Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0150300 | XP_013466257.1 | 97.510 | 482 | 3 | 1 | 1 | 473 | 1 | 482 | 0.0 | 943 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0150300 | sp|Q93ZV7|LA1_ARATH | 51.810 | 442 | 152 | 8 | 1 | 430 | 1 | 393 | 2.49e-140 | 412 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0150300 | A0A072VFS9 | 97.510 | 482 | 3 | 1 | 1 | 473 | 1 | 482 | 0.0 | 943 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa0150300 | 0.810111 | 1.356125e-50 | -8.615850e-47 |
| Msa0003780 | Msa0150300 | 0.868581 | 5.872095e-66 | -8.615850e-47 |
| Msa0009430 | Msa0150300 | 0.864235 | 1.407021e-64 | -8.615850e-47 |
| Msa0011960 | Msa0150300 | 0.827562 | 1.461168e-54 | -8.615850e-47 |
| Msa0025730 | Msa0150300 | 0.812058 | 5.132396e-51 | -8.615850e-47 |
| Msa0027260 | Msa0150300 | 0.820027 | 8.518252e-53 | -8.615850e-47 |
| Msa0032090 | Msa0150300 | 0.849607 | 2.901309e-60 | -8.615850e-47 |
| Msa0032430 | Msa0150300 | 0.839980 | 1.145285e-57 | -8.615850e-47 |
| Msa0032580 | Msa0150300 | 0.823844 | 1.112977e-53 | -8.615850e-47 |
| Msa0032920 | Msa0150300 | -0.804645 | 1.956102e-49 | -8.615850e-47 |
| Msa0033110 | Msa0150300 | 0.848196 | 7.148142e-60 | -8.615850e-47 |
| Msa0033260 | Msa0150300 | 0.848171 | 7.263576e-60 | -8.615850e-47 |
| Msa0037250 | Msa0150300 | 0.837934 | 3.876530e-57 | -8.615850e-47 |
| Msa0040690 | Msa0150300 | 0.848359 | 6.445972e-60 | -8.615850e-47 |
| Msa0043660 | Msa0150300 | 0.822402 | 2.415237e-53 | -8.615850e-47 |
| Msa0043980 | Msa0150300 | 0.805113 | 1.561483e-49 | -8.615850e-47 |
| Msa0047160 | Msa0150300 | 0.851014 | 1.168854e-60 | -8.615850e-47 |
| Msa0054440 | Msa0150300 | 0.825895 | 3.652021e-54 | -8.615850e-47 |
| Msa0054480 | Msa0150300 | 0.807933 | 3.968059e-50 | -8.615850e-47 |
| Msa0055180 | Msa0150300 | 0.803537 | 3.324589e-49 | -8.615850e-47 |
| Msa0056470 | Msa0150300 | 0.856112 | 4.008989e-62 | -8.615850e-47 |
| Msa0059040 | Msa0150300 | 0.815250 | 1.017726e-51 | -8.615850e-47 |
| Msa0059110 | Msa0150300 | 0.844637 | 6.682248e-59 | -8.615850e-47 |
| Msa0070700 | Msa0150300 | 0.800356 | 1.497489e-48 | -8.615850e-47 |
| Msa0072420 | Msa0150300 | 0.868564 | 5.944050e-66 | -8.615850e-47 |
| Msa0073480 | Msa0150300 | 0.818222 | 2.193419e-52 | -8.615850e-47 |
| Msa0079380 | Msa0150300 | 0.832992 | 6.888040e-56 | -8.615850e-47 |
| Msa0084380 | Msa0150300 | 0.803062 | 4.170338e-49 | -8.615850e-47 |
| Msa0086750 | Msa0150300 | 0.801819 | 7.519790e-49 | -8.615850e-47 |
| Msa0090360 | Msa0150300 | 0.853884 | 1.778533e-61 | -8.615850e-47 |
| Msa0090520 | Msa0150300 | 0.841726 | 3.988782e-58 | -8.615850e-47 |
| Msa0091410 | Msa0150300 | 0.851699 | 7.486699e-61 | -8.615850e-47 |
| Msa0094470 | Msa0150300 | 0.868731 | 5.251917e-66 | -8.615850e-47 |
| Msa0112770 | Msa0150300 | 0.802566 | 5.279359e-49 | -8.615850e-47 |
| Msa0115400 | Msa0150300 | 0.815840 | 7.523294e-52 | -8.615850e-47 |
| Msa0116850 | Msa0150300 | 0.813244 | 2.823166e-51 | -8.615850e-47 |
| Msa0118590 | Msa0150300 | 0.800264 | 1.563529e-48 | -8.615850e-47 |
| Msa0125450 | Msa0150300 | 0.807787 | 4.262298e-50 | -8.615850e-47 |
| Msa0125540 | Msa0150300 | 0.816939 | 4.269374e-52 | -8.615850e-47 |
| Msa0127020 | Msa0150300 | 0.845476 | 3.966580e-59 | -8.615850e-47 |
| Msa0127050 | Msa0150300 | 0.805612 | 1.227289e-49 | -8.615850e-47 |
| Msa0128860 | Msa0150300 | 0.808949 | 2.408032e-50 | -8.615850e-47 |
| Msa0137550 | Msa0150300 | 0.834758 | 2.491079e-56 | -8.615850e-47 |
| Msa0137840 | Msa0150300 | 0.843995 | 9.942790e-59 | -8.615850e-47 |
| Msa0137990 | Msa0150300 | 0.841511 | 4.545958e-58 | -8.615850e-47 |
| Msa0140650 | Msa0150300 | 0.808683 | 2.745871e-50 | -8.615850e-47 |
| Msa0140820 | Msa0150300 | 0.858520 | 7.784810e-63 | -8.615850e-47 |
| Msa0144370 | Msa0150300 | 0.817212 | 3.707536e-52 | -8.615850e-47 |
| Msa0146340 | Msa0150300 | 0.847195 | 1.348267e-59 | -8.615850e-47 |
| Msa0149200 | Msa0150300 | 0.818328 | 2.075488e-52 | -8.615850e-47 |
| Msa0150300 | Msa0159170 | 0.831337 | 1.767800e-55 | -8.615850e-47 |
| Msa0150300 | Msa0169280 | 0.841991 | 3.396157e-58 | -8.615850e-47 |
| Msa0150300 | Msa0169310 | 0.812561 | 3.985964e-51 | -8.615850e-47 |
| Msa0150300 | Msa0172070 | 0.842527 | 2.449637e-58 | -8.615850e-47 |
| Msa0150300 | Msa0172970 | 0.815806 | 7.655491e-52 | -8.615850e-47 |
| Msa0150300 | Msa0174730 | 0.810643 | 1.040820e-50 | -8.615850e-47 |
| Msa0150300 | Msa0183900 | 0.838024 | 3.677060e-57 | -8.615850e-47 |
| Msa0150300 | Msa0184040 | 0.855511 | 6.005796e-62 | -8.615850e-47 |
| Msa0150300 | Msa0184780 | 0.822873 | 1.876613e-53 | -8.615850e-47 |
| Msa0150300 | Msa0189300 | 0.838275 | 3.168326e-57 | -8.615850e-47 |
| Msa0150300 | Msa0189320 | 0.878158 | 3.522326e-69 | -8.615850e-47 |
| Msa0150300 | Msa0189700 | 0.811223 | 7.796961e-51 | -8.615850e-47 |
| Msa0150300 | Msa0190720 | 0.823484 | 1.351056e-53 | -8.615850e-47 |
| Msa0150300 | Msa0204960 | 0.808959 | 2.396406e-50 | -8.615850e-47 |
| Msa0150300 | Msa0209350 | 0.819012 | 1.451864e-52 | -8.615850e-47 |
| Msa0150300 | Msa0211150 | 0.812799 | 3.533940e-51 | -8.615850e-47 |
| Msa0150300 | Msa0216240 | 0.802394 | 5.727388e-49 | -8.615850e-47 |
| Msa0150300 | Msa0220720 | 0.815902 | 7.284859e-52 | -8.615850e-47 |
| Msa0150300 | Msa0229170 | 0.823696 | 1.205142e-53 | -8.615850e-47 |
| Msa0150300 | Msa0231660 | 0.819633 | 1.048509e-52 | -8.615850e-47 |
| Msa0150300 | Msa0231980 | 0.805426 | 1.342710e-49 | -8.615850e-47 |
| Msa0150300 | Msa0232010 | 0.827180 | 1.803940e-54 | -8.615850e-47 |
| Msa0150300 | Msa0232050 | 0.813531 | 2.442189e-51 | -8.615850e-47 |
| Msa0150300 | Msa0232080 | 0.831035 | 2.096909e-55 | -8.615850e-47 |
| Msa0150300 | Msa0233630 | -0.800570 | 1.354628e-48 | -8.615850e-47 |
| Msa0150300 | Msa0241390 | 0.855471 | 6.170544e-62 | -8.615850e-47 |
| Msa0150300 | Msa0242410 | 0.808839 | 2.542841e-50 | -8.615850e-47 |
| Msa0150300 | Msa0258390 | 0.812910 | 3.341952e-51 | -8.615850e-47 |
| Msa0150300 | Msa0260680 | 0.809230 | 2.096762e-50 | -8.615850e-47 |
| Msa0150300 | Msa0267970 | 0.815005 | 1.153901e-51 | -8.615850e-47 |
| Msa0150300 | Msa0271510 | 0.841099 | 5.833458e-58 | -8.615850e-47 |
| Msa0150300 | Msa0279220 | 0.810672 | 1.025886e-50 | -8.615850e-47 |
| Msa0150300 | Msa0279240 | 0.843515 | 1.336167e-58 | -8.615850e-47 |
| Msa0150300 | Msa0280090 | 0.811934 | 5.461853e-51 | -8.615850e-47 |
| Msa0150300 | Msa0280610 | 0.808681 | 2.748335e-50 | -8.615850e-47 |
| Msa0150300 | Msa0281530 | 0.816167 | 6.357742e-52 | -8.615850e-47 |
| Msa0150300 | Msa0285330 | 0.808293 | 3.325608e-50 | -8.615850e-47 |
| Msa0150300 | Msa0299870 | 0.810722 | 1.000547e-50 | -8.615850e-47 |
| Msa0150300 | Msa0309750 | 0.838554 | 2.684426e-57 | -8.615850e-47 |
| Msa0150300 | Msa0309770 | 0.844941 | 5.534708e-59 | -8.615850e-47 |
| Msa0150300 | Msa0310030 | 0.802277 | 6.056371e-49 | -8.615850e-47 |
| Msa0150300 | Msa0317910 | 0.817814 | 2.713423e-52 | -8.615850e-47 |
| Msa0150300 | Msa0318980 | 0.838695 | 2.467791e-57 | -8.615850e-47 |
| Msa0150300 | Msa0326480 | 0.801914 | 7.191273e-49 | -8.615850e-47 |
| Msa0150300 | Msa0327330 | 0.836758 | 7.756090e-57 | -8.615850e-47 |
| Msa0150300 | Msa0334400 | 0.808270 | 3.362819e-50 | -8.615850e-47 |
| Msa0150300 | Msa0334550 | 0.821457 | 3.997256e-53 | -8.615850e-47 |
| Msa0150300 | Msa0335730 | 0.840501 | 8.372716e-58 | -8.615850e-47 |
| Msa0150300 | Msa0336010 | 0.814701 | 1.347284e-51 | -8.615850e-47 |
| Msa0150300 | Msa0340380 | 0.815731 | 7.954997e-52 | -8.615850e-47 |
| Msa0150300 | Msa0341780 | -0.825554 | 4.400411e-54 | -8.615850e-47 |
| Msa0150300 | Msa0351990 | 0.805249 | 1.462223e-49 | -8.615850e-47 |
| Msa0150300 | Msa0357900 | 0.845213 | 4.673108e-59 | -8.615850e-47 |
| Msa0150300 | Msa0366890 | 0.873673 | 1.225700e-67 | -8.615850e-47 |
| Msa0150300 | Msa0369450 | 0.826982 | 2.011473e-54 | -8.615850e-47 |
| Msa0150300 | Msa0376300 | 0.831155 | 1.959724e-55 | -8.615850e-47 |
| Msa0150300 | Msa0376310 | 0.838776 | 2.352565e-57 | -8.615850e-47 |
| Msa0150300 | Msa0380300 | 0.812597 | 3.914263e-51 | -8.615850e-47 |
| Msa0150300 | Msa0383800 | 0.816437 | 5.533635e-52 | -8.615850e-47 |
| Msa0150300 | Msa0385580 | 0.865899 | 4.224862e-65 | -8.615850e-47 |
| Msa0150300 | Msa0387730 | 0.824192 | 9.219173e-54 | -8.615850e-47 |
| Msa0150300 | Msa0388700 | 0.876011 | 1.958781e-68 | -8.615850e-47 |
| Msa0150300 | Msa0395820 | 0.823657 | 1.230712e-53 | -8.615850e-47 |
| Msa0150300 | Msa0395890 | 0.839983 | 1.142915e-57 | -8.615850e-47 |
| Msa0150300 | Msa0397540 | 0.815776 | 7.772833e-52 | -8.615850e-47 |
| Msa0150300 | Msa0398670 | 0.872180 | 3.875797e-67 | -8.615850e-47 |
| Msa0150300 | Msa0402650 | 0.855544 | 5.875206e-62 | -8.615850e-47 |
| Msa0150300 | Msa0414800 | 0.836436 | 9.370885e-57 | -8.615850e-47 |
