AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0615090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0615090 MtrunA17_Chr4g0051261 97.727 132 3 0 105 236 163 294 7.25e-94 277
Msa0615090 MtrunA17_Chr4g0051261 99.057 106 1 0 1 106 1 106 1.16e-67 210
Msa0615090 MtrunA17_Chr2g0293491 89.394 132 14 0 105 236 163 294 3.23e-86 257
Msa0615090 MtrunA17_Chr2g0293491 93.396 106 7 0 1 106 1 106 2.82e-63 199
Msa0615090 MtrunA17_Chr6g0483151 37.324 284 121 5 2 229 12 294 3.40e-52 174
Msa0615090 MtrunA17_Chr4g0002001 55.469 128 56 1 105 232 180 306 7.78e-50 165
Msa0615090 MtrunA17_Chr4g0002001 55.660 106 34 2 1 93 1 106 2.46e-28 109
Msa0615090 MtrunA17_Chr8g0377071 36.789 299 121 7 1 232 382 679 9.38e-50 173
Msa0615090 MtrunA17_Chr1g0187371 53.125 128 59 1 105 232 185 311 7.41e-49 162
Msa0615090 MtrunA17_Chr1g0187371 53.061 98 40 2 2 93 16 113 1.89e-26 104
Msa0615090 MtrunA17_Chr8g0358921 33.559 295 133 5 1 232 44 338 1.04e-47 160
Msa0615090 MtrunA17_Chr8g0369451 31.399 293 141 5 1 236 1 290 1.19e-47 163
Msa0615090 MtrunA17_Chr8g0360761 42.268 194 95 3 38 230 8 185 4.46e-46 152
Msa0615090 MtrunA17_Chr3g0122781 35.032 314 121 8 1 232 413 725 4.98e-46 163
Msa0615090 MtrunA17_Chr4g0057791 33.667 300 129 8 1 231 215 513 6.79e-46 160
Msa0615090 MtrunA17_Chr5g0409421 32.082 293 139 7 1 236 1 290 3.79e-45 156
Msa0615090 MtrunA17_Chr3g0141871 31.399 293 137 5 3 232 31 322 2.08e-44 152
Msa0615090 MtrunA17_Chr8g0378831 32.765 293 133 7 3 232 31 322 8.09e-44 151
Msa0615090 MtrunA17_Chr4g0040141 32.753 287 130 7 4 229 129 413 7.13e-43 153
Msa0615090 MtrunA17_Chr7g0273601 32.180 289 133 8 2 229 105 391 3.25e-41 147
Msa0615090 MtrunA17_Chr6g0453711 31.293 294 141 5 2 235 108 400 7.52e-41 147
Msa0615090 MtrunA17_Chr7g0218071 33.218 289 131 7 2 229 118 405 1.08e-40 147
Msa0615090 MtrunA17_Chr7g0248461 28.873 284 141 4 7 229 41 324 1.21e-40 142
Msa0615090 MtrunA17_Chr4g0030151 30.208 288 138 5 10 235 45 331 4.34e-40 141
Msa0615090 MtrunA17_Chr4g0045841 29.329 283 140 4 10 232 61 343 5.50e-40 141
Msa0615090 MtrunA17_Chr8g0339221 31.650 297 136 8 1 236 1 291 1.70e-38 138
Msa0615090 MtrunA17_Chr4g0030231 29.861 288 139 5 7 232 43 329 3.41e-38 136
Msa0615090 MtrunA17_Chr8g0387401 29.268 287 142 4 7 232 55 341 2.26e-37 134
Msa0615090 MtrunA17_Chr5g0397261 29.225 284 140 4 10 232 47 330 2.99e-37 134
Msa0615090 MtrunA17_Chr8g0348481 27.465 284 145 4 7 229 40 323 4.55e-37 133
Msa0615090 MtrunA17_Chr2g0317501 30.822 292 133 7 2 229 132 418 7.00e-34 128
Msa0615090 MtrunA17_Chr3g0093571 48.413 126 64 1 105 229 199 324 7.23e-34 127
Msa0615090 MtrunA17_Chr3g0093571 45.714 105 41 1 4 92 25 129 4.40e-23 97.1
Msa0615090 MtrunA17_Chr3g0093391 47.619 126 65 1 105 229 197 322 1.63e-33 126
