60358285-60358304 | Msa0611980:intron | 15.0% |
| !! | TAATGGTGTAAATTAAAATT+TGG | - | chr4_2:60359569-60359588 | None:intergenic | 15.0% |
| !!! | TAACTTGTATAATTATTGAT+TGG | + | chr4_2:60360910-60360929 | Msa0611980:three_prime_UTR | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr4_2:60361051-60361070 | None:intergenic | 15.0% |
| !! | ATAACCTTATCATTGAAAAT+AGG | - | chr4_2:60352383-60352402 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTCTTCTGTTTAC+AGG | + | chr4_2:60352487-60352506 | Msa0611980:intron | 20.0% |
| !!! | TTAATTTCCTTTGTTACTTT+TGG | + | chr4_2:60352824-60352843 | Msa0611980:intron | 20.0% |
| !! | AAAATATCCAAAAGTAACAA+AGG | - | chr4_2:60352834-60352853 | None:intergenic | 20.0% |
| !! | TTCTGATAAATATACATGTT+TGG | + | chr4_2:60352882-60352901 | Msa0611980:intron | 20.0% |
| !! | TTTGAGCATAATATTTGTAA+AGG | + | chr4_2:60353061-60353080 | Msa0611980:intron | 20.0% |
| !!! | AATGTTTTAGATATTACACA+CGG | - | chr4_2:60353093-60353112 | None:intergenic | 20.0% |
| !! | AAATTGCAATAAAAGAACAA+AGG | + | chr4_2:60353215-60353234 | Msa0611980:CDS | 20.0% |
| !! | AATTGCAATAAAAGAACAAA+GGG | + | chr4_2:60353216-60353235 | Msa0611980:CDS | 20.0% |
| !! | ACACAATCAATATATATCAA+TGG | - | chr4_2:60353550-60353569 | None:intergenic | 20.0% |
| !!! | TCATTTTTTCAGTTTCAATT+TGG | - | chr4_2:60353699-60353718 | None:intergenic | 20.0% |
| !!! | TCTAAAATTCAAAGTTGTTT+AGG | - | chr4_2:60353732-60353751 | None:intergenic | 20.0% |
| !!! | TAAACAACTTTGAATTTTAG+AGG | + | chr4_2:60353731-60353750 | Msa0611980:intron | 20.0% |
| !! | TGTATATACTCAAGATATTA+AGG | + | chr4_2:60353871-60353890 | Msa0611980:intron | 20.0% |
| !!! | GTCATTTCTAATCATTTTTT+CGG | - | chr4_2:60353927-60353946 | None:intergenic | 20.0% |
| !! | AAAAAGAAAAGAATGTAAGA+AGG | + | chr4_2:60353963-60353982 | Msa0611980:intron | 20.0% |
| !!! | ATAATTTTCATTTTGTGAAG+CGG | + | chr4_2:60354169-60354188 | Msa0611980:intron | 20.0% |
| !!! | ATGATTTTTTTTTGTTTTGC+TGG | + | chr4_2:60354214-60354233 | Msa0611980:intron | 20.0% |
| !! | AATTCAGCATAGAAAAATAT+GGG | - | chr4_2:60354515-60354534 | None:intergenic | 20.0% |
| !! | AAAAGAAAACTATTGTCTAT+AGG | - | chr4_2:60355236-60355255 | None:intergenic | 20.0% |
| !! | TTATTTATGTTGTTCTACTT+GGG | + | chr4_2:60355265-60355284 | Msa0611980:intron | 20.0% |
| !!! | TTTTTGTTTTTTAAGTAACC+GGG | - | chr4_2:60355941-60355960 | None:intergenic | 20.0% |
| !!! | TTCTTTTTTCTTAGTTGTTT+TGG | + | chr4_2:60356135-60356154 | Msa0611980:intron | 20.0% |
| !!! | TCTTTTTTCTTAGTTGTTTT+GGG | + | chr4_2:60356136-60356155 | Msa0611980:intron | 20.0% |
| !!! | GTTTATTGATTAAGTAATTG+TGG | + | chr4_2:60356305-60356324 | Msa0611980:intron | 20.0% |
| !! | TATACATGAATTTGTAAGAT+TGG | + | chr4_2:60356495-60356514 | Msa0611980:intron | 20.0% |
| !! | CATAACATATTAAGAAACTA+TGG | + | chr4_2:60356717-60356736 | Msa0611980:intron | 20.0% |
| !!! | TTTTTAACTTTTTTGTACTG+TGG | + | chr4_2:60357407-60357426 | Msa0611980:intron | 20.0% |
| !!! | TAATTTTACAGTATTATTGC+CGG | + | chr4_2:60357573-60357592 | Msa0611980:intron | 20.0% |
| !! | AATGGTTCAACTTAATTTAT+TGG | + | chr4_2:60357620-60357639 | Msa0611980:intron | 20.0% |
| !!! | TTTGATATTTCTATGCAATT+AGG | - | chr4_2:60357808-60357827 | None:intergenic | 20.0% |
| !! | GGTGTATTTAGAAAAATTTA+AGG | + | chr4_2:60359436-60359455 | Msa0611980:intron | 20.0% |
| !!! | ATATCTTATTTCTAAGAACT+TGG | - | chr4_2:60359535-60359554 | None:intergenic | 20.0% |
| !! | AATAAGAATTATGTTGTGAA+GGG | - | chr4_2:60359630-60359649 | None:intergenic | 20.0% |
| !! | AAATAAGAATTATGTTGTGA+AGG | - | chr4_2:60359631-60359650 | None:intergenic | 20.0% |
| !! | AAACTAAAATCTAGATAAGT+TGG | + | chr4_2:60359687-60359706 | Msa0611980:intron | 20.0% |
| !! | GTCAAATTTAAATGTTCAAT+TGG | + | chr4_2:60360629-60360648 | Msa0611980:intron | 20.0% |
| ! | TATGAATTATGGAGATAACT+AGG | - | chr4_2:60351924-60351943 | None:intergenic | 25.0% |
| ! | GTATTAGGGTTTATGAATTA+TGG | - | chr4_2:60351935-60351954 | None:intergenic | 25.0% |
| !!! | TTCTGTATTAGTTTTTTCAC+CGG | - | chr4_2:60352074-60352093 | None:intergenic | 25.0% |
| ! | GTGAAAAAACTAATACAGAA+TGG | + | chr4_2:60352074-60352093 | Msa0611980:exon | 25.0% |
| !!! | ATTTTAATCATCAGGTGAAA+AGG | - | chr4_2:60352222-60352241 | None:intergenic | 25.0% |
| !! | AATGCCTATTTTCAATGATA+AGG | + | chr4_2:60352376-60352395 | Msa0611980:CDS | 25.0% |
| !!! | AGTTTTACTTTCAACTTGTT+TGG | + | chr4_2:60352453-60352472 | Msa0611980:intron | 25.0% |
| !! | TTTTATATGCATGTATAAGC+TGG | + | chr4_2:60352780-60352799 | Msa0611980:intron | 25.0% |
| ! | TTTATATGCATGTATAAGCT+GGG | + | chr4_2:60352781-60352800 | Msa0611980:intron | 25.0% |
| ! | TGAAGTCGAATTTATTCAAA+AGG | + | chr4_2:60352854-60352873 | Msa0611980:intron | 25.0% |
| !! | TGCTGATAATTGTAATTTTG+AGG | + | chr4_2:60353032-60353051 | Msa0611980:CDS | 25.0% |
| !!! | ATAATTGTAATTTTGAGGTG+AGG | + | chr4_2:60353037-60353056 | Msa0611980:intron | 25.0% |
| !! | CTTGAATAATTGTAACTTGT+TGG | + | chr4_2:60353146-60353165 | Msa0611980:intron | 25.0% |
| !!! | TATATTTTTACAGGATGCAT+CGG | + | chr4_2:60353430-60353449 | Msa0611980:intron | 25.0% |
| ! | AATCAATATATATCAATGGC+AGG | - | chr4_2:60353546-60353565 | None:intergenic | 25.0% |
| !!! | AATCAGTTTTTTTCATCTGT+AGG | - | chr4_2:60353651-60353670 | None:intergenic | 25.0% |
| ! | TTTCAAGAGTAAGCATATAT+TGG | + | chr4_2:60353669-60353688 | Msa0611980:intron | 25.0% |
| ! | CAAGATATTAAGGACATAAA+TGG | + | chr4_2:60353881-60353900 | Msa0611980:intron | 25.0% |
| !!! | CTAATCATTTTTTCGGTTTT+GGG | - | chr4_2:60353920-60353939 | None:intergenic | 25.0% |
| !!! | TCTAATCATTTTTTCGGTTT+TGG | - | chr4_2:60353921-60353940 | None:intergenic | 25.0% |
| !!! | CTTTTTCAATCAATTTTGGT+AGG | - | chr4_2:60353949-60353968 | None:intergenic | 25.0% |
| ! | CAAAAAAAAATCATGCTGAA+TGG | - | chr4_2:60354208-60354227 | None:intergenic | 25.0% |
| ! | CAATTCAGCATAGAAAAATA+TGG | - | chr4_2:60354516-60354535 | None:intergenic | 25.0% |
| !!! | AATTAACCCATTTTTAAGCA+AGG | + | chr4_2:60354682-60354701 | Msa0611980:CDS | 25.0% |
| ! | GAAAAACCTTGCTTAAAAAT+GGG | - | chr4_2:60354691-60354710 | None:intergenic | 25.0% |
| ! | AGAAAAACCTTGCTTAAAAA+TGG | - | chr4_2:60354692-60354711 | None:intergenic | 25.0% |
| !! | CGTGGTTTTCATAATATTTT+TGG | - | chr4_2:60354860-60354879 | None:intergenic | 25.0% |
| ! | CTTATTTATGTTGTTCTACT+TGG | + | chr4_2:60355264-60355283 | Msa0611980:intron | 25.0% |
| ! | ATTTATTTCATCTCTTGTGA+AGG | + | chr4_2:60355316-60355335 | Msa0611980:intron | 25.0% |
| !!! | CAAAGCAATTTGTTAGAATT+CGG | - | chr4_2:60355644-60355663 | None:intergenic | 25.0% |
| ! | TTGTTCTGTAATACATTGTT+TGG | + | chr4_2:60355661-60355680 | Msa0611980:intron | 25.0% |
| ! | GATGAATGACTTTATGTAAT+GGG | - | chr4_2:60356837-60356856 | None:intergenic | 25.0% |
| ! | CCAAAGATATTCAAATAAGA+TGG | - | chr4_2:60357438-60357457 | None:intergenic | 25.0% |
| !! | CCATCTTATTTGAATATCTT+TGG | + | chr4_2:60357435-60357454 | Msa0611980:intron | 25.0% |
| !! | ATCTTTGGTTTCTTGTATTA+TGG | + | chr4_2:60357450-60357469 | Msa0611980:intron | 25.0% |
| !!! | TCCATTTTATTTGAAGTCTT+CGG | + | chr4_2:60357477-60357496 | Msa0611980:intron | 25.0% |
| !! | CCATTGATTATTGTAAATAC+AGG | - | chr4_2:60357605-60357624 | None:intergenic | 25.0% |
| ! | CCTGTATTTACAATAATCAA+TGG | + | chr4_2:60357602-60357621 | Msa0611980:intron | 25.0% |