| Msa0150300 | Msa0427150 | 0.816250 | 6.091471e-52 | -8.615850e-47 |
| Msa0150300 | Msa0428020 | 0.855813 | 4.902928e-62 | -8.615850e-47 |
| Msa0150300 | Msa0428060 | 0.829157 | 6.022320e-55 | -8.615850e-47 |
| Msa0150300 | Msa0447220 | 0.819164 | 1.341131e-52 | -8.615850e-47 |
| Msa0150300 | Msa0449210 | 0.842368 | 2.699332e-58 | -8.615850e-47 |
| Msa0150300 | Msa0458060 | 0.818438 | 1.960193e-52 | -8.615850e-47 |
| Msa0150300 | Msa0467380 | 0.821220 | 4.533025e-53 | -8.615850e-47 |
| Msa0150300 | Msa0471440 | 0.825286 | 5.092400e-54 | -8.615850e-47 |
| Msa0150300 | Msa0481530 | 0.840074 | 1.082214e-57 | -8.615850e-47 |
| Msa0150300 | Msa0482130 | 0.866074 | 3.720040e-65 | -8.615850e-47 |
| Msa0150300 | Msa0484720 | 0.812741 | 3.638818e-51 | -8.615850e-47 |
| Msa0150300 | Msa0493410 | 0.817322 | 3.501976e-52 | -8.615850e-47 |
| Msa0150300 | Msa0497490 | 0.868931 | 4.524439e-66 | -8.615850e-47 |
| Msa0150300 | Msa0502090 | 0.804124 | 2.510913e-49 | -8.615850e-47 |
| Msa0150300 | Msa0510350 | 0.805255 | 1.457954e-49 | -8.615850e-47 |
| Msa0150300 | Msa0510930 | 0.802929 | 4.443600e-49 | -8.615850e-47 |
| Msa0150300 | Msa0518390 | 0.811468 | 6.896275e-51 | -8.615850e-47 |
| Msa0150300 | Msa0521050 | 0.838935 | 2.140035e-57 | -8.615850e-47 |
| Msa0150300 | Msa0524920 | 0.840428 | 8.747381e-58 | -8.615850e-47 |
| Msa0150300 | Msa0529890 | 0.810937 | 8.992625e-51 | -8.615850e-47 |
| Msa0150300 | Msa0530820 | 0.847548 | 1.078597e-59 | -8.615850e-47 |
| Msa0150300 | Msa0539410 | 0.889867 | 1.648379e-73 | -8.615850e-47 |
| Msa0150300 | Msa0541410 | 0.810216 | 1.287262e-50 | -8.615850e-47 |
| Msa0150300 | Msa0542090 | 0.805775 | 1.134080e-49 | -8.615850e-47 |
| Msa0150300 | Msa0542130 | 0.811298 | 7.508105e-51 | -8.615850e-47 |
| Msa0150300 | Msa0544180 | 0.814893 | 1.221385e-51 | -8.615850e-47 |
| Msa0150300 | Msa0548240 | 0.879122 | 1.611656e-69 | -8.615850e-47 |
| Msa0150300 | Msa0553050 | 0.864130 | 1.517452e-64 | -8.615850e-47 |
| Msa0150300 | Msa0554920 | 0.824568 | 7.522657e-54 | -8.615850e-47 |
| Msa0150300 | Msa0555450 | 0.804966 | 1.676329e-49 | -8.615850e-47 |
| Msa0150300 | Msa0556060 | 0.830385 | 3.025398e-55 | -8.615850e-47 |
| Msa0150300 | Msa0557070 | 0.810712 | 1.005539e-50 | -8.615850e-47 |
| Msa0150300 | Msa0572840 | 0.806241 | 9.050507e-50 | -8.615850e-47 |
| Msa0150300 | Msa0575170 | 0.814446 | 1.534737e-51 | -8.615850e-47 |
| Msa0150300 | Msa0581110 | 0.859557 | 3.809922e-63 | -8.615850e-47 |
| Msa0150300 | Msa0581280 | 0.856162 | 3.875341e-62 | -8.615850e-47 |
| Msa0150300 | Msa0585560 | 0.828428 | 9.040372e-55 | -8.615850e-47 |
| Msa0150300 | Msa0588360 | 0.817885 | 2.614425e-52 | -8.615850e-47 |
| Msa0150300 | Msa0595170 | 0.848352 | 6.475808e-60 | -8.615850e-47 |
| Msa0150300 | Msa0601150 | 0.842178 | 3.030806e-58 | -8.615850e-47 |
| Msa0150300 | Msa0607050 | 0.847996 | 8.121258e-60 | -8.615850e-47 |
| Msa0150300 | Msa0608320 | 0.817616 | 3.007418e-52 | -8.615850e-47 |
| Msa0150300 | Msa0608500 | 0.841889 | 3.613559e-58 | -8.615850e-47 |
| Msa0150300 | Msa0609410 | -0.802608 | 5.175576e-49 | -8.615850e-47 |
| Msa0150300 | Msa0610430 | 0.802007 | 6.882099e-49 | -8.615850e-47 |
| Msa0150300 | Msa0611980 | 0.805540 | 1.270968e-49 | -8.615850e-47 |
| Msa0150300 | Msa0612960 | 0.803195 | 3.914742e-49 | -8.615850e-47 |
| Msa0150300 | Msa0615440 | 0.843444 | 1.395632e-58 | -8.615850e-47 |
| Msa0150300 | Msa0615710 | 0.821943 | 3.085624e-53 | -8.615850e-47 |
| Msa0150300 | Msa0617640 | 0.824383 | 8.317109e-54 | -8.615850e-47 |
| Msa0150300 | Msa0623790 | 0.861359 | 1.084818e-63 | -8.615850e-47 |
| Msa0150300 | Msa0625720 | 0.809100 | 2.235417e-50 | -8.615850e-47 |
| Msa0150300 | Msa0626630 | 0.807963 | 3.909736e-50 | -8.615850e-47 |
| Msa0150300 | Msa0634890 | 0.880568 | 4.930659e-70 | -8.615850e-47 |
| Msa0150300 | Msa0643560 | 0.854301 | 1.348356e-61 | -8.615850e-47 |
| Msa0150300 | Msa0647500 | 0.889177 | 3.059293e-73 | -8.615850e-47 |
| Msa0150300 | Msa0649020 | 0.816112 | 6.540586e-52 | -8.615850e-47 |
| Msa0150300 | Msa0649050 | 0.827731 | 1.330184e-54 | -8.615850e-47 |
| Msa0150300 | Msa0649490 | 0.859490 | 3.991296e-63 | -8.615850e-47 |
| Msa0150300 | Msa0661300 | 0.849826 | 2.520311e-60 | -8.615850e-47 |
| Msa0150300 | Msa0662500 | 0.803682 | 3.102461e-49 | -8.615850e-47 |
| Msa0150300 | Msa0663390 | 0.841898 | 3.593887e-58 | -8.615850e-47 |
| Msa0150300 | Msa0665100 | 0.816167 | 6.356901e-52 | -8.615850e-47 |
| Msa0150300 | Msa0666270 | 0.833813 | 4.297562e-56 | -8.615850e-47 |
| Msa0150300 | Msa0669520 | 0.803745 | 3.010377e-49 | -8.615850e-47 |
| Msa0150300 | Msa0673630 | 0.853469 | 2.340742e-61 | -8.615850e-47 |
| Msa0150300 | Msa0675410 | 0.809330 | 1.995899e-50 | -8.615850e-47 |
| Msa0150300 | Msa0689260 | 0.857265 | 1.835830e-62 | -8.615850e-47 |
| Msa0150300 | Msa0690150 | 0.861280 | 1.146399e-63 | -8.615850e-47 |
| Msa0150300 | Msa0691290 | 0.848619 | 5.462493e-60 | -8.615850e-47 |
| Msa0150300 | Msa0691530 | 0.803240 | 3.830391e-49 | -8.615850e-47 |
| Msa0150300 | Msa0692950 | 0.806676 | 7.326565e-50 | -8.615850e-47 |
| Msa0150300 | Msa0698490 | 0.847093 | 1.437948e-59 | -8.615850e-47 |
| Msa0150300 | Msa0698540 | 0.818131 | 2.300755e-52 | -8.615850e-47 |
| Msa0150300 | Msa0698660 | 0.843921 | 1.040935e-58 | -8.615850e-47 |
| Msa0150300 | Msa0698780 | 0.840922 | 6.494593e-58 | -8.615850e-47 |
| Msa0150300 | Msa0698800 | 0.849669 | 2.787966e-60 | -8.615850e-47 |
| Msa0150300 | Msa0702700 | 0.800794 | 1.219236e-48 | -8.615850e-47 |
| Msa0150300 | Msa0707250 | 0.816409 | 5.614450e-52 | -8.615850e-47 |
| Msa0150300 | Msa0709400 | 0.844244 | 8.523092e-59 | -8.615850e-47 |
| Msa0150300 | Msa0711780 | 0.890798 | 7.114441e-74 | -8.615850e-47 |
| Msa0150300 | Msa0727550 | 0.810658 | 1.033020e-50 | -8.615850e-47 |
| Msa0150300 | Msa0741440 | 0.843683 | 1.205454e-58 | -8.615850e-47 |
| Msa0150300 | Msa0748170 | 0.801452 | 8.944396e-49 | -8.615850e-47 |
| Msa0150300 | Msa0753140 | 0.828449 | 8.935942e-55 | -8.615850e-47 |
| Msa0150300 | Msa0757830 | 0.837940 | 3.862880e-57 | -8.615850e-47 |
| Msa0150300 | Msa0772480 | 0.800711 | 1.267987e-48 | -8.615850e-47 |
| Msa0150300 | Msa0786270 | 0.808772 | 2.628456e-50 | -8.615850e-47 |
| Msa0150300 | Msa0788850 | 0.912286 | 2.317823e-83 | -8.615850e-47 |
| Msa0150300 | Msa0794670 | 0.898809 | 3.687824e-77 | -8.615850e-47 |
| Msa0150300 | Msa0798440 | 0.819613 | 1.059671e-52 | -8.615850e-47 |
| Msa0150300 | Msa0808270 | 0.831266 | 1.840200e-55 | -8.615850e-47 |
| Msa0150300 | Msa0819060 | 0.808246 | 3.403444e-50 | -8.615850e-47 |
| Msa0150300 | Msa0820650 | 0.824662 | 7.147859e-54 | -8.615850e-47 |
| Msa0150300 | Msa0822500 | 0.806634 | 7.477526e-50 | -8.615850e-47 |
| Msa0150300 | Msa0827280 | 0.808860 | 2.516798e-50 | -8.615850e-47 |
| Msa0150300 | Msa0830540 | 0.877406 | 6.448796e-69 | -8.615850e-47 |
| Msa0150300 | Msa0862530 | 0.801799 | 7.592501e-49 | -8.615850e-47 |
| Msa0150300 | Msa0867220 | 0.814544 | 1.460001e-51 | -8.615850e-47 |
| Msa0150300 | Msa0876810 | 0.826983 | 2.010749e-54 | -8.615850e-47 |
| Msa0150300 | Msa0880020 | 0.817073 | 3.984527e-52 | -8.615850e-47 |
| Msa0150300 | Msa0881270 | 0.806924 | 6.494575e-50 | -8.615850e-47 |
| Msa0150300 | Msa0881290 | 0.809826 | 1.561841e-50 | -8.615850e-47 |
| Msa0150300 | Msa0897080 | 0.815632 | 8.370013e-52 | -8.615850e-47 |
| Msa0150300 | Msa0902760 | 0.838720 | 2.432193e-57 | -8.615850e-47 |
| Msa0150300 | Msa0945990 | 0.830490 | 2.851297e-55 | -8.615850e-47 |
| Msa0150300 | Msa0958000 | 0.815741 | 7.912453e-52 | -8.615850e-47 |
| Msa0150300 | Msa0963270 | 0.825237 | 5.230962e-54 | -8.615850e-47 |
| Msa0150300 | Msa0968590 | 0.846166 | 2.575916e-59 | -8.615850e-47 |
| Msa0150300 | Msa0980880 | 0.803605 | 3.218212e-49 | -8.615850e-47 |
| Msa0150300 | Msa0987370 | 0.823879 | 1.092157e-53 | -8.615850e-47 |
| Msa0150300 | Msa0989540 | 0.860730 | 1.685164e-63 | -8.615850e-47 |
| Msa0150300 | Msa1006840 | 0.849877 | 2.439323e-60 | -8.615850e-47 |
| Msa0150300 | Msa1013400 | 0.845319 | 4.373000e-59 | -8.615850e-47 |
| Msa0150300 | Msa1014420 | 0.807551 | 4.782693e-50 | -8.615850e-47 |
| Msa0150300 | Msa1017630 | 0.845864 | 3.113369e-59 | -8.615850e-47 |
| Msa0150300 | Msa1019240 | 0.804105 | 2.533740e-49 | -8.615850e-47 |
| Msa0150300 | Msa1019260 | 0.806639 | 7.459236e-50 | -8.615850e-47 |
| Msa0150300 | Msa1021470 | 0.803747 | 3.007296e-49 | -8.615850e-47 |
| Msa0150300 | Msa1021520 | 0.808574 | 2.896997e-50 | -8.615850e-47 |
| Msa0150300 | Msa1026740 | 0.804493 | 2.103885e-49 | -8.615850e-47 |
| Msa0150300 | Msa1041210 | 0.806231 | 9.093765e-50 | -8.615850e-47 |
| Msa0150300 | Msa1041850 | 0.810772 | 9.763281e-51 | -8.615850e-47 |
| Msa0150300 | Msa1043690 | 0.856191 | 3.800067e-62 | -8.615850e-47 |
| Msa0150300 | Msa1051880 | 0.867746 | 1.090557e-65 | -8.615850e-47 |
