Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0614600 | XP_013457218.1 | 96.574 | 759 | 5 | 1 | 1 | 738 | 1 | 759 | 0.0 | 1509 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0614600 | sp|Q84N64|ARC5_ARATH | 76.996 | 739 | 149 | 1 | 15 | 732 | 23 | 761 | 0.0 | 1164 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0614600 | A0A072UN67 | 96.574 | 759 | 5 | 1 | 1 | 738 | 1 | 759 | 0.0 | 1509 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0614600 | Msa0639260 | 0.943358 | 1.388781e-102 | -8.615850e-47 |
Msa0614600 | Msa1122920 | 0.816706 | 4.816478e-52 | -8.615850e-47 |
Msa0614600 | Msa1122930 | 0.827089 | 1.896115e-54 | -8.615850e-47 |
Msa0194370 | Msa0614600 | 0.805618 | 1.223844e-49 | -8.615850e-47 |
Msa0560650 | Msa0614600 | 0.924124 | 1.070681e-89 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0614600 | MtrunA17_Chr4g0050661 | 96.574 | 759 | 5 | 1 | 1 | 738 | 1 | 759 | 0.0 | 1509 |
Msa0614600 | MtrunA17_Chr8g0360401 | 31.626 | 449 | 262 | 10 | 21 | 442 | 27 | 457 | 9.01e-55 | 202 |
Msa0614600 | MtrunA17_Chr8g0391891 | 28.649 | 185 | 106 | 6 | 41 | 205 | 36 | 214 | 3.74e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0614600 | AT3G19720.1 | 76.996 | 739 | 149 | 1 | 15 | 732 | 23 | 761 | 0.0 | 1164 |
Msa0614600 | AT3G19720.2 | 75.372 | 739 | 125 | 2 | 15 | 732 | 23 | 725 | 0.0 | 1129 |
Msa0614600 | AT3G19720.3 | 71.742 | 775 | 126 | 4 | 15 | 732 | 23 | 761 | 0.0 | 1104 |
Msa0614600 | AT1G53140.1 | 29.204 | 565 | 345 | 15 | 21 | 549 | 43 | 588 | 1.30e-56 | 207 |
Find 205 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTCTGAAAGGATTGTTTA+TGG | 0.162341 | 4_2:+63675401 | Msa0614600:CDS |
CAGCTGTCATTGCTGCTTAA+AGG | 0.162593 | 4_2:+63673007 | Msa0614600:intron |
CTTGGTTTCTACAGAATTAA+AGG | 0.177555 | 4_2:+63675463 | Msa0614600:CDS |
CAAGCTTTGTTTCAGCTGTC+TGG | 0.191720 | 4_2:-63675334 | None:intergenic |
TGCATCCTTGGAGGAGAAAT+TGG | 0.198064 | 4_2:+63672235 | Msa0614600:CDS |
AATGCAGGGATGCGTCTTTA+TGG | 0.205537 | 4_2:+63673555 | Msa0614600:CDS |
ACAATTTCTTCCCGGGTAAT+TGG | 0.225123 | 4_2:-63673642 | None:intergenic |
TTCTTTACTTCGGTGCCTTC+TGG | 0.260535 | 4_2:+63671434 | Msa0614600:CDS |
CCGCCTGCGTCTACGCTTGA+TGG | 0.265630 | 4_2:+63671389 | Msa0614600:CDS |
AGTAATGGGCCGGCGGGTTT+TGG | 0.273814 | 4_2:-63670662 | None:intergenic |
CGCCTTAGTTGAGGCTCTAA+TGG | 0.284584 | 4_2:+63670609 | Msa0614600:CDS |
CATAGGGAAAGCACTAAATT+AGG | 0.289504 | 4_2:-63676688 | None:intergenic |
AGGTAAAGAGGAAGATTTAT+AGG | 0.291958 | 4_2:-63676756 | None:intergenic |
ACGCTTGATGGATGCATTCT+TGG | 0.313509 | 4_2:+63671401 | Msa0614600:CDS |
ACAGAAACATGTTATAAGTT+TGG | 0.314459 | 4_2:-63676807 | None:intergenic |
ATAAAAGAGGGACCTGGATT+TGG | 0.320884 | 4_2:-63670777 | None:intergenic |
ATTACTCTTCATATGAAATA+TGG | 0.321859 | 4_2:+63670679 | Msa0614600:CDS |
TTACCAGATGAGCGAATAAA+TGG | 0.323825 | 4_2:+63673218 | Msa0614600:CDS |
TAAGTTGCCTGCACGCCTTC+GGG | 0.332712 | 4_2:+63676302 | Msa0614600:CDS |
TAGTCCTGGTGTGTCTATTA+TGG | 0.333208 | 4_2:-63671105 | None:intergenic |
CTCATGGTCTCTACACAATA+AGG | 0.336061 | 4_2:+63674952 | Msa0614600:CDS |
CATCTTCAAAAGCAGATTCT+AGG | 0.339798 | 4_2:-63676329 | None:intergenic |
GGAAACTTACCAAACTTATC+AGG | 0.347296 | 4_2:-63673046 | None:intergenic |
AGCTGTCATTGCTGCTTAAA+GGG | 0.352524 | 4_2:+63673008 | Msa0614600:intron |
CGCCAGTTCTTAGATTCATT+TGG | 0.359410 | 4_2:+63675167 | Msa0614600:CDS |
TTTCGACGCGCCGGCTGTGC+TGG | 0.365785 | 4_2:+63670558 | Msa0614600:CDS |
CCTTCTGGAAGAGTTGGTTC+TGG | 0.366317 | 4_2:+63671449 | Msa0614600:CDS |
ATCACAGTCCTTGACAATTC+AGG | 0.369623 | 4_2:-63671296 | None:intergenic |
TGAAAGGATTGTTTATGGTT+TGG | 0.374121 | 4_2:+63675406 | Msa0614600:CDS |
GACCAATCTGCAACTTTCAC+TGG | 0.376245 | 4_2:+63676374 | Msa0614600:CDS |
TAAAAGAGGGACCTGGATTT+GGG | 0.377801 | 4_2:-63670776 | None:intergenic |
GATAGAAGATGTTGCATCCT+TGG | 0.381459 | 4_2:+63672223 | Msa0614600:CDS |
TTGGTACAACAAATATTTCA+TGG | 0.384673 | 4_2:+63675425 | Msa0614600:CDS |
AACCTGTTTGAAATCATCAT+TGG | 0.384824 | 4_2:-63671492 | None:intergenic |
ATAAGTTGCCTGCACGCCTT+CGG | 0.392038 | 4_2:+63676301 | Msa0614600:CDS |
TGGCATACGAGAATATTTCT+TGG | 0.392689 | 4_2:+63675445 | Msa0614600:CDS |
CCTCCATTTATTCGCTCATC+TGG | 0.395092 | 4_2:-63673221 | None:intergenic |
GCCTTAGTTGAGGCTCTAAT+GGG | 0.397310 | 4_2:+63670610 | Msa0614600:CDS |
ATGCAGGGATGCGTCTTTAT+GGG | 0.398998 | 4_2:+63673556 | Msa0614600:CDS |
ATACAGAAATTGAACTGAAA+AGG | 0.399496 | 4_2:+63676412 | Msa0614600:CDS |
GCAATGTTCTGTTCTTGTGC+TGG | 0.399727 | 4_2:-63670323 | None:intergenic |
CTTCTTTGTCTTGGAGTTGG+TGG | 0.400615 | 4_2:-63670468 | None:intergenic |
AGGCGCTCTTCCCGTCTGTT+TGG | 0.402265 | 4_2:-63670591 | None:intergenic |
GGCTCGTGCCTGTGCCTGTA+TGG | 0.405972 | 4_2:-63671159 | None:intergenic |
TTTCGACTAAGTTGGATACT+AGG | 0.408928 | 4_2:+63671321 | Msa0614600:CDS |
AAGCTTTGTTTCAGCTGTCT+GGG | 0.412861 | 4_2:-63675333 | None:intergenic |
CTTCTTTCTTGCTTTGACAA+TGG | 0.414823 | 4_2:-63672263 | None:intergenic |
AAGCATTTACAATTTCTTCC+CGG | 0.417927 | 4_2:-63673650 | None:intergenic |
CGCTCTTCCCGTCTGTTTGG+TGG | 0.420293 | 4_2:-63670588 | None:intergenic |
TCCAAAGTGTACTATCTAGA+AGG | 0.422812 | 4_2:-63675361 | None:intergenic |
TTTAGATAAGGAAAGGACTT+TGG | 0.424769 | 4_2:-63670391 | None:intergenic |
AAGCTCAGTCACGTGGCCTC+TGG | 0.425374 | 4_2:+63675290 | Msa0614600:CDS |
CTCCAATGATGATTTCAAAC+AGG | 0.429013 | 4_2:+63671490 | Msa0614600:CDS |
CACCACCGACGTGGTTGAAC+TGG | 0.431077 | 4_2:-63670636 | None:intergenic |
CTGCAGATGCATGGAGGACT+TGG | 0.434256 | 4_2:+63674910 | Msa0614600:intron |
TTTCTTCTTTGTCTTGGAGT+TGG | 0.435132 | 4_2:-63670471 | None:intergenic |
CTAATTTAGTGCTTTCCCTA+TGG | 0.441993 | 4_2:+63676689 | Msa0614600:three_prime_UTR |
TTGAAGAAATACTACAAAAG+AGG | 0.443086 | 4_2:+63672318 | Msa0614600:CDS |
GTCTTGAAGATTGTAGTGAT+TGG | 0.444388 | 4_2:+63671234 | Msa0614600:CDS |
GTCGCGCCTCCTGATAAGTT+TGG | 0.444868 | 4_2:+63673037 | Msa0614600:CDS |
CGCGCCGGCTGTGCTGGTGG+TGG | 0.453623 | 4_2:+63670564 | Msa0614600:CDS |
TGCTATTATGTCTCAGGTAC+AGG | 0.454592 | 4_2:-63676831 | None:intergenic |
CTAGTCTGCTATTATGTCTC+AGG | 0.454704 | 4_2:-63676837 | None:intergenic |
GGTGCATTTGTTGGTGCTGA+TGG | 0.455486 | 4_2:+63673242 | Msa0614600:CDS |
TGTGATTGTTTCGACTAAGT+TGG | 0.455967 | 4_2:+63671313 | Msa0614600:CDS |
TGAGTATCTAAGTGGCCATC+AGG | 0.457017 | 4_2:+63674599 | Msa0614600:CDS |
GCATCCTTGGAGGAGAAATT+GGG | 0.457953 | 4_2:+63672236 | Msa0614600:CDS |
TATTTCATATGAAGAGTAAT+GGG | 0.459153 | 4_2:-63670676 | None:intergenic |
ACAGAACATTGCATGACAAT+TGG | 0.462927 | 4_2:+63670334 | Msa0614600:five_prime_UTR |
GCTGCTTTGCTGCAGATGCA+TGG | 0.473544 | 4_2:+63674901 | Msa0614600:intron |
TATCCTTCTCTGTAGAATGC+AGG | 0.473558 | 4_2:+63673540 | Msa0614600:intron |
GTGATATAAATCAAGAATTG+AGG | 0.473579 | 4_2:+63672518 | Msa0614600:CDS |
TAGATAGTACACTTTGGAAT+CGG | 0.477027 | 4_2:+63675366 | Msa0614600:CDS |
TTAATCACCTGATGAAGAAA+AGG | 0.478366 | 4_2:-63673846 | None:intergenic |
CACCAAATGAATCTAAGAAC+TGG | 0.480476 | 4_2:-63675169 | None:intergenic |
TACAGAAATTGAACTGAAAA+GGG | 0.482398 | 4_2:+63676413 | Msa0614600:CDS |
ACCAATCTGCAACTTTCACT+GGG | 0.486344 | 4_2:+63676375 | Msa0614600:CDS |
TCTTCCTTTCTCCTTCAACT+TGG | 0.486429 | 4_2:-63672696 | None:intergenic |
TGCACGAACGAGTGACTCTA+CGG | 0.486882 | 4_2:-63671180 | None:intergenic |
AGGTCCTCCCGAAGGCGTGC+AGG | 0.495111 | 4_2:-63676309 | None:intergenic |
GGATTTGGGAGAGGGACATA+TGG | 0.496373 | 4_2:-63670762 | None:intergenic |