| !!! | TAACTAGGCAATTTTAACAT+TGG | - | chr4_2:60357759-60357778 | None:intergenic | 25.0% |
| ! | TGCATAAAAATTAACTGTTG+AGG | - | chr4_2:60358138-60358157 | None:intergenic | 25.0% |
| ! | GAAAAAATCAGATTCCTTAA+AGG | + | chr4_2:60358187-60358206 | Msa0611980:CDS | 25.0% |
| !! | TTGTTTCAATTTTTCCTCAA+GGG | - | chr4_2:60358394-60358413 | None:intergenic | 25.0% |
| !! | TTTGTTTCAATTTTTCCTCA+AGG | - | chr4_2:60358395-60358414 | None:intergenic | 25.0% |
| ! | GAGGAAAAATTGAAACAAAA+TGG | + | chr4_2:60358396-60358415 | Msa0611980:CDS | 25.0% |
| !! | ACTCATTGAGATTTTATTGA+TGG | + | chr4_2:60358679-60358698 | Msa0611980:intron | 25.0% |
| !! | TTTTTGAACTCGAGATTAAA+AGG | - | chr4_2:60358772-60358791 | None:intergenic | 25.0% |
| !! | TAGAGTTGTCTTTTATATTG+AGG | - | chr4_2:60358924-60358943 | None:intergenic | 25.0% |
| ! | AAAAAATGTCTGACCAAAAT+TGG | - | chr4_2:60358957-60358976 | None:intergenic | 25.0% |
| ! | CACATATATACATCCAATAT+GGG | + | chr4_2:60359152-60359171 | Msa0611980:intron | 25.0% |
| ! | ACACCATTATAACTACAATT+TGG | + | chr4_2:60359580-60359599 | Msa0611980:intron | 25.0% |
| ! | CAACCAAATTGTAGTTATAA+TGG | - | chr4_2:60359586-60359605 | None:intergenic | 25.0% |
| ! | AGAAGCGAATTATCTTAAAA+TGG | + | chr4_2:60359734-60359753 | Msa0611980:intron | 25.0% |
| ! | TAGTTTCATATTGAAGAAGA+TGG | - | chr4_2:60360330-60360349 | None:intergenic | 25.0% |
| ! | CAAATTTGTAAGTGTTAACT+TGG | + | chr4_2:60360484-60360503 | Msa0611980:intron | 25.0% |
| ! | AACATCTTTGGCATATTAAA+TGG | + | chr4_2:60360939-60360958 | Msa0611980:three_prime_UTR | 25.0% |
| CTTCAGTGGAAAAGTTATAA+CGG | - | chr4_2:60352167-60352186 | None:intergenic | 30.0% | |
| ! | TGATAATGATGAAACTGATG+AGG | + | chr4_2:60352514-60352533 | Msa0611980:CDS | 30.0% |
| !! | GTTTGGTTTGTTTAGTAATG+AGG | + | chr4_2:60352899-60352918 | Msa0611980:intron | 30.0% |
| ! | AAATATTTGAAGTCGTTGCA+TGG | + | chr4_2:60352928-60352947 | Msa0611980:CDS | 30.0% |
| GGTATTAAGAAAACTATCGT+TGG | + | chr4_2:60352991-60353010 | Msa0611980:CDS | 30.0% | |
| GAAAGCAAAACAATATACAG+AGG | + | chr4_2:60353240-60353259 | Msa0611980:CDS | 30.0% | |
| !!! | CACTTTTTCATCCATTAATG+TGG | - | chr4_2:60353367-60353386 | None:intergenic | 30.0% |
| !! | AATGGATGAAAAAGTGCTTA+CGG | + | chr4_2:60353371-60353390 | Msa0611980:intron | 30.0% |
| TAATGTAACTTTCAATGTCG+AGG | + | chr4_2:60353454-60353473 | Msa0611980:CDS | 30.0% | |
| ! | TTATCTGGTTTAGTAGCAAA+GGG | - | chr4_2:60353592-60353611 | None:intergenic | 30.0% |
| ! | ATTATCTGGTTTAGTAGCAA+AGG | - | chr4_2:60353593-60353612 | None:intergenic | 30.0% |
| ATTCACAGCTATGAATGAAA+TGG | - | chr4_2:60353626-60353645 | None:intergenic | 30.0% | |
| ! | ATTACAAAACTGATTAGCCA+AGG | + | chr4_2:60353789-60353808 | Msa0611980:intron | 30.0% |
| ! | TTACAAAACTGATTAGCCAA+GGG | + | chr4_2:60353790-60353809 | Msa0611980:intron | 30.0% |
| TATGTTTCTCTATTCACCAA+TGG | - | chr4_2:60353843-60353862 | None:intergenic | 30.0% | |
| TTGTCCTACTTTAGATGAAA+AGG | + | chr4_2:60353990-60354009 | Msa0611980:intron | 30.0% | |
| TCATTGTTTACCCTCAAATT+GGG | - | chr4_2:60354016-60354035 | None:intergenic | 30.0% | |
| TTCATTGTTTACCCTCAAAT+TGG | - | chr4_2:60354017-60354036 | None:intergenic | 30.0% | |
| TGAGGGTAAACAATGAAATA+AGG | + | chr4_2:60354020-60354039 | Msa0611980:intron | 30.0% | |
| GAGGGTAAACAATGAAATAA+GGG | + | chr4_2:60354021-60354040 | Msa0611980:intron | 30.0% | |
| ACTAATTATCCTCAAAGCAA+TGG | - | chr4_2:60354139-60354158 | None:intergenic | 30.0% | |
| ! | AATATGGGTTGAAAAGAAGA+GGG | - | chr4_2:60354500-60354519 | None:intergenic | 30.0% |
| ! | AAATATGGGTTGAAAAGAAG+AGG | - | chr4_2:60354501-60354520 | None:intergenic | 30.0% |
| ACAACCAATCAACTAATTCT+GGG | - | chr4_2:60354625-60354644 | None:intergenic | 30.0% | |
| GAACTACTCATGGAAAAAAT+GGG | - | chr4_2:60354743-60354762 | None:intergenic | 30.0% | |
| CATTAAACTTCAATTACTGC+AGG | - | chr4_2:60354824-60354843 | None:intergenic | 30.0% | |
| ! | GACTGATTCTAATATTCTAG+AGG | - | chr4_2:60354958-60354977 | None:intergenic | 30.0% |
| CATCAAAAATATATCTAGCG+AGG | + | chr4_2:60354996-60355015 | Msa0611980:intron | 30.0% | |
| AAAGAGACGCAAAAAATGAA+AGG | - | chr4_2:60355051-60355070 | None:intergenic | 30.0% | |
| TTTGCGTCTCTTTAAACTTT+AGG | + | chr4_2:60355058-60355077 | Msa0611980:intron | 30.0% | |
| TAACACTATAATTCCTCACA+GGG | - | chr4_2:60355122-60355141 | None:intergenic | 30.0% | |
| ATAACACTATAATTCCTCAC+AGG | - | chr4_2:60355123-60355142 | None:intergenic | 30.0% | |
| ACAGATACACTTAAAAACAG+TGG | - | chr4_2:60355156-60355175 | None:intergenic | 30.0% | |
| ATCTCTTGTGAAGGTTAAAA+AGG | + | chr4_2:60355325-60355344 | Msa0611980:intron | 30.0% | |
| TCTCTTGTGAAGGTTAAAAA+GGG | + | chr4_2:60355326-60355345 | Msa0611980:intron | 30.0% | |
| TAAAAAGGGGGAAATAGTTA+TGG | + | chr4_2:60355340-60355359 | Msa0611980:CDS | 30.0% | |
| TTAATTCCTTGATCTCTTCA+AGG | - | chr4_2:60355490-60355509 | None:intergenic | 30.0% | |
| GATCAAGGAATTAATGAATC+AGG | + | chr4_2:60355496-60355515 | Msa0611980:CDS | 30.0% | |
| ! | TGAACATTGCTGTTAAATAG+CGG | + | chr4_2:60355596-60355615 | Msa0611980:intron | 30.0% |
| ATGAGATTAGTGTGTGTATT+GGG | - | chr4_2:60356051-60356070 | None:intergenic | 30.0% | |
| AATGAGATTAGTGTGTGTAT+TGG | - | chr4_2:60356052-60356071 | None:intergenic | 30.0% | |
| CATGAATTTGTAAGATTGGT+AGG | + | chr4_2:60356499-60356518 | Msa0611980:intron | 30.0% | |
| ! | AATATTTTCTAACAGTGACC+AGG | - | chr4_2:60356697-60356716 | None:intergenic | 30.0% |
| ACATATTAAGAAACTATGGG+AGG | + | chr4_2:60356721-60356740 | Msa0611980:intron | 30.0% | |
| ! | TGACTTTATGTAATGGGATT+GGG | - | chr4_2:60356831-60356850 | None:intergenic | 30.0% |
| ! | ATGACTTTATGTAATGGGAT+TGG | - | chr4_2:60356832-60356851 | None:intergenic | 30.0% |
| GGATGAATGACTTTATGTAA+TGG | - | chr4_2:60356838-60356857 | None:intergenic | 30.0% | |
| ACACTGTCAAAAAATGTAGA+CGG | - | chr4_2:60356911-60356930 | None:intergenic | 30.0% | |
| TACTGAAATCACTGTAAATC+GGG | - | chr4_2:60357044-60357063 | None:intergenic | 30.0% | |
| GTACTGAAATCACTGTAAAT+CGG | - | chr4_2:60357045-60357064 | None:intergenic | 30.0% | |
| !! | GTACTTCATGTTCAAGTTTT+TGG | + | chr4_2:60357061-60357080 | Msa0611980:intron | 30.0% |
| !!! | TTTTTGGTTGCTTTTCTTTC+TGG | + | chr4_2:60357077-60357096 | Msa0611980:intron | 30.0% |
| ! | TGATGATGACGATATTAAAC+TGG | - | chr4_2:60357167-60357186 | None:intergenic | 30.0% |
| !!! | AGGTCCTGATTTTAAAACAA+GGG | + | chr4_2:60357240-60357259 | Msa0611980:intron | 30.0% |
| !!! | ATAGCCCTTGTTTTAAAATC+AGG | - | chr4_2:60357247-60357266 | None:intergenic | 30.0% |
| ACACAATCCAATATAAGCAT+AGG | - | chr4_2:60357651-60357670 | None:intergenic | 30.0% | |
| ATATTGCATACATCCTACAT+TGG | + | chr4_2:60357674-60357693 | Msa0611980:intron | 30.0% | |
| ! | TATCAAATCTGAGATGTACT+CGG | + | chr4_2:60357821-60357840 | Msa0611980:intron | 30.0% |
| TTCGTTTATAGCGATAGAAT+CGG | - | chr4_2:60358001-60358020 | None:intergenic | 30.0% | |
| AAATCAGATTCCTTAAAGGA+TGG | + | chr4_2:60358191-60358210 | Msa0611980:CDS | 30.0% | |
| !!! | TTTTTTTGCACCATCCTTTA+AGG | - | chr4_2:60358204-60358223 | None:intergenic | 30.0% |
| TTAAAGGATGGTGCAAAAAA+AGG | + | chr4_2:60358203-60358222 | Msa0611980:CDS | 30.0% | |
| AGGAAGAAAAGTAAAAGATC+AGG | + | chr4_2:60358223-60358242 | Msa0611980:CDS | 30.0% | |
| !! | TTTTGAGAATTACTAGGCTT+TGG | - | chr4_2:60358441-60358460 | None:intergenic | 30.0% |