| Msa0150300 | Msa1055410 | 0.805971 | 1.031728e-49 | -8.615850e-47 |
| Msa0150300 | Msa1070720 | 0.802159 | 6.402017e-49 | -8.615850e-47 |
| Msa0150300 | Msa1078170 | 0.801767 | 7.710170e-49 | -8.615850e-47 |
| Msa0150300 | Msa1081150 | 0.840473 | 8.512793e-58 | -8.615850e-47 |
| Msa0150300 | Msa1081930 | 0.870277 | 1.647574e-66 | -8.615850e-47 |
| Msa0150300 | Msa1081980 | 0.855089 | 7.968490e-62 | -8.615850e-47 |
| Msa0150300 | Msa1089320 | 0.803319 | 3.688842e-49 | -8.615850e-47 |
| Msa0150300 | Msa1091940 | 0.801149 | 1.031818e-48 | -8.615850e-47 |
| Msa0150300 | Msa1093530 | 0.839618 | 1.422961e-57 | -8.615850e-47 |
| Msa0150300 | Msa1104140 | 0.855310 | 6.874998e-62 | -8.615850e-47 |
| Msa0150300 | Msa1104210 | 0.803541 | 3.318596e-49 | -8.615850e-47 |
| Msa0150300 | Msa1106700 | 0.801702 | 7.947802e-49 | -8.615850e-47 |
| Msa0150300 | Msa1109680 | 0.836163 | 1.099299e-56 | -8.615850e-47 |
| Msa0150300 | Msa1121440 | 0.845497 | 3.913978e-59 | -8.615850e-47 |
| Msa0150300 | Msa1124960 | 0.832748 | 7.919587e-56 | -8.615850e-47 |
| Msa0150300 | Msa1126830 | 0.857539 | 1.523612e-62 | -8.615850e-47 |
| Msa0150300 | Msa1128600 | 0.818993 | 1.466297e-52 | -8.615850e-47 |
| Msa0150300 | Msa1130980 | 0.826286 | 2.948786e-54 | -8.615850e-47 |
| Msa0150300 | Msa1147970 | 0.803078 | 4.138049e-49 | -8.615850e-47 |
| Msa0150300 | Msa1148910 | 0.833373 | 5.537099e-56 | -8.615850e-47 |
| Msa0150300 | Msa1160590 | 0.882477 | 1.007859e-70 | -8.615850e-47 |
| Msa0150300 | Msa1162270 | 0.813507 | 2.471500e-51 | -8.615850e-47 |
| Msa0150300 | Msa1165780 | 0.814691 | 1.354225e-51 | -8.615850e-47 |
| Msa0150300 | Msa1165920 | 0.847109 | 1.423167e-59 | -8.615850e-47 |
| Msa0150300 | Msa1165940 | 0.902267 | 1.153900e-78 | -8.615850e-47 |
| Msa0150300 | Msa1167340 | 0.809702 | 1.660269e-50 | -8.615850e-47 |
| Msa0150300 | Msa1170410 | 0.800663 | 1.296626e-48 | -8.615850e-47 |
| Msa0150300 | Msa1181250 | 0.847863 | 8.834230e-60 | -8.615850e-47 |
| Msa0150300 | Msa1181330 | 0.837949 | 3.842772e-57 | -8.615850e-47 |
| Msa0150300 | Msa1181910 | 0.824206 | 9.150345e-54 | -8.615850e-47 |
| Msa0150300 | Msa1206670 | 0.809825 | 1.562816e-50 | -8.615850e-47 |
| Msa0150300 | Msa1207270 | 0.809362 | 1.964860e-50 | -8.615850e-47 |
| Msa0150300 | Msa1208880 | 0.831744 | 1.403557e-55 | -8.615850e-47 |
| Msa0150300 | Msa1209200 | 0.875559 | 2.801017e-68 | -8.615850e-47 |
| Msa0150300 | Msa1209260 | 0.855208 | 7.362233e-62 | -8.615850e-47 |
| Msa0150300 | Msa1209760 | 0.838620 | 2.580478e-57 | -8.615850e-47 |
| Msa0150300 | Msa1211890 | 0.809292 | 2.033903e-50 | -8.615850e-47 |
| Msa0150300 | Msa1218600 | 0.838360 | 3.011959e-57 | -8.615850e-47 |
| Msa0150300 | Msa1237630 | 0.804170 | 2.456922e-49 | -8.615850e-47 |
| Msa0150300 | Msa1243740 | -0.815495 | 8.980325e-52 | -8.615850e-47 |
| Msa0150300 | Msa1244600 | 0.835382 | 1.733280e-56 | -8.615850e-47 |
| Msa0150300 | Msa1245930 | 0.824505 | 7.784825e-54 | -8.615850e-47 |
| Msa0150300 | Msa1254730 | 0.811181 | 7.961973e-51 | -8.615850e-47 |
| Msa0150300 | Msa1257510 | 0.828774 | 7.456747e-55 | -8.615850e-47 |
| Msa0150300 | Msa1259060 | 0.826551 | 2.549116e-54 | -8.615850e-47 |
| Msa0150300 | Msa1265630 | 0.854396 | 1.265778e-61 | -8.615850e-47 |
| Msa0150300 | Msa1267430 | 0.822493 | 2.299623e-53 | -8.615850e-47 |
| Msa0150300 | Msa1279400 | 0.804206 | 2.414194e-49 | -8.615850e-47 |
| Msa0150300 | Msa1294120 | 0.870444 | 1.452561e-66 | -8.615850e-47 |
| Msa0150300 | Msa1294820 | 0.834522 | 2.854670e-56 | -8.615850e-47 |
| Msa0150300 | Msa1302380 | 0.803258 | 3.797834e-49 | -8.615850e-47 |
| Msa0150300 | Msa1305660 | 0.842431 | 2.597539e-58 | -8.615850e-47 |
| Msa0150300 | Msa1315750 | 0.804949 | 1.689594e-49 | -8.615850e-47 |
| Msa0150300 | Msa1328710 | 0.801573 | 8.449962e-49 | -8.615850e-47 |
| Msa0150300 | Msa1331320 | 0.803503 | 3.379002e-49 | -8.615850e-47 |
| Msa0150300 | Msa1332590 | 0.832116 | 1.135795e-55 | -8.615850e-47 |
| Msa0150300 | Msa1332760 | 0.810534 | 1.099172e-50 | -8.615850e-47 |
| Msa0150300 | Msa1341060 | 0.828767 | 7.487299e-55 | -8.615850e-47 |
| Msa0150300 | Msa1347760 | 0.811256 | 7.669488e-51 | -8.615850e-47 |
| Msa0150300 | Msa1353980 | 0.830732 | 2.488974e-55 | -8.615850e-47 |
| Msa0150300 | Msa1358250 | 0.860413 | 2.102282e-63 | -8.615850e-47 |
| Msa0150300 | Msa1360440 | 0.808913 | 2.451999e-50 | -8.615850e-47 |
| Msa0150300 | Msa1361100 | 0.813180 | 2.915618e-51 | -8.615850e-47 |
| Msa0150300 | Msa1364210 | 0.800022 | 1.751203e-48 | -8.615850e-47 |
| Msa0150300 | Msa1366600 | 0.814950 | 1.186878e-51 | -8.615850e-47 |
| Msa0150300 | Msa1367590 | 0.800500 | 1.400218e-48 | -8.615850e-47 |
| Msa0150300 | Msa1370070 | -0.811973 | 5.354756e-51 | -8.615850e-47 |
| Msa0150300 | Msa1374060 | 0.800632 | 1.315786e-48 | -8.615850e-47 |
| Msa0150300 | Msa1374120 | 0.880435 | 5.503989e-70 | -8.615850e-47 |
| Msa0150300 | Msa1375560 | 0.803910 | 2.782467e-49 | -8.615850e-47 |
| Msa0150300 | Msa1379760 | 0.804724 | 1.883137e-49 | -8.615850e-47 |
| Msa0150300 | Msa1382560 | 0.823880 | 1.091545e-53 | -8.615850e-47 |
| Msa0150300 | Msa1382620 | 0.850598 | 1.530918e-60 | -8.615850e-47 |
| Msa0150300 | Msa1384880 | 0.821600 | 3.703361e-53 | -8.615850e-47 |
| Msa0150300 | Msa1386780 | 0.825219 | 5.281878e-54 | -8.615850e-47 |
| Msa0150300 | Msa1389510 | 0.801903 | 7.229933e-49 | -8.615850e-47 |
| Msa0150300 | Msa1391410 | 0.845044 | 5.190543e-59 | -8.615850e-47 |
| Msa0150300 | Msa1392780 | 0.851941 | 6.390095e-61 | -8.615850e-47 |
| Msa0150300 | Msa1393570 | 0.813215 | 2.865210e-51 | -8.615850e-47 |
| Msa0150300 | Msa1394290 | 0.887393 | 1.484224e-72 | -8.615850e-47 |
| Msa0150300 | Msa1399530 | 0.850451 | 1.684028e-60 | -8.615850e-47 |
| Msa0150300 | Msa1400580 | 0.826102 | 3.260497e-54 | -8.615850e-47 |
| Msa0150300 | Msa1402420 | -0.805815 | 1.112386e-49 | -8.615850e-47 |
| Msa0150300 | Msa1407460 | 0.812077 | 5.083107e-51 | -8.615850e-47 |
| Msa0150300 | Msa1418340 | 0.823058 | 1.699406e-53 | -8.615850e-47 |
| Msa0150300 | Msa1419870 | 0.872899 | 2.229904e-67 | -8.615850e-47 |
| Msa0150300 | Msa1428880 | 0.856404 | 3.290927e-62 | -8.615850e-47 |
| Msa0150300 | Msa1432420 | 0.893582 | 5.497263e-75 | -8.615850e-47 |
| Msa0150300 | Msa1432700 | 0.801900 | 7.237086e-49 | -8.615850e-47 |
| Msa0150300 | Msa1433390 | 0.851053 | 1.140090e-60 | -8.615850e-47 |
| Msa0150300 | Msa1435390 | 0.802943 | 4.413613e-49 | -8.615850e-47 |
| Msa0150300 | Msa1436520 | 0.812678 | 3.756141e-51 | -8.615850e-47 |
| Msa0150300 | Msa1437860 | 0.827509 | 1.504651e-54 | -8.615850e-47 |
| Msa0150300 | Msa1439550 | 0.845132 | 4.913546e-59 | -8.615850e-47 |
| Msa0150300 | Msa1451160 | 0.817390 | 3.380214e-52 | -8.615850e-47 |
| Msa0150300 | Msa1451560 | 0.823367 | 1.438895e-53 | -8.615850e-47 |
| Msa0150300 | Msa1454480 | 0.806148 | 9.466582e-50 | -8.615850e-47 |
| Msa0150300 | Msa1456050 | 0.808031 | 3.781587e-50 | -8.615850e-47 |
| Msa0150300 | Msa1457920 | 0.880409 | 5.623430e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0150300 | MtrunA17_Chr1g0157741 | 97.510 | 482 | 3 | 1 | 1 | 473 | 1 | 482 | 0.0 | 943 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0150300 | AT4G32720.2 | 51.204 | 457 | 157 | 9 | 1 | 445 | 1 | 403 | 3.05e-143 | 416 |
| Msa0150300 | AT4G32720.1 | 51.810 | 442 | 152 | 8 | 1 | 430 | 1 | 393 | 2.53e-141 | 412 |
| Msa0150300 | AT1G79880.1 | 42.217 | 424 | 181 | 11 | 5 | 427 | 4 | 364 | 4.22e-96 | 296 |
| Msa0150300 | AT1G79880.2 | 39.142 | 373 | 163 | 11 | 56 | 427 | 1 | 310 | 1.58e-69 | 225 |
| Msa0150300 | AT1G79880.3 | 38.701 | 385 | 167 | 12 | 56 | 434 | 1 | 322 | 2.77e-69 | 225 |
| Msa0150300 | AT2G43970.2 | 29.452 | 146 | 88 | 2 | 2 | 147 | 185 | 315 | 3.65e-12 | 68.9 |
| Msa0150300 | AT5G46250.1 | 27.074 | 229 | 123 | 9 | 8 | 209 | 101 | 312 | 3.73e-12 | 68.6 |
| Msa0150300 | AT2G43970.1 | 29.452 | 146 | 88 | 2 | 2 | 147 | 185 | 315 | 4.35e-12 | 68.6 |
| Msa0150300 | AT5G46250.2 | 29.940 | 167 | 92 | 5 | 8 | 166 | 101 | 250 | 7.09e-12 | 67.0 |
| Msa0150300 | AT5G46250.3 | 29.940 | 167 | 92 | 5 | 8 | 166 | 101 | 250 | 7.98e-12 | 67.0 |
Find 104 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACTTTCTATATTTATTT+TGG | 0.150399 | 1_4:+11557983 | None:intergenic |
| AAAGAGAGAGTGTAGGGTTT+TGG | 0.250659 | 1_4:+11563418 | None:intergenic |
| AGAAAGTATTAACTGCATTC+AGG | 0.264212 | 1_4:-11557970 | Msa0150300:exon |
| CGAGCTTTCTGAGCAGCTTC+AGG | 0.267686 | 1_4:+11558582 | None:intergenic |
| AAGGCTATAACTAAGCCTTT+AGG | 0.286449 | 1_4:+11559357 | None:intergenic |
| GCCGAAAAGGGCCAGGAAAC+TGG | 0.288268 | 1_4:-11559054 | Msa0150300:CDS |
| TTTATAAGCAAATGTTAGTT+TGG | 0.293108 | 1_4:-11557740 | Msa0150300:three_prime_UTR |
| ACCTGCTCAATTACCTCTTC+TGG | 0.299485 | 1_4:+11560614 | None:intergenic |