Msa0615090 MtrunA17_Chr3g0093391 43.810 105 43 1 4 92 23 127 1.07e-21 93.2
Msa0615090 MtrunA17_Chr3g0130781 46.763 139 60 4 106 230 191 329 6.29e-33 124
Msa0615090 MtrunA17_Chr3g0130781 45.652 92 45 2 1 87 15 106 1.72e-18 83.6
Msa0615090 MtrunA17_Chr3g0099951 30.000 290 142 9 2 232 12 299 1.73e-31 119
Msa0615090 MtrunA17_Chr2g0324461 30.137 292 131 9 4 229 141 425 2.46e-31 121
Msa0615090 MtrunA17_Chr3g0131861 36.842 171 99 4 60 229 219 381 1.92e-30 118
Msa0615090 MtrunA17_Chr3g0131861 47.191 89 43 3 2 87 95 182 2.08e-15 75.1
Msa0615090 MtrunA17_Chr8g0392811 28.667 300 146 7 3 235 116 414 8.31e-29 113
Msa0615090 MtrunA17_Chr2g0286421 38.816 152 88 3 79 229 239 386 9.21e-29 113
Msa0615090 MtrunA17_Chr2g0286421 42.593 108 57 4 2 106 100 205 7.03e-16 76.3
Msa0615090 MtrunA17_Chr8g0385971 37.427 171 98 4 60 229 212 374 1.66e-28 112
Msa0615090 MtrunA17_Chr8g0385971 42.222 90 50 1 4 91 90 179 5.56e-16 76.6
Msa0615090 MtrunA17_Chr4g0061141 36.782 174 101 4 58 230 225 390 1.98e-28 112
Msa0615090 MtrunA17_Chr4g0061141 38.889 108 61 4 2 106 103 208 6.63e-15 73.6
Msa0615090 MtrunA17_Chr3g0102571 40.625 128 75 1 106 232 242 369 4.49e-28 110
Msa0615090 MtrunA17_Chr3g0102571 34.545 110 67 1 3 107 31 140 7.00e-15 73.2
Msa0615090 MtrunA17_Chr4g0066691 36.000 175 103 4 56 229 222 388 1.23e-27 110
Msa0615090 MtrunA17_Chr4g0066691 39.815 108 60 4 2 106 102 207 2.55e-15 74.7
Msa0615090 MtrunA17_Chr1g0201571 29.310 290 138 7 2 229 124 408 2.58e-27 109
Msa0615090 MtrunA17_Chr8g0359091 30.565 301 141 7 2 235 24 323 3.21e-27 108
Msa0615090 MtrunA17_Chr1g0191221 33.523 176 108 4 56 230 240 407 5.38e-27 108
Msa0615090 MtrunA17_Chr1g0191221 41.667 108 58 4 2 106 120 225 1.28e-15 75.5
Msa0615090 MtrunA17_Chr5g0396361 40.476 126 73 2 105 229 300 424 1.10e-26 107
Msa0615090 MtrunA17_Chr5g0396361 43.182 88 48 1 2 87 138 225 2.64e-15 74.7
Msa0615090 MtrunA17_Chr8g0390341 40.310 129 73 3 106 231 288 415 5.12e-26 105
Msa0615090 MtrunA17_Chr6g0486031 39.844 128 75 2 106 231 275 402 6.28e-26 104
Msa0615090 MtrunA17_Chr4g0065851 29.110 292 139 7 8 232 29 319 4.10e-24 100
Msa0615090 MtrunA17_Chr7g0246591 37.594 133 73 4 106 233 302 429 5.60e-24 99.4
Msa0615090 MtrunA17_Chr7g0270371 26.990 289 140 11 10 233 81 363 9.01e-24 98.2
Msa0615090 MtrunA17_Chr2g0287271 29.000 300 145 7 3 235 24 322 1.03e-23 99.0
Msa0615090 MtrunA17_Chr3g0102581 32.075 159 92 3 3 155 5 153 1.90e-23 94.0
Msa0615090 MtrunA17_Chr1g0194201 27.119 295 144 11 4 233 75 363 2.06e-23 97.4
Msa0615090 MtrunA17_Chr2g0284091 25.347 288 146 11 10 233 46 328 4.21e-23 96.3
Msa0615090 MtrunA17_Chr1g0193081 27.018 285 145 9 10 233 81 363 1.92e-22 94.7
Msa0615090 MtrunA17_Chr2g0320011 33.835 133 78 4 106 233 249 376 4.46e-22 93.6