AAGCTTAGACAGAGGTAAAG+AGG | 0.498100 | 4_2:-63676768 | None:intergenic |
TAACATTACATGTAAATTGA+AGG | 0.498514 | 4_2:+63676635 | Msa0614600:three_prime_UTR |
CGATGCTCCTTCTCAAGAAG+TGG | 0.500444 | 4_2:-63672475 | None:intergenic |
TGATTCTCCGTTCTTTACTT+CGG | 0.501902 | 4_2:+63671424 | Msa0614600:CDS |
ATAAACAATCCTTTCAGAAG+AGG | 0.502061 | 4_2:-63675399 | None:intergenic |
TCGGTGCCTTCTGGAAGAGT+TGG | 0.507960 | 4_2:+63671443 | Msa0614600:CDS |
CCCCAGTGAAAGTTGCAGAT+TGG | 0.507995 | 4_2:-63676376 | None:intergenic |
GTGGCCATCAGGTGTTCCTC+AGG | 0.508175 | 4_2:+63674610 | Msa0614600:CDS |
TGGCCCACCACCAGCACAGC+CGG | 0.510117 | 4_2:-63670568 | None:intergenic |
CTGAGCTTTACTTCTAGTTG+TGG | 0.513837 | 4_2:-63675275 | None:intergenic |
TCAAATTATATTCAGCACAC+TGG | 0.515656 | 4_2:+63672667 | Msa0614600:intron |
GATCATTCCACTTCTTGAGA+AGG | 0.515740 | 4_2:+63672468 | Msa0614600:CDS |
AAGCAAGAAAGAAGTAGGAT+AGG | 0.516003 | 4_2:+63672272 | Msa0614600:CDS |
ATAAATGGAGGTGCATTTGT+TGG | 0.517617 | 4_2:+63673233 | Msa0614600:CDS |
AGTGGGATCATTACAAGCAT+TGG | 0.518266 | 4_2:-63675204 | None:intergenic |
TTGAATATATGAACCACTGC+TGG | 0.519819 | 4_2:+63676600 | Msa0614600:exon |
ACTGGATGAAGCCAAGTTGA+AGG | 0.521534 | 4_2:+63672685 | Msa0614600:CDS |
TCAAGAAGTGGAATGATCAA+TGG | 0.524088 | 4_2:-63672463 | None:intergenic |
GCAGGCAACTTATCCACAAT+GGG | 0.524857 | 4_2:-63676291 | None:intergenic |
CAGTTCAACCACGTCGGTGG+TGG | 0.526497 | 4_2:+63670637 | Msa0614600:CDS |
TTTCCTCTTGATGCCCATTG+TGG | 0.528183 | 4_2:+63676278 | Msa0614600:CDS |
AGCACAGCCGGCGCGTCGAA+AGG | 0.528895 | 4_2:-63670556 | None:intergenic |
ACCTTCTAGATAGTACACTT+TGG | 0.529433 | 4_2:+63675360 | Msa0614600:CDS |
TGTCAAAGCAAGAAAGAAGT+AGG | 0.531849 | 4_2:+63672267 | Msa0614600:CDS |
TGCAAAGTTGTCGAAGGCAG+AGG | 0.532153 | 4_2:-63674640 | None:intergenic |
GAAGCCAAGTTGAAGGAGAA+AGG | 0.532201 | 4_2:+63672692 | Msa0614600:CDS |
TAAGGAAATAATAATAAAAG+TGG | 0.533072 | 4_2:+63671058 | Msa0614600:intron |
ATTTCTTCCCGGGTAATTGG+AGG | 0.533870 | 4_2:-63673639 | None:intergenic |
AGGGACCTGGATTTGGGAGA+GGG | 0.534883 | 4_2:-63670770 | None:intergenic |
ATCCTTCTCTGTAGAATGCA+GGG | 0.535796 | 4_2:+63673541 | Msa0614600:intron |
CAGTTCTTAGATTCATTTGG+TGG | 0.536557 | 4_2:+63675170 | Msa0614600:CDS |
GCCCATTAGAGCCTCAACTA+AGG | 0.536655 | 4_2:-63670611 | None:intergenic |
GCGCCGGCTGTGCTGGTGGT+GGG | 0.536719 | 4_2:+63670565 | Msa0614600:CDS |
AGCATTTACAATTTCTTCCC+GGG | 0.538399 | 4_2:-63673649 | None:intergenic |
ATGATGGAACAAACTACTCT+AGG | 0.538851 | 4_2:+63673691 | Msa0614600:CDS |
CCTTCCCAATTTCTCCTCCA+AGG | 0.539759 | 4_2:-63672240 | None:intergenic |
TTGTGTAATTGCTGTTGCAA+AGG | 0.542310 | 4_2:+63673806 | Msa0614600:CDS |
GTGTCTATTATGGTGAGATT+AGG | 0.543431 | 4_2:-63671095 | None:intergenic |
CTGTTTGAAATCATCATTGG+AGG | 0.543999 | 4_2:-63671489 | None:intergenic |
ATCTTTCTATGATAAACCAT+AGG | 0.544476 | 4_2:-63676705 | None:intergenic |
GAAGAAATTGTAAATGCTTG+TGG | 0.544926 | 4_2:+63673654 | Msa0614600:CDS |
ATGAAGAGTAATGGGCCGGC+GGG | 0.546779 | 4_2:-63670668 | None:intergenic |
GGCTTGCACCCTCTTCTGAA+AGG | 0.547455 | 4_2:+63675390 | Msa0614600:CDS |
TCAAGTGCCCTCCAATTACC+CGG | 0.547552 | 4_2:+63673631 | Msa0614600:CDS |
GGACTAGTTGCTCCTGCACC+AGG | 0.550843 | 4_2:+63671122 | Msa0614600:CDS |
CACGCCTGAGGAACACCTGA+TGG | 0.551113 | 4_2:-63674614 | None:intergenic |
CTTACAGGTATTAGCTTGTG+AGG | 0.551276 | 4_2:-63673275 | None:intergenic |
GGTGCAGGAGCAACTAGTCC+TGG | 0.551746 | 4_2:-63671119 | None:intergenic |
TATGTCCCTCTCCCAAATCC+AGG | 0.552033 | 4_2:+63670765 | Msa0614600:CDS |
AACATTACATGTAAATTGAA+GGG | 0.554472 | 4_2:+63676636 | Msa0614600:three_prime_UTR |
TCTTTCTATGATAAACCATA+GGG | 0.555062 | 4_2:-63676704 | None:intergenic |
TCATGATATGTTCTTGACCA+AGG | 0.556614 | 4_2:+63672724 | Msa0614600:CDS |
AATTTGCATTACAACGCGCC+TGG | 0.559478 | 4_2:-63671270 | None:intergenic |
GGATAGGTGTGAGCAAACTT+AGG | 0.560619 | 4_2:+63672288 | Msa0614600:CDS |
ATATTTCATATGAAGAGTAA+TGG | 0.564525 | 4_2:-63670677 | None:intergenic |
CCTCCATTGTTGTGTGTGTG+TGG | 0.566787 | 4_2:-63670432 | None:intergenic |
TGCAGGGATGCGTCTTTATG+GGG | 0.567216 | 4_2:+63673557 | Msa0614600:CDS |
CGACGCGCCGGCTGTGCTGG+TGG | 0.567291 | 4_2:+63670561 | Msa0614600:CDS |
CACTTCTTGAGAAGGAGCAT+CGG | 0.568800 | 4_2:+63672476 | Msa0614600:CDS |
GCGTAGACGCAGGCGGCGAA+AGG | 0.571191 | 4_2:-63671382 | None:intergenic |
GTGGTGGGCCACCAAACAGA+CGG | 0.576585 | 4_2:+63670580 | Msa0614600:CDS |
TTTCTTCCCGGGTAATTGGA+GGG | 0.576915 | 4_2:-63673638 | None:intergenic |
CGGGAAGAGCGCCTTAGTTG+AGG | 0.577376 | 4_2:+63670600 | Msa0614600:CDS |
GAGGGACCTGGATTTGGGAG+AGG | 0.577606 | 4_2:-63670771 | None:intergenic |
TCTGTTCTTGTGCTGGCTCG+TGG | 0.578006 | 4_2:-63670316 | None:intergenic |
ATTGGAGCAACGCAACTACC+AGG | 0.580115 | 4_2:+63671252 | Msa0614600:CDS |
AAAGATTGTGAGTATCTAAG+TGG | 0.583085 | 4_2:+63674591 | Msa0614600:CDS |
TGGTGGGCCACCAAACAGAC+GGG | 0.583216 | 4_2:+63670581 | Msa0614600:CDS |
ACAAACAAATGTGCAAGAGA+AGG | 0.587825 | 4_2:+63675241 | Msa0614600:CDS |
AAATAGGGCCATACAGGCAC+AGG | 0.587978 | 4_2:+63671151 | Msa0614600:CDS |
CTTTGTTTCAGCTGTCTGGG+TGG | 0.589447 | 4_2:-63675330 | None:intergenic |
TAAACAATCCTTTCAGAAGA+GGG | 0.590872 | 4_2:-63675398 | None:intergenic |
TGCAGGCAACTTATCCACAA+TGG | 0.590908 | 4_2:-63676292 | None:intergenic |
GTTGCCTGCACGCCTTCGGG+AGG | 0.591678 | 4_2:+63676305 | Msa0614600:CDS |
AGGAGCATCGGAGCGTGACA+AGG | 0.595430 | 4_2:+63672488 | Msa0614600:CDS |
ATAGTACACTTTGGAATCGG+AGG | 0.596031 | 4_2:+63675369 | Msa0614600:CDS |
TTACAGGTATTAGCTTGTGA+GGG | 0.597671 | 4_2:-63673274 | None:intergenic |
AAGACGGAGACTCGCAATGA+GGG | 0.598166 | 4_2:-63670702 | None:intergenic |
TCAGAAGGACGTGAAAATTG+TGG | 0.598389 | 4_2:-63671347 | None:intergenic |
AGGAAAACTTCAACATCAGA+AGG | 0.598510 | 4_2:-63671362 | None:intergenic |
TCATATGAAGAGTAATGGGC+CGG | 0.598845 | 4_2:-63670672 | None:intergenic |
GACATATGGTGAGAAAGAGA+AGG | 0.599858 | 4_2:-63670748 | None:intergenic |
TTCCAGTTCAACCACGTCGG+TGG | 0.601584 | 4_2:+63670634 | Msa0614600:CDS |
GGAGTTGAAGACATTCATGA+TGG | 0.606200 | 4_2:+63673675 | Msa0614600:CDS |
AGAAGATGTTGCATCCTTGG+AGG | 0.608682 | 4_2:+63672226 | Msa0614600:CDS |
AGGCAGAGGCAACACGCCTG+AGG | 0.612673 | 4_2:-63674626 | None:intergenic |
AGAGAGTGTGAGACAGAGAG+AGG | 0.618585 | 4_2:+63670366 | Msa0614600:five_prime_UTR |
CAGTGGTTCATATATTCAAG+CGG | 0.622329 | 4_2:-63676596 | None:intergenic |
ACATATGGTGAGAAAGAGAA+GGG | 0.625084 | 4_2:-63670747 | None:intergenic |
CCATCAAGCGTAGACGCAGG+CGG | 0.625771 | 4_2:-63671389 | None:intergenic |
GGATTCTGCAAAGTTGTCGA+AGG | 0.629616 | 4_2:-63674646 | None:intergenic |
TATCCACAATGGGCATCAAG+AGG | 0.631215 | 4_2:-63676281 | None:intergenic |
AAATTGATCCTGAATTGTCA+AGG | 0.631423 | 4_2:+63671288 | Msa0614600:CDS |
GCACCACACGATATGTCTCA+TGG | 0.635950 | 4_2:+63674936 | Msa0614600:CDS |
CATCCATCAAGCGTAGACGC+AGG | 0.638774 | 4_2:-63671392 | None:intergenic |
CGTGCTTGAATCAGTTCCAG+AGG | 0.639189 | 4_2:-63675306 | None:intergenic |
ACATTACATGTAAATTGAAG+GGG | 0.642312 | 4_2:+63676637 | Msa0614600:three_prime_UTR |
TGCACAATATCATCGAGCAA+TGG | 0.644083 | 4_2:+63673581 | Msa0614600:CDS |
AACTTACCAAACTTATCAGG+AGG | 0.646410 | 4_2:-63673043 | None:intergenic |
TATGAAGAGTAATGGGCCGG+CGG | 0.646689 | 4_2:-63670669 | None:intergenic |
CAAGTGCCCTCCAATTACCC+GGG | 0.652716 | 4_2:+63673632 | Msa0614600:CDS |
TATACTCAAAGCTTAGACAG+AGG | 0.652781 | 4_2:-63676776 | None:intergenic |