| AACCTGTCGTATAACCTTCT+TGG | 0.309750 | 1_4:+11563311 | None:intergenic |
| CTCAATTACCTCTTCTGGCT+TGG | 0.321742 | 1_4:+11560619 | None:intergenic |
| AGGCTATAACTAAGCCTTTA+GGG | 0.335538 | 1_4:+11559358 | None:intergenic |
| TCGTGCTGCTGCAGCCCTTT+CGG | 0.337640 | 1_4:-11558562 | Msa0150300:CDS |
| AAGGTTGTGTTTCAGAAGTT+TGG | 0.339229 | 1_4:-11558973 | Msa0150300:CDS |
| TGCTGCAGCCCTTTCGGAAA+AGG | 0.341335 | 1_4:-11558556 | Msa0150300:CDS |
| CGTAATAGAGACAATGATTC+TGG | 0.344136 | 1_4:-11558015 | Msa0150300:CDS |
| AAGTAAAACTAACCGGTAAC+TGG | 0.344730 | 1_4:+11558495 | None:intergenic |
| CTTTGCTTTGTTCCTTCAAT+CGG | 0.350383 | 1_4:-11561603 | Msa0150300:CDS |
| TAACTACACAGTGGTTAGTT+TGG | 0.362858 | 1_4:-11561626 | Msa0150300:intron |
| GCTGCAGCCCTTTCGGAAAA+GGG | 0.363306 | 1_4:-11558555 | Msa0150300:CDS |
| TGAACTGCTCTTTAGTTTGA+AGG | 0.365442 | 1_4:+11559338 | None:intergenic |
| ACAGTACATAGATTTCAATA+TGG | 0.376267 | 1_4:-11558637 | Msa0150300:intron |
| TCAATTACCTCTTCTGGCTT+GGG | 0.381807 | 1_4:+11560620 | None:intergenic |
| AAAGAGATTTAGGTTGTGTT+TGG | 0.402101 | 1_4:+11563441 | None:intergenic |
| TGCGTGCCACTTACCTTCCT+CGG | 0.406995 | 1_4:+11558171 | None:intergenic |
| CTGGTTTAGTAGCTGCTTCA+AGG | 0.408785 | 1_4:-11557934 | Msa0150300:three_prime_UTR |
| TACTAAGCCCGCTGATGTTA+AGG | 0.409561 | 1_4:-11561551 | Msa0150300:CDS |
| TTCAATATGGGAGATGAGTC+AGG | 0.414927 | 1_4:-11558624 | Msa0150300:CDS |
| AGAAGAGCCAAGAAAACAAT+GGG | 0.421708 | 1_4:-11559104 | Msa0150300:CDS |
| GGAGGCTGAAGGCGAAGAAA+AGG | 0.425040 | 1_4:-11559175 | Msa0150300:CDS |
| GAAAGTATTAACTGCATTCA+GGG | 0.425236 | 1_4:-11557969 | Msa0150300:exon |
| CGGGCGCTGAGCTAGAATTA+AGG | 0.430112 | 1_4:-11559967 | Msa0150300:CDS |
| ATGCTTTCGCATCCGATTGA+AGG | 0.433367 | 1_4:+11561591 | None:intergenic |
| GAAGAAGTGGAGTCCTTCTT+CGG | 0.441428 | 1_4:-11560542 | Msa0150300:CDS |
| GATTTCAGGTCAACAGTGTT+CGG | 0.445081 | 1_4:-11560096 | Msa0150300:intron |
| GCTACTCTAGATCCAGTTAC+CGG | 0.447734 | 1_4:-11558507 | Msa0150300:intron |
| CTTGGCATATTGACCGAAGA+AGG | 0.449259 | 1_4:+11560529 | None:intergenic |
| AAAGAGAAAGAGAGAGTGTA+GGG | 0.449605 | 1_4:+11563412 | None:intergenic |
| AAATGGGGTGAAGGAAGAAA+AGG | 0.452338 | 1_4:-11559142 | Msa0150300:CDS |
| GGAGGAGGAAGGTATGGTAG+AGG | 0.458576 | 1_4:-11558051 | Msa0150300:CDS |
| TGCATTCCAGGGAGCAAAGT+TGG | 0.464023 | 1_4:-11560659 | Msa0150300:intron |
| TACTGTGAAGCTTGAAGAAG+TGG | 0.465343 | 1_4:-11560555 | Msa0150300:CDS |
| GAAATTAGAGAGTGGCGGTA+TGG | 0.479890 | 1_4:+11563384 | None:intergenic |
| GGTGACTGAAGGTGCCGAAA+AGG | 0.481831 | 1_4:-11559067 | Msa0150300:CDS |
| TATCTTGTTTACCACGAAGC+TGG | 0.484324 | 1_4:+11558216 | None:intergenic |
| AAGTAGCTGAGAACAAAATC+AGG | 0.485526 | 1_4:+11557907 | None:intergenic |
| AGCTTCACAGTATATTCAAA+TGG | 0.487645 | 1_4:+11560566 | None:intergenic |
| GAAAGAGAAAGAGAGAGTGT+AGG | 0.487659 | 1_4:+11563411 | None:intergenic |
| CAGTACATAGATTTCAATAT+GGG | 0.489907 | 1_4:-11558636 | Msa0150300:CDS |
| TTTGCTCAAGAAATCATCCC+TGG | 0.490461 | 1_4:+11563175 | None:intergenic |
| TGTGTTATCCTCCTCGTGGT+TGG | 0.492162 | 1_4:+11559480 | None:intergenic |
| TTCAGGGGAGGAGGAAGGTA+TGG | 0.496516 | 1_4:-11558057 | Msa0150300:intron |
| CTGCAGCCCTTTCGGAAAAG+GGG | 0.498607 | 1_4:-11558554 | Msa0150300:CDS |
| TTCCAGGGAGCAAAGTTGGC+AGG | 0.499364 | 1_4:-11560655 | Msa0150300:intron |
| TGTCTTACGTGAAGATTTGA+AGG | 0.499878 | 1_4:-11558992 | Msa0150300:CDS |
| AAATTAGAGAGTGGCGGTAT+GGG | 0.505052 | 1_4:+11563385 | None:intergenic |
| GCCAGAAGAGGTAATTGAGC+AGG | 0.508078 | 1_4:-11560615 | Msa0150300:CDS |
| ACTGTCAATGAAAGTGAAGA+TGG | 0.510540 | 1_4:-11563152 | Msa0150300:CDS |
| TGAAGGTGCCGAAAAGGGCC+AGG | 0.512350 | 1_4:-11559061 | Msa0150300:CDS |
| CCGAAAAGGGCCAGGAAACT+GGG | 0.514402 | 1_4:-11559053 | Msa0150300:CDS |
| TATTGTTACAGCTACCCTAA+AGG | 0.518011 | 1_4:-11559372 | Msa0150300:intron |
| GTTTCTTCCTTAACATCAGC+GGG | 0.518351 | 1_4:+11561544 | None:intergenic |
| GTGACTGAAGGTGCCGAAAA+GGG | 0.521308 | 1_4:-11559066 | Msa0150300:CDS |
| GTTCGGTTGCCCCGTCATGT+TGG | 0.521804 | 1_4:-11560079 | Msa0150300:CDS |
| TGCAGCCCTTTCGGAAAAGG+GGG | 0.524299 | 1_4:-11558553 | Msa0150300:CDS |
| TCCTCAGCAGCAACTTCAGA+GGG | 0.526503 | 1_4:+11559264 | None:intergenic |
| AGCCAAGAAAACAATGGGGC+AGG | 0.526829 | 1_4:-11559099 | Msa0150300:CDS |
| CAATACTGGAGCCAGCTTCG+TGG | 0.527832 | 1_4:-11558227 | Msa0150300:CDS |
| TCAGTGATAGTAATCTTCCC+AGG | 0.528131 | 1_4:-11563193 | Msa0150300:CDS |
| ACCCTCTGAAGTTGCTGCTG+AGG | 0.528326 | 1_4:-11559265 | Msa0150300:CDS |
| GGAGGAAGGTATGGTAGAGG+AGG | 0.530321 | 1_4:-11558048 | Msa0150300:CDS |
| GAAAACAATGGGGCAGGTGA+AGG | 0.536070 | 1_4:-11559093 | Msa0150300:CDS |
| TTCAGGGTTATTTACAACAC+TGG | 0.539199 | 1_4:-11557953 | Msa0150300:three_prime_UTR |
| TGGTTTAGTAGCTGCTTCAA+GGG | 0.539915 | 1_4:-11557933 | Msa0150300:three_prime_UTR |
| GAGATGAGTCAGGATTCATT+CGG | 0.541514 | 1_4:-11558614 | Msa0150300:CDS |
| AACCAAGAAGGTTATACGAC+AGG | 0.543197 | 1_4:-11563313 | Msa0150300:intron |
| TCACTCAAGCTATCAGAAGA+TGG | 0.556963 | 1_4:-11561484 | Msa0150300:intron |
| TAGTTTGGTATATTGTGAGT+AGG | 0.559888 | 1_4:-11557725 | Msa0150300:three_prime_UTR |
| GATGCGAAAGCATCTTAAGT+TGG | 0.561750 | 1_4:-11561581 | Msa0150300:CDS |
| CAATGGGGCAGGTGAAGGAA+AGG | 0.574806 | 1_4:-11559088 | Msa0150300:CDS |
| TTCCTCAGCAGCAACTTCAG+AGG | 0.588125 | 1_4:+11559263 | None:intergenic |
| CATCTGATGAGAACTCAACA+AGG | 0.591422 | 1_4:+11560029 | None:intergenic |
| GAGAAGAGCCAAGAAAACAA+TGG | 0.592496 | 1_4:-11559105 | Msa0150300:CDS |
| CAATGGAGTGAACGAAGGAA+AGG | 0.592633 | 1_4:-11559196 | Msa0150300:CDS |
| TCAGAAGTTTGGTGATGTGA+AGG | 0.592670 | 1_4:-11558962 | Msa0150300:intron |
| CAGTGATAGTAATCTTCCCA+GGG | 0.596203 | 1_4:-11563192 | Msa0150300:CDS |
| GCAGCCCTTTCGGAAAAGGG+GGG | 0.596520 | 1_4:-11558552 | Msa0150300:CDS |
| TGACGAAGAAACAACCAAGA+AGG | 0.607861 | 1_4:-11563325 | Msa0150300:CDS |
| TTGCTCAAGAAATCATCCCT+GGG | 0.608198 | 1_4:+11563176 | None:intergenic |
| TGAACTTCCCAAGCCAGAAG+AGG | 0.608914 | 1_4:-11560627 | Msa0150300:CDS |
| AGAGACAATGATTCTGGACG+AGG | 0.611973 | 1_4:-11558009 | Msa0150300:CDS |
| GACAATGATAAAGAAAACAA+TGG | 0.616572 | 1_4:-11559213 | Msa0150300:CDS |
| GGTGAAGGAAAGGTGACTGA+AGG | 0.628219 | 1_4:-11559078 | Msa0150300:CDS |
| AGTTTCTTCCTTAACATCAG+CGG | 0.630747 | 1_4:+11561543 | None:intergenic |
| CTTCTTCGGTCAATATGCCA+AGG | 0.638433 | 1_4:-11560528 | Msa0150300:intron |
| AGAAAACTGAAATTAGAGAG+TGG | 0.639196 | 1_4:+11563376 | None:intergenic |
| AACGAAGGAAAGGAGGCTGA+AGG | 0.639810 | 1_4:-11559186 | Msa0150300:CDS |
| TGGAGTGAACGAAGGAAAGG+AGG | 0.640717 | 1_4:-11559193 | Msa0150300:CDS |
| TATTTGTGTTATCCTCCTCG+TGG | 0.654110 | 1_4:+11559476 | None:intergenic |
| GAAAACAATGGAGTGAACGA+AGG | 0.669742 | 1_4:-11559201 | Msa0150300:CDS |
| ATCTGATGAGAACTCAACAA+GGG | 0.670020 | 1_4:+11560030 | None:intergenic |
| AAACTGAAATTAGAGAGTGG+CGG | 0.703278 | 1_4:+11563379 | None:intergenic |
| GAATGTGGGTTCCAACCACG+AGG | 0.704964 | 1_4:-11559491 | Msa0150300:CDS |
| TGTGGGTTCCAACCACGAGG+AGG | 0.705081 | 1_4:-11559488 | Msa0150300:CDS |
| GAAGAGCCAAGAAAACAATG+GGG | 0.727730 | 1_4:-11559103 | Msa0150300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAAAAAAAAAATT+AGG | + | chr1_4:11557933-11557952 | None:intergenic | 0.0% |
| !! | TTTATTTAACAAAAATAGTT+TGG | - | chr1_4:11560978-11560997 | Msa0150300:intron | 10.0% |
| !!! | AAATTGAAGTTTTTTATAAA+GGG | + | chr1_4:11561488-11561507 | None:intergenic | 10.0% |
| !!! | TTGTCTTTTTTTTATTTATT+TGG | - | chr1_4:11562325-11562344 | Msa0150300:intron | 10.0% |
| !!! | AATACTTTCTATATTTATTT+TGG | + | chr1_4:11563186-11563205 | None:intergenic | 10.0% |
| !!! | AGTTATTTTTGAATTAATTT+TGG | - | chr1_4:11563370-11563389 | Msa0150300:five_prime_UTR | 10.0% |
| !!! | TTTTTTTTTTTTTAAACTGC+AGG | - | chr1_4:11557938-11557957 | Msa0150300:three_prime_UTR | 15.0% |
| !!! | GTTTATATTTTTAATGATGA+AGG | - | chr1_4:11560042-11560061 | Msa0150300:CDS | 15.0% |
| !! | TGTATATTCATTAAATTTCT+TGG | - | chr1_4:11560849-11560868 | Msa0150300:intron | 15.0% |
| !! | TAATATATGTATTTGTCAAA+TGG | + | chr1_4:11561376-11561395 | None:intergenic | 15.0% |
| !! | TATTAAAAAACTGTAATTGA+TGG | - | chr1_4:11561423-11561442 | Msa0150300:intron | 15.0% |
| !!! | GAAATTGAAGTTTTTTATAA+AGG | + | chr1_4:11561489-11561508 | None:intergenic | 15.0% |
| !!! | TTTTTAGTTAAGTTTCAATT+TGG | - | chr1_4:11563312-11563331 | Msa0150300:intron | 15.0% |
| !!! | TCAATTTGGTTTATGTTTTT+AGG | - | chr1_4:11558072-11558091 | Msa0150300:intron | 20.0% |
| !!! | CAATTTGGTTTATGTTTTTA+GGG | - | chr1_4:11558073-11558092 | Msa0150300:intron | 20.0% |
| !!! | CTTCAATTTTCTTAAATGAT+CGG | + | chr1_4:11558177-11558196 | None:intergenic | 20.0% |
| !! | ATTTAAGAAAATTGAAGTAC+CGG | - | chr1_4:11558180-11558199 | Msa0150300:intron | 20.0% |