Msa0615090 MtrunA17_Chr8g0350311 33.846 130 82 3 106 233 300 427 8.07e-22 93.2
Msa0615090 MtrunA17_Chr2g0314321 27.586 319 138 8 2 232 23 336 9.07e-22 93.6
Msa0615090 MtrunA17_Chr3g0102601 28.358 201 103 3 72 232 8 207 3.18e-21 89.0
Msa0615090 MtrunA17_Chr5g0443351 28.620 297 144 8 3 232 21 316 9.68e-21 90.1
Msa0615090 MtrunA17_Chr2g0277011 33.582 134 77 5 106 233 251 378 2.27e-20 89.0
Msa0615090 MtrunA17_Chr8g0383451 40.476 126 73 1 105 230 158 281 8.07e-20 87.4
Msa0615090 MtrunA17_Chr8g0383451 36.522 115 65 3 10 122 4 112 1.90e-14 72.0
Msa0615090 MtrunA17_Chr3g0096631 28.571 301 147 8 2 235 23 322 3.63e-19 85.9
Msa0615090 MtrunA17_Chr4g0030241 53.968 63 29 0 106 168 62 124 2.13e-18 79.7
Msa0615090 MtrunA17_Chr6g0482681 38.060 134 78 3 106 235 254 386 8.50e-17 79.0
Msa0615090 MtrunA17_Chr4g0053821 29.193 161 98 4 83 233 224 378 8.07e-16 75.9
Msa0615090 MtrunA17_Chr4g0053951 28.324 173 104 6 71 233 247 409 4.87e-15 73.6
Msa0615090 MtrunA17_Chr5g0401371 26.590 173 107 6 71 233 242 404 1.03e-14 72.8
Msa0615090 MtrunA17_Chr3g0139371 31.288 163 90 5 89 230 238 399 6.02e-14 70.5
Msa0615090 MtrunA17_Chr3g0116701 30.573 157 88 4 93 229 264 419 1.02e-13 69.7
Msa0615090 MtrunA17_Chr8g0378871 33.673 98 63 1 134 229 6 103 4.97e-13 64.7
Msa0615090 MtrunA17_Chr4g0058241 32.667 150 79 5 100 229 276 423 1.32e-12 66.6
Msa0615090 MtrunA17_Chr1g0205421 26.829 205 91 6 1 146 9 213 6.27e-12 64.7
Msa0615090 MtrunA17_Chr5g0419441 37.383 107 62 4 3 107 238 341 6.40e-12 64.7
Msa0615090 MtrunA17_Chr3g0114511 24.042 287 131 10 1 230 29 285 5.02e-11 62.0
Msa0615090 MtrunA17_Chr8g0392821 32.381 105 57 2 123 227 47 137 5.12e-11 60.1
Msa0615090 MtrunA17_Chr8g0369241 51.852 54 25 1 110 163 307 359 7.68e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0615090 AT3G48750.1 78.030 132 29 0 105 236 163 294 7.93e-74 226
Msa0615090 AT3G48750.1 87.736 106 13 0 1 106 1 106 5.89e-59 188
Msa0615090 AT2G38620.4 44.980 249 115 5 1 232 1 244 2.91e-68 211
Msa0615090 AT1G66750.1 39.649 285 115 5 1 229 10 293 8.16e-58 187
Msa0615090 AT1G18040.1 37.324 284 121 5 2 229 10 292 3.37e-56 184
Msa0615090 AT1G73690.1 36.972 284 122 5 2 229 9 291 2.21e-55 182
Msa0615090 AT1G67580.1 36.455 299 122 7 1 232 403 700 1.55e-54 186
Msa0615090 AT1G67580.2 36.455 299 122 7 1 232 403 700 1.55e-54 186
Msa0615090 AT2G38620.2 58.594 128 52 1 105 232 180 306 7.08e-53 173
Msa0615090 AT2G38620.2 57.547 106 32 3 1 93 1 106 1.81e-27 107
Msa0615090 AT1G20930.1 57.812 128 53 1 105 232 183 309 1.05e-52 173
Msa0615090 AT1G20930.1 50.000 118 53 3 1 112 13 130 5.37e-27 105
Msa0615090 AT3G54180.1 57.812 128 53 1 105 232 178 304 7.90e-52 170
Msa0615090 AT3G54180.1 54.808 104 36 2 1 93 1 104 2.42e-27 107