| TTCAGCTTAGCATTAACAAA+CGG | - | chr4_2:60358647-60358666 | None:intergenic | 30.0% | |
| TGTAAGTATCTTACAAATGC+AGG | - | chr4_2:60358741-60358760 | None:intergenic | 30.0% | |
| TCGAGTTCAAAAAATGTCAT+TGG | + | chr4_2:60358779-60358798 | Msa0611980:intron | 30.0% | |
| CGAGTTCAAAAAATGTCATT+GGG | + | chr4_2:60358780-60358799 | Msa0611980:intron | 30.0% | |
| TTCAAAAAATGTCATTGGGA+CGG | + | chr4_2:60358784-60358803 | Msa0611980:intron | 30.0% | |
| ! | CTAGAAGTAACTACCAATTT+TGG | + | chr4_2:60358941-60358960 | Msa0611980:intron | 30.0% |
| ACAACACTGTTAAATGAGTT+TGG | + | chr4_2:60358997-60359016 | Msa0611980:intron | 30.0% | |
| AAAAGATAGTTCATGAGTTG+AGG | + | chr4_2:60359031-60359050 | Msa0611980:intron | 30.0% | |
| ! | AAAGATAGTTCATGAGTTGA+GGG | + | chr4_2:60359032-60359051 | Msa0611980:intron | 30.0% |
| !! | TATGGGTATTGAAGTTGTAT+TGG | - | chr4_2:60359118-60359137 | None:intergenic | 30.0% |
| ATTGGATGTATATATGTGGT+TGG | - | chr4_2:60359150-60359169 | None:intergenic | 30.0% | |
| CCATATTGGATGTATATATG+TGG | - | chr4_2:60359154-60359173 | None:intergenic | 30.0% | |
| CCACATATATACATCCAATA+TGG | + | chr4_2:60359151-60359170 | Msa0611980:intron | 30.0% | |
| ACTCTTCATAAACTCATTTC+AGG | - | chr4_2:60359462-60359481 | None:intergenic | 30.0% | |
| TGAAATGAGTTTATGAAGAG+TGG | + | chr4_2:60359461-60359480 | Msa0611980:intron | 30.0% | |
| GGGCAAATTAATACAGAAAA+AGG | - | chr4_2:60359610-60359629 | None:intergenic | 30.0% | |
| TATGGATAATAGCGAAAAGA+AGG | - | chr4_2:60359827-60359846 | None:intergenic | 30.0% | |
| ACTAAAGTTAGCAATAGTCA+GGG | - | chr4_2:60359888-60359907 | None:intergenic | 30.0% | |
| AACTAAAGTTAGCAATAGTC+AGG | - | chr4_2:60359889-60359908 | None:intergenic | 30.0% | |
| ! | ATTGAGGATGATAATGATGA+TGG | + | chr4_2:60360123-60360142 | Msa0611980:CDS | 30.0% |
| !!! | AAAGTTTGTTTTGCTTTTGC+AGG | + | chr4_2:60360349-60360368 | Msa0611980:intron | 30.0% |
| TGACAAACAGTAAACAAGAA+AGG | - | chr4_2:60360657-60360676 | None:intergenic | 30.0% | |
| ! | TTTACTGTTTGTCATGCTTT+TGG | + | chr4_2:60360663-60360682 | Msa0611980:intron | 30.0% |
| TAGAACGATATTGTAACGTA+AGG | - | chr4_2:60360846-60360865 | None:intergenic | 30.0% | |
| GATTGGAAACTTAACATCTT+TGG | + | chr4_2:60360927-60360946 | Msa0611980:three_prime_UTR | 30.0% | |
| AGTACTATTCAAGATTTCGC+CGG | + | chr4_2:60352052-60352071 | Msa0611980:five_prime_UTR | 35.0% | |
| TAATACAGAATGGCGAAGAA+AGG | + | chr4_2:60352084-60352103 | Msa0611980:exon | 35.0% | |
| ! | TAACTTTTCCACTGAAGACA+TGG | + | chr4_2:60352170-60352189 | Msa0611980:CDS | 35.0% |
| GAATCAGCATTAATGTCAAG+TGG | - | chr4_2:60352332-60352351 | None:intergenic | 35.0% | |
| AATGATGAAACTGATGAGGA+CGG | + | chr4_2:60352518-60352537 | Msa0611980:CDS | 35.0% | |
| ATACAAAAAGACCCAAGCAT+TGG | + | chr4_2:60352714-60352733 | Msa0611980:intron | 35.0% | |
| TACAATTATCAGCACCATGT+CGG | - | chr4_2:60353026-60353045 | None:intergenic | 35.0% | |
| AATTTCTTCCTCTTCCTTTG+GGG | - | chr4_2:60353200-60353219 | None:intergenic | 35.0% | |
| CAATTTCTTCCTCTTCCTTT+GGG | - | chr4_2:60353201-60353220 | None:intergenic | 35.0% | |
| AATGTTATGTTGCCTAAGCA+TGG | + | chr4_2:60353334-60353353 | Msa0611980:intron | 35.0% | |
| !! | ATGGATGAAAAAGTGCTTAC+GGG | + | chr4_2:60353372-60353391 | Msa0611980:intron | 35.0% |
| AGCAAATGAACGTTCTGTAT+AGG | + | chr4_2:60353501-60353520 | Msa0611980:CDS | 35.0% | |
| TATATATCAATGGCAGGATG+AGG | - | chr4_2:60353540-60353559 | None:intergenic | 35.0% | |
| ATGGATGCAATGTCATTATC+TGG | - | chr4_2:60353607-60353626 | None:intergenic | 35.0% | |
| !! | TTGAATTTTAGAGGAGCGAA+TGG | + | chr4_2:60353740-60353759 | Msa0611980:intron | 35.0% |
| !! | AGATTACCTTCTGAAACCAT+TGG | + | chr4_2:60353824-60353843 | Msa0611980:intron | 35.0% |
| TATTCACCAATGGTTTCAGA+AGG | - | chr4_2:60353833-60353852 | None:intergenic | 35.0% | |
| CAATAGCTGAGATTTCTACT+GGG | - | chr4_2:60354059-60354078 | None:intergenic | 35.0% | |
| CTGCACATGTAAAATCATCA+AGG | - | chr4_2:60354082-60354101 | None:intergenic | 35.0% | |
| TGGCATATCAGACATCTAAA+AGG | - | chr4_2:60354248-60354267 | None:intergenic | 35.0% | |
| GTGTTGAATCCTGACAAAAT+TGG | + | chr4_2:60354434-60354453 | Msa0611980:intron | 35.0% | |
| AATCCTGACAAAATTGGATC+AGG | + | chr4_2:60354440-60354459 | Msa0611980:intron | 35.0% | |
| AAGGCCATAACAGCAATAAA+GGG | - | chr4_2:60354468-60354487 | None:intergenic | 35.0% | |
| CAACCAATCAACTAATTCTG+GGG | - | chr4_2:60354624-60354643 | None:intergenic | 35.0% | |
| GACAACCAATCAACTAATTC+TGG | - | chr4_2:60354626-60354645 | None:intergenic | 35.0% | |
| TTGGTTGTCAGAATTAAACG+AGG | + | chr4_2:60354637-60354656 | Msa0611980:CDS | 35.0% | |
| GGAACTACTCATGGAAAAAA+TGG | - | chr4_2:60354744-60354763 | None:intergenic | 35.0% | |
| !!! | CATAGTTTTGGAACTACTCA+TGG | - | chr4_2:60354753-60354772 | None:intergenic | 35.0% |
| AGTTCCAAAACTATGTGAAG+AGG | + | chr4_2:60354758-60354777 | Msa0611980:intron | 35.0% | |
| ! | TCAACCTCTTCACATAGTTT+TGG | - | chr4_2:60354765-60354784 | None:intergenic | 35.0% |
| ACAATGAGCATGCTTTCATT+AGG | - | chr4_2:60354886-60354905 | None:intergenic | 35.0% | |
| ! | TCATTGTGAATGACTTGGAA+TGG | + | chr4_2:60354899-60354918 | Msa0611980:intron | 35.0% |
| TATTCTGTTTACCGAGACAT+TGG | + | chr4_2:60355093-60355112 | Msa0611980:intron | 35.0% | |
| ATTCTGTTTACCGAGACATT+GGG | + | chr4_2:60355094-60355113 | Msa0611980:intron | 35.0% | |
| CTCTTGTGAAGGTTAAAAAG+GGG | + | chr4_2:60355327-60355346 | Msa0611980:intron | 35.0% | |
| TCTTGTGAAGGTTAAAAAGG+GGG | + | chr4_2:60355328-60355347 | Msa0611980:intron | 35.0% | |
| TTGTCAAGCAATTGCTATAG+TGG | + | chr4_2:60355693-60355712 | Msa0611980:intron | 35.0% | |
| ! | GTGTGTATTGGGAAAGTTTT+CGG | - | chr4_2:60356040-60356059 | None:intergenic | 35.0% |
| ! | ATCTCGATTTTGTCTACCTT+GGG | + | chr4_2:60356588-60356607 | Msa0611980:intron | 35.0% |
| CATTGTGTTAAAAACCAGAC+CGG | + | chr4_2:60356620-60356639 | Msa0611980:intron | 35.0% | |
| GGTCAAGGCATATAAAATCT+GGG | - | chr4_2:60356859-60356878 | None:intergenic | 35.0% | |
| TGGTCAAGGCATATAAAATC+TGG | - | chr4_2:60356860-60356879 | None:intergenic | 35.0% | |
| AAAAATGTAGACGGTCATCA+GGG | - | chr4_2:60356902-60356921 | None:intergenic | 35.0% | |
| AAAAAATGTAGACGGTCATC+AGG | - | chr4_2:60356903-60356922 | None:intergenic | 35.0% | |
| GAGAGAAGCAATAAAGGTTT+GGG | - | chr4_2:60356992-60357011 | None:intergenic | 35.0% | |
| AGAGAGAAGCAATAAAGGTT+TGG | - | chr4_2:60356993-60357012 | None:intergenic | 35.0% | |
| ACTGAAATCACTGTAAATCG+GGG | - | chr4_2:60357043-60357062 | None:intergenic | 35.0% | |
| GTTGACGGTTATACTTCAAT+CGG | + | chr4_2:60357134-60357153 | Msa0611980:intron | 35.0% | |
| !!! | CAGGTCCTGATTTTAAAACA+AGG | + | chr4_2:60357239-60357258 | Msa0611980:intron | 35.0% |
| ! | TATGTTTAGCTTCTGCTAGA+TGG | + | chr4_2:60357361-60357380 | Msa0611980:intron | 35.0% |
| GCCGAAGACTTCAAATAAAA+TGG | - | chr4_2:60357481-60357500 | None:intergenic | 35.0% | |
| TCTTCGGCTTTCTTGTATTA+TGG | + | chr4_2:60357493-60357512 | Msa0611980:intron | 35.0% | |
| ! | TTACAGTATTATTGCCGGTT+TGG | + | chr4_2:60357578-60357597 | Msa0611980:intron | 35.0% |
| TTGTAAATACAGGACCAAAC+CGG | - | chr4_2:60357595-60357614 | None:intergenic | 35.0% | |
| GGAAATGCCTATGCTTATAT+TGG | + | chr4_2:60357641-60357660 | Msa0611980:intron | 35.0% | |