| !!! | GAAGAAAATAAACTGATTTT+AGG | + | chr1_4:11558791-11558810 | None:intergenic | 20.0% |
| !! | GTTAATACCAATAAAAAGTA+GGG | - | chr1_4:11558853-11558872 | Msa0150300:intron | 20.0% |
| !!! | ATATTTTCTCAAATTACTGT+CGG | - | chr1_4:11559213-11559232 | Msa0150300:CDS | 20.0% |
| !! | AACAGCATAATCTAAATTAA+TGG | + | chr1_4:11560121-11560140 | None:intergenic | 20.0% |
| !!! | ATTAATTTAGAGTTAATCGA+AGG | + | chr1_4:11560210-11560229 | None:intergenic | 20.0% |
| !! | TAGATATAAATTTCATGTAG+TGG | + | chr1_4:11560236-11560255 | None:intergenic | 20.0% |
| !! | AATGAAATTTATATCTATCG+TGG | + | chr1_4:11560275-11560294 | None:intergenic | 20.0% |
| !!! | TTAGTGAATCATTAATTTTC+TGG | - | chr1_4:11560294-11560313 | Msa0150300:intron | 20.0% |
| !! | GAAATAAGTAATAAGTTATG+TGG | + | chr1_4:11560473-11560492 | None:intergenic | 20.0% |
| !!! | AGATTTCTTTAAGATAAATC+TGG | - | chr1_4:11560911-11560930 | Msa0150300:intron | 20.0% |
| !!! | ACATTTTTGTTTTTGATTTC+AGG | - | chr1_4:11561056-11561075 | Msa0150300:intron | 20.0% |
| !!! | ATTACTTTGCTTTCATTTTA+TGG | + | chr1_4:11561762-11561781 | None:intergenic | 20.0% |
| !! | ATAGATAAATATCAAACCAA+AGG | + | chr1_4:11562272-11562291 | None:intergenic | 20.0% |
| !! | AAAAATAGAGAAAATCATCA+AGG | + | chr1_4:11563033-11563052 | None:intergenic | 20.0% |
| !!! | TGATGATTTTCTCTATTTTT+TGG | - | chr1_4:11563033-11563052 | Msa0150300:intron | 20.0% |
| !!! | GATGATTTTCTCTATTTTTT+GGG | - | chr1_4:11563034-11563053 | Msa0150300:intron | 20.0% |
| !!! | AATTACATTTATACCTTTTC+AGG | - | chr1_4:11563092-11563111 | Msa0150300:intron | 20.0% |
| !!! | ATTACATTTATACCTTTTCA+GGG | - | chr1_4:11563093-11563112 | Msa0150300:intron | 20.0% |
| !! | TTTATAAGCAAATGTTAGTT+TGG | - | chr1_4:11563426-11563445 | Msa0150300:five_prime_UTR | 20.0% |
| ! | GAATAATTAAGCAAAAACGA+CGG | + | chr1_4:11557886-11557905 | None:intergenic | 25.0% |
| ! | CCAAATTGATAAACAAAAGA+GGG | + | chr1_4:11558061-11558080 | None:intergenic | 25.0% |
| ! | ACCAAATTGATAAACAAAAG+AGG | + | chr1_4:11558062-11558081 | None:intergenic | 25.0% |
| !!! | GGTTTTGTTAATGTAATTGA+AGG | - | chr1_4:11558094-11558113 | Msa0150300:intron | 25.0% |
| !!! | GTTACATTTGTTGTTGTTTT+TGG | - | chr1_4:11558514-11558533 | Msa0150300:CDS | 25.0% |
| !!! | ATTTGTTGTTGTTTTTGGAA+TGG | - | chr1_4:11558519-11558538 | Msa0150300:CDS | 25.0% |
| !!! | TTTGTTGTTGTTTTTGGAAT+GGG | - | chr1_4:11558520-11558539 | Msa0150300:CDS | 25.0% |
| !!! | CCATTCAATTCAATTTTAGT+GGG | - | chr1_4:11558579-11558598 | Msa0150300:CDS | 25.0% |
| ! | GAGACTTATTAATTAAATGG+TGG | + | chr1_4:11558659-11558678 | None:intergenic | 25.0% |
| ! | CGTTAATACCAATAAAAAGT+AGG | - | chr1_4:11558852-11558871 | Msa0150300:intron | 25.0% |
| !! | ATTTTCCCTAGTTTACATTT+TGG | + | chr1_4:11559445-11559464 | None:intergenic | 25.0% |
| ! | TTGATCAAATGAGAAGAAAT+TGG | + | chr1_4:11559475-11559494 | None:intergenic | 25.0% |
| ! | AACGAAAACAAAAACATGTT+TGG | + | chr1_4:11559500-11559519 | None:intergenic | 25.0% |
| ! | TACAACAATCATACACAAAA+TGG | + | chr1_4:11559738-11559757 | None:intergenic | 25.0% |
| ! | GTGATAAATTCATTCTAATC+AGG | - | chr1_4:11559767-11559786 | Msa0150300:intron | 25.0% |
| ! | CAATCTATCCTATTCTTAAT+TGG | + | chr1_4:11559899-11559918 | None:intergenic | 25.0% |
| !! | TAATTTAAAGTTAGCGATAG+TGG | - | chr1_4:11559929-11559948 | Msa0150300:intron | 25.0% |
| ! | AACTCTAAATTAACGATAGA+TGG | - | chr1_4:11560095-11560114 | Msa0150300:intron | 25.0% |
| ! | ATTTAGATTATGCTGTTGTA+TGG | - | chr1_4:11560124-11560143 | Msa0150300:intron | 25.0% |
| ! | ATTTATGTTGTTCTGTTGTA+TGG | - | chr1_4:11560156-11560175 | Msa0150300:intron | 25.0% |
| !! | TCACTTGAAATTTTGTTCAT+TGG | - | chr1_4:11560369-11560388 | Msa0150300:intron | 25.0% |
| !! | CACTTGAAATTTTGTTCATT+GGG | - | chr1_4:11560370-11560389 | Msa0150300:intron | 25.0% |
| ! | CATTGATGTTAATATTACCT+TGG | + | chr1_4:11560658-11560677 | None:intergenic | 25.0% |
| ! | ATATATTAACATTAATGCCG+TGG | - | chr1_4:11560701-11560720 | Msa0150300:intron | 25.0% |
| ! | ATATATTAACATTAATGCCG+TGG | - | chr1_4:11560701-11560720 | Msa0150300:intron | 25.0% |
| ! | CATTCTAACAGTATTATAGT+CGG | - | chr1_4:11560728-11560747 | Msa0150300:intron | 25.0% |
| !! | ATACATAAAGCATCATTACT+CGG | + | chr1_4:11560834-11560853 | None:intergenic | 25.0% |
| ! | AAACCTTCAAATATTAACCA+CGG | + | chr1_4:11560947-11560966 | None:intergenic | 25.0% |
| !!! | TGGATTTTGACAGAAAATAT+TGG | + | chr1_4:11561356-11561375 | None:intergenic | 25.0% |
| ! | TGTATATATTTACTCAATGC+AGG | - | chr1_4:11561596-11561615 | Msa0150300:CDS | 25.0% |
| !! | TTGCTTTCATTTTATGGTTA+GGG | + | chr1_4:11561756-11561775 | None:intergenic | 25.0% |
| !! | TTTGCTTTCATTTTATGGTT+AGG | + | chr1_4:11561757-11561776 | None:intergenic | 25.0% |
| ! | GACAATGATAAAGAAAACAA+TGG | - | chr1_4:11561953-11561972 | Msa0150300:intron | 25.0% |
| ! | CAGGTTATTAAAACAAAAGA+AGG | + | chr1_4:11562381-11562400 | None:intergenic | 25.0% |
| ! | ACAGTACATAGATTTCAATA+TGG | - | chr1_4:11562529-11562548 | Msa0150300:intron | 25.0% |
| ! | CAGTACATAGATTTCAATAT+GGG | - | chr1_4:11562530-11562549 | Msa0150300:intron | 25.0% |
| ! | GATGTAAAAGTAAAACTAAC+CGG | + | chr1_4:11562681-11562700 | None:intergenic | 25.0% |
| !!! | CTAGTGACAATGATTTTTTA+TGG | - | chr1_4:11562759-11562778 | Msa0150300:intron | 25.0% |
| !! | TTACATTTATACCTTTTCAG+GGG | - | chr1_4:11563094-11563113 | Msa0150300:intron | 25.0% |
| !! | AAAGAGATTTAGGTTGTGTT+TGG | + | chr1_4:11557728-11557747 | None:intergenic | 30.0% |
| AGAAAACTGAAATTAGAGAG+TGG | + | chr1_4:11557793-11557812 | None:intergenic | 30.0% | |
| ! | AGTTTTCTCATTCTCATCAA+TGG | - | chr1_4:11557805-11557824 | Msa0150300:three_prime_UTR | 30.0% |
| ATAAACAAAAGAGGGCAAAA+TGG | + | chr1_4:11558053-11558072 | None:intergenic | 30.0% | |
| !! | CCCTCTTTTGTTTATCAATT+TGG | - | chr1_4:11558058-11558077 | Msa0150300:intron | 30.0% |
| ! | ATCACTATCGTGTTTTATGT+CGG | + | chr1_4:11558139-11558158 | None:intergenic | 30.0% |
| TAGGTACATGTATACGTATA+CGG | + | chr1_4:11558470-11558489 | None:intergenic | 30.0% | |
| ! | GCCATTCAATTCAATTTTAG+TGG | - | chr1_4:11558578-11558597 | Msa0150300:CDS | 30.0% |
| CCCACTAAAATTGAATTGAA+TGG | + | chr1_4:11558582-11558601 | None:intergenic | 30.0% | |
| !!! | ATTTTAGTGGGTTAGTTCTA+TGG | - | chr1_4:11558591-11558610 | Msa0150300:CDS | 30.0% |
| GGCGAGACTTATTAATTAAA+TGG | + | chr1_4:11558662-11558681 | None:intergenic | 30.0% | |
| TAATTAATAAGTCTCGCCAT+TGG | - | chr1_4:11558664-11558683 | Msa0150300:intron | 30.0% | |
| ! | GAGACTTTTTGATCTAATAG+TGG | - | chr1_4:11558704-11558723 | Msa0150300:intron | 30.0% |
| ! | ATAGTGGAAAAAAACTTGTC+TGG | - | chr1_4:11558720-11558739 | Msa0150300:intron | 30.0% |
| CACTAAAATGGCTAATTCTT+CGG | + | chr1_4:11558767-11558786 | None:intergenic | 30.0% | |
| !!! | CTGATTTTAGGACACTAAAA+TGG | + | chr1_4:11558779-11558798 | None:intergenic | 30.0% |
| !!! | AGGTTTACCCTACTTTTTAT+TGG | + | chr1_4:11558863-11558882 | None:intergenic | 30.0% |
| TTGAGTGCAAATACAAGTTT+CGG | + | chr1_4:11559188-11559207 | None:intergenic | 30.0% | |
| ! | TCCTAAAGACTATAGTTTGT+TGG | - | chr1_4:11559365-11559384 | Msa0150300:intron | 30.0% |
| !! | CCTAAAGACTATAGTTTGTT+GGG | - | chr1_4:11559366-11559385 | Msa0150300:intron | 30.0% |
| ATCCTACCAAAATGTAAACT+AGG | - | chr1_4:11559436-11559455 | Msa0150300:intron | 30.0% | |
| TCCTACCAAAATGTAAACTA+GGG | - | chr1_4:11559437-11559456 | Msa0150300:intron | 30.0% | |
| TCATACACAAAATGGATGAA+TGG | + | chr1_4:11559730-11559749 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTCTCTCACTTTGC+TGG | - | chr1_4:11559873-11559892 | Msa0150300:intron | 30.0% |
| AACAGAACAACATAAATCGA+AGG | + | chr1_4:11560153-11560172 | None:intergenic | 30.0% | |
| ! | TGAAACTTTCTAAGAGTAGA+TGG | - | chr1_4:11560326-11560345 | Msa0150300:intron | 30.0% |
| AGCTTCACAGTATATTCAAA+TGG | + | chr1_4:11560603-11560622 | None:intergenic | 30.0% | |
| TACTGTTAGAATGTAAACCA+CGG | + | chr1_4:11560721-11560740 | None:intergenic | 30.0% | |
| TACTGTTAGAATGTAAACCA+CGG | + | chr1_4:11560721-11560740 | None:intergenic | 30.0% | |
| AACCTTCAAATATTAACCAC+GGG | + | chr1_4:11560946-11560965 | None:intergenic | 30.0% | |
| ! | AAATAGTTTGGAGTATAGTC+TGG | - | chr1_4:11560990-11561009 | Msa0150300:intron | 30.0% |
| GAAGCAAAAATTAGTGTATG+CGG | - | chr1_4:11561179-11561198 | Msa0150300:intron | 30.0% | |
| AAGCAAAAATTAGTGTATGC+GGG | - | chr1_4:11561180-11561199 | Msa0150300:intron | 30.0% | |
| ATCTATGAACATGCTTACTT+TGG | + | chr1_4:11561225-11561244 | None:intergenic | 30.0% | |
| ATTTACTAACTTCTACCTGT+GGG | - | chr1_4:11561512-11561531 | Msa0150300:CDS | 30.0% | |
| TGAAAAATCTCGTAAGAATG+TGG | - | chr1_4:11561660-11561679 | Msa0150300:intron | 30.0% | |
| GAAAAATCTCGTAAGAATGT+GGG | - | chr1_4:11561661-11561680 | Msa0150300:intron | 30.0% | |