Msa0615090 AT5G63370.2 34.653 303 127 8 1 232 160 462 1.11e-51 174
Msa0615090 AT5G63370.3 34.653 303 127 8 1 232 160 462 1.11e-51 174
Msa0615090 AT1G76540.1 54.688 128 57 1 105 232 181 307 1.02e-50 167
Msa0615090 AT1G76540.1 46.610 118 57 2 1 112 11 128 2.20e-26 104
Msa0615090 AT5G63370.7 34.653 303 127 8 1 232 294 596 1.60e-50 174
Msa0615090 AT5G63370.8 34.653 303 127 8 1 232 294 596 1.60e-50 174
Msa0615090 AT5G63370.4 34.653 303 127 8 1 232 294 596 1.60e-50 174
Msa0615090 AT5G63370.6 34.653 303 127 8 1 232 294 596 1.60e-50 174
Msa0615090 AT5G63370.1 34.653 303 127 8 1 232 294 596 1.60e-50 174
Msa0615090 AT5G63370.9 36.800 250 95 6 1 187 160 409 6.14e-47 160
Msa0615090 AT5G45430.2 31.399 293 141 6 1 236 1 290 1.60e-45 158
Msa0615090 AT5G45430.1 31.399 293 141 6 1 236 1 290 1.62e-45 159
Msa0615090 AT4G10010.2 33.681 288 130 6 2 229 154 440 1.49e-43 155
Msa0615090 AT3G59790.1 32.180 289 133 5 7 232 63 351 1.96e-43 151
Msa0615090 AT1G33770.1 34.028 288 129 6 2 229 139 425 2.94e-41 149
Msa0615090 AT3G45640.1 31.579 285 132 5 10 232 44 327 4.19e-41 144
Msa0615090 AT2G18170.1 31.164 292 139 4 3 232 31 322 4.77e-41 144
Msa0615090 AT5G63370.5 34.800 250 100 7 1 187 294 543 5.42e-41 147
Msa0615090 AT5G63370.10 34.800 250 100 7 1 187 294 543 5.42e-41 147
Msa0615090 AT4G11330.1 30.634 284 136 4 7 229 46 329 8.64e-41 144
Msa0615090 AT1G59580.2 31.142 289 137 4 3 229 31 319 1.03e-40 143
Msa0615090 AT1G59580.1 31.142 289 137 4 3 229 31 319 1.03e-40 143
Msa0615090 AT2G43790.1 30.389 283 137 4 10 232 69 351 1.71e-40 143
Msa0615090 AT1G10210.2 31.142 289 137 5 3 229 31 319 7.57e-40 141
Msa0615090 AT1G10210.3 31.142 289 137 5 3 229 31 319 7.57e-40 141
Msa0615090 AT1G10210.1 31.142 289 137 5 3 229 31 319 7.57e-40 141
Msa0615090 AT4G01370.1 29.893 281 136 4 10 229 49 329 1.49e-39 140
Msa0615090 AT4G13020.7 31.818 286 135 7 1 229 1 283 2.21e-39 140
Msa0615090 AT4G36450.1 30.104 289 143 4 3 232 31 319 2.41e-39 139
Msa0615090 AT4G13020.6 31.818 286 135 7 1 229 1 283 2.71e-39 140
Msa0615090 AT4G13020.4 31.818 286 135 7 1 229 1 283 4.13e-39 140
Msa0615090 AT4G19110.1 28.859 298 142 6 1 236 1 290 5.16e-39 140
Msa0615090 AT4G19110.2 28.859 298 142 6 1 236 1 290 5.56e-39 140
Msa0615090 AT4G13020.1 31.707 287 136 7 1 230 1 284 6.05e-39 140
Msa0615090 AT4G13020.2 31.359 287 137 7 1 230 9 292 6.75e-38 137
Msa0615090 AT4G13020.3 31.359 287 137 7 1 230 9 292 6.85e-38 137
Msa0615090 AT4G13020.8 30.169 295 137 7 1 229 1 292 5.73e-37 134
Msa0615090 AT1G07880.2 28.571 287 144 4 7 232 36 322 6.67e-37 133
Msa0615090 AT4G13020.5 30.068 296 138 7 1 230 1 293 1.71e-36 133
Msa0615090 AT2G46070.1 28.873 284 141 5 7 229 44 327 1.90e-36 132
Msa0615090 AT2G46070.3 28.873 284 141 5 7 229 78 361 3.06e-36 132