CCAGAACCAACTCTTCCAGA+AGG | 0.654193 | 4_2:-63671449 | None:intergenic |
GCTTTGCTGCAGATGCATGG+AGG | 0.654747 | 4_2:+63674904 | Msa0614600:intron |
GCAGGGATGCGTCTTTATGG+GGG | 0.654781 | 4_2:+63673558 | Msa0614600:CDS |
TGTGATAGAACAGTTGCAGT+GGG | 0.655199 | 4_2:-63675221 | None:intergenic |
CAAGACGGAGACTCGCAATG+AGG | 0.657241 | 4_2:-63670703 | None:intergenic |
GAAGGCACCGAAGTAAAGAA+CGG | 0.657285 | 4_2:-63671431 | None:intergenic |
TCACACGCCTTTCGACGCGC+CGG | 0.661138 | 4_2:+63670549 | Msa0614600:CDS |
AGAAGTAAAGCTCAGTCACG+TGG | 0.668138 | 4_2:+63675283 | Msa0614600:CDS |
TTGTGATAGAACAGTTGCAG+TGG | 0.675737 | 4_2:-63675222 | None:intergenic |
CCAGATGAGCGAATAAATGG+AGG | 0.675913 | 4_2:+63673221 | Msa0614600:CDS |
CTCACCATAATAGACACACC+AGG | 0.677974 | 4_2:+63671101 | Msa0614600:CDS |
GACAGCTGAAACAAAGCTTG+CGG | 0.680189 | 4_2:+63675337 | Msa0614600:CDS |
TCAGAGAGGAGATAACAAGA+CGG | 0.684250 | 4_2:-63670718 | None:intergenic |
AAGACAAAGAAGAAAACGAG+TGG | 0.685207 | 4_2:+63670479 | Msa0614600:CDS |
CCTTGGAGGAGAAATTGGGA+AGG | 0.686239 | 4_2:+63672240 | Msa0614600:CDS |
CAGATTCTAGGTCCTCCCGA+AGG | 0.687299 | 4_2:-63676317 | None:intergenic |
GGCTTCCAGTTCAACCACGT+CGG | 0.687558 | 4_2:+63670631 | Msa0614600:CDS |
GAGAAGGGTCATCATCAGAG+AGG | 0.690656 | 4_2:-63670732 | None:intergenic |
GTGGTGGCACCAAAACCCGC+CGG | 0.702784 | 4_2:+63670653 | Msa0614600:CDS |
AGACCATGAGACATATCGTG+TGG | 0.704609 | 4_2:-63674939 | None:intergenic |
ACACTCAGAAGATCCAGCAG+TGG | 0.718528 | 4_2:-63676613 | None:intergenic |
CCAATCTGCAACTTTCACTG+GGG | 0.748437 | 4_2:+63676376 | Msa0614600:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATAAATAATTTTTTAAAA+GGG | - | chr4_2:63673367-63673386 | None:intergenic | 0.0% |
!!! | ATTATAAATAATTTTTTAAA+AGG | - | chr4_2:63673368-63673387 | None:intergenic | 0.0% |
!!! | AATTTTTTTTTCTTTTCTTT+TGG | + | chr4_2:63673385-63673404 | Msa0614600:intron | 10.0% |
!!! | TATTTTTTTCTCATAAATTT+TGG | - | chr4_2:63675808-63675827 | None:intergenic | 10.0% |
!! | TATGAGAAAAAAATATAATT+CGG | + | chr4_2:63675813-63675832 | Msa0614600:intron | 10.0% |
!!! | TTAACATAATAATTGATTTA+AGG | + | chr4_2:63675897-63675916 | Msa0614600:intron | 10.0% |
!!! | TGTTTTTTGAATTTTAGATA+AGG | - | chr4_2:63670406-63670425 | None:intergenic | 15.0% |
!!! | ATTTAATCCTTTTTTTTAAG+AGG | + | chr4_2:63670948-63670967 | Msa0614600:intron | 15.0% |
!! | TAAGGAAATAATAATAAAAG+TGG | + | chr4_2:63671058-63671077 | Msa0614600:intron | 15.0% |
!! | TACTAAAGTTAATTATTCAA+TGG | + | chr4_2:63671573-63671592 | Msa0614600:intron | 15.0% |
!!! | AAATATTTTGTTATCTTCAT+AGG | + | chr4_2:63672556-63672575 | Msa0614600:intron | 15.0% |
!!! | TAGTATACTTTTTTTTAAGA+AGG | + | chr4_2:63672878-63672897 | Msa0614600:intron | 15.0% |
!!! | TTTAATTTTGAAGAATAGAT+TGG | - | chr4_2:63674346-63674365 | None:intergenic | 15.0% |
!!! | TAATATTTTTTTTTTGCCAA+TGG | + | chr4_2:63674504-63674523 | Msa0614600:intron | 15.0% |
!!! | TTTGAATTTTAGATAAGGAA+AGG | - | chr4_2:63670401-63670420 | None:intergenic | 20.0% |
!! | TATTTCATATGAAGAGTAAT+GGG | - | chr4_2:63670679-63670698 | None:intergenic | 20.0% |
!! | ATATTTCATATGAAGAGTAA+TGG | - | chr4_2:63670680-63670699 | None:intergenic | 20.0% |
!! | ATTACTCTTCATATGAAATA+TGG | + | chr4_2:63670679-63670698 | Msa0614600:CDS | 20.0% |
!! | CAAGAAATTGATATAAAAGA+GGG | - | chr4_2:63670792-63670811 | None:intergenic | 20.0% |
!! | ACAAGAAATTGATATAAAAG+AGG | - | chr4_2:63670793-63670812 | None:intergenic | 20.0% |
!! | TAAATGTAAATGTAAATGTG+AGG | + | chr4_2:63670882-63670901 | Msa0614600:intron | 20.0% |
!! | AAATGTAAATGTAAATGTGA+GGG | + | chr4_2:63670883-63670902 | Msa0614600:intron | 20.0% |
!!! | TTTTTATTGGAAAATGTTAG+TGG | + | chr4_2:63671843-63671862 | Msa0614600:intron | 20.0% |
!! | AATTTGTGATATTAAAACCT+TGG | - | chr4_2:63672744-63672763 | None:intergenic | 20.0% |
!!! | CTTAAAAAAAAGTATACTAG+TGG | - | chr4_2:63672877-63672896 | None:intergenic | 20.0% |
!! | ATGAAACAAACAGAATATTA+AGG | - | chr4_2:63673185-63673204 | None:intergenic | 20.0% |
!! | AAAACAATTGTATAACTTAC+AGG | - | chr4_2:63673293-63673312 | None:intergenic | 20.0% |
!!! | GTAAGTTATACAATTGTTTT+CGG | + | chr4_2:63673293-63673312 | Msa0614600:intron | 20.0% |
!! | TCATTAAGCAAATATTTGAT+AGG | + | chr4_2:63673511-63673530 | Msa0614600:intron | 20.0% |
!! | CTAACAAATTACTAATTGAA+AGG | - | chr4_2:63673893-63673912 | None:intergenic | 20.0% |
!!! | CTTTCAATTAGTAATTTGTT+AGG | + | chr4_2:63673891-63673910 | Msa0614600:intron | 20.0% |
!!! | ACTATGTTTCATTTTTTTGA+AGG | + | chr4_2:63674056-63674075 | Msa0614600:intron | 20.0% |
!! | AACAGAGAATTATATAGTTA+GGG | - | chr4_2:63674097-63674116 | None:intergenic | 20.0% |
!! | AAACAGAGAATTATATAGTT+AGG | - | chr4_2:63674098-63674117 | None:intergenic | 20.0% |
!!! | GTTTAAGATTTTGAGATAAT+TGG | + | chr4_2:63674250-63674269 | Msa0614600:intron | 20.0% |
!! | AGTAAAATAATTTCGTAGTT+TGG | + | chr4_2:63674450-63674469 | Msa0614600:intron | 20.0% |
!! | AAAAATGCATAATAAACCAT+TGG | - | chr4_2:63674523-63674542 | None:intergenic | 20.0% |
!!! | ATAAATTTTGGATTTGATTG+AGG | - | chr4_2:63675796-63675815 | None:intergenic | 20.0% |
!! | TCAAATAGAACAAAAAACAT+AGG | - | chr4_2:63675862-63675881 | None:intergenic | 20.0% |
!!! | ATAGATAATAATCTCTAGAA+GGG | - | chr4_2:63676011-63676030 | None:intergenic | 20.0% |
!! | AATAGATAATAATCTCTAGA+AGG | - | chr4_2:63676012-63676031 | None:intergenic | 20.0% |
!! | ATAATTCACAATTATTGACA+TGG | - | chr4_2:63676192-63676211 | None:intergenic | 20.0% |
!! | AGATAGAAAGGAAAATAATA+GGG | - | chr4_2:63676218-63676237 | None:intergenic | 20.0% |
!! | AAGATAGAAAGGAAAATAAT+AGG | - | chr4_2:63676219-63676238 | None:intergenic | 20.0% |
!! | ATTGCATAATTTATATGTCT+TGG | + | chr4_2:63676437-63676456 | Msa0614600:intron | 20.0% |
!! | TAACATTACATGTAAATTGA+AGG | + | chr4_2:63676635-63676654 | Msa0614600:three_prime_UTR | 20.0% |
!! | AACATTACATGTAAATTGAA+GGG | + | chr4_2:63676636-63676655 | Msa0614600:three_prime_UTR | 20.0% |
!! | AAAGGATTAAATACCCATTT+TGG | - | chr4_2:63670940-63670959 | None:intergenic | 25.0% |
!! | TAGTTAGCCTCTTAAAAAAA+AGG | - | chr4_2:63670958-63670977 | None:intergenic | 25.0% |
! | AACTGATTAATTGACTAAAC+AGG | + | chr4_2:63670977-63670996 | Msa0614600:intron | 25.0% |
! | ACTGATTAATTGACTAAACA+GGG | + | chr4_2:63670978-63670997 | Msa0614600:intron | 25.0% |
!!! | AAAGTTTTTTCTGCTTTTCT+AGG | - | chr4_2:63671781-63671800 | None:intergenic | 25.0% |
! | TGTTAGTGGTTAATTTATCA+AGG | + | chr4_2:63671857-63671876 | Msa0614600:intron | 25.0% |
! | GTTAGTGGTTAATTTATCAA+GGG | + | chr4_2:63671858-63671877 | Msa0614600:intron | 25.0% |
! | AAGAAGAAGAATAAAAACTC+TGG | - | chr4_2:63672157-63672176 | None:intergenic | 25.0% |
! | TTGAAGAAATACTACAAAAG+AGG | + | chr4_2:63672318-63672337 | Msa0614600:CDS | 25.0% |
! | GTGATATAAATCAAGAATTG+AGG | + | chr4_2:63672518-63672537 | Msa0614600:CDS | 25.0% |
!!! | TTTTGTTATCTTCATAGGAA+AGG | + | chr4_2:63672561-63672580 | Msa0614600:intron | 25.0% |
!! | TTTGTTATCTTCATAGGAAA+GGG | + | chr4_2:63672562-63672581 | Msa0614600:intron | 25.0% |
! | AATATCCGATTATGCTTTAT+TGG | + | chr4_2:63672777-63672796 | Msa0614600:intron | 25.0% |
!! | ATATCCGATTATGCTTTATT+GGG | + | chr4_2:63672778-63672797 | Msa0614600:intron | 25.0% |
! | GATAGAAAATATTTGAGTCA+GGG | - | chr4_2:63672984-63673003 | None:intergenic | 25.0% |
! | AGATAGAAAATATTTGAGTC+AGG | - | chr4_2:63672985-63673004 | None:intergenic | 25.0% |
! | TATTCTGTTTGTTTCATTTC+AGG | + | chr4_2:63673188-63673207 | Msa0614600:intron | 25.0% |