| ! | TGCTTTCATTTTATGGTTAG+GGG | + | chr1_4:11561755-11561774 | None:intergenic | 30.0% |
| ! | GTCACATCATTATTCTTTTC+TGG | + | chr1_4:11561863-11561882 | None:intergenic | 30.0% |
| AAAAGGAGCAAGAGAAAAAT+GGG | - | chr1_4:11562008-11562027 | Msa0150300:intron | 30.0% | |
| TGAGTTAAAGATCTAAACCA+CGG | + | chr1_4:11562405-11562424 | None:intergenic | 30.0% | |
| TACCAATCAAGAATAAGTCT+CGG | + | chr1_4:11562896-11562915 | None:intergenic | 30.0% | |
| TTCTTGATTGGTATGTAATC+AGG | - | chr1_4:11562903-11562922 | Msa0150300:intron | 30.0% | |
| !! | AGAAAGTATTAACTGCATTC+AGG | - | chr1_4:11563196-11563215 | Msa0150300:CDS | 30.0% |
| !! | GAAAGTATTAACTGCATTCA+GGG | - | chr1_4:11563197-11563216 | Msa0150300:CDS | 30.0% |
| TAGTTTGGTATATTGTGAGT+AGG | - | chr1_4:11563441-11563460 | Msa0150300:five_prime_UTR | 30.0% | |
| !!! | AGGGTTTTGGAAAGAGATTT+AGG | + | chr1_4:11557738-11557757 | None:intergenic | 35.0% |
| ! | AAAGAGAAAGAGAGAGTGTA+GGG | + | chr1_4:11557757-11557776 | None:intergenic | 35.0% |
| AAACTGAAATTAGAGAGTGG+CGG | + | chr1_4:11557790-11557809 | None:intergenic | 35.0% | |
| ACTGTCAATGAAAGTGAAGA+TGG | - | chr1_4:11558014-11558033 | Msa0150300:CDS | 35.0% | |
| AAAGAGGGCAAAATGGTAAA+AGG | + | chr1_4:11558046-11558065 | None:intergenic | 35.0% | |
| CCAGTAAAATTGTGAAGTAC+CGG | - | chr1_4:11558208-11558227 | Msa0150300:CDS | 35.0% | |
| TCACTCAAAACGAGAAAAAG+TGG | + | chr1_4:11558267-11558286 | None:intergenic | 35.0% | |
| TACATGTACCTATGCAACAT+AGG | - | chr1_4:11558478-11558497 | Msa0150300:intron | 35.0% | |
| TCACATACATATGAGAGTGA+AGG | + | chr1_4:11558550-11558569 | None:intergenic | 35.0% | |
| TCATATCTCACTTGAACCAA+TGG | + | chr1_4:11558683-11558702 | None:intergenic | 35.0% | |
| AAAGTAGGGTAAACCTTAGT+CGG | - | chr1_4:11558867-11558886 | Msa0150300:intron | 35.0% | |
| AGATTACTCTTTAGGTGAGT+TGG | - | chr1_4:11559004-11559023 | Msa0150300:CDS | 35.0% | |
| GATTACTCTTTAGGTGAGTT+GGG | - | chr1_4:11559005-11559024 | Msa0150300:CDS | 35.0% | |
| ! | AAGTTTAGGACTCTGTAAGT+GGG | + | chr1_4:11559101-11559120 | None:intergenic | 35.0% |
| ! | AAAGTTTAGGACTCTGTAAG+TGG | + | chr1_4:11559102-11559121 | None:intergenic | 35.0% |
| ! | CTATAGTCTTTAGGAGAAGT+TGG | + | chr1_4:11559360-11559379 | None:intergenic | 35.0% |
| CCCAACAAACTATAGTCTTT+AGG | + | chr1_4:11559369-11559388 | None:intergenic | 35.0% | |
| !! | TCCCTAGTTTACATTTTGGT+AGG | + | chr1_4:11559441-11559460 | None:intergenic | 35.0% |
| CTGAAATTCTAACTACACAG+TGG | - | chr1_4:11559531-11559550 | Msa0150300:CDS | 35.0% | |
| ! | TAACTACACAGTGGTTAGTT+TGG | - | chr1_4:11559540-11559559 | Msa0150300:CDS | 35.0% |
| ! | CTTTGCTTTGTTCCTTCAAT+CGG | - | chr1_4:11559563-11559582 | Msa0150300:intron | 35.0% |
| AGTTTCTTCCTTAACATCAG+CGG | + | chr1_4:11559626-11559645 | None:intergenic | 35.0% | |
| TTTGCTGGCCAATTAAGAAT+AGG | - | chr1_4:11559888-11559907 | Msa0150300:intron | 35.0% | |
| CTAGAGCTTTGCAAAGAAAT+TGG | + | chr1_4:11559987-11560006 | None:intergenic | 35.0% | |
| GAAACAAAATGTCACGTATG+TGG | + | chr1_4:11560438-11560457 | None:intergenic | 35.0% | |
| CTCATGTTTACCAGAATCAT+AGG | + | chr1_4:11560893-11560912 | None:intergenic | 35.0% | |
| ATCCCGTGGTTAATATTTGA+AGG | - | chr1_4:11560941-11560960 | Msa0150300:intron | 35.0% | |
| ! | ACTTTTTGTCTCCAACATGA+CGG | + | chr1_4:11561101-11561120 | None:intergenic | 35.0% |
| ATCTGATGAGAACTCAACAA+GGG | + | chr1_4:11561139-11561158 | None:intergenic | 35.0% | |
| !!! | GTTTTTTATAAAGGGATGCC+AGG | + | chr1_4:11561480-11561499 | None:intergenic | 35.0% |
| CATTTACTAACTTCTACCTG+TGG | - | chr1_4:11561511-11561530 | Msa0150300:CDS | 35.0% | |
| TTTACTAACTTCTACCTGTG+GGG | - | chr1_4:11561513-11561532 | Msa0150300:CDS | 35.0% | |
| TATATTTACTCAATGCAGGC+AGG | - | chr1_4:11561600-11561619 | Msa0150300:CDS | 35.0% | |
| ! | TTTTGACGCAGAAAGAGAAA+AGG | - | chr1_4:11561624-11561643 | Msa0150300:intron | 35.0% |
| TATTGTTACAGCTACCCTAA+AGG | - | chr1_4:11561794-11561813 | Msa0150300:intron | 35.0% | |
| AGGCTATAACTAAGCCTTTA+GGG | + | chr1_4:11561811-11561830 | None:intergenic | 35.0% | |
| AAGGCTATAACTAAGCCTTT+AGG | + | chr1_4:11561812-11561831 | None:intergenic | 35.0% | |
| !! | TGAACTGCTCTTTAGTTTGA+AGG | + | chr1_4:11561831-11561850 | None:intergenic | 35.0% |
| GAAAAGGAGCAAGAGAAAAA+TGG | - | chr1_4:11562007-11562026 | Msa0150300:intron | 35.0% | |
| AAAGGAGCAAGAGAAAAATG+GGG | - | chr1_4:11562009-11562028 | Msa0150300:intron | 35.0% | |
| AGAAGAGCCAAGAAAACAAT+GGG | - | chr1_4:11562062-11562081 | Msa0150300:intron | 35.0% | |
| TGTCTTACGTGAAGATTTGA+AGG | - | chr1_4:11562174-11562193 | Msa0150300:intron | 35.0% | |
| AAGGTTGTGTTTCAGAAGTT+TGG | - | chr1_4:11562193-11562212 | Msa0150300:intron | 35.0% | |
| ! | TGGTGATGTGAAGGTAAATA+TGG | - | chr1_4:11562213-11562232 | Msa0150300:intron | 35.0% |
| !!! | TTGTTTTAATAACCTGACCG+TGG | - | chr1_4:11562385-11562404 | Msa0150300:intron | 35.0% |
| AAGTAAAACTAACCGGTAAC+TGG | + | chr1_4:11562674-11562693 | None:intergenic | 35.0% | |
| ACCAATCAAGAATAAGTCTC+GGG | + | chr1_4:11562895-11562914 | None:intergenic | 35.0% | |
| GTGAAGCTGAAAAACAATAC+TGG | - | chr1_4:11562925-11562944 | Msa0150300:intron | 35.0% | |
| !!! | TCTCTATTTTTTGGGATCAC+CGG | - | chr1_4:11563042-11563061 | Msa0150300:intron | 35.0% |
| CGTAATAGAGACAATGATTC+TGG | - | chr1_4:11563151-11563170 | Msa0150300:CDS | 35.0% | |
| TTCAGGGTTATTTACAACAC+TGG | - | chr1_4:11563213-11563232 | Msa0150300:intron | 35.0% | |
| AAGTAGCTGAGAACAAAATC+AGG | + | chr1_4:11563262-11563281 | None:intergenic | 35.0% | |
| !! | TCAGCTACTTTCAGATTTTG+TGG | - | chr1_4:11563272-11563291 | Msa0150300:intron | 35.0% |
| ! | CTACTTTCAGATTTTGTGGT+TGG | - | chr1_4:11563276-11563295 | Msa0150300:intron | 35.0% |
| !! | AAAGAGAGAGTGTAGGGTTT+TGG | + | chr1_4:11557751-11557770 | None:intergenic | 40.0% |
| ! | GAAAGAGAAAGAGAGAGTGT+AGG | + | chr1_4:11557758-11557777 | None:intergenic | 40.0% |
| AAATTAGAGAGTGGCGGTAT+GGG | + | chr1_4:11557784-11557803 | None:intergenic | 40.0% | |
| TGACGAAGAAACAACCAAGA+AGG | - | chr1_4:11557841-11557860 | Msa0150300:three_prime_UTR | 40.0% | |
| AACCAAGAAGGTTATACGAC+AGG | - | chr1_4:11557853-11557872 | Msa0150300:three_prime_UTR | 40.0% | |
| AACCTGTCGTATAACCTTCT+TGG | + | chr1_4:11557858-11557877 | None:intergenic | 40.0% | |
| TCAGTGATAGTAATCTTCCC+AGG | - | chr1_4:11557973-11557992 | Msa0150300:exon | 40.0% | |
| CAGTGATAGTAATCTTCCCA+GGG | - | chr1_4:11557974-11557993 | Msa0150300:exon | 40.0% | |
| TTGCTCAAGAAATCATCCCT+GGG | + | chr1_4:11557993-11558012 | None:intergenic | 40.0% | |
| TTTGCTCAAGAAATCATCCC+TGG | + | chr1_4:11557994-11558013 | None:intergenic | 40.0% | |
| ! | CACAATTTTACTGGTACTGC+CGG | + | chr1_4:11558202-11558221 | None:intergenic | 40.0% |
| ! | CCGGTACTTCACAATTTTAC+TGG | + | chr1_4:11558211-11558230 | None:intergenic | 40.0% |
| !! | GTAAAATTGTGAAGTACCGG+CGG | - | chr1_4:11558211-11558230 | Msa0150300:CDS | 40.0% |
| GTCTGGTACAACACTATTAG+TGG | - | chr1_4:11558737-11558756 | Msa0150300:intron | 40.0% | |
| !! | GGTGTGACTCGATTTTTAAG+CGG | - | chr1_4:11558888-11558907 | Msa0150300:intron | 40.0% |
| AATCCCCACAACACATCTTT+GGG | - | chr1_4:11558939-11558958 | Msa0150300:intron | 40.0% | |
| TTTCAACCTAAGCACCTTAG+CGG | - | chr1_4:11558981-11559000 | Msa0150300:CDS | 40.0% | |
| CTAAAGAGTAATCTCCGCTA+AGG | + | chr1_4:11558998-11559017 | None:intergenic | 40.0% | |
| CTTAGCGGAGATTACTCTTT+AGG | - | chr1_4:11558996-11559015 | Msa0150300:CDS | 40.0% | |
| TCTGTAAGTGGGTAATCTGT+TGG | + | chr1_4:11559090-11559109 | None:intergenic | 40.0% | |
| !! | GTTTCGGTGCTACAAAGTTT+AGG | + | chr1_4:11559115-11559134 | None:intergenic | 40.0% |
| GCTTTCGATCAGACAAGTTT+CGG | + | chr1_4:11559131-11559150 | None:intergenic | 40.0% | |
| TGTCGTGTTCATGTTAGTGT+CGG | - | chr1_4:11559274-11559293 | Msa0150300:CDS | 40.0% | |
| GTAGGATATCTCTGTAAGTG+GGG | + | chr1_4:11559423-11559442 | None:intergenic | 40.0% | |
| GGTAGGATATCTCTGTAAGT+GGG | + | chr1_4:11559424-11559443 | None:intergenic | 40.0% | |
| TGGTAGGATATCTCTGTAAG+TGG | + | chr1_4:11559425-11559444 | None:intergenic | 40.0% | |
| !! | GATGCGAAAGCATCTTAAGT+TGG | - | chr1_4:11559585-11559604 | Msa0150300:intron | 40.0% |
| GTTTCTTCCTTAACATCAGC+GGG | + | chr1_4:11559625-11559644 | None:intergenic | 40.0% | |
| TCACTCAAGCTATCAGAAGA+TGG | - | chr1_4:11559682-11559701 | Msa0150300:intron | 40.0% | |
| TCTAATCAGGCAACTGCAAT+AGG | - | chr1_4:11559780-11559799 | Msa0150300:intron | 40.0% | |
| GTCGACTACAACAGTATAGA+AGG | + | chr1_4:11559965-11559984 | None:intergenic | 40.0% | |
| TCATTCTATTCGTGCATTCC+AGG | - | chr1_4:11560495-11560514 | Msa0150300:intron | 40.0% | |
| CATTCTATTCGTGCATTCCA+GGG | - | chr1_4:11560496-11560515 | Msa0150300:intron | 40.0% | |
| !! | TCAATTACCTCTTCTGGCTT+GGG | + | chr1_4:11560549-11560568 | None:intergenic | 40.0% |