| TCTATGCAATTAGGCACAAA+TGG | - | chr4_2:60357799-60357818 | None:intergenic | 35.0% | |
| AATTAACTGTTGAGGACTTG+TGG | - | chr4_2:60358130-60358149 | None:intergenic | 35.0% | |
| TTCATCTCAACTACATTGCT+AGG | - | chr4_2:60358170-60358189 | None:intergenic | 35.0% | |
| TTAACTGTTGCACCTTAACA+TGG | + | chr4_2:60358316-60358335 | Msa0611980:intron | 35.0% | |
| !! | GAACGCTTTTGAGAATTACT+AGG | - | chr4_2:60358447-60358466 | None:intergenic | 35.0% |
| AATCATCATATGTTGCAAGC+TGG | - | chr4_2:60358568-60358587 | None:intergenic | 35.0% | |
| !!! | TGATGATTTTGATGATGCTG+TGG | + | chr4_2:60358580-60358599 | Msa0611980:CDS | 35.0% |
| ATGATGCTGTGGTTGTTAAT+GGG | + | chr4_2:60358591-60358610 | Msa0611980:CDS | 35.0% | |
| TGCTAAGCTGAAGAAACTAA+AGG | + | chr4_2:60358655-60358674 | Msa0611980:CDS | 35.0% | |
| TCAAAAAATGTCATTGGGAC+GGG | + | chr4_2:60358785-60358804 | Msa0611980:intron | 35.0% | |
| GACAAGAGACTAATATCCTA+GGG | - | chr4_2:60358837-60358856 | None:intergenic | 35.0% | |
| AGACAAGAGACTAATATCCT+AGG | - | chr4_2:60358838-60358857 | None:intergenic | 35.0% | |
| AGTCTCTTGTCTATTGAAAG+AGG | + | chr4_2:60358846-60358865 | Msa0611980:intron | 35.0% | |
| GTCTCTTGTCTATTGAAAGA+GGG | + | chr4_2:60358847-60358866 | Msa0611980:intron | 35.0% | |
| AGATAACATGCAGTAAAAGC+AGG | - | chr4_2:60358898-60358917 | None:intergenic | 35.0% | |
| CATTGTTAAGGTTCCCATAT+TGG | - | chr4_2:60359168-60359187 | None:intergenic | 35.0% | |
| ATATGGGAACCTTAACAATG+TGG | + | chr4_2:60359168-60359187 | Msa0611980:intron | 35.0% | |
| TATGGGAACCTTAACAATGT+GGG | + | chr4_2:60359169-60359188 | Msa0611980:intron | 35.0% | |
| TGGTATCAGAGTCAGATTAA+GGG | - | chr4_2:60359263-60359282 | None:intergenic | 35.0% | |
| AACAACCACACAAGTGTTTA+AGG | - | chr4_2:60359307-60359326 | None:intergenic | 35.0% | |
| GAGGGAGGATATAAATTACT+CGG | + | chr4_2:60359392-60359411 | Msa0611980:intron | 35.0% | |
| !! | TCAGTTTCTAGGAAGCATTA+TGG | - | chr4_2:60359845-60359864 | None:intergenic | 35.0% |
| ACCTTAACACAAAAAGGGAT+CGG | - | chr4_2:60360009-60360028 | None:intergenic | 35.0% | |
| AAGCCACCTTAACACAAAAA+GGG | - | chr4_2:60360014-60360033 | None:intergenic | 35.0% | |
| !! | TGATGATGGTGATGATCAAA+TGG | + | chr4_2:60360137-60360156 | Msa0611980:CDS | 35.0% |
| ATGAAGAGGACATTGAAAGT+GGG | + | chr4_2:60360178-60360197 | Msa0611980:CDS | 35.0% | |
| ! | ACCTCTTCAAGGTGAAATTT+TGG | + | chr4_2:60360282-60360301 | Msa0611980:intron | 35.0% |
| TCCAAAATTTCACCTTGAAG+AGG | - | chr4_2:60360286-60360305 | None:intergenic | 35.0% | |
| ! | TCTTCAAGGTGAAATTTTGG+AGG | + | chr4_2:60360285-60360304 | Msa0611980:intron | 35.0% |
| GAATCCTAGAAAGAACTACA+AGG | + | chr4_2:60360571-60360590 | Msa0611980:CDS | 35.0% | |
| GCTTTCACTTACTCTTAGAA+TGG | + | chr4_2:60360595-60360614 | Msa0611980:intron | 35.0% | |
| GATAGTTGCATTAATTCCAG+TGG | - | chr4_2:60360783-60360802 | None:intergenic | 35.0% | |
| GGTGATAAGTTCAAAATTGG+TGG | - | chr4_2:60360874-60360893 | None:intergenic | 35.0% | |
| GCAGGTGATAAGTTCAAAAT+TGG | - | chr4_2:60360877-60360896 | None:intergenic | 35.0% | |
| AACTTATCACCTGCTTAGAT+GGG | + | chr4_2:60360883-60360902 | Msa0611980:three_prime_UTR | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4_2:60361025-60361044 | None:intergenic | 35.0% |
| TCAGAATAGAGAGCAAATGC+CGG | - | chr4_2:60352029-60352048 | None:intergenic | 40.0% | |
| AAAAGTTATAACGGTCGCGT+CGG | - | chr4_2:60352158-60352177 | None:intergenic | 40.0% | |
| ATTCGCAGTTCATAAGCAGA+GGG | + | chr4_2:60352298-60352317 | Msa0611980:intron | 40.0% | |
| GACGAGGATGATGAATATGA+TGG | + | chr4_2:60352563-60352582 | Msa0611980:CDS | 40.0% | |
| GGATGATGAATATGATGGCA+AGG | + | chr4_2:60352568-60352587 | Msa0611980:CDS | 40.0% | |
| TGAATATGATGGCAAGGAGA+AGG | + | chr4_2:60352574-60352593 | Msa0611980:CDS | 40.0% | |
| GAATATGATGGCAAGGAGAA+GGG | + | chr4_2:60352575-60352594 | Msa0611980:CDS | 40.0% | |
| ! | GCTTGGGTCTTTTTGTATCT+CGG | - | chr4_2:60352712-60352731 | None:intergenic | 40.0% |
| TGCATGTATAAGCTGGGTTT+AGG | + | chr4_2:60352787-60352806 | Msa0611980:intron | 40.0% | |
| GCATGTATAAGCTGGGTTTA+GGG | + | chr4_2:60352788-60352807 | Msa0611980:intron | 40.0% | |
| ! | TATTTGAAGTCGTTGCATGG+TGG | + | chr4_2:60352931-60352950 | Msa0611980:CDS | 40.0% |
| CAAGATGAAGAAGACGATGA+AGG | + | chr4_2:60352970-60352989 | Msa0611980:CDS | 40.0% | |
| GCAATTTCTTCCTCTTCCTT+TGG | - | chr4_2:60353202-60353221 | None:intergenic | 40.0% | |
| !! | AGAGGAAGATTTTGACCTTG+TGG | + | chr4_2:60353258-60353277 | Msa0611980:CDS | 40.0% |
| CATTATCTTCGTCTTCCACA+AGG | - | chr4_2:60353276-60353295 | None:intergenic | 40.0% | |
| TTATGTTGCCTAAGCATGGT+CGG | + | chr4_2:60353338-60353357 | Msa0611980:intron | 40.0% | |
| ! | ATGGTCGGTTTCCACATTAA+TGG | + | chr4_2:60353353-60353372 | Msa0611980:intron | 40.0% |
| !! | TGGATGAAAAAGTGCTTACG+GGG | + | chr4_2:60353373-60353392 | Msa0611980:intron | 40.0% |
| !! | AATTTTAGAGGAGCGAATGG+AGG | + | chr4_2:60353743-60353762 | Msa0611980:intron | 40.0% |
| !! | TGGAGGAAATTTGGTGTTCA+CGG | + | chr4_2:60353760-60353779 | Msa0611980:intron | 40.0% |
| !! | AATCTTGACTAGTCTTCCCT+TGG | - | chr4_2:60353809-60353828 | None:intergenic | 40.0% |
| !! | TGGGCCTTTTCATCTAAAGT+AGG | - | chr4_2:60353997-60354016 | None:intergenic | 40.0% |
| AGATGAAAAGGCCCAATTTG+AGG | + | chr4_2:60354002-60354021 | Msa0611980:intron | 40.0% | |
| GATGAAAAGGCCCAATTTGA+GGG | + | chr4_2:60354003-60354022 | Msa0611980:intron | 40.0% | |
| GCAATAGCTGAGATTTCTAC+TGG | - | chr4_2:60354060-60354079 | None:intergenic | 40.0% | |
| AGCAATATTCAGCAGAGATG+TGG | + | chr4_2:60354388-60354407 | Msa0611980:intron | 40.0% | |
| CAAGGCCATAACAGCAATAA+AGG | - | chr4_2:60354469-60354488 | None:intergenic | 40.0% | |
| ! | AAGAAGAGGGTGTATATGCA+AGG | - | chr4_2:60354487-60354506 | None:intergenic | 40.0% |
| AGTGACTATCTTCTCTTTGC+AGG | + | chr4_2:60354594-60354613 | Msa0611980:intron | 40.0% | |
| TACTCATGGAAAAAATGGGC+AGG | - | chr4_2:60354739-60354758 | None:intergenic | 40.0% | |
| CATGCTTTCATTAGGTTACG+TGG | - | chr4_2:60354878-60354897 | None:intergenic | 40.0% | |
| CATGCTCATTGTGAATGACT+TGG | + | chr4_2:60354894-60354913 | Msa0611980:intron | 40.0% | |
| AATGGCATATTGCCGGAAAA+TGG | + | chr4_2:60354917-60354936 | Msa0611980:intron | 40.0% | |
| ATATTGCCGGAAAATGGTTC+CGG | + | chr4_2:60354923-60354942 | Msa0611980:intron | 40.0% | |
| GAGACGCAAAAAATGAAAGG+AGG | - | chr4_2:60355048-60355067 | None:intergenic | 40.0% | |
| TTCTGTTTACCGAGACATTG+GGG | + | chr4_2:60355095-60355114 | Msa0611980:intron | 40.0% | |
| AAGGGGGAAATAGTTATGGA+AGG | + | chr4_2:60355344-60355363 | Msa0611980:CDS | 40.0% | |
| GAAGGTTATAGCTTGGCAAT+AGG | - | chr4_2:60355411-60355430 | None:intergenic | 40.0% | |
| GAAGGTAGAAGGTTATAGCT+TGG | - | chr4_2:60355418-60355437 | None:intergenic | 40.0% | |
| ACAAAATCGAGATCCTATGC+AGG | - | chr4_2:60356581-60356600 | None:intergenic | 40.0% | |
| ! | GATCTCGATTTTGTCTACCT+TGG | + | chr4_2:60356587-60356606 | Msa0611980:intron | 40.0% |
| ! | TTCAACCCAATCAAAGCACT+GGG | + | chr4_2:60356645-60356664 | Msa0611980:intron | 40.0% |
| GAAGATGACAACACACTGTT+TGG | - | chr4_2:60356880-60356899 | None:intergenic | 40.0% | |
| AAGCGAGAGAGAAGCAATAA+AGG | - | chr4_2:60356998-60357017 | None:intergenic | 40.0% | |
| CTGAAATCACTGTAAATCGG+GGG | - | chr4_2:60357042-60357061 | None:intergenic | 40.0% | |