!!! | ATTTTTAATTTTGACCAACC+AGG | + | chr4_2:63673778-63673797 | Msa0614600:intron | 25.0% |
!! | AAGGAATATTTTCACTTCTA+TGG | - | chr4_2:63673874-63673893 | None:intergenic | 25.0% |
!!! | TTAGTAATTTGTTAGGACTT+AGG | + | chr4_2:63673898-63673917 | Msa0614600:intron | 25.0% |
! | GAAGAAGATAAAAAGAGATT+GGG | - | chr4_2:63674168-63674187 | None:intergenic | 25.0% |
! | TGAAGAAGATAAAAAGAGAT+TGG | - | chr4_2:63674169-63674188 | None:intergenic | 25.0% |
!! | AATCTCTTTTTATCTTCTTC+AGG | + | chr4_2:63674168-63674187 | Msa0614600:CDS | 25.0% |
!!! | GCTTAAGCTTTTAGAATAAT+TGG | + | chr4_2:63674475-63674494 | Msa0614600:intron | 25.0% |
!! | TGGTTTATTATGCATTTTTG+TGG | + | chr4_2:63674524-63674543 | Msa0614600:intron | 25.0% |
! | GAAACAAAATGCATAAATAC+AGG | - | chr4_2:63674565-63674584 | None:intergenic | 25.0% |
!!! | ACAAGCTTCATTTTAGTTTT+GGG | + | chr4_2:63674798-63674817 | Msa0614600:intron | 25.0% |
! | GTCTAGGTTAAATTCAAATT+AGG | - | chr4_2:63675015-63675034 | None:intergenic | 25.0% |
! | TTTATACTATAAGAACCTCT+AGG | + | chr4_2:63675050-63675069 | Msa0614600:intron | 25.0% |
!! | GCAAATAATATTTTACCTAG+AGG | - | chr4_2:63675068-63675087 | None:intergenic | 25.0% |
! | TTGGTACAACAAATATTTCA+TGG | + | chr4_2:63675425-63675444 | Msa0614600:CDS | 25.0% |
! | TATATGCATCTTTATGTGTT+TGG | + | chr4_2:63675512-63675531 | Msa0614600:intron | 25.0% |
!! | AAAAAGAATTTTTGTCCAAG+AGG | + | chr4_2:63675642-63675661 | Msa0614600:intron | 25.0% |
! | GATAGAAAGGAAAATAATAG+GGG | - | chr4_2:63676217-63676236 | None:intergenic | 25.0% |
! | ATACAGAAATTGAACTGAAA+AGG | + | chr4_2:63676412-63676431 | Msa0614600:CDS | 25.0% |
! | TACAGAAATTGAACTGAAAA+GGG | + | chr4_2:63676413-63676432 | Msa0614600:CDS | 25.0% |
! | TCTTTGTAAATTGTTCACAA+GGG | - | chr4_2:63676466-63676485 | None:intergenic | 25.0% |
! | ATCTTTGTAAATTGTTCACA+AGG | - | chr4_2:63676467-63676486 | None:intergenic | 25.0% |
! | TTGTGAACAATTTACAAAGA+TGG | + | chr4_2:63676466-63676485 | Msa0614600:intron | 25.0% |
! | ACATTACATGTAAATTGAAG+GGG | + | chr4_2:63676637-63676656 | Msa0614600:three_prime_UTR | 25.0% |
! | TCTTTCTATGATAAACCATA+GGG | - | chr4_2:63676707-63676726 | None:intergenic | 25.0% |
! | ATCTTTCTATGATAAACCAT+AGG | - | chr4_2:63676708-63676727 | None:intergenic | 25.0% |
! | ACAGAAACATGTTATAAGTT+TGG | - | chr4_2:63676810-63676829 | None:intergenic | 25.0% |
TTTAGATAAGGAAAGGACTT+TGG | - | chr4_2:63670394-63670413 | None:intergenic | 30.0% | |
TTACAATATTCCTGCATGTT+TGG | + | chr4_2:63670812-63670831 | Msa0614600:intron | 30.0% | |
AAAATTGTGAGGACCAAAAT+GGG | + | chr4_2:63670924-63670943 | Msa0614600:intron | 30.0% | |
! | ATGTTGTCAATTTTCAGCTA+AGG | + | chr4_2:63671040-63671059 | Msa0614600:intron | 30.0% |
AAATTGATCCTGAATTGTCA+AGG | + | chr4_2:63671288-63671307 | Msa0614600:CDS | 30.0% | |
! | AACCTGTTTGAAATCATCAT+TGG | - | chr4_2:63671495-63671514 | None:intergenic | 30.0% |
! | GAATCTGAAATGAAATGGAA+AGG | - | chr4_2:63671529-63671548 | None:intergenic | 30.0% |
! | GCTTTGAATCTGAAATGAAA+TGG | - | chr4_2:63671534-63671553 | None:intergenic | 30.0% |
TAAAACAAGACAACGTGTAT+TGG | - | chr4_2:63671667-63671686 | None:intergenic | 30.0% | |
TGGTTAATTTATCAAGGGTA+GGG | + | chr4_2:63671863-63671882 | Msa0614600:intron | 30.0% | |
!! | ATAAATCTCTAAGATACCGA+AGG | - | chr4_2:63671971-63671990 | None:intergenic | 30.0% |
TTATCCAATTCACCAATCAA+CGG | + | chr4_2:63671999-63672018 | Msa0614600:intron | 30.0% | |
CAATAAATCCTAAACTTGCA+AGG | - | chr4_2:63672079-63672098 | None:intergenic | 30.0% | |
GATCTATTTAGCTGTACTTA+TGG | + | chr4_2:63672177-63672196 | Msa0614600:intron | 30.0% | |
ACAACAACAAATTCTAGTGT+AGG | - | chr4_2:63672348-63672367 | None:intergenic | 30.0% | |
! | ATCCTAAGAATGAATTTGCT+AGG | + | chr4_2:63672425-63672444 | Msa0614600:intron | 30.0% |
TACCTAGCAAATTCATTCTT+AGG | - | chr4_2:63672430-63672449 | None:intergenic | 30.0% | |
TCAAATTATATTCAGCACAC+TGG | + | chr4_2:63672667-63672686 | Msa0614600:intron | 30.0% | |
TTCACCCAATAAAGCATAAT+CGG | - | chr4_2:63672785-63672804 | None:intergenic | 30.0% | |
! | AGTATAAAAGCACACATATG+CGG | - | chr4_2:63672944-63672963 | None:intergenic | 30.0% |
ATAAGTTTGGTAAGTTTCCT+AGG | + | chr4_2:63673050-63673069 | Msa0614600:intron | 30.0% | |
ATATAAAATCCACACGAAAG+TGG | - | chr4_2:63673443-63673462 | None:intergenic | 30.0% | |
! | GTGTGGATTTTATATTTGTG+CGG | + | chr4_2:63673448-63673467 | Msa0614600:intron | 30.0% |
TAAGCAAATATTTGATAGGC+TGG | + | chr4_2:63673515-63673534 | Msa0614600:intron | 30.0% | |
AAGCATTTACAATTTCTTCC+CGG | - | chr4_2:63673653-63673672 | None:intergenic | 30.0% | |
GAAGAAATTGTAAATGCTTG+TGG | + | chr4_2:63673654-63673673 | Msa0614600:CDS | 30.0% | |
! | ATTTGAACCTTTTCTTCATC+AGG | + | chr4_2:63673839-63673858 | Msa0614600:CDS | 30.0% |
TTAATCACCTGATGAAGAAA+AGG | - | chr4_2:63673849-63673868 | None:intergenic | 30.0% | |
TCAACTTACACAATTACGTT+TGG | + | chr4_2:63673929-63673948 | Msa0614600:intron | 30.0% | |
TTGGAGCTGATTAAGAATAA+AGG | + | chr4_2:63673948-63673967 | Msa0614600:intron | 30.0% | |
TGGAGCTGATTAAGAATAAA+GGG | + | chr4_2:63673949-63673968 | Msa0614600:intron | 30.0% | |
!! | AAAGGGAATTTTGAGTAGTT+AGG | + | chr4_2:63673966-63673985 | Msa0614600:intron | 30.0% |
!! | AAGGGAATTTTGAGTAGTTA+GGG | + | chr4_2:63673967-63673986 | Msa0614600:intron | 30.0% |
GTTGAATAGGATAGGTAAAT+AGG | + | chr4_2:63673989-63674008 | Msa0614600:intron | 30.0% | |
!!! | TTCTCTGTTTTTGATACAGT+TGG | + | chr4_2:63674108-63674127 | Msa0614600:intron | 30.0% |
!!! | TCTCTGTTTTTGATACAGTT+GGG | + | chr4_2:63674109-63674128 | Msa0614600:intron | 30.0% |
TTTGAAGAATAGATTGGCAA+CGG | - | chr4_2:63674340-63674359 | None:intergenic | 30.0% | |
AAAGATTGTGAGTATCTAAG+TGG | + | chr4_2:63674591-63674610 | Msa0614600:CDS | 30.0% | |
! | AAGTGATGGTTAACTTTTCA+CGG | - | chr4_2:63674686-63674705 | None:intergenic | 30.0% |
TGGAAAGAAACTAAGCAATT+GGG | - | chr4_2:63674712-63674731 | None:intergenic | 30.0% | |
!!! | CACAAGCTTCATTTTAGTTT+TGG | + | chr4_2:63674797-63674816 | Msa0614600:intron | 30.0% |
GTTAACAATATTAGTACTCC+TGG | + | chr4_2:63674841-63674860 | Msa0614600:intron | 30.0% | |
!! | TAGATAGTACACTTTGGAAT+CGG | + | chr4_2:63675366-63675385 | Msa0614600:CDS | 30.0% |
TAAACAATCCTTTCAGAAGA+GGG | - | chr4_2:63675401-63675420 | None:intergenic | 30.0% | |
ATAAACAATCCTTTCAGAAG+AGG | - | chr4_2:63675402-63675421 | None:intergenic | 30.0% | |
! | TCTTCTGAAAGGATTGTTTA+TGG | + | chr4_2:63675401-63675420 | Msa0614600:CDS | 30.0% |
TGAAAGGATTGTTTATGGTT+TGG | + | chr4_2:63675406-63675425 | Msa0614600:CDS | 30.0% | |
CTTGGTTTCTACAGAATTAA+AGG | + | chr4_2:63675463-63675482 | Msa0614600:CDS | 30.0% | |
! | AGTAGGTCTGAAATTTACAA+TGG | - | chr4_2:63675730-63675749 | None:intergenic | 30.0% |
TCTTGAAGATATTTCACAGT+AGG | - | chr4_2:63675747-63675766 | None:intergenic | 30.0% | |
TACTGTGAAATATCTTCAAG+AGG | + | chr4_2:63675746-63675765 | Msa0614600:intron | 30.0% | |
! | ACAAAAAACATAGGTTTTCC+AGG | - | chr4_2:63675853-63675872 | None:intergenic | 30.0% |
ACACCGATAATTGATTGATT+TGG | + | chr4_2:63676150-63676169 | Msa0614600:intron | 30.0% | |
! | CACCGATAATTGATTGATTT+GGG | + | chr4_2:63676151-63676170 | Msa0614600:intron | 30.0% |
!! | ACCGATAATTGATTGATTTG+GGG | + | chr4_2:63676152-63676171 | Msa0614600:intron | 30.0% |
ACCCCAAATCAATCAATTAT+CGG | - | chr4_2:63676156-63676175 | None:intergenic | 30.0% | |
CAGTTGAACTGCAAAATATT+AGG | - | chr4_2:63676258-63676277 | None:intergenic | 30.0% | |