| TACTGTGAAGCTTGAAGAAG+TGG | - | chr1_4:11560611-11560630 | Msa0150300:CDS | 40.0% | |
| ! | CATAAAGCATCATTACTCGG+AGG | + | chr1_4:11560831-11560850 | None:intergenic | 40.0% |
| CTTGGTGAAAAGTTGAAGCA+TGG | - | chr1_4:11560867-11560886 | Msa0150300:intron | 40.0% | |
| AATCTGGTATTTGAATCCCG+TGG | - | chr1_4:11560927-11560946 | Msa0150300:intron | 40.0% | |
| ! | GATTTCAGGTCAACAGTGTT+CGG | - | chr1_4:11561070-11561089 | Msa0150300:intron | 40.0% |
| ! | TTTTTGTCTCCAACATGACG+GGG | + | chr1_4:11561099-11561118 | None:intergenic | 40.0% |
| ! | CTTTTTGTCTCCAACATGAC+GGG | + | chr1_4:11561100-11561119 | None:intergenic | 40.0% |
| GGAGACAAAAAGTTCTTCTG+TGG | - | chr1_4:11561108-11561127 | Msa0150300:intron | 40.0% | |
| CATCTGATGAGAACTCAACA+AGG | + | chr1_4:11561140-11561159 | None:intergenic | 40.0% | |
| GTGAGTGATTATGATTCTCC+TGG | - | chr1_4:11561459-11561478 | Msa0150300:intron | 40.0% | |
| TATTTGTGTTATCCTCCTCG+TGG | + | chr1_4:11561693-11561712 | None:intergenic | 40.0% | |
| ! | GGGTTTTTGCTCATCTGTTT+TGG | + | chr1_4:11561885-11561904 | None:intergenic | 40.0% |
| GAAAACAATGGAGTGAACGA+AGG | - | chr1_4:11561965-11561984 | Msa0150300:intron | 40.0% | |
| AAATGGGGTGAAGGAAGAAA+AGG | - | chr1_4:11562024-11562043 | Msa0150300:intron | 40.0% | |
| GAGAAGAGCCAAGAAAACAA+TGG | - | chr1_4:11562061-11562080 | Msa0150300:intron | 40.0% | |
| GAAGAGCCAAGAAAACAATG+GGG | - | chr1_4:11562063-11562082 | Msa0150300:intron | 40.0% | |
| !!! | CTGTTTTTTTCCCAGTTTCC+TGG | + | chr1_4:11562126-11562145 | None:intergenic | 40.0% |
| !! | TCAGAAGTTTGGTGATGTGA+AGG | - | chr1_4:11562204-11562223 | Msa0150300:intron | 40.0% |
| TAAAGATCTAAACCACGGTC+AGG | + | chr1_4:11562400-11562419 | None:intergenic | 40.0% | |
| TTCAATATGGGAGATGAGTC+AGG | - | chr1_4:11562542-11562561 | Msa0150300:intron | 40.0% | |
| GAGATGAGTCAGGATTCATT+CGG | - | chr1_4:11562552-11562571 | Msa0150300:intron | 40.0% | |
| ! | GTCTGTTTGGTTCAAACAAG+AGG | + | chr1_4:11562872-11562891 | None:intergenic | 40.0% |
| CCAATCAAGAATAAGTCTCG+GGG | + | chr1_4:11562894-11562913 | None:intergenic | 40.0% | |
| ! | TATCTTGTTTACCACGAAGC+TGG | + | chr1_4:11562953-11562972 | None:intergenic | 40.0% |
| !! | AGAGAAAGTTTTAGCAACCG+AGG | - | chr1_4:11562978-11562997 | Msa0150300:intron | 40.0% |
| !! | AAAGTTTTAGCAACCGAGGA+AGG | - | chr1_4:11562982-11563001 | Msa0150300:intron | 40.0% |
| !!! | CTCTATTTTTTGGGATCACC+GGG | - | chr1_4:11563043-11563062 | Msa0150300:intron | 40.0% |
| !!! | TCTATTTTTTGGGATCACCG+GGG | - | chr1_4:11563044-11563063 | Msa0150300:intron | 40.0% |
| !! | CATTTATACCTTTTCAGGGG+AGG | - | chr1_4:11563097-11563116 | Msa0150300:intron | 40.0% |
| TGGTTTAGTAGCTGCTTCAA+GGG | - | chr1_4:11563233-11563252 | Msa0150300:intron | 40.0% | |
| GAAATTAGAGAGTGGCGGTA+TGG | + | chr1_4:11557785-11557804 | None:intergenic | 45.0% | |
| ATCTTCCGTACCTGTTGCAT+AGG | - | chr1_4:11558442-11558461 | Msa0150300:intron | 45.0% | |
| GTATACGGTACCTATGCAAC+AGG | + | chr1_4:11558455-11558474 | None:intergenic | 45.0% | |
| GACATCGACCTATGTTGCAT+AGG | + | chr1_4:11558489-11558508 | None:intergenic | 45.0% | |
| ATGCAACATAGGTCGATGTC+TGG | - | chr1_4:11558489-11558508 | Msa0150300:intron | 45.0% | |
| ! | AAATCGAGTCACACCGACTA+AGG | + | chr1_4:11558883-11558902 | None:intergenic | 45.0% |
| !! | TTTTTAAGCGGCTGACCTTG+TGG | - | chr1_4:11558900-11558919 | Msa0150300:intron | 45.0% |
| ! | TTTTAAGCGGCTGACCTTGT+GGG | - | chr1_4:11558901-11558920 | Msa0150300:intron | 45.0% |
| CAATCCCCACAACACATCTT+TGG | - | chr1_4:11558938-11558957 | Msa0150300:intron | 45.0% | |
| ATCCCCACAACACATCTTTG+GGG | - | chr1_4:11558940-11558959 | Msa0150300:intron | 45.0% | |
| ! | TAATCTCCGCTAAGGTGCTT+AGG | + | chr1_4:11558990-11559009 | None:intergenic | 45.0% |
| TGTCAGACACAGACATGTGT+TGG | + | chr1_4:11559165-11559184 | None:intergenic | 45.0% | |
| TGATGTGTCAGAATCGTGTC+TGG | - | chr1_4:11559239-11559258 | Msa0150300:CDS | 45.0% | |
| CAACTCCTGTTGTCAACGTT+GGG | + | chr1_4:11559312-11559331 | None:intergenic | 45.0% | |
| TCAACTCCTGTTGTCAACGT+TGG | + | chr1_4:11559313-11559332 | None:intergenic | 45.0% | |
| !! | TAGTTTGTTGGGATGCTCTG+TGG | - | chr1_4:11559377-11559396 | Msa0150300:intron | 45.0% |
| !! | AGTTTGTTGGGATGCTCTGT+GGG | - | chr1_4:11559378-11559397 | Msa0150300:intron | 45.0% |
| ATGCTTTCGCATCCGATTGA+AGG | + | chr1_4:11559578-11559597 | None:intergenic | 45.0% | |
| TACTAAGCCCGCTGATGTTA+AGG | - | chr1_4:11559615-11559634 | Msa0150300:intron | 45.0% | |
| ! | CTCAATTACCTCTTCTGGCT+TGG | + | chr1_4:11560550-11560569 | None:intergenic | 45.0% |
| ACCTGCTCAATTACCTCTTC+TGG | + | chr1_4:11560555-11560574 | None:intergenic | 45.0% | |
| GAAGAAGTGGAGTCCTTCTT+CGG | - | chr1_4:11560624-11560643 | Msa0150300:CDS | 45.0% | |
| CTTGGCATATTGACCGAAGA+AGG | + | chr1_4:11560640-11560659 | None:intergenic | 45.0% | |
| CTTCTTCGGTCAATATGCCA+AGG | - | chr1_4:11560638-11560657 | Msa0150300:CDS | 45.0% | |
| TGAAGCATGGCCTATGATTC+TGG | - | chr1_4:11560880-11560899 | Msa0150300:intron | 45.0% | |
| CAATGGAGTGAACGAAGGAA+AGG | - | chr1_4:11561970-11561989 | Msa0150300:intron | 45.0% | |
| GCAAGAGAAAAATGGGGTGA+AGG | - | chr1_4:11562015-11562034 | Msa0150300:intron | 45.0% | |
| CTGTTGGGACTTTCTTCCTT+TGG | - | chr1_4:11562253-11562272 | Msa0150300:intron | 45.0% | |
| GCTACTCTAGATCCAGTTAC+CGG | - | chr1_4:11562659-11562678 | Msa0150300:intron | 45.0% | |
| AATAAGTCTCGGGGTCTGTT+TGG | + | chr1_4:11562885-11562904 | None:intergenic | 45.0% | |
| CCCCGAGACTTATTCTTGAT+TGG | - | chr1_4:11562891-11562910 | Msa0150300:intron | 45.0% | |
| !!! | CTATTTTTTGGGATCACCGG+GGG | - | chr1_4:11563045-11563064 | Msa0150300:intron | 45.0% |
| ! | AGTTTGAGTTTCACTACCCC+CGG | + | chr1_4:11563064-11563083 | None:intergenic | 45.0% |
| !! | TTATACCTTTTCAGGGGAGG+AGG | - | chr1_4:11563100-11563119 | Msa0150300:intron | 45.0% |
| AGAGACAATGATTCTGGACG+AGG | - | chr1_4:11563157-11563176 | Msa0150300:CDS | 45.0% | |
| CTGGTTTAGTAGCTGCTTCA+AGG | - | chr1_4:11563232-11563251 | Msa0150300:intron | 45.0% | |
| !!! | TTTTTAAAAAATTAAAGTTT+GGG | + | chr1_4:11558415-11558434 | None:intergenic | 5.0% |
| !!! | ATTTTTAAAAAATTAAAGTT+TGG | + | chr1_4:11558416-11558435 | None:intergenic | 5.0% |
| !!! | TATATATTTTTTTTTTTTGA+AGG | + | chr1_4:11560684-11560703 | None:intergenic | 5.0% |
| !! | ATATTATTATAATTTCTTAT+AGG | - | chr1_4:11561308-11561327 | Msa0150300:intron | 5.0% |
| CGGTACCTATGCAACAGGTA+CGG | + | chr1_4:11558450-11558469 | None:intergenic | 50.0% | |
| TTTAAGCGGCTGACCTTGTG+GGG | - | chr1_4:11558902-11558921 | Msa0150300:intron | 50.0% | |
| CTCCCCAAAGATGTGTTGTG+GGG | + | chr1_4:11558945-11558964 | None:intergenic | 50.0% | |
| CCTCCCCAAAGATGTGTTGT+GGG | + | chr1_4:11558946-11558965 | None:intergenic | 50.0% | |
| ! | CCACAACACATCTTTGGGGA+GGG | - | chr1_4:11558944-11558963 | Msa0150300:intron | 50.0% |
| ! | CACAACACATCTTTGGGGAG+GGG | - | chr1_4:11558945-11558964 | Msa0150300:intron | 50.0% |
| ! | TTTAGGTGAGTTGGGTCCCT+TGG | - | chr1_4:11559013-11559032 | Msa0150300:CDS | 50.0% |
| ! | TTAGGTGAGTTGGGTCCCTT+GGG | - | chr1_4:11559014-11559033 | Msa0150300:CDS | 50.0% |
| ! | TGTCTGATCGAAAGCGTGTC+CGG | - | chr1_4:11559136-11559155 | Msa0150300:CDS | 50.0% |
| !! | TGTTAGTGTCGGTGCTTCAC+AGG | - | chr1_4:11559285-11559304 | Msa0150300:CDS | 50.0% |
| GAGTTGAACATACGCCCTTG+CGG | - | chr1_4:11559326-11559345 | Msa0150300:CDS | 50.0% | |
| AGTTGAACATACGCCCTTGC+GGG | - | chr1_4:11559327-11559346 | Msa0150300:CDS | 50.0% | |
| ! | GTTTGTTGGGATGCTCTGTG+GGG | - | chr1_4:11559379-11559398 | Msa0150300:intron | 50.0% |
| ATCTCTGTAAGTGGGGCCTT+TGG | + | chr1_4:11559416-11559435 | None:intergenic | 50.0% | |
| TGCATTCCAGGGAGCAAAGT+TGG | - | chr1_4:11560507-11560526 | Msa0150300:intron | 50.0% | |
| TGAACTTCCCAAGCCAGAAG+AGG | - | chr1_4:11560539-11560558 | Msa0150300:CDS | 50.0% | |
| GCCAGAAGAGGTAATTGAGC+AGG | - | chr1_4:11560551-11560570 | Msa0150300:CDS | 50.0% | |
| GCATCATTACTCGGAGGCTA+AGG | + | chr1_4:11560825-11560844 | None:intergenic | 50.0% | |
| TGTGTTATCCTCCTCGTGGT+TGG | + | chr1_4:11561689-11561708 | None:intergenic | 50.0% | |
| TCCTCAGCAGCAACTTCAGA+GGG | + | chr1_4:11561905-11561924 | None:intergenic | 50.0% | |
| TTCCTCAGCAGCAACTTCAG+AGG | + | chr1_4:11561906-11561925 | None:intergenic | 50.0% | |
| TGGAGTGAACGAAGGAAAGG+AGG | - | chr1_4:11561973-11561992 | Msa0150300:intron | 50.0% | |
| AACGAAGGAAAGGAGGCTGA+AGG | - | chr1_4:11561980-11561999 | Msa0150300:intron | 50.0% | |
| AGCCAAGAAAACAATGGGGC+AGG | - | chr1_4:11562067-11562086 | Msa0150300:intron | 50.0% | |
| ! | CACCTGCCCCATTGTTTTCT+TGG | + | chr1_4:11562072-11562091 | None:intergenic | 50.0% |
| GAAAACAATGGGGCAGGTGA+AGG | - | chr1_4:11562073-11562092 | Msa0150300:intron | 50.0% | |
| GGTGAAGGAAAGGTGACTGA+AGG | - | chr1_4:11562088-11562107 | Msa0150300:intron | 50.0% | |