| !!! | TTTTAGCTTCAGTAGCAACC+TGG | + | chr4_2:60357111-60357130 | Msa0611980:intron | 40.0% |
| ! | TTTAGCTTCAGTAGCAACCT+GGG | + | chr4_2:60357112-60357131 | Msa0611980:intron | 40.0% |
| TATCGTCATCATCACCAGTT+TGG | + | chr4_2:60357173-60357192 | Msa0611980:intron | 40.0% | |
| !! | GTTGTTTTGTCTGTTGAGTG+AGG | - | chr4_2:60357879-60357898 | None:intergenic | 40.0% |
| TGAACTTCCAGTTGAACTTG+AGG | + | chr4_2:60357906-60357925 | Msa0611980:CDS | 40.0% | |
| AGAATGTCCTCAAGTTCAAC+TGG | - | chr4_2:60357916-60357935 | None:intergenic | 40.0% | |
| TTTATAGCGATAGAATCGGC+TGG | - | chr4_2:60357997-60358016 | None:intergenic | 40.0% | |
| TATAAACGAAGAACAGCCTC+TGG | + | chr4_2:60358011-60358030 | Msa0611980:CDS | 40.0% | |
| AAAAGTTAGAGCTTCCCTTG+AGG | + | chr4_2:60358377-60358396 | Msa0611980:CDS | 40.0% | |
| GCAGATGTTGGAAACAAGAA+AGG | - | chr4_2:60358513-60358532 | None:intergenic | 40.0% | |
| GTCAGTAAGTTTGCAGATGT+TGG | - | chr4_2:60358525-60358544 | None:intergenic | 40.0% | |
| GATGATGCTGTGGTTGTTAA+TGG | + | chr4_2:60358590-60358609 | Msa0611980:CDS | 40.0% | |
| GTAAAAGCAGGACTTCATGT+TGG | - | chr4_2:60358886-60358905 | None:intergenic | 40.0% | |
| GTGTTAAGTGTTTGTCTGGT+TGG | - | chr4_2:60359061-60359080 | None:intergenic | 40.0% | |
| !! | GGAAGTGTTAAGTGTTTGTC+TGG | - | chr4_2:60359065-60359084 | None:intergenic | 40.0% |
| ACAACTTCAATACCCATACG+AGG | + | chr4_2:60359120-60359139 | Msa0611980:intron | 40.0% | |
| CAACTTCAATACCCATACGA+GGG | + | chr4_2:60359121-60359140 | Msa0611980:intron | 40.0% | |
| AATGAGGTCCCACATTGTTA+AGG | - | chr4_2:60359180-60359199 | None:intergenic | 40.0% | |
| !! | CGGGTATTGAATTCGTAATG+AGG | - | chr4_2:60359196-60359215 | None:intergenic | 40.0% |
| AGATTAAGGGTAGCAATGTG+GGG | - | chr4_2:60359250-60359269 | None:intergenic | 40.0% | |
| CAGATTAAGGGTAGCAATGT+GGG | - | chr4_2:60359251-60359270 | None:intergenic | 40.0% | |
| TCAGATTAAGGGTAGCAATG+TGG | - | chr4_2:60359252-60359271 | None:intergenic | 40.0% | |
| GTGGTATCAGAGTCAGATTA+AGG | - | chr4_2:60359264-60359283 | None:intergenic | 40.0% | |
| TCTTTGTCCAATGTTACCGT+TGG | + | chr4_2:60359326-60359345 | Msa0611980:intron | 40.0% | |
| TGTTCTCATGTTGATGCCAA+CGG | - | chr4_2:60359345-60359364 | None:intergenic | 40.0% | |
| AATTACTCGGTTGTTGAGCT+AGG | + | chr4_2:60359405-60359424 | Msa0611980:intron | 40.0% | |
| TAATTCAACCCTTACCACGT+CGG | - | chr4_2:60359505-60359524 | None:intergenic | 40.0% | |
| TAGTCAGGGTAATAGTTCAG+TGG | - | chr4_2:60359874-60359893 | None:intergenic | 40.0% | |
| ! | TCCGATCCCTTTTTGTGTTA+AGG | + | chr4_2:60360005-60360024 | Msa0611980:intron | 40.0% |
| ! | GATCCCTTTTTGTGTTAAGG+TGG | + | chr4_2:60360008-60360027 | Msa0611980:intron | 40.0% |
| GAAGCCACCTTAACACAAAA+AGG | - | chr4_2:60360015-60360034 | None:intergenic | 40.0% | |
| ! | TTTTGTGTTAAGGTGGCTTC+TGG | + | chr4_2:60360015-60360034 | Msa0611980:intron | 40.0% |
| CCTCTTCATCTTGAGATACA+AGG | - | chr4_2:60360167-60360186 | None:intergenic | 40.0% | |
| CCTTGTATCTCAAGATGAAG+AGG | + | chr4_2:60360164-60360183 | Msa0611980:CDS | 40.0% | |
| GATGAAGAGGACATTGAAAG+TGG | + | chr4_2:60360177-60360196 | Msa0611980:CDS | 40.0% | |
| TGAAGAGGACATTGAAAGTG+GGG | + | chr4_2:60360179-60360198 | Msa0611980:CDS | 40.0% | |
| GAAGAAGATGGAAATATCCC+AGG | - | chr4_2:60360318-60360337 | None:intergenic | 40.0% | |
| ! | AAAGCGCTATATCACTTCTC+AGG | + | chr4_2:60360413-60360432 | Msa0611980:CDS | 40.0% |
| GGTTCTTACTTGATCTCATC+AGG | + | chr4_2:60360434-60360453 | Msa0611980:intron | 40.0% | |
| AGCACCTTGTAGTTCTTTCT+AGG | - | chr4_2:60360578-60360597 | None:intergenic | 40.0% | |
| AAAAGCCGTTAAGAATCGCA+AGG | + | chr4_2:60360709-60360728 | Msa0611980:CDS | 40.0% | |
| AAAGCCGTTAAGAATCGCAA+GGG | + | chr4_2:60360710-60360729 | Msa0611980:CDS | 40.0% | |
| ! | TCAGTCGAAGTATCAGATTC+AGG | + | chr4_2:60360801-60360820 | Msa0611980:CDS | 40.0% |
| GAACTTATCACCTGCTTAGA+TGG | + | chr4_2:60360882-60360901 | Msa0611980:three_prime_UTR | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr4_2:60361021-60361040 | None:intergenic | 40.0% |
| GCTACAGACTTCACTGCTAT+TGG | - | chr4_2:60351887-60351906 | None:intergenic | 45.0% | |
| GAAAGTGAGAAGTAACGCAG+GGG | - | chr4_2:60351992-60352011 | None:intergenic | 45.0% | |
| CGAAAGTGAGAAGTAACGCA+GGG | - | chr4_2:60351993-60352012 | None:intergenic | 45.0% | |
| ACGAAAGTGAGAAGTAACGC+AGG | - | chr4_2:60351994-60352013 | None:intergenic | 45.0% | |
| CTTTCGTCTTCTTCAACCTC+CGG | + | chr4_2:60352007-60352026 | Msa0611980:five_prime_UTR | 45.0% | |
| TACAGAATGGCGAAGAAAGG+AGG | + | chr4_2:60352087-60352106 | Msa0611980:exon | 45.0% | |
| AAAGTTATAACGGTCGCGTC+GGG | - | chr4_2:60352157-60352176 | None:intergenic | 45.0% | |
| GATTCGCAGTTCATAAGCAG+AGG | + | chr4_2:60352297-60352316 | Msa0611980:intron | 45.0% | |
| ! | GGGTCTTTTTGTATCTCGGA+GGG | - | chr4_2:60352708-60352727 | None:intergenic | 45.0% |
| ! | TGGGTCTTTTTGTATCTCGG+AGG | - | chr4_2:60352709-60352728 | None:intergenic | 45.0% |
| ACAGAACACTGCCAATGCTT+GGG | - | chr4_2:60352728-60352747 | None:intergenic | 45.0% | |
| AACAGAACACTGCCAATGCT+TGG | - | chr4_2:60352729-60352748 | None:intergenic | 45.0% | |
| ! | TTGCATGGTGGAGATGAAGA+CGG | + | chr4_2:60352943-60352962 | Msa0611980:CDS | 45.0% |
| ! | GCTACAATCAAGTGATGACG+AGG | + | chr4_2:60353174-60353193 | Msa0611980:intron | 45.0% |
| GGATCTGAGTGCTTTGTCAA+AGG | + | chr4_2:60353475-60353494 | Msa0611980:CDS | 45.0% | |
| TCTGAGTGCTTTGTCAAAGG+AGG | + | chr4_2:60353478-60353497 | Msa0611980:CDS | 45.0% | |
| AGGAGCGAATGGAGGAAATT+TGG | + | chr4_2:60353751-60353770 | Msa0611980:intron | 45.0% | |
| !! | GGAGGAAATTTGGTGTTCAC+GGG | + | chr4_2:60353761-60353780 | Msa0611980:intron | 45.0% |
| !! | GAGGAAATTTGGTGTTCACG+GGG | + | chr4_2:60353762-60353781 | Msa0611980:intron | 45.0% |
| !! | AGATTTCTACTGGGTTGGTC+AGG | - | chr4_2:60354050-60354069 | None:intergenic | 45.0% |
| AGCTGAGATTTCTACTGGGT+TGG | - | chr4_2:60354055-60354074 | None:intergenic | 45.0% | |
| ! | TGCTGATTGCCATTGCTTTG+AGG | + | chr4_2:60354127-60354146 | Msa0611980:intron | 45.0% |
| CATCGTGACTATCTTGGCAA+TGG | - | chr4_2:60354268-60354287 | None:intergenic | 45.0% | |
| TCCTAGCATCGTGACTATCT+TGG | - | chr4_2:60354274-60354293 | None:intergenic | 45.0% | |
| TGGATGCATGTCTACCTTGA+GGG | + | chr4_2:60354408-60354427 | Msa0611980:intron | 45.0% | |
| ! | GAGCCTGATCCAATTTTGTC+AGG | - | chr4_2:60354446-60354465 | None:intergenic | 45.0% |
| ! | GGCTCCCTTTATTGCTGTTA+TGG | + | chr4_2:60354461-60354480 | Msa0611980:intron | 45.0% |
| CTGCCCCAGAATTAGTTGAT+TGG | + | chr4_2:60354618-60354637 | Msa0611980:CDS | 45.0% | |
| GACTTGGAATGGCATATTGC+CGG | + | chr4_2:60354910-60354929 | Msa0611980:intron | 45.0% | |
| TATTGCCGGAAAATGGTTCC+GGG | + | chr4_2:60354924-60354943 | Msa0611980:intron | 45.0% | |
| GGGGAAATAGTTATGGAAGG+AGG | + | chr4_2:60355347-60355366 | Msa0611980:CDS | 45.0% | |
| GGACTTGAGTAGAAGGTAGA+AGG | - | chr4_2:60355429-60355448 | None:intergenic | 45.0% | |
| TACCTTCTACTCAAGTCCGA+AGG | + | chr4_2:60355431-60355450 | Msa0611980:CDS | 45.0% | |
| ACCTTCTACTCAAGTCCGAA+GGG | + | chr4_2:60355432-60355451 | Msa0611980:CDS | 45.0% | |
| TCTTCAAGGCGAGCTATTAC+AGG | - | chr4_2:60355476-60355495 | None:intergenic | 45.0% | |
| ! | GCTAGCATCTGTGACTTGTA+AGG | + | chr4_2:60355537-60355556 | Msa0611980:intron | 45.0% |
| TTGCTATAGTGGCGCAATCA+TGG | + | chr4_2:60355704-60355723 | Msa0611980:intron | 45.0% | |