! | TCATGTCAAAAACATTTTCC+AGG | - | chr4_2:63676356-63676375 | None:intergenic | 30.0% |
AGGTAAAGAGGAAGATTTAT+AGG | - | chr4_2:63676759-63676778 | None:intergenic | 30.0% | |
ACAGAACATTGCATGACAAT+TGG | + | chr4_2:63670334-63670353 | Msa0614600:five_prime_UTR | 35.0% | |
TTTCTTCTTTGTCTTGGAGT+TGG | - | chr4_2:63670474-63670493 | None:intergenic | 35.0% | |
! | ACTCGTTTTCTTCTTTGTCT+TGG | - | chr4_2:63670480-63670499 | None:intergenic | 35.0% |
AAGACAAAGAAGAAAACGAG+TGG | + | chr4_2:63670479-63670498 | Msa0614600:CDS | 35.0% | |
ACATATGGTGAGAAAGAGAA+GGG | - | chr4_2:63670750-63670769 | None:intergenic | 35.0% | |
ATTGATATAAAAGAGGGACC+TGG | - | chr4_2:63670786-63670805 | None:intergenic | 35.0% | |
TACTACAAATCCAAACATGC+AGG | - | chr4_2:63670825-63670844 | None:intergenic | 35.0% | |
TAAATGTGAGGGACCAAATT+GGG | + | chr4_2:63670894-63670913 | Msa0614600:intron | 35.0% | |
! | AATTTTCTCGCTACCCAATT+TGG | - | chr4_2:63670910-63670929 | None:intergenic | 35.0% |
GAAAATTGTGAGGACCAAAA+TGG | + | chr4_2:63670923-63670942 | Msa0614600:intron | 35.0% | |
GTGTCTATTATGGTGAGATT+AGG | - | chr4_2:63671098-63671117 | None:intergenic | 35.0% | |
GTCTTGAAGATTGTAGTGAT+TGG | + | chr4_2:63671234-63671253 | Msa0614600:CDS | 35.0% | |
TGTGATTGTTTCGACTAAGT+TGG | + | chr4_2:63671313-63671332 | Msa0614600:CDS | 35.0% | |
! | TTTCGACTAAGTTGGATACT+AGG | + | chr4_2:63671321-63671340 | Msa0614600:CDS | 35.0% |
AGGAAAACTTCAACATCAGA+AGG | - | chr4_2:63671365-63671384 | None:intergenic | 35.0% | |
TGATTCTCCGTTCTTTACTT+CGG | + | chr4_2:63671424-63671443 | Msa0614600:CDS | 35.0% | |
! | CTGTTTGAAATCATCATTGG+AGG | - | chr4_2:63671492-63671511 | None:intergenic | 35.0% |
CTCCAATGATGATTTCAAAC+AGG | + | chr4_2:63671490-63671509 | Msa0614600:CDS | 35.0% | |
AAAACATCAGACAGTGTGAT+TGG | + | chr4_2:63671604-63671623 | Msa0614600:intron | 35.0% | |
! | TCAATTCTATCGATTACTGC+TGG | + | chr4_2:63671740-63671759 | Msa0614600:intron | 35.0% |
GTGGTTAATTTATCAAGGGT+AGG | + | chr4_2:63671862-63671881 | Msa0614600:intron | 35.0% | |
GGTTAATTTATCAAGGGTAG+GGG | + | chr4_2:63671864-63671883 | Msa0614600:intron | 35.0% | |
ACACTAAAGGAGTTGTGTAT+AGG | - | chr4_2:63671924-63671943 | None:intergenic | 35.0% | |
!! | AGTTATGTCGCTTTCTTTCA+CGG | - | chr4_2:63672046-63672065 | None:intergenic | 35.0% |
TTGCAGTAACAGTTGTATTC+AGG | + | chr4_2:63672096-63672115 | Msa0614600:intron | 35.0% | |
TGCAGTAACAGTTGTATTCA+GGG | + | chr4_2:63672097-63672116 | Msa0614600:intron | 35.0% | |
CTTCTTTCTTGCTTTGACAA+TGG | - | chr4_2:63672266-63672285 | None:intergenic | 35.0% | |
TGTCAAAGCAAGAAAGAAGT+AGG | + | chr4_2:63672267-63672286 | Msa0614600:CDS | 35.0% | |
AAGCAAGAAAGAAGTAGGAT+AGG | + | chr4_2:63672272-63672291 | Msa0614600:CDS | 35.0% | |
TCAAGAAGTGGAATGATCAA+TGG | - | chr4_2:63672466-63672485 | None:intergenic | 35.0% | |
TCATGATATGTTCTTGACCA+AGG | + | chr4_2:63672724-63672743 | Msa0614600:CDS | 35.0% | |
GGGTGAATTTCTTCTATTGA+TGG | + | chr4_2:63672798-63672817 | Msa0614600:intron | 35.0% | |
TTAAATAACCCTTCCTTGGT+AGG | - | chr4_2:63672835-63672854 | None:intergenic | 35.0% | |
CAGATTAAATAACCCTTCCT+TGG | - | chr4_2:63672839-63672858 | None:intergenic | 35.0% | |
CAAGGAAGGGTTATTTAATC+TGG | + | chr4_2:63672837-63672856 | Msa0614600:intron | 35.0% | |
TGGACAGATAAGTAAACTAG+TGG | - | chr4_2:63672906-63672925 | None:intergenic | 35.0% | |
TGCGGGTTCAAATCAAATAT+TGG | - | chr4_2:63672926-63672945 | None:intergenic | 35.0% | |
! | GTATAAAAGCACACATATGC+GGG | - | chr4_2:63672943-63672962 | None:intergenic | 35.0% |
AGAAAATATTTGAGTCAGGG+AGG | - | chr4_2:63672981-63673000 | None:intergenic | 35.0% | |
AACTTACCAAACTTATCAGG+AGG | - | chr4_2:63673046-63673065 | None:intergenic | 35.0% | |
GGAAACTTACCAAACTTATC+AGG | - | chr4_2:63673049-63673068 | None:intergenic | 35.0% | |
AAAAGAAATCTCACTGTCTC+AGG | + | chr4_2:63673121-63673140 | Msa0614600:intron | 35.0% | |
ATCTCCTTTCTCTTGGTAAA+TGG | + | chr4_2:63673146-63673165 | Msa0614600:intron | 35.0% | |
GTTACCATTTACCAAGAGAA+AGG | - | chr4_2:63673153-63673172 | None:intergenic | 35.0% | |
TTACCAGATGAGCGAATAAA+TGG | + | chr4_2:63673218-63673237 | Msa0614600:CDS | 35.0% | |
! | ATAAATGGAGGTGCATTTGT+TGG | + | chr4_2:63673233-63673252 | Msa0614600:CDS | 35.0% |
!! | TTACAGGTATTAGCTTGTGA+GGG | - | chr4_2:63673277-63673296 | None:intergenic | 35.0% |
TTGTAATTACCACTTTCGTG+TGG | + | chr4_2:63673431-63673450 | Msa0614600:intron | 35.0% | |
! | TGGATTTTATATTTGTGCGG+AGG | + | chr4_2:63673451-63673470 | Msa0614600:intron | 35.0% |
! | GCTGAATTTCGTTTTGTAGT+TGG | + | chr4_2:63673603-63673622 | Msa0614600:CDS | 35.0% |
! | GAATTTCGTTTTGTAGTTGG+AGG | + | chr4_2:63673606-63673625 | Msa0614600:CDS | 35.0% |
AGCATTTACAATTTCTTCCC+GGG | - | chr4_2:63673652-63673671 | None:intergenic | 35.0% | |
! | ATGATGGAACAAACTACTCT+AGG | + | chr4_2:63673691-63673710 | Msa0614600:CDS | 35.0% |
! | TTGTGTAATTGCTGTTGCAA+AGG | + | chr4_2:63673806-63673825 | Msa0614600:CDS | 35.0% |
TTGAGTAGTTAGGGTTGAAT+AGG | + | chr4_2:63673976-63673995 | Msa0614600:intron | 35.0% | |
TAGTTAGGGTTGAATAGGAT+AGG | + | chr4_2:63673981-63674000 | Msa0614600:intron | 35.0% | |
! | AGGTTAGCTGGTTAGTTAAA+AGG | + | chr4_2:63674009-63674028 | Msa0614600:intron | 35.0% |
AAGGAGTTACATGCATAGAT+AGG | + | chr4_2:63674028-63674047 | Msa0614600:intron | 35.0% | |
AGTTACATGCATAGATAGGA+AGG | + | chr4_2:63674032-63674051 | Msa0614600:intron | 35.0% | |
!!! | CTCTGTTTTTGATACAGTTG+GGG | + | chr4_2:63674110-63674129 | Msa0614600:intron | 35.0% |
GAAAGAAACTAAGCAATTGG+GGG | - | chr4_2:63674710-63674729 | None:intergenic | 35.0% | |
GGAAAGAAACTAAGCAATTG+GGG | - | chr4_2:63674711-63674730 | None:intergenic | 35.0% | |
GTGGAAAGAAACTAAGCAAT+TGG | - | chr4_2:63674713-63674732 | None:intergenic | 35.0% | |
AAAATAGTAAGCAGACAACC+AGG | - | chr4_2:63674862-63674881 | None:intergenic | 35.0% | |
!!! | CACTACCAACTTTTTAGAGT+CGG | + | chr4_2:63675135-63675154 | Msa0614600:intron | 35.0% |
!!! | ACTACCAACTTTTTAGAGTC+GGG | + | chr4_2:63675136-63675155 | Msa0614600:intron | 35.0% |
CACCAAATGAATCTAAGAAC+TGG | - | chr4_2:63675172-63675191 | None:intergenic | 35.0% | |
CAGTTCTTAGATTCATTTGG+TGG | + | chr4_2:63675170-63675189 | Msa0614600:CDS | 35.0% | |
ACAAACAAATGTGCAAGAGA+AGG | + | chr4_2:63675241-63675260 | Msa0614600:CDS | 35.0% | |
ACCTTCTAGATAGTACACTT+TGG | + | chr4_2:63675360-63675379 | Msa0614600:CDS | 35.0% | |
TCCAAAGTGTACTATCTAGA+AGG | - | chr4_2:63675364-63675383 | None:intergenic | 35.0% | |
TGGCATACGAGAATATTTCT+TGG | + | chr4_2:63675445-63675464 | Msa0614600:CDS | 35.0% | |
! | CCTGAAATTGAAGCTTGTTT+GGG | + | chr4_2:63675567-63675586 | Msa0614600:intron | 35.0% |
AGTACACAACCTAGAGTATA+TGG | + | chr4_2:63675599-63675618 | Msa0614600:intron | 35.0% | |
CAAACTTCACCATATACTCT+AGG | - | chr4_2:63675611-63675630 | None:intergenic | 35.0% | |
GAGTATATGGTGAAGTTTGA+TGG | + | chr4_2:63675612-63675631 | Msa0614600:intron | 35.0% | |
GCAGTGCATAAAAGATAGAA+AGG | - | chr4_2:63676230-63676249 | None:intergenic | 35.0% | |
CATCTTCAAAAGCAGATTCT+AGG | - | chr4_2:63676332-63676351 | None:intergenic | 35.0% | |
TTCCATGATGTCTAACTCTT+TGG | + | chr4_2:63676504-63676523 | Msa0614600:intron | 35.0% | |
CAGTGGTTCATATATTCAAG+CGG | - | chr4_2:63676599-63676618 | None:intergenic | 35.0% | |
TTGAATATATGAACCACTGC+TGG | + | chr4_2:63676600-63676619 | Msa0614600:exon | 35.0% | |
!! | CATAGGGAAAGCACTAAATT+AGG | - | chr4_2:63676691-63676710 | None:intergenic | 35.0% |
CTAATTTAGTGCTTTCCCTA+TGG | + | chr4_2:63676689-63676708 | Msa0614600:three_prime_UTR | 35.0% | |