| !! | GTGACTGAAGGTGCCGAAAA+GGG | - | chr1_4:11562100-11562119 | Msa0150300:intron | 50.0% |
| ! | TTTTCCCGTTCTCCAGCTGT+TGG | - | chr1_4:11562237-11562256 | Msa0150300:intron | 50.0% |
| TTTCCCGTTCTCCAGCTGTT+GGG | - | chr1_4:11562238-11562257 | Msa0150300:intron | 50.0% | |
| AAGTCCCAACAGCTGGAGAA+CGG | + | chr1_4:11562245-11562264 | None:intergenic | 50.0% | |
| AGGAAGAAAGTCCCAACAGC+TGG | + | chr1_4:11562252-11562271 | None:intergenic | 50.0% | |
| ! | TAAGCCCCCCTTTTCCGAAA+GGG | + | chr1_4:11562621-11562640 | None:intergenic | 50.0% |
| TAGCAACCGAGGAAGGTAAG+TGG | - | chr1_4:11562989-11563008 | Msa0150300:intron | 50.0% | |
| CGAGAAAAAGTGGAGTCCCG+CGG | + | chr1_4:11558257-11558276 | None:intergenic | 55.0% | |
| TTAAGCGGCTGACCTTGTGG+GGG | - | chr1_4:11558903-11558922 | Msa0150300:intron | 55.0% | |
| AATAGCAGTCCTCCCCCACA+AGG | + | chr1_4:11558918-11558937 | None:intergenic | 55.0% | |
| ! | CCCACAACACATCTTTGGGG+AGG | - | chr1_4:11558943-11558962 | Msa0150300:intron | 55.0% |
| CCCTCCCCAAAGATGTGTTG+TGG | + | chr1_4:11558947-11558966 | None:intergenic | 55.0% | |
| CCTTACCCTAGTCAGCCCAA+GGG | + | chr1_4:11559032-11559051 | None:intergenic | 55.0% | |
| ACCTTACCCTAGTCAGCCCA+AGG | + | chr1_4:11559033-11559052 | None:intergenic | 55.0% | |
| TGGGCTGACTAGGGTAAGGT+AGG | - | chr1_4:11559033-11559052 | Msa0150300:CDS | 55.0% | |
| CTAGGGTAAGGTAGGCCTCA+AGG | - | chr1_4:11559041-11559060 | Msa0150300:CDS | 55.0% | |
| ! | CACAGACATGTGTTGGCCAC+CGG | + | chr1_4:11559158-11559177 | None:intergenic | 55.0% |
| CAGGTCCCAACGTTGACAAC+AGG | - | chr1_4:11559304-11559323 | Msa0150300:CDS | 55.0% | |
| GTTGAACATACGCCCTTGCG+GGG | - | chr1_4:11559328-11559347 | Msa0150300:CDS | 55.0% | |
| ! | AGTTGGCTCATACCCCGCAA+GGG | + | chr1_4:11559343-11559362 | None:intergenic | 55.0% |
| ! | AAGTTGGCTCATACCCCGCA+AGG | + | chr1_4:11559344-11559363 | None:intergenic | 55.0% |
| TTCCAGGGAGCAAAGTTGGC+AGG | - | chr1_4:11560511-11560530 | Msa0150300:intron | 55.0% | |
| ATCCTGCCAACTTTGCTCCC+TGG | + | chr1_4:11560516-11560535 | None:intergenic | 55.0% | |
| !! | CGGGCGCTGAGCTAGAATTA+AGG | - | chr1_4:11561199-11561218 | Msa0150300:intron | 55.0% |
| AAGACTGTCTTACGCCCCAC+AGG | + | chr1_4:11561530-11561549 | None:intergenic | 55.0% | |
| GAATGTGGGTTCCAACCACG+AGG | - | chr1_4:11561675-11561694 | Msa0150300:intron | 55.0% | |
| !! | ACCCTCTGAAGTTGCTGCTG+AGG | - | chr1_4:11561901-11561920 | Msa0150300:intron | 55.0% |
| GGAGGCTGAAGGCGAAGAAA+AGG | - | chr1_4:11561991-11562010 | Msa0150300:intron | 55.0% | |
| CAATGGGGCAGGTGAAGGAA+AGG | - | chr1_4:11562078-11562097 | Msa0150300:intron | 55.0% | |
| !! | GGTGACTGAAGGTGCCGAAA+AGG | - | chr1_4:11562099-11562118 | Msa0150300:intron | 55.0% |
| ! | CCCAGTTTCCTGGCCCTTTT+CGG | + | chr1_4:11562116-11562135 | None:intergenic | 55.0% |
| CCGAAAAGGGCCAGGAAACT+GGG | - | chr1_4:11562113-11562132 | Msa0150300:intron | 55.0% | |
| AGTCCCAACAGCTGGAGAAC+GGG | + | chr1_4:11562244-11562263 | None:intergenic | 55.0% | |
| CGAGCTTTCTGAGCAGCTTC+AGG | + | chr1_4:11562587-11562606 | None:intergenic | 55.0% | |
| TGCTGCAGCCCTTTCGGAAA+AGG | - | chr1_4:11562610-11562629 | Msa0150300:intron | 55.0% | |
| GCTGCAGCCCTTTCGGAAAA+GGG | - | chr1_4:11562611-11562630 | Msa0150300:intron | 55.0% | |
| CTGCAGCCCTTTCGGAAAAG+GGG | - | chr1_4:11562612-11562631 | Msa0150300:intron | 55.0% | |
| TGCAGCCCTTTCGGAAAAGG+GGG | - | chr1_4:11562613-11562632 | Msa0150300:intron | 55.0% | |
| ! | CTAAGCCCCCCTTTTCCGAA+AGG | + | chr1_4:11562622-11562641 | None:intergenic | 55.0% |
| CAATACTGGAGCCAGCTTCG+TGG | - | chr1_4:11562939-11562958 | Msa0150300:intron | 55.0% | |
| !! | TGCGTGCCACTTACCTTCCT+CGG | + | chr1_4:11562998-11563017 | None:intergenic | 55.0% |
| !! | ACCTTTTCAGGGGAGGAGGA+AGG | - | chr1_4:11563104-11563123 | Msa0150300:intron | 55.0% |
| ACCTTCCTCCTCCCCTGAAA+AGG | + | chr1_4:11563108-11563127 | None:intergenic | 55.0% | |
| TTCAGGGGAGGAGGAAGGTA+TGG | - | chr1_4:11563109-11563128 | Msa0150300:intron | 55.0% | |
| ! | GGAGGAGGAAGGTATGGTAG+AGG | - | chr1_4:11563115-11563134 | Msa0150300:intron | 55.0% |
| ! | GGAGGAAGGTATGGTAGAGG+AGG | - | chr1_4:11563118-11563137 | Msa0150300:intron | 55.0% |
| !! | TGTGAAGTACCGGCGGTACC+AGG | - | chr1_4:11558218-11558237 | Msa0150300:CDS | 60.0% |
| TTGGGTCCCTTGGGCTGACT+AGG | - | chr1_4:11559023-11559042 | Msa0150300:CDS | 60.0% | |
| TGGGTCCCTTGGGCTGACTA+GGG | - | chr1_4:11559024-11559043 | Msa0150300:CDS | 60.0% | |
| CCCTTGGGCTGACTAGGGTA+AGG | - | chr1_4:11559029-11559048 | Msa0150300:CDS | 60.0% | |
| TCAGCGCTCTGTGAGCCTTG+AGG | + | chr1_4:11559059-11559078 | None:intergenic | 60.0% | |
| ! | CTGATCGAAAGCGTGTCCGG+TGG | - | chr1_4:11559139-11559158 | Msa0150300:CDS | 60.0% |
| TGGGGCCACTGTGGTACCAA+AGG | - | chr1_4:11559397-11559416 | Msa0150300:intron | 60.0% | |
| TGGGGCCTTTGGTACCACAG+TGG | + | chr1_4:11559405-11559424 | None:intergenic | 60.0% | |
| GTTCGGTTGCCCCGTCATGT+TGG | - | chr1_4:11561087-11561106 | Msa0150300:intron | 60.0% | |
| TGTGGGTTCCAACCACGAGG+AGG | - | chr1_4:11561678-11561697 | Msa0150300:intron | 60.0% | |
| !! | TGAAGGTGCCGAAAAGGGCC+AGG | - | chr1_4:11562105-11562124 | Msa0150300:intron | 60.0% |
| GCCGAAAAGGGCCAGGAAAC+TGG | - | chr1_4:11562112-11562131 | Msa0150300:intron | 60.0% | |
| ! | TCGTGCTGCTGCAGCCCTTT+CGG | - | chr1_4:11562604-11562623 | Msa0150300:intron | 60.0% |
| GCAGCCCTTTCGGAAAAGGG+GGG | - | chr1_4:11562614-11562633 | Msa0150300:intron | 60.0% | |
| AGGCACGTACCTGGTACCGC+CGG | + | chr1_4:11558230-11558249 | None:intergenic | 65.0% | |
| CAGGTACGTGCCTGGTACCG+CGG | - | chr1_4:11558237-11558256 | Msa0150300:CDS | 65.0% | |
| AGGTACGTGCCTGGTACCGC+GGG | - | chr1_4:11558238-11558257 | Msa0150300:CDS | 65.0% | |
| AAGTGGAGTCCCGCGGTACC+AGG | + | chr1_4:11558250-11558269 | None:intergenic | 65.0% | |
| GATGCTCTGTGGGGCCACTG+TGG | - | chr1_4:11559388-11559407 | Msa0150300:intron | 65.0% | |
| GGCGGTACCAGGTACGTGCC+TGG | - | chr1_4:11558229-11558248 | Msa0150300:CDS | 70.0% | |
| CGCGGTACCAGGCACGTACC+TGG | + | chr1_4:11558239-11558258 | None:intergenic | 70.0% | |
| AGCGGCTGACCTTGTGGGGG+AGG | - | chr1_4:11558906-11558925 | Msa0150300:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 11557719 | 11563469 | 11557719 | ID=Msa0150300;Name=Msa0150300 |
| chr1_4 | mRNA | 11557719 | 11563469 | 11557719 | ID=Msa0150300-mRNA-1;Parent=Msa0150300;Name=Msa0150300-mRNA-1;_AED=0.03;_eAED=0.03;_QI=105|1|1|1|1|1|10|262|473 |
| chr1_4 | exon | 11557719 | 11558074 | 11557719 | ID=Msa0150300-mRNA-1:exon:4769;Parent=Msa0150300-mRNA-1 |
| chr1_4 | exon | 11558185 | 11558263 | 11558185 | ID=Msa0150300-mRNA-1:exon:4768;Parent=Msa0150300-mRNA-1 |
| chr1_4 | exon | 11558508 | 11558655 | 11558508 | ID=Msa0150300-mRNA-1:exon:4767;Parent=Msa0150300-mRNA-1 |
| chr1_4 | exon | 11558963 | 11559383 | 11558963 | ID=Msa0150300-mRNA-1:exon:4766;Parent=Msa0150300-mRNA-1 |
| chr1_4 | exon | 11559466 | 11559570 | 11559466 | ID=Msa0150300-mRNA-1:exon:4765;Parent=Msa0150300-mRNA-1 |
| chr1_4 | exon | 11559962 | 11560110 | 11559962 | ID=Msa0150300-mRNA-1:exon:4764;Parent=Msa0150300-mRNA-1 |
| chr1_4 | exon | 11560529 | 11560671 | 11560529 | ID=Msa0150300-mRNA-1:exon:4763;Parent=Msa0150300-mRNA-1 |
| chr1_4 | exon | 11561485 | 11561637 | 11561485 | ID=Msa0150300-mRNA-1:exon:4762;Parent=Msa0150300-mRNA-1 |
| chr1_4 | exon | 11563150 | 11563228 | 11563150 | ID=Msa0150300-mRNA-1:exon:4761;Parent=Msa0150300-mRNA-1 |
| chr1_4 | exon | 11563314 | 11563469 | 11563314 | ID=Msa0150300-mRNA-1:exon:4760;Parent=Msa0150300-mRNA-1 |
| chr1_4 | five_prime_UTR | 11563365 | 11563469 | 11563365 | ID=Msa0150300-mRNA-1:five_prime_utr;Parent=Msa0150300-mRNA-1 |
| chr1_4 | CDS | 11563314 | 11563364 | 11563314 | ID=Msa0150300-mRNA-1:cds;Parent=Msa0150300-mRNA-1 |
| chr1_4 | CDS | 11563150 | 11563228 | 11563150 | ID=Msa0150300-mRNA-1:cds;Parent=Msa0150300-mRNA-1 |
| chr1_4 | CDS | 11561485 | 11561637 | 11561485 | ID=Msa0150300-mRNA-1:cds;Parent=Msa0150300-mRNA-1 |
| chr1_4 | CDS | 11560529 | 11560671 | 11560529 | ID=Msa0150300-mRNA-1:cds;Parent=Msa0150300-mRNA-1 |
| chr1_4 | CDS | 11559962 | 11560110 | 11559962 | ID=Msa0150300-mRNA-1:cds;Parent=Msa0150300-mRNA-1 |
| chr1_4 | CDS | 11559466 | 11559570 | 11559466 | ID=Msa0150300-mRNA-1:cds;Parent=Msa0150300-mRNA-1 |
| chr1_4 | CDS | 11558963 | 11559383 | 11558963 | ID=Msa0150300-mRNA-1:cds;Parent=Msa0150300-mRNA-1 |
| chr1_4 | CDS | 11558508 | 11558655 | 11558508 | ID=Msa0150300-mRNA-1:cds;Parent=Msa0150300-mRNA-1 |
| chr1_4 | CDS | 11558185 | 11558263 | 11558185 | ID=Msa0150300-mRNA-1:cds;Parent=Msa0150300-mRNA-1 |
| chr1_4 | CDS | 11557981 | 11558074 | 11557981 | ID=Msa0150300-mRNA-1:cds;Parent=Msa0150300-mRNA-1 |
| chr1_4 | three_prime_UTR | 11557719 | 11557980 | 11557719 | ID=Msa0150300-mRNA-1:three_prime_utr;Parent=Msa0150300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