| ACTCGTACGATTCTACGAGT+TGG | - | chr4_2:60355746-60355765 | None:intergenic | 45.0% | |
| TCCCCATCAGATTACGATTC+CGG | - | chr4_2:60355806-60355825 | None:intergenic | 45.0% | |
| GAATCGTAATCTGATGGGGA+CGG | + | chr4_2:60355806-60355825 | Msa0611980:intron | 45.0% | |
| TGAATCGGAGGATCGTAACA+CGG | - | chr4_2:60356535-60356554 | None:intergenic | 45.0% | |
| ATCGAGATCCTATGCAGGAT+CGG | - | chr4_2:60356576-60356595 | None:intergenic | 45.0% | |
| !! | CAGTGCTTTGATTGGGTTGA+AGG | - | chr4_2:60356646-60356665 | None:intergenic | 45.0% |
| CTTCAACCCAATCAAAGCAC+TGG | + | chr4_2:60356644-60356663 | Msa0611980:intron | 45.0% | |
| GCTAACCCAGTGCTTTGATT+GGG | - | chr4_2:60356653-60356672 | None:intergenic | 45.0% | |
| !! | CAATCAAAGCACTGGGTTAG+CGG | + | chr4_2:60356652-60356671 | Msa0611980:intron | 45.0% |
| GACAACACACTGTTTGGTCA+AGG | - | chr4_2:60356874-60356893 | None:intergenic | 45.0% | |
| AAATCACTGTAAATCGGGGG+TGG | - | chr4_2:60357039-60357058 | None:intergenic | 45.0% | |
| TGAAGTATAACCGTCAACCC+AGG | - | chr4_2:60357132-60357151 | None:intergenic | 45.0% | |
| GATCAGCTATGCATCCAAAC+TGG | - | chr4_2:60357190-60357209 | None:intergenic | 45.0% | |
| AGCTGATCCGATGACTGTAT+CGG | + | chr4_2:60357202-60357221 | Msa0611980:intron | 45.0% | |
| GTAAGCATGGCTACCAATGT+AGG | - | chr4_2:60357690-60357709 | None:intergenic | 45.0% | |
| TGGTAGCCATGCTTACACTA+TGG | + | chr4_2:60357694-60357713 | Msa0611980:intron | 45.0% | |
| TAGCCATGCTTACACTATGG+AGG | + | chr4_2:60357697-60357716 | Msa0611980:intron | 45.0% | |
| AGTCCTCCATAGTGTAAGCA+TGG | - | chr4_2:60357703-60357722 | None:intergenic | 45.0% | |
| TGAATCACCAGAAGAAGCAG+TGG | + | chr4_2:60358041-60358060 | Msa0611980:CDS | 45.0% | |
| ATCACTACCACTGCTTCTTC+TGG | - | chr4_2:60358051-60358070 | None:intergenic | 45.0% | |
| TTGCACCTTAACATGGCAGA+AGG | + | chr4_2:60358323-60358342 | Msa0611980:intron | 45.0% | |
| GTGATCCTTCTGCCATGTTA+AGG | - | chr4_2:60358331-60358350 | None:intergenic | 45.0% | |
| ACATGGCAGAAGGATCACAT+TGG | + | chr4_2:60358333-60358352 | Msa0611980:intron | 45.0% | |
| GTGAAGCTATACCCATTAGC+TGG | - | chr4_2:60358474-60358493 | None:intergenic | 45.0% | |
| TTACTTGAGACAAGACCAGC+TGG | - | chr4_2:60358617-60358636 | None:intergenic | 45.0% | |
| ! | TCGGTGTTTGATTGTACCCT+AGG | + | chr4_2:60358818-60358837 | Msa0611980:intron | 45.0% |
| !! | GGACTTCATGTTGGTTTCTC+AGG | - | chr4_2:60358877-60358896 | None:intergenic | 45.0% |
| TCCCACACTGATAAGGTTTC+CGG | - | chr4_2:60359093-60359112 | None:intergenic | 45.0% | |
| ATTGGAGTCCCACACTGATA+AGG | - | chr4_2:60359100-60359119 | None:intergenic | 45.0% | |
| ATCCACGCTAAGTGTGTAAG+CGG | - | chr4_2:60359216-60359235 | None:intergenic | 45.0% | |
| TCTGACTCTGATACCACTGT+TGG | + | chr4_2:60359267-60359286 | Msa0611980:intron | 45.0% | |
| CTGACTCTGATACCACTGTT+GGG | + | chr4_2:60359268-60359287 | Msa0611980:intron | 45.0% | |
| GTTGATGCCAACGGTAACAT+TGG | - | chr4_2:60359336-60359355 | None:intergenic | 45.0% | |
| AACAACGTAGTGAAGAGCAG+TGG | + | chr4_2:60359361-60359380 | Msa0611980:intron | 45.0% | |
| ACAACGTAGTGAAGAGCAGT+GGG | + | chr4_2:60359362-60359381 | Msa0611980:intron | 45.0% | |
| GACGTGGTAAGGGTTGAATT+AGG | + | chr4_2:60359504-60359523 | Msa0611980:intron | 45.0% | |
| AGTGGTCAGCATCAGTTTCT+AGG | - | chr4_2:60359856-60359875 | None:intergenic | 45.0% | |
| TCACGAATAGCGTCTCTCTT+AGG | - | chr4_2:60360054-60360073 | None:intergenic | 45.0% | |
| ! | TGGTGCTGGAGTTACAATTG+AGG | + | chr4_2:60360107-60360126 | Msa0611980:CDS | 45.0% |
| GAAGAGGACATTGAAAGTGG+GGG | + | chr4_2:60360180-60360199 | Msa0611980:CDS | 45.0% | |
| TGACCTACTCAACCTCTTCA+AGG | + | chr4_2:60360271-60360290 | Msa0611980:CDS | 45.0% | |
| TCACCTTGAAGAGGTTGAGT+AGG | - | chr4_2:60360277-60360296 | None:intergenic | 45.0% | |
| !! | AATTTTGGAGGCTGTTTGCC+TGG | + | chr4_2:60360297-60360316 | Msa0611980:intron | 45.0% |
| !! | ATTTTGGAGGCTGTTTGCCT+GGG | + | chr4_2:60360298-60360317 | Msa0611980:intron | 45.0% |
| CTTCGACATCTACAGCACAT+TGG | - | chr4_2:60360513-60360532 | None:intergenic | 45.0% | |
| CTGTAGATGTCGAAGAACAG+AGG | + | chr4_2:60360518-60360537 | Msa0611980:intron | 45.0% | |
| ACAGAGGACTAACTCGTAGT+CGG | + | chr4_2:60360534-60360553 | Msa0611980:CDS | 45.0% | |
| ACTAACTCGTAGTCGGAACA+AGG | + | chr4_2:60360541-60360560 | Msa0611980:CDS | 45.0% | |
| CTGTCCCTTGCGATTCTTAA+CGG | - | chr4_2:60360717-60360736 | None:intergenic | 45.0% | |
| ! | GACAGGTTCAGAGTATCAGA+AGG | + | chr4_2:60360732-60360751 | Msa0611980:CDS | 45.0% |
| AGAAGGCCAAATGCACCTTA+TGG | + | chr4_2:60360749-60360768 | Msa0611980:CDS | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4_2:60361022-60361041 | None:intergenic | 45.0% |
| !! | AAAAAAAAAAAAATAAGATT+TGG | - | chr4_2:60352413-60352432 | None:intergenic | 5.0% |
| !! | TTAAAAATAAATTATATAAG+TGG | - | chr4_2:60356375-60356394 | None:intergenic | 5.0% |
| TAACTAGGTTGCTGTGTGCG+AGG | - | chr4_2:60351909-60351928 | None:intergenic | 50.0% | |
| GAATAGAGAGCAAATGCCGG+AGG | - | chr4_2:60352026-60352045 | None:intergenic | 50.0% | |
| AGAATGGCGAAGAAAGGAGG+AGG | + | chr4_2:60352090-60352109 | Msa0611980:exon | 50.0% | |
| ! | GGCAAGGAGAAGGGCTTTAT+TGG | + | chr4_2:60352584-60352603 | Msa0611980:CDS | 50.0% |
| !! | GTTGGAAGAAAGCACCGACA+TGG | + | chr4_2:60353009-60353028 | Msa0611980:CDS | 50.0% |
| TGTGGAAACCGACCATGCTT+AGG | - | chr4_2:60353349-60353368 | None:intergenic | 50.0% | |
| GCCAAGATAGTCACGATGCT+AGG | + | chr4_2:60354270-60354289 | Msa0611980:intron | 50.0% | |
| GTGGATGCATGTCTACCTTG+AGG | + | chr4_2:60354407-60354426 | Msa0611980:intron | 50.0% | |
| ATTGCCGGAAAATGGTTCCG+GGG | + | chr4_2:60354925-60354944 | Msa0611980:intron | 50.0% | |
| !! | ATGATCGACTTGCTGCCCTT+CGG | - | chr4_2:60355450-60355469 | None:intergenic | 50.0% |
| AGCTCGCCTTGAAGAGATCA+AGG | + | chr4_2:60355481-60355500 | Msa0611980:CDS | 50.0% | |
| CCATCAGATTACGATTCCGG+CGG | - | chr4_2:60355803-60355822 | None:intergenic | 50.0% | |
| CGCCGGAATCGTAATCTGAT+GGG | + | chr4_2:60355801-60355820 | Msa0611980:intron | 50.0% | |
| GCCGGAATCGTAATCTGATG+GGG | + | chr4_2:60355802-60355821 | Msa0611980:intron | 50.0% | |
| AGCGGTGGAATCGAGTGTTT+CGG | + | chr4_2:60355855-60355874 | Msa0611980:intron | 50.0% | |
| GTGCGCCTTCCTCAAAATTC+CGG | + | chr4_2:60355894-60355913 | Msa0611980:intron | 50.0% | |
| TGCGCCTTCCTCAAAATTCC+GGG | + | chr4_2:60355895-60355914 | Msa0611980:intron | 50.0% | |
| !! | CGAACCCGGAATTTTGAGGA+AGG | - | chr4_2:60355902-60355921 | None:intergenic | 50.0% |
| TCCTCAAAATTCCGGGTTCG+CGG | + | chr4_2:60355902-60355921 | Msa0611980:intron | 50.0% | |
| TCGAGATCCTATGCAGGATC+GGG | - | chr4_2:60356575-60356594 | None:intergenic | 50.0% | |
| CACAATGACTATTGCGCCCA+AGG | - | chr4_2:60356607-60356626 | None:intergenic | 50.0% | |
| !! | GCTTTGATTGGGTTGAAGGC+CGG | - | chr4_2:60356642-60356661 | None:intergenic | 50.0% |
| CGCTAACCCAGTGCTTTGAT+TGG | - | chr4_2:60356654-60356673 | None:intergenic | 50.0% | |
| CTAACAGTGACCAGGTCATG+CGG | - | chr4_2:60356689-60356708 | None:intergenic | 50.0% | |
| ! | TCAGTAGCAACCTGGGTTGA+CGG | + | chr4_2:60357119-60357138 | Msa0611980:intron | 50.0% |
| ATCCGATGACTGTATCGGAC+CGG | + | chr4_2:60357207-60357226 | Msa0611980:intron | 50.0% | |
| TCAGGACCTGACATAACTGC+CGG | - | chr4_2:60357229-60357248 | None:intergenic | 50.0% | |