TATACTCAAAGCTTAGACAG+AGG | - | chr4_2:63676779-63676798 | None:intergenic | 35.0% | |
!! | TCATATGAAGAGTAATGGGC+CGG | - | chr4_2:63670675-63670694 | None:intergenic | 40.0% |
TCAGAGAGGAGATAACAAGA+CGG | - | chr4_2:63670721-63670740 | None:intergenic | 40.0% | |
GACATATGGTGAGAAAGAGA+AGG | - | chr4_2:63670751-63670770 | None:intergenic | 40.0% | |
TAAAAGAGGGACCTGGATTT+GGG | - | chr4_2:63670779-63670798 | None:intergenic | 40.0% | |
ATAAAAGAGGGACCTGGATT+TGG | - | chr4_2:63670780-63670799 | None:intergenic | 40.0% | |
GTAAATGTGAGGGACCAAAT+TGG | + | chr4_2:63670893-63670912 | Msa0614600:intron | 40.0% | |
ATATTGAAGCTGAGAATGCG+AGG | + | chr4_2:63671003-63671022 | Msa0614600:intron | 40.0% | |
TAGTCCTGGTGTGTCTATTA+TGG | - | chr4_2:63671108-63671127 | None:intergenic | 40.0% | |
TGCACCAGGTCGTAAAAATA+GGG | + | chr4_2:63671136-63671155 | Msa0614600:CDS | 40.0% | |
TCGTAAAAATAGGGCCATAC+AGG | + | chr4_2:63671145-63671164 | Msa0614600:CDS | 40.0% | |
ATCACAGTCCTTGACAATTC+AGG | - | chr4_2:63671299-63671318 | None:intergenic | 40.0% | |
TCAGAAGGACGTGAAAATTG+TGG | - | chr4_2:63671350-63671369 | None:intergenic | 40.0% | |
! | AAGACAACGTGTATTGGCAA+TGG | - | chr4_2:63671661-63671680 | None:intergenic | 40.0% |
! | ATTCTATCGATTACTGCTGG+TGG | + | chr4_2:63671743-63671762 | Msa0614600:intron | 40.0% |
CTAAAGGAGTTGTGTATAGG+AGG | - | chr4_2:63671921-63671940 | None:intergenic | 40.0% | |
! | CATACCGTTGATTGGTGAAT+TGG | - | chr4_2:63672006-63672025 | None:intergenic | 40.0% |
TTTCAGCACATACCGTTGAT+TGG | - | chr4_2:63672014-63672033 | None:intergenic | 40.0% | |
GCAGTAACAGTTGTATTCAG+GGG | + | chr4_2:63672098-63672117 | Msa0614600:intron | 40.0% | |
CAGTAACAGTTGTATTCAGG+GGG | + | chr4_2:63672099-63672118 | Msa0614600:intron | 40.0% | |
TTAGCTGTACTTATGGATGC+AGG | + | chr4_2:63672184-63672203 | Msa0614600:intron | 40.0% | |
GATAGAAGATGTTGCATCCT+TGG | + | chr4_2:63672223-63672242 | Msa0614600:CDS | 40.0% | |
GATCATTCCACTTCTTGAGA+AGG | + | chr4_2:63672468-63672487 | Msa0614600:CDS | 40.0% | |
TTATCTTCATAGGAAAGGGC+AGG | + | chr4_2:63672566-63672585 | Msa0614600:intron | 40.0% | |
TATCTTCATAGGAAAGGGCA+GGG | + | chr4_2:63672567-63672586 | Msa0614600:intron | 40.0% | |
TCTTCCTTTCTCCTTCAACT+TGG | - | chr4_2:63672699-63672718 | None:intergenic | 40.0% | |
GGATATTAGAACTCCTACCA+AGG | + | chr4_2:63672819-63672838 | Msa0614600:intron | 40.0% | |
ATTAGAACTCCTACCAAGGA+AGG | + | chr4_2:63672823-63672842 | Msa0614600:intron | 40.0% | |
TTAGAACTCCTACCAAGGAA+GGG | + | chr4_2:63672824-63672843 | Msa0614600:intron | 40.0% | |
! | AGCTGTCATTGCTGCTTAAA+GGG | + | chr4_2:63673008-63673027 | Msa0614600:intron | 40.0% |
TTATCCACAAATGAGAGCCT+AGG | - | chr4_2:63673070-63673089 | None:intergenic | 40.0% | |
TCAGGATATCTCCTTTCTCT+TGG | + | chr4_2:63673139-63673158 | Msa0614600:intron | 40.0% | |
!! | CTTACAGGTATTAGCTTGTG+AGG | - | chr4_2:63673278-63673297 | None:intergenic | 40.0% |
TATCCTTCTCTGTAGAATGC+AGG | + | chr4_2:63673540-63673559 | Msa0614600:intron | 40.0% | |
ATCCTTCTCTGTAGAATGCA+GGG | + | chr4_2:63673541-63673560 | Msa0614600:intron | 40.0% | |
TGCACAATATCATCGAGCAA+TGG | + | chr4_2:63673581-63673600 | Msa0614600:CDS | 40.0% | |
ACAATTTCTTCCCGGGTAAT+TGG | - | chr4_2:63673645-63673664 | None:intergenic | 40.0% | |
GGAGTTGAAGACATTCATGA+TGG | + | chr4_2:63673675-63673694 | Msa0614600:CDS | 40.0% | |
GGATAGGTAAATAGGTTAGC+TGG | + | chr4_2:63673997-63674016 | Msa0614600:intron | 40.0% | |
TCTTCACACAAGAGCTTGAA+GGG | - | chr4_2:63674412-63674431 | None:intergenic | 40.0% | |
ATCTTCACACAAGAGCTTGA+AGG | - | chr4_2:63674413-63674432 | None:intergenic | 40.0% | |
!! | TTCACGGCATGATTTTTCAG+TGG | - | chr4_2:63674670-63674689 | None:intergenic | 40.0% |
TCATGATTTCATTCGACGTG+TGG | - | chr4_2:63674732-63674751 | None:intergenic | 40.0% | |
AGCAAAGCAGCATGGAAAAA+TGG | - | chr4_2:63674892-63674911 | None:intergenic | 40.0% | |
CTCATGGTCTCTACACAATA+AGG | + | chr4_2:63674952-63674971 | Msa0614600:CDS | 40.0% | |
! | ACAGAGTGTCATACAAGTCT+AGG | - | chr4_2:63675031-63675050 | None:intergenic | 40.0% |
!! | CGACTCTAAAAAGTTGGTAG+TGG | - | chr4_2:63675137-63675156 | None:intergenic | 40.0% |
CGCCAGTTCTTAGATTCATT+TGG | + | chr4_2:63675167-63675186 | Msa0614600:CDS | 40.0% | |
AGTGGGATCATTACAAGCAT+TGG | - | chr4_2:63675207-63675226 | None:intergenic | 40.0% | |
TGTGATAGAACAGTTGCAGT+GGG | - | chr4_2:63675224-63675243 | None:intergenic | 40.0% | |
TTGTGATAGAACAGTTGCAG+TGG | - | chr4_2:63675225-63675244 | None:intergenic | 40.0% | |
! | CTGAGCTTTACTTCTAGTTG+TGG | - | chr4_2:63675278-63675297 | None:intergenic | 40.0% |
!! | AAGCTTTGTTTCAGCTGTCT+GGG | - | chr4_2:63675336-63675355 | None:intergenic | 40.0% |
!! | ATAGTACACTTTGGAATCGG+AGG | + | chr4_2:63675369-63675388 | Msa0614600:CDS | 40.0% |
! | CTTTATGTGTTTGGTGACTC+TGG | + | chr4_2:63675521-63675540 | Msa0614600:intron | 40.0% |
TCAATTTCAGGCAAGAAAGG+AGG | - | chr4_2:63675558-63675577 | None:intergenic | 40.0% | |
GCTTCAATTTCAGGCAAGAA+AGG | - | chr4_2:63675561-63675580 | None:intergenic | 40.0% | |
! | GCCTGAAATTGAAGCTTGTT+TGG | + | chr4_2:63675566-63675585 | Msa0614600:intron | 40.0% |
CCCAAACAAGCTTCAATTTC+AGG | - | chr4_2:63675570-63675589 | None:intergenic | 40.0% | |
!! | ATCTGCTTTTGAAGATGACC+TGG | + | chr4_2:63676335-63676354 | Msa0614600:CDS | 40.0% |
ACCAATCTGCAACTTTCACT+GGG | + | chr4_2:63676375-63676394 | Msa0614600:CDS | 40.0% | |
CACCAAAGAGTTAGACATCA+TGG | - | chr4_2:63676509-63676528 | None:intergenic | 40.0% | |
CATGATGTCTAACTCTTTGG+TGG | + | chr4_2:63676507-63676526 | Msa0614600:intron | 40.0% | |
AAGCTTAGACAGAGGTAAAG+AGG | - | chr4_2:63676771-63676790 | None:intergenic | 40.0% | |
TGCTATTATGTCTCAGGTAC+AGG | - | chr4_2:63676834-63676853 | None:intergenic | 40.0% | |
CTAGTCTGCTATTATGTCTC+AGG | - | chr4_2:63676840-63676859 | None:intergenic | 40.0% | |
GCAATGTTCTGTTCTTGTGC+TGG | - | chr4_2:63670326-63670345 | None:intergenic | 45.0% | |
ACACCACACACACACAACAA+TGG | + | chr4_2:63670429-63670448 | Msa0614600:exon | 45.0% | |
CTTCTTTGTCTTGGAGTTGG+TGG | - | chr4_2:63670471-63670490 | None:intergenic | 45.0% | |
! | GCCTTAGTTGAGGCTCTAAT+GGG | + | chr4_2:63670610-63670629 | Msa0614600:CDS | 45.0% |
TGGGTAGCGAGAAAATTGTG+AGG | + | chr4_2:63670913-63670932 | Msa0614600:intron | 45.0% | |
CTCACCATAATAGACACACC+AGG | + | chr4_2:63671101-63671120 | Msa0614600:CDS | 45.0% | |
!!! | CTATTTTTACGACCTGGTGC+AGG | - | chr4_2:63671137-63671156 | None:intergenic | 45.0% |
CTGCACCAGGTCGTAAAAAT+AGG | + | chr4_2:63671135-63671154 | Msa0614600:CDS | 45.0% | |
!!! | ATGGCCCTATTTTTACGACC+TGG | - | chr4_2:63671143-63671162 | None:intergenic | 45.0% |
TCGTGCAAAAATGCAGCACA+AGG | + | chr4_2:63671196-63671215 | Msa0614600:CDS | 45.0% | |
AATTTGCATTACAACGCGCC+TGG | - | chr4_2:63671273-63671292 | None:intergenic | 45.0% | |
! | ACGCTTGATGGATGCATTCT+TGG | + | chr4_2:63671401-63671420 | Msa0614600:CDS | 45.0% |
!! | GAAGGCACCGAAGTAAAGAA+CGG | - | chr4_2:63671434-63671453 | None:intergenic | 45.0% |
!! | TTCTTTACTTCGGTGCCTTC+TGG | + | chr4_2:63671434-63671453 | Msa0614600:CDS | 45.0% |
GGGGCGAATGTTATTAGTAG+AGG | + | chr4_2:63671883-63671902 | Msa0614600:intron | 45.0% | |
! | GGCATGGGTTAAGACACTAA+AGG | - | chr4_2:63671937-63671956 | None:intergenic | 45.0% |
CCTAAACTTGCAAGGATCCA+GGG | - | chr4_2:63672071-63672090 | None:intergenic | 45.0% | |
TCCTAAACTTGCAAGGATCC+AGG | - | chr4_2:63672072-63672091 | None:intergenic | 45.0% | |
AGAAGATGTTGCATCCTTGG+AGG | + | chr4_2:63672226-63672245 | Msa0614600:CDS | 45.0% | |