Msa0615090 AT3G01085.1 31.959 291 134 8 2 230 113 401 3.83e-35 132
Msa0615090 AT3G01085.2 31.959 291 134 8 2 230 113 401 3.83e-35 132
Msa0615090 AT3G01085.3 31.959 291 134 8 2 230 113 401 4.15e-35 132
Msa0615090 AT5G39420.1 30.450 289 138 7 2 229 103 389 1.58e-34 130
Msa0615090 AT2G46070.2 28.467 274 135 5 7 219 44 317 2.21e-34 125
Msa0615090 AT1G01560.2 28.826 281 139 4 10 229 46 326 2.63e-34 126
Msa0615090 AT1G57700.1 32.881 295 133 8 2 234 144 435 5.58e-34 129
Msa0615090 AT5G10270.1 46.032 126 67 1 105 229 200 325 4.56e-33 125
Msa0615090 AT5G10270.1 45.714 105 41 1 4 92 26 130 8.58e-23 96.7
Msa0615090 AT5G63610.1 46.043 139 61 3 106 230 196 334 6.30e-33 124
Msa0615090 AT5G63610.1 45.556 90 46 2 1 87 22 111 3.12e-16 77.8
Msa0615090 AT1G01560.3 28.102 274 136 4 10 222 46 319 7.92e-33 122
Msa0615090 AT4G22940.1 28.328 293 142 5 2 230 101 389 8.88e-33 124
Msa0615090 AT5G64960.2 44.444 126 69 1 105 229 147 272 1.01e-32 124
Msa0615090 AT5G64960.1 44.444 126 69 1 105 229 200 325 1.44e-32 124
Msa0615090 AT5G64960.1 45.714 105 41 1 4 92 26 130 1.15e-22 96.3
Msa0615090 AT4G22940.2 28.425 292 141 5 3 230 102 389 3.13e-32 123
Msa0615090 AT4G19110.3 37.736 159 93 2 79 236 81 234 1.15e-31 120
Msa0615090 AT1G03740.2 37.736 159 92 3 79 235 350 503 6.59e-29 114
Msa0615090 AT1G03740.2 43.023 86 47 1 4 87 213 298 1.44e-15 75.9
Msa0615090 AT1G03740.1 37.736 159 92 3 79 235 350 503 7.80e-29 114
Msa0615090 AT1G03740.1 43.023 86 47 1 4 87 213 298 1.52e-15 75.9
Msa0615090 AT5G44290.7 38.365 159 91 3 79 235 274 427 2.51e-28 112
Msa0615090 AT5G44290.7 43.023 86 47 1 4 87 137 222 4.81e-16 77.0
Msa0615090 AT5G44290.6 38.365 159 91 3 79 235 274 427 3.22e-28 112
Msa0615090 AT5G44290.6 43.023 86 47 1 4 87 137 222 4.56e-16 77.4
Msa0615090 AT5G44290.2 38.365 159 91 3 79 235 274 427 3.45e-28 112
Msa0615090 AT5G44290.2 43.023 86 47 1 4 87 137 222 6.53e-16 77.0
Msa0615090 AT5G44290.5 38.365 159 91 3 79 235 274 427 3.45e-28 112
Msa0615090 AT5G44290.5 43.023 86 47 1 4 87 137 222 6.53e-16 77.0
Msa0615090 AT5G44290.4 38.365 159 91 3 79 235 274 427 3.45e-28 112
Msa0615090 AT5G44290.4 43.023 86 47 1 4 87 137 222 6.53e-16 77.0
Msa0615090 AT5G44290.1 38.365 159 91 3 79 235 274 427 3.45e-28 112
Msa0615090 AT5G44290.1 43.023 86 47 1 4 87 137 222 6.53e-16 77.0
Msa0615090 AT5G44290.3 38.365 159 91 3 79 235 274 427 3.45e-28 112
Msa0615090 AT5G44290.3 43.023 86 47 1 4 87 137 222 6.53e-16 77.0
Msa0615090 AT2G38620.3 57.547 106 32 3 1 93 1 106 7.49e-28 107
Msa0615090 AT2G38620.3 73.214 56 15 0 105 160 180 235 8.43e-25 99.0
Msa0615090 AT2G38620.1 57.547 106 32 3 1 93 1 106 7.49e-28 107
Msa0615090 AT2G38620.1 73.214 56 15 0 105 160 180 235 8.43e-25 99.0
Msa0615090 AT5G50860.2 36.842 152 91 3 79 229 251 398 1.12e-27 110