| TCACATTGGCGTGCAGAGTT+CGG | + | chr4_2:60358347-60358366 | Msa0611980:CDS | 50.0% | |
| AAGCGTTCGAGACCAGCTAA+TGG | + | chr4_2:60358459-60358478 | Msa0611980:CDS | 50.0% | |
| AGCGTTCGAGACCAGCTAAT+GGG | + | chr4_2:60358460-60358479 | Msa0611980:CDS | 50.0% | |
| TGGGACGGGTCTTCTTCTTT+CGG | + | chr4_2:60358799-60358818 | Msa0611980:intron | 50.0% | |
| CACTTAACACTTCCACCTGC+CGG | + | chr4_2:60359071-60359090 | Msa0611980:intron | 50.0% | |
| ACACTGATAAGGTTTCCGGC+AGG | - | chr4_2:60359089-60359108 | None:intergenic | 50.0% | |
| TGCCGGAAACCTTATCAGTG+TGG | + | chr4_2:60359088-60359107 | Msa0611980:intron | 50.0% | |
| GCCGGAAACCTTATCAGTGT+GGG | + | chr4_2:60359089-60359108 | Msa0611980:intron | 50.0% | |
| TCCACGCTAAGTGTGTAAGC+GGG | - | chr4_2:60359215-60359234 | None:intergenic | 50.0% | |
| TAAGGGTAGCAATGTGGGGA+TGG | - | chr4_2:60359246-60359265 | None:intergenic | 50.0% | |
| GATACCACTGTTGGGACTTC+CGG | + | chr4_2:60359276-60359295 | Msa0611980:intron | 50.0% | |
| ATACCACTGTTGGGACTTCC+GGG | + | chr4_2:60359277-60359296 | Msa0611980:intron | 50.0% | |
| ! | ACAAGTGTTTAAGGCTCCCC+CGG | - | chr4_2:60359298-60359317 | None:intergenic | 50.0% |
| GGGAGCCTTAAACACTTGTG+TGG | + | chr4_2:60359299-60359318 | Msa0611980:intron | 50.0% | |
| CAACGTAGTGAAGAGCAGTG+GGG | + | chr4_2:60359363-60359382 | Msa0611980:intron | 50.0% | |
| GAGACGCTATTCGTGAACGA+CGG | + | chr4_2:60360058-60360077 | Msa0611980:CDS | 50.0% | |
| AGACGCTATTCGTGAACGAC+GGG | + | chr4_2:60360059-60360078 | Msa0611980:CDS | 50.0% | |
| GACGGGAAAGACATGAGAAG+CGG | + | chr4_2:60360076-60360095 | Msa0611980:CDS | 50.0% | |
| ACGGGAAAGACATGAGAAGC+GGG | + | chr4_2:60360077-60360096 | Msa0611980:CDS | 50.0% | |
| AAGACATGAGAAGCGGGTGA+TGG | + | chr4_2:60360083-60360102 | Msa0611980:CDS | 50.0% | |
| CGTTAAGAATCGCAAGGGAC+AGG | + | chr4_2:60360715-60360734 | Msa0611980:CDS | 50.0% | |
| AGGCCAAATGCACCTTATGG+CGG | + | chr4_2:60360752-60360771 | Msa0611980:CDS | 50.0% | |
| AGTTACACGCCCATCTAAGC+AGG | - | chr4_2:60360895-60360914 | None:intergenic | 50.0% | |
| !! | CGCAGTTGGGAGGGGTATTA+GGG | - | chr4_2:60351949-60351968 | None:intergenic | 55.0% |
| ! | CAGGGGAGTGCAACGTAAGA+CGG | - | chr4_2:60351975-60351994 | None:intergenic | 55.0% |
| CTCGTCGTCCATGTCTTCAG+TGG | - | chr4_2:60352181-60352200 | None:intergenic | 55.0% | |
| ! | GGAGGAAGACGATGATGACG+AGG | + | chr4_2:60352547-60352566 | Msa0611980:CDS | 55.0% |
| ! | AAGTGATGACGAGGCCCCAA+AGG | + | chr4_2:60353183-60353202 | Msa0611980:CDS | 55.0% |
| TGCATGTCTACCTTGAGGGC+AGG | + | chr4_2:60354412-60354431 | Msa0611980:intron | 55.0% | |
| GGATTCAACACCTGCCCTCA+AGG | - | chr4_2:60354425-60354444 | None:intergenic | 55.0% | |
| TCACAGGGTCCCCAATGTCT+CGG | - | chr4_2:60355107-60355126 | None:intergenic | 55.0% | |
| GCCCTTCGGACTTGAGTAGA+AGG | - | chr4_2:60355436-60355455 | None:intergenic | 55.0% | |
| CCGCCGGAATCGTAATCTGA+TGG | + | chr4_2:60355800-60355819 | Msa0611980:intron | 55.0% | |
| ! | ACGCATTTTCGCGGCGATTC+CGG | - | chr4_2:60355832-60355851 | None:intergenic | 55.0% |
| ! | ACCGCTTCCACGCATTTTCG+CGG | - | chr4_2:60355841-60355860 | None:intergenic | 55.0% |
| ! | GTGTTTCGGCCGATTCTGTG+CGG | + | chr4_2:60355869-60355888 | Msa0611980:intron | 55.0% |
| CCTCAAAATTCCGGGTTCGC+GGG | + | chr4_2:60355903-60355922 | Msa0611980:intron | 55.0% | |
| AAAATTCCGGGTTCGCGGGT+CGG | + | chr4_2:60355907-60355926 | Msa0611980:intron | 55.0% | |
| TCCTATGCAGGATCGGGGAA+GGG | - | chr4_2:60356569-60356588 | None:intergenic | 55.0% | |
| ATCCTATGCAGGATCGGGGA+AGG | - | chr4_2:60356570-60356589 | None:intergenic | 55.0% | |
| CGAGATCCTATGCAGGATCG+GGG | - | chr4_2:60356574-60356593 | None:intergenic | 55.0% | |
| AATCGGGGGTGGAAGAATGC+AGG | - | chr4_2:60357028-60357047 | None:intergenic | 55.0% | |
| TGCCGGTCCGATACAGTCAT+CGG | - | chr4_2:60357212-60357231 | None:intergenic | 55.0% | |
| ATCGGACCGGCAGTTATGTC+AGG | + | chr4_2:60357220-60357239 | Msa0611980:intron | 55.0% | |
| GCGATAGAATCGGCTGGCAT+TGG | - | chr4_2:60357991-60358010 | None:intergenic | 55.0% | |
| GGTGATTCAGCAGAGACCAG+AGG | - | chr4_2:60358030-60358049 | None:intergenic | 55.0% | |
| ! | GTGGTTGTTAATGGGCCAGC+TGG | + | chr4_2:60358599-60358618 | Msa0611980:CDS | 55.0% |
| CTGATAAGGTTTCCGGCAGG+TGG | - | chr4_2:60359086-60359105 | None:intergenic | 55.0% | |
| GTGGTTGGACACCCTCGTAT+GGG | - | chr4_2:60359135-60359154 | None:intergenic | 55.0% | |
| TGTGGTTGGACACCCTCGTA+TGG | - | chr4_2:60359136-60359155 | None:intergenic | 55.0% | |
| ACCCGCTTACACACTTAGCG+TGG | + | chr4_2:60359211-60359230 | Msa0611980:intron | 55.0% | |
| TACCACTGTTGGGACTTCCG+GGG | + | chr4_2:60359278-60359297 | Msa0611980:intron | 55.0% | |
| TTGTTGAGCTAGGTGCGAGG+AGG | + | chr4_2:60359415-60359434 | Msa0611980:intron | 55.0% | |
| AGTGGCACACCTCACCTTAC+AGG | + | chr4_2:60359479-60359498 | Msa0611980:intron | 55.0% | |
| CTTACAGGCCGACGTGGTAA+GGG | + | chr4_2:60359494-60359513 | Msa0611980:intron | 55.0% | |
| !! | CATGAGAAGCGGGTGATGGA+TGG | + | chr4_2:60360087-60360106 | Msa0611980:CDS | 55.0% |
| AGCTGCAAAACGCGCTGCAA+AGG | + | chr4_2:60360245-60360264 | Msa0611980:CDS | 55.0% | |
| ACAGTCTCCTCTGGCAACGA+GGG | - | chr4_2:60360387-60360406 | None:intergenic | 55.0% | |
| TTGCCAGAGGAGACTGTGGA+CGG | + | chr4_2:60360390-60360409 | Msa0611980:CDS | 55.0% | |
| TTTCCGTCCACAGTCTCCTC+TGG | - | chr4_2:60360396-60360415 | None:intergenic | 55.0% | |
| GGCCAAATGCACCTTATGGC+GGG | + | chr4_2:60360753-60360772 | Msa0611980:CDS | 55.0% | |
| GCCAAATGCACCTTATGGCG+GGG | + | chr4_2:60360754-60360773 | Msa0611980:CDS | 55.0% | |
| TCCCCGCCATAAGGTGCATT+TGG | - | chr4_2:60360758-60360777 | None:intergenic | 55.0% | |
| !! | GCGCAGTTGGGAGGGGTATT+AGG | - | chr4_2:60351950-60351969 | None:intergenic | 60.0% |
| ! | GGGAGTGCAACGTAAGACGG+CGG | - | chr4_2:60351972-60351991 | None:intergenic | 60.0% |
| AACTGATGAGGACGGCGACG+AGG | + | chr4_2:60352526-60352545 | Msa0611980:CDS | 60.0% | |
| TGACGAGGCCCCAAAGGAAG+AGG | + | chr4_2:60353189-60353208 | Msa0611980:CDS | 60.0% | |
| ! | CCGACCCCGGAACCATTTTC+CGG | - | chr4_2:60354932-60354951 | None:intergenic | 60.0% |
| CCGGAAAATGGTTCCGGGGT+CGG | + | chr4_2:60354929-60354948 | Msa0611980:intron | 60.0% | |
| GAAAATGGTTCCGGGGTCGG+TGG | + | chr4_2:60354932-60354951 | Msa0611980:intron | 60.0% | |
| ! | ATTCTAGAGGCCACCGACCC+CGG | - | chr4_2:60354945-60354964 | None:intergenic | 60.0% |
| GAGACATTGGGGACCCTGTG+AGG | + | chr4_2:60355106-60355125 | Msa0611980:intron | 60.0% | |
| TTACGATTCCGGCGGCGTTC+CGG | - | chr4_2:60355795-60355814 | None:intergenic | 60.0% | |
| CGTAATCTGATGGGGACGGC+CGG | + | chr4_2:60355810-60355829 | Msa0611980:intron | 60.0% | |
| GGAATCGCCGCGAAAATGCG+TGG | + | chr4_2:60355831-60355850 | Msa0611980:intron | 60.0% | |
| GCCGCGAAAATGCGTGGAAG+CGG | + | chr4_2:60355837-60355856 | Msa0611980:intron | 60.0% | |
| GCGAAAATGCGTGGAAGCGG+TGG | + | chr4_2:60355840-60355859 | Msa0611980:intron | 60.0% | |
| ! | CCCGCGAACCCGGAATTTTG+AGG | - | chr4_2:60355906-60355925 | None:intergenic | 60.0% |
| AAATTCCGGGTTCGCGGGTC+GGG | + | chr4_2:60355908-60355927 | Msa0611980:intron | 60.0% | |
| ACCCTTCCCCGATCCTGCAT+AGG | + | chr4_2:60356565-60356584 | Msa0611980:intron | 60.0% | |
| !! | GATTGGGTTGAAGGCCGGTC+TGG | - | chr4_2:60356637-60356656 | None:intergenic | 60.0% |