TGCATCCTTGGAGGAGAAAT+TGG | + | chr4_2:63672235-63672254 | Msa0614600:CDS | 45.0% | |
GCATCCTTGGAGGAGAAATT+GGG | + | chr4_2:63672236-63672255 | Msa0614600:CDS | 45.0% | |
GGATAGGTGTGAGCAAACTT+AGG | + | chr4_2:63672288-63672307 | Msa0614600:CDS | 45.0% | |
! | CACTTCTTGAGAAGGAGCAT+CGG | + | chr4_2:63672476-63672495 | Msa0614600:CDS | 45.0% |
! | ACTGGATGAAGCCAAGTTGA+AGG | + | chr4_2:63672685-63672704 | Msa0614600:CDS | 45.0% |
! | GAAGCCAAGTTGAAGGAGAA+AGG | + | chr4_2:63672692-63672711 | Msa0614600:CDS | 45.0% |
! | CAGCTGTCATTGCTGCTTAA+AGG | + | chr4_2:63673007-63673026 | Msa0614600:intron | 45.0% |
GTTTCCTAGGCTCTCATTTG+TGG | + | chr4_2:63673063-63673082 | Msa0614600:intron | 45.0% | |
CCTCCATTTATTCGCTCATC+TGG | - | chr4_2:63673224-63673243 | None:intergenic | 45.0% | |
CCAGATGAGCGAATAAATGG+AGG | + | chr4_2:63673221-63673240 | Msa0614600:CDS | 45.0% | |
ATCCCTGCATTCTACAGAGA+AGG | - | chr4_2:63673546-63673565 | None:intergenic | 45.0% | |
AATGCAGGGATGCGTCTTTA+TGG | + | chr4_2:63673555-63673574 | Msa0614600:CDS | 45.0% | |
ATGCAGGGATGCGTCTTTAT+GGG | + | chr4_2:63673556-63673575 | Msa0614600:CDS | 45.0% | |
TTTCTTCCCGGGTAATTGGA+GGG | - | chr4_2:63673641-63673660 | None:intergenic | 45.0% | |
ATTTCTTCCCGGGTAATTGG+AGG | - | chr4_2:63673642-63673661 | None:intergenic | 45.0% | |
ATTACACAAGCAGTCCTGGT+TGG | - | chr4_2:63673795-63673814 | None:intergenic | 45.0% | |
AGCAATTACACAAGCAGTCC+TGG | - | chr4_2:63673799-63673818 | None:intergenic | 45.0% | |
TGAGTATCTAAGTGGCCATC+AGG | + | chr4_2:63674599-63674618 | Msa0614600:CDS | 45.0% | |
GGATTCTGCAAAGTTGTCGA+AGG | - | chr4_2:63674649-63674668 | None:intergenic | 45.0% | |
AGACCATGAGACATATCGTG+TGG | - | chr4_2:63674942-63674961 | None:intergenic | 45.0% | |
AGAAGTAAAGCTCAGTCACG+TGG | + | chr4_2:63675283-63675302 | Msa0614600:CDS | 45.0% | |
!! | CAAGCTTTGTTTCAGCTGTC+TGG | - | chr4_2:63675337-63675356 | None:intergenic | 45.0% |
GACAGCTGAAACAAAGCTTG+CGG | + | chr4_2:63675337-63675356 | Msa0614600:CDS | 45.0% | |
CATAAGCAGAAAGAGCCTCT+TGG | - | chr4_2:63675660-63675679 | None:intergenic | 45.0% | |
CTGAAGCTATGTTGCATGTG+TGG | - | chr4_2:63675960-63675979 | None:intergenic | 45.0% | |
CACACATGCAACATAGCTTC+AGG | + | chr4_2:63675958-63675977 | Msa0614600:intron | 45.0% | |
! | ATAGCTTCAGGTTCAGCACA+AGG | + | chr4_2:63675970-63675989 | Msa0614600:intron | 45.0% |
TTTCCTCTTGATGCCCATTG+TGG | + | chr4_2:63676278-63676297 | Msa0614600:CDS | 45.0% | |
TATCCACAATGGGCATCAAG+AGG | - | chr4_2:63676284-63676303 | None:intergenic | 45.0% | |
GCAGGCAACTTATCCACAAT+GGG | - | chr4_2:63676294-63676313 | None:intergenic | 45.0% | |
TGCAGGCAACTTATCCACAA+TGG | - | chr4_2:63676295-63676314 | None:intergenic | 45.0% | |
GACCAATCTGCAACTTTCAC+TGG | + | chr4_2:63676374-63676393 | Msa0614600:CDS | 45.0% | |
CCAATCTGCAACTTTCACTG+GGG | + | chr4_2:63676376-63676395 | Msa0614600:CDS | 45.0% | |
!! | TGGTGGTTTTGCAGATCAAG+AGG | + | chr4_2:63676524-63676543 | Msa0614600:intron | 45.0% |
!!! | TCTATTTATTTTTTTTTTAT+TGG | + | chr4_2:63671830-63671849 | Msa0614600:intron | 5.0% |
!! | TATATAAAAAATAATAATGA+TGG | - | chr4_2:63672393-63672412 | None:intergenic | 5.0% |
!!! | TATAAATAATTTTTTAAAAG+GGG | - | chr4_2:63673366-63673385 | None:intergenic | 5.0% |
!! | ATAATAATAATAATAATACA+AGG | - | chr4_2:63676051-63676070 | None:intergenic | 5.0% |
! | AGAGAGTGTGAGACAGAGAG+AGG | + | chr4_2:63670366-63670385 | Msa0614600:five_prime_UTR | 50.0% |
CCTCCATTGTTGTGTGTGTG+TGG | - | chr4_2:63670435-63670454 | None:intergenic | 50.0% | |
CCACACACACACAACAATGG+AGG | + | chr4_2:63670432-63670451 | Msa0614600:exon | 50.0% | |
! | CGCCTTAGTTGAGGCTCTAA+TGG | + | chr4_2:63670609-63670628 | Msa0614600:CDS | 50.0% |
GCCCATTAGAGCCTCAACTA+AGG | - | chr4_2:63670614-63670633 | None:intergenic | 50.0% | |
!! | TATGAAGAGTAATGGGCCGG+CGG | - | chr4_2:63670672-63670691 | None:intergenic | 50.0% |
AAGACGGAGACTCGCAATGA+GGG | - | chr4_2:63670705-63670724 | None:intergenic | 50.0% | |
GAGAAGGGTCATCATCAGAG+AGG | - | chr4_2:63670735-63670754 | None:intergenic | 50.0% | |
GGATTTGGGAGAGGGACATA+TGG | - | chr4_2:63670765-63670784 | None:intergenic | 50.0% | |
TATGTCCCTCTCCCAAATCC+AGG | + | chr4_2:63670765-63670784 | Msa0614600:CDS | 50.0% | |
TGAAGCTGAGAATGCGAGGT+TGG | + | chr4_2:63671007-63671026 | Msa0614600:intron | 50.0% | |
AAATAGGGCCATACAGGCAC+AGG | + | chr4_2:63671151-63671170 | Msa0614600:CDS | 50.0% | |
TGCACGAACGAGTGACTCTA+CGG | - | chr4_2:63671183-63671202 | None:intergenic | 50.0% | |
ATTGGAGCAACGCAACTACC+AGG | + | chr4_2:63671252-63671271 | Msa0614600:CDS | 50.0% | |
CCAGAACCAACTCTTCCAGA+AGG | - | chr4_2:63671452-63671471 | None:intergenic | 50.0% | |
! | CCTTCTGGAAGAGTTGGTTC+TGG | + | chr4_2:63671449-63671468 | Msa0614600:CDS | 50.0% |
ATTACTGCTGGTGGCATGCA+AGG | + | chr4_2:63671752-63671771 | Msa0614600:intron | 50.0% | |
AGTGTCTTAACCCATGCCAC+TGG | + | chr4_2:63671939-63671958 | Msa0614600:intron | 50.0% | |
GTGTCTTAACCCATGCCACT+GGG | + | chr4_2:63671940-63671959 | Msa0614600:intron | 50.0% | |
GAAAGCGACATAACTAGCCC+TGG | + | chr4_2:63672051-63672070 | Msa0614600:intron | 50.0% | |
CCCTGGATCCTTGCAAGTTT+AGG | + | chr4_2:63672068-63672087 | Msa0614600:intron | 50.0% | |
AACAGTTGTATTCAGGGGGC+TGG | + | chr4_2:63672103-63672122 | Msa0614600:intron | 50.0% | |
CCTTCCCAATTTCTCCTCCA+AGG | - | chr4_2:63672243-63672262 | None:intergenic | 50.0% | |
CCTTGGAGGAGAAATTGGGA+AGG | + | chr4_2:63672240-63672259 | Msa0614600:CDS | 50.0% | |
CGATGCTCCTTCTCAAGAAG+TGG | - | chr4_2:63672478-63672497 | None:intergenic | 50.0% | |
!! | GGTGCATTTGTTGGTGCTGA+TGG | + | chr4_2:63673242-63673261 | Msa0614600:CDS | 50.0% |
TGCAGGGATGCGTCTTTATG+GGG | + | chr4_2:63673557-63673576 | Msa0614600:CDS | 50.0% | |
TCAAGTGCCCTCCAATTACC+CGG | + | chr4_2:63673631-63673650 | Msa0614600:CDS | 50.0% | |
TGCAAAGTTGTCGAAGGCAG+AGG | - | chr4_2:63674643-63674662 | None:intergenic | 50.0% | |
AAGCAATTGGGGGCAAGTGA+TGG | - | chr4_2:63674700-63674719 | None:intergenic | 50.0% | |
GCACCACACGATATGTCTCA+TGG | + | chr4_2:63674936-63674955 | Msa0614600:CDS | 50.0% | |
! | CCTGCCCGACTCTAAAAAGT+TGG | - | chr4_2:63675143-63675162 | None:intergenic | 50.0% |
!!! | CCAACTTTTTAGAGTCGGGC+AGG | + | chr4_2:63675140-63675159 | Msa0614600:intron | 50.0% |
CGTGCTTGAATCAGTTCCAG+AGG | - | chr4_2:63675309-63675328 | None:intergenic | 50.0% | |
! | CTTTGTTTCAGCTGTCTGGG+TGG | - | chr4_2:63675333-63675352 | None:intergenic | 50.0% |
TCGGTAGAAACATCAGAGCC+TGG | + | chr4_2:63675832-63675851 | Msa0614600:intron | 50.0% | |
ATAAGTTGCCTGCACGCCTT+CGG | + | chr4_2:63676301-63676320 | Msa0614600:CDS | 50.0% | |
CCCCAGTGAAAGTTGCAGAT+TGG | - | chr4_2:63676379-63676398 | None:intergenic | 50.0% | |
ACACTCAGAAGATCCAGCAG+TGG | - | chr4_2:63676616-63676635 | None:intergenic | 50.0% | |
!! | TCTGTTCTTGTGCTGGCTCG+TGG | - | chr4_2:63670319-63670338 | None:intergenic | 55.0% |
GGCTTCCAGTTCAACCACGT+CGG | + | chr4_2:63670631-63670650 | Msa0614600:CDS | 55.0% | |
TTCCAGTTCAACCACGTCGG+TGG | + | chr4_2:63670634-63670653 | Msa0614600:CDS | 55.0% | |
!! | ATGAAGAGTAATGGGCCGGC+GGG | - | chr4_2:63670671-63670690 | None:intergenic | 55.0% |
CAAGACGGAGACTCGCAATG+AGG | - | chr4_2:63670706-63670725 | None:intergenic | 55.0% | |
AGGGACCTGGATTTGGGAGA+GGG | - | chr4_2:63670773-63670792 | None:intergenic | 55.0% | |
CATCCATCAAGCGTAGACGC+AGG | - | chr4_2:63671395-63671414 | None:intergenic | 55.0% | |
! | TCGGTGCCTTCTGGAAGAGT+TGG | + | chr4_2:63671443-63671462 | Msa0614600:CDS | 55.0% |