| !! | AAGCACTGGGTTAGCGGCTG+CGG | + | chr4_2:60356658-60356677 | Msa0611980:intron | 60.0% |
| ACCACTGTTGGGACTTCCGG+GGG | + | chr4_2:60359279-60359298 | Msa0611980:intron | 60.0% | |
| CGTAGTGAAGAGCAGTGGGG+CGG | + | chr4_2:60359366-60359385 | Msa0611980:intron | 60.0% | |
| GTAGTGAAGAGCAGTGGGGC+GGG | + | chr4_2:60359367-60359386 | Msa0611980:intron | 60.0% | |
| CGGTTGTTGAGCTAGGTGCG+AGG | + | chr4_2:60359412-60359431 | Msa0611980:intron | 60.0% | |
| CCTTACCACGTCGGCCTGTA+AGG | - | chr4_2:60359496-60359515 | None:intergenic | 60.0% | |
| CCTTACAGGCCGACGTGGTA+AGG | + | chr4_2:60359493-60359512 | Msa0611980:intron | 60.0% | |
| !! | AAGCGGGTGATGGATGGTGC+TGG | + | chr4_2:60360093-60360112 | Msa0611980:CDS | 60.0% |
| CAGTCTCCTCTGGCAACGAG+GGG | - | chr4_2:60360386-60360405 | None:intergenic | 60.0% | |
| CACAGTCTCCTCTGGCAACG+AGG | - | chr4_2:60360388-60360407 | None:intergenic | 60.0% | |
| CTCGTTGCCAGAGGAGACTG+TGG | + | chr4_2:60360386-60360405 | Msa0611980:CDS | 60.0% | |
| ! | CCAGTGGATTCCCCGCCATA+AGG | - | chr4_2:60360767-60360786 | None:intergenic | 60.0% |
| ! | CCTTATGGCGGGGAATCCAC+TGG | + | chr4_2:60360764-60360783 | Msa0611980:CDS | 60.0% |
| CGTAAGACGGCGGCGCAGTT+GGG | - | chr4_2:60351962-60351981 | None:intergenic | 65.0% | |
| ACGTAAGACGGCGGCGCAGT+TGG | - | chr4_2:60351963-60351982 | None:intergenic | 65.0% | |
| TGATGAGGACGGCGACGAGG+AGG | + | chr4_2:60352529-60352548 | Msa0611980:CDS | 65.0% | |
| GGCGCACAGCCGCACAGAAT+CGG | - | chr4_2:60355881-60355900 | None:intergenic | 65.0% | |
| TGCGGTCACACCGCATGACC+TGG | + | chr4_2:60356676-60356695 | Msa0611980:intron | 65.0% | |
| TCCCCCGGAAGTCCCAACAG+TGG | - | chr4_2:60359283-60359302 | None:intergenic | 65.0% | |
| CCACGTCGGCCTGTAAGGTG+AGG | - | chr4_2:60359491-60359510 | None:intergenic | 65.0% | |
| CCTCACCTTACAGGCCGACG+TGG | + | chr4_2:60359488-60359507 | Msa0611980:intron | 65.0% | |
| AGCTGTCCCCTCGTTGCCAG+AGG | + | chr4_2:60360377-60360396 | Msa0611980:CDS | 65.0% | |
| AGACGGCGGCGCAGTTGGGA+GGG | - | chr4_2:60351958-60351977 | None:intergenic | 70.0% | |
| AAGACGGCGGCGCAGTTGGG+AGG | - | chr4_2:60351959-60351978 | None:intergenic | 70.0% | |
| ATTCCGGCGGCGTTCCGGCA+CGG | - | chr4_2:60355790-60355809 | None:intergenic | 70.0% | |
| GTGAAGAGCAGTGGGGCGGG+AGG | + | chr4_2:60359370-60359389 | Msa0611980:intron | 70.0% | |
| AAGAGCAGTGGGGCGGGAGG+AGG | + | chr4_2:60359373-60359392 | Msa0611980:intron | 70.0% | |
| AGAGCAGTGGGGCGGGAGGA+GGG | + | chr4_2:60359374-60359393 | Msa0611980:intron | 70.0% | |
| GACGGCGGCGCAGTTGGGAG+GGG | - | chr4_2:60351957-60351976 | None:intergenic | 75.0% | |
| CTCGCAACCCCCCACCGTGC+CGG | + | chr4_2:60355773-60355792 | Msa0611980:intron | 75.0% | |
| GCGAACCCGACCCGCGAACC+CGG | - | chr4_2:60355916-60355935 | None:intergenic | 75.0% | |
| ! | CGGCGTTCCGGCACGGTGGG+GGG | - | chr4_2:60355783-60355802 | None:intergenic | 80.0% |
| ! | GCGGCGTTCCGGCACGGTGG+GGG | - | chr4_2:60355784-60355803 | None:intergenic | 80.0% |
| ! | GGCGGCGTTCCGGCACGGTG+GGG | - | chr4_2:60355785-60355804 | None:intergenic | 80.0% |
| ! | CGGCGGCGTTCCGGCACGGT+GGG | - | chr4_2:60355786-60355805 | None:intergenic | 80.0% |
| ! | CCACCGTGCCGGAACGCCGC+CGG | + | chr4_2:60355784-60355803 | Msa0611980:intron | 80.0% |
| ! | CGCGGGTCGGGTTCGCGACC+CGG | + | chr4_2:60355920-60355939 | Msa0611980:intron | 80.0% |
| ! | GCAGTGGGGCGGGAGGAGGG+AGG | + | chr4_2:60359377-60359396 | Msa0611980:intron | 80.0% |
| ! | CCGGCGGCGTTCCGGCACGG+TGG | - | chr4_2:60355787-60355806 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 60351863 | 60361089 | 60351863 | ID=Msa0611980;Name=Msa0611980 |
| chr4_2 | mRNA | 60351863 | 60361089 | 60351863 | ID=Msa0611980-mRNA-1;Parent=Msa0611980;Name=Msa0611980-mRNA-1;_AED=0.08;_eAED=0.08;_QI=230|1|1|1|1|1|16|260|657 |
| chr4_2 | exon | 60351863 | 60352210 | 60351863 | ID=Msa0611980-mRNA-1:exon:16164;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60352306 | 60352397 | 60352306 | ID=Msa0611980-mRNA-1:exon:16165;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60352509 | 60352611 | 60352509 | ID=Msa0611980-mRNA-1:exon:16166;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60352914 | 60353053 | 60352914 | ID=Msa0611980-mRNA-1:exon:16167;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60353175 | 60353312 | 60353175 | ID=Msa0611980-mRNA-1:exon:16168;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60353443 | 60353522 | 60353443 | ID=Msa0611980-mRNA-1:exon:16169;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60354616 | 60354703 | 60354616 | ID=Msa0611980-mRNA-1:exon:16170;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60355338 | 60355517 | 60355338 | ID=Msa0611980-mRNA-1:exon:16171;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60357889 | 60358062 | 60357889 | ID=Msa0611980-mRNA-1:exon:16172;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60358167 | 60358244 | 60358167 | ID=Msa0611980-mRNA-1:exon:16173;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60358342 | 60358481 | 60358342 | ID=Msa0611980-mRNA-1:exon:16174;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60358565 | 60358676 | 60358565 | ID=Msa0611980-mRNA-1:exon:16175;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60360027 | 60360292 | 60360027 | ID=Msa0611980-mRNA-1:exon:16176;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60360371 | 60360434 | 60360371 | ID=Msa0611980-mRNA-1:exon:16177;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60360524 | 60360592 | 60360524 | ID=Msa0611980-mRNA-1:exon:16178;Parent=Msa0611980-mRNA-1 |
| chr4_2 | exon | 60360698 | 60361089 | 60360698 | ID=Msa0611980-mRNA-1:exon:16179;Parent=Msa0611980-mRNA-1 |
| chr4_2 | five_prime_UTR | 60351863 | 60352092 | 60351863 | ID=Msa0611980-mRNA-1:five_prime_utr;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60352093 | 60352210 | 60352093 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60352306 | 60352397 | 60352306 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60352509 | 60352611 | 60352509 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60352914 | 60353053 | 60352914 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60353175 | 60353312 | 60353175 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60353443 | 60353522 | 60353443 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60354616 | 60354703 | 60354616 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60355338 | 60355517 | 60355338 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60357889 | 60358062 | 60357889 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60358167 | 60358244 | 60358167 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60358342 | 60358481 | 60358342 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60358565 | 60358676 | 60358565 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60360027 | 60360292 | 60360027 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60360371 | 60360434 | 60360371 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60360524 | 60360592 | 60360524 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | CDS | 60360698 | 60360829 | 60360698 | ID=Msa0611980-mRNA-1:cds;Parent=Msa0611980-mRNA-1 |
| chr4_2 | three_prime_UTR | 60360830 | 60361089 | 60360830 | ID=Msa0611980-mRNA-1:three_prime_utr;Parent=Msa0611980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