AAGGAGTAGCCCAGTGGCAT+GGG | - | chr4_2:63671952-63671971 | None:intergenic | 55.0% | |
ATGCCACTGGGCTACTCCTT+CGG | + | chr4_2:63671952-63671971 | Msa0614600:intron | 55.0% | |
ATACCGAAGGAGTAGCCCAG+TGG | - | chr4_2:63671958-63671977 | None:intergenic | 55.0% | |
GTCGCGCCTCCTGATAAGTT+TGG | + | chr4_2:63673037-63673056 | Msa0614600:CDS | 55.0% | |
GCAGGGATGCGTCTTTATGG+GGG | + | chr4_2:63673558-63673577 | Msa0614600:CDS | 55.0% | |
CAAGTGCCCTCCAATTACCC+GGG | + | chr4_2:63673632-63673651 | Msa0614600:CDS | 55.0% | |
GCATCTGCAGCAAAGCAGCA+TGG | - | chr4_2:63674900-63674919 | None:intergenic | 55.0% | |
! | GCTGCTTTGCTGCAGATGCA+TGG | + | chr4_2:63674901-63674920 | Msa0614600:intron | 55.0% |
GCTTTGCTGCAGATGCATGG+AGG | + | chr4_2:63674904-63674923 | Msa0614600:intron | 55.0% | |
CTGCAGATGCATGGAGGACT+TGG | + | chr4_2:63674910-63674929 | Msa0614600:intron | 55.0% | |
GGCTTGCACCCTCTTCTGAA+AGG | + | chr4_2:63675390-63675409 | Msa0614600:CDS | 55.0% | |
TAAGTTGCCTGCACGCCTTC+GGG | + | chr4_2:63676302-63676321 | Msa0614600:CDS | 55.0% | |
CAGATTCTAGGTCCTCCCGA+AGG | - | chr4_2:63676320-63676339 | None:intergenic | 55.0% | |
!! | GTGGTGGGCCACCAAACAGA+CGG | + | chr4_2:63670580-63670599 | Msa0614600:CDS | 60.0% |
! | TGGTGGGCCACCAAACAGAC+GGG | + | chr4_2:63670581-63670600 | Msa0614600:CDS | 60.0% |
CGCTCTTCCCGTCTGTTTGG+TGG | - | chr4_2:63670591-63670610 | None:intergenic | 60.0% | |
AGGCGCTCTTCCCGTCTGTT+TGG | - | chr4_2:63670594-63670613 | None:intergenic | 60.0% | |
!! | CGGGAAGAGCGCCTTAGTTG+AGG | + | chr4_2:63670600-63670619 | Msa0614600:CDS | 60.0% |
CACCACCGACGTGGTTGAAC+TGG | - | chr4_2:63670639-63670658 | None:intergenic | 60.0% | |
CAGTTCAACCACGTCGGTGG+TGG | + | chr4_2:63670637-63670656 | Msa0614600:CDS | 60.0% | |
!!! | TTTTGGTGCCACCACCGACG+TGG | - | chr4_2:63670648-63670667 | None:intergenic | 60.0% |
!!! | AGTAATGGGCCGGCGGGTTT+TGG | - | chr4_2:63670665-63670684 | None:intergenic | 60.0% |
GAGGGACCTGGATTTGGGAG+AGG | - | chr4_2:63670774-63670793 | None:intergenic | 60.0% | |
GGTGCAGGAGCAACTAGTCC+TGG | - | chr4_2:63671122-63671141 | None:intergenic | 60.0% | |
!! | GGACTAGTTGCTCCTGCACC+AGG | + | chr4_2:63671122-63671141 | Msa0614600:CDS | 60.0% |
CCATCAAGCGTAGACGCAGG+CGG | - | chr4_2:63671392-63671411 | None:intergenic | 60.0% | |
GAAGGAGTAGCCCAGTGGCA+TGG | - | chr4_2:63671953-63671972 | None:intergenic | 60.0% | |
!! | AGGAGCATCGGAGCGTGACA+AGG | + | chr4_2:63672488-63672507 | Msa0614600:CDS | 60.0% |
GTGGCCATCAGGTGTTCCTC+AGG | + | chr4_2:63674610-63674629 | Msa0614600:CDS | 60.0% | |
CACGCCTGAGGAACACCTGA+TGG | - | chr4_2:63674617-63674636 | None:intergenic | 60.0% | |
AAGCTCAGTCACGTGGCCTC+TGG | + | chr4_2:63675290-63675309 | Msa0614600:CDS | 60.0% | |
TCACACGCCTTTCGACGCGC+CGG | + | chr4_2:63670549-63670568 | Msa0614600:CDS | 65.0% | |
GTGGTGGCACCAAAACCCGC+CGG | + | chr4_2:63670653-63670672 | Msa0614600:CDS | 65.0% | |
GGCTCGTGCCTGTGCCTGTA+TGG | - | chr4_2:63671162-63671181 | None:intergenic | 65.0% | |
CCGCCTGCGTCTACGCTTGA+TGG | + | chr4_2:63671389-63671408 | Msa0614600:CDS | 65.0% | |
AGGCAGAGGCAACACGCCTG+AGG | - | chr4_2:63674629-63674648 | None:intergenic | 65.0% | |
AGCACAGCCGGCGCGTCGAA+AGG | - | chr4_2:63670559-63670578 | None:intergenic | 70.0% | |
!! | TTTCGACGCGCCGGCTGTGC+TGG | + | chr4_2:63670558-63670577 | Msa0614600:CDS | 70.0% |
TGGCCCACCACCAGCACAGC+CGG | - | chr4_2:63670571-63670590 | None:intergenic | 70.0% | |
GCGTAGACGCAGGCGGCGAA+AGG | - | chr4_2:63671385-63671404 | None:intergenic | 70.0% | |
GTTGCCTGCACGCCTTCGGG+AGG | + | chr4_2:63676305-63676324 | Msa0614600:CDS | 70.0% | |
! | AGGTCCTCCCGAAGGCGTGC+AGG | - | chr4_2:63676312-63676331 | None:intergenic | 70.0% |
!! | GCGCCGGCTGTGCTGGTGGT+GGG | + | chr4_2:63670565-63670584 | Msa0614600:CDS | 75.0% |
!!! | CGACGCGCCGGCTGTGCTGG+TGG | + | chr4_2:63670561-63670580 | Msa0614600:CDS | 80.0% |
!!! | CGCGCCGGCTGTGCTGGTGG+TGG | + | chr4_2:63670564-63670583 | Msa0614600:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 63670316 | 63676886 | 63670316 | ID=Msa0614600;Name=Msa0614600 |
chr4_2 | mRNA | 63670316 | 63676886 | 63670316 | ID=Msa0614600-mRNA-1;Parent=Msa0614600;Name=Msa0614600-mRNA-1;_AED=0.05;_eAED=0.05;_QI=132|0.92|0.93|1|1|1|15|283|738 |
chr4_2 | exon | 63670316 | 63670786 | 63670316 | ID=Msa0614600-mRNA-1:exon:17765;Parent=Msa0614600-mRNA-1 |
chr4_2 | exon | 63671062 | 63671511 | 63671062 | ID=Msa0614600-mRNA-1:exon:17766;Parent=Msa0614600-mRNA-1 |
chr4_2 | exon | 63672206 | 63672339 | 63672206 | ID=Msa0614600-mRNA-1:exon:17767;Parent=Msa0614600-mRNA-1 |
chr4_2 | exon | 63672447 | 63672539 | 63672447 | ID=Msa0614600-mRNA-1:exon:17768;Parent=Msa0614600-mRNA-1 |
chr4_2 | exon | 63672682 | 63672745 | 63672682 | ID=Msa0614600-mRNA-1:exon:17769;Parent=Msa0614600-mRNA-1 |
chr4_2 | exon | 63673010 | 63673058 | 63673010 | ID=Msa0614600-mRNA-1:exon:17770;Parent=Msa0614600-mRNA-1 |
chr4_2 | exon | 63673210 | 63673292 | 63673210 | ID=Msa0614600-mRNA-1:exon:17771;Parent=Msa0614600-mRNA-1 |
chr4_2 | exon | 63673555 | 63673712 | 63673555 | ID=Msa0614600-mRNA-1:exon:17772;Parent=Msa0614600-mRNA-1 |
chr4_2 | exon | 63673800 | 63673860 | 63673800 | ID=Msa0614600-mRNA-1:exon:17773;Parent=Msa0614600-mRNA-1 |
chr4_2 | exon | 63674127 | 63674189 | 63674127 | ID=Msa0614600-mRNA-1:exon:17774;Parent=Msa0614600-mRNA-1 |
chr4_2 | exon | 63674591 | 63674691 | 63674591 | ID=Msa0614600-mRNA-1:exon:17775;Parent=Msa0614600-mRNA-1 |
chr4_2 | exon | 63674916 | 63674973 | 63674916 | ID=Msa0614600-mRNA-1:exon:17776;Parent=Msa0614600-mRNA-1 |
chr4_2 | exon | 63675152 | 63675484 | 63675152 | ID=Msa0614600-mRNA-1:exon:17777;Parent=Msa0614600-mRNA-1 |
chr4_2 | exon | 63676270 | 63676434 | 63676270 | ID=Msa0614600-mRNA-1:exon:17778;Parent=Msa0614600-mRNA-1 |
chr4_2 | exon | 63676538 | 63676886 | 63676538 | ID=Msa0614600-mRNA-1:exon:17779;Parent=Msa0614600-mRNA-1 |
chr4_2 | five_prime_UTR | 63670316 | 63670447 | 63670316 | ID=Msa0614600-mRNA-1:five_prime_utr;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63670448 | 63670786 | 63670448 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63671062 | 63671511 | 63671062 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63672206 | 63672339 | 63672206 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63672447 | 63672539 | 63672447 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63672682 | 63672745 | 63672682 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63673010 | 63673058 | 63673010 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63673210 | 63673292 | 63673210 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63673555 | 63673712 | 63673555 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63673800 | 63673860 | 63673800 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63674127 | 63674189 | 63674127 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63674591 | 63674691 | 63674591 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63674916 | 63674973 | 63674916 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63675152 | 63675484 | 63675152 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63676270 | 63676434 | 63676270 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | CDS | 63676538 | 63676603 | 63676538 | ID=Msa0614600-mRNA-1:cds;Parent=Msa0614600-mRNA-1 |
chr4_2 | three_prime_UTR | 63676604 | 63676886 | 63676604 | ID=Msa0614600-mRNA-1:three_prime_utr;Parent=Msa0614600-mRNA-1 |
Gene Sequence |
Protein sequence |