Msa0615090 AT5G50860.2 49.425 87 40 3 4 87 114 199 3.55e-16 77.4
Msa0615090 AT4G10010.1 41.270 126 72 2 105 229 136 260 1.20e-27 110
Msa0615090 AT1G09600.1 42.857 126 70 2 105 229 323 447 1.97e-27 110
Msa0615090 AT1G09600.1 40.187 107 61 2 2 106 161 266 3.95e-17 80.5
Msa0615090 AT5G50860.1 36.842 152 91 3 79 229 251 398 2.54e-27 109
Msa0615090 AT5G50860.1 49.425 87 40 3 4 87 114 199 3.78e-16 77.4
Msa0615090 AT3G14720.2 30.508 295 137 7 3 230 24 317 3.37e-27 108
Msa0615090 AT3G14720.3 30.508 295 137 7 3 230 24 317 3.37e-27 108
Msa0615090 AT2G01450.3 29.236 301 143 8 3 235 15 313 5.80e-27 108
Msa0615090 AT2G01450.1 29.236 301 143 8 3 235 15 313 5.80e-27 108
Msa0615090 AT2G01450.2 29.236 301 143 8 3 235 15 313 5.80e-27 108
Msa0615090 AT2G01450.4 29.236 301 143 8 3 235 15 313 5.80e-27 108
Msa0615090 AT1G71530.2 34.503 171 103 4 60 229 269 431 1.55e-26 107
Msa0615090 AT1G71530.2 40.187 107 61 2 2 106 145 250 6.57e-17 79.7
Msa0615090 AT3G14720.1 30.233 301 142 7 2 235 23 322 1.94e-26 107
Msa0615090 AT1G07880.1 29.327 208 88 3 7 155 36 243 2.10e-26 103
Msa0615090 AT1G71530.1 34.503 171 103 4 60 229 269 431 2.60e-26 107
Msa0615090 AT1G71530.1 40.187 107 61 2 2 106 145 250 2.75e-16 77.8
Msa0615090 AT4G28980.3 39.844 128 75 2 106 231 293 420 1.43e-25 104
Msa0615090 AT4G28980.1 39.844 128 75 2 106 231 293 420 1.43e-25 104
Msa0615090 AT4G28980.2 39.844 128 75 2 106 231 293 420 1.43e-25 104
Msa0615090 AT1G74330.3 36.076 158 98 3 79 235 258 413 1.48e-25 104
Msa0615090 AT1G74330.3 39.815 108 60 4 2 106 119 224 1.78e-13 69.7
Msa0615090 AT1G74330.2 36.076 158 98 3 79 235 258 413 1.53e-25 104
Msa0615090 AT1G74330.2 39.815 108 60 4 2 106 119 224 2.41e-13 69.3
Msa0615090 AT1G74330.1 36.076 158 98 3 79 235 258 413 1.66e-25 104
Msa0615090 AT1G74330.1 39.815 108 60 4 2 106 119 224 2.47e-13 69.3
Msa0615090 AT1G18670.3 33.149 181 111 4 58 235 251 424 1.92e-25 104
Msa0615090 AT1G18670.3 41.667 108 58 4 2 106 129 234 2.16e-15 75.5
Msa0615090 AT1G18670.2 32.787 183 113 4 56 235 249 424 1.96e-25 104
Msa0615090 AT1G18670.2 41.667 108 58 4 2 106 129 234 1.44e-15 75.9
Msa0615090 AT1G18670.1 33.149 181 111 4 58 235 251 424 2.23e-25 104
Msa0615090 AT1G18670.1 41.667 108 58 4 2 106 129 234 2.67e-15 75.1
Msa0615090 AT1G71530.3 34.320 169 102 4 60 227 269 429 2.32e-25 103
Msa0615090 AT1G71530.3 40.187 107 61 2 2 106 145 250 6.78e-17 79.3
Msa0615090 AT1G54610.1 39.844 128 71 3 105 229 278 402 2.45e-25 103
Msa0615090 AT1G54610.1 42.202 109 58 4 2 107 116 222 5.59e-16 77.0
Msa0615090 AT1G54610.3 39.844 128 71 3 105 229 278 402 2.45e-25 103
Msa0615090 AT1G54610.3 42.202 109 58 4 2 107 116 222 5.59e-16 77.0
Msa0615090 AT1G54610.2 39.844 128 71 3 105 229 278 402 2.45e-25 103
Msa0615090 AT1G54610.2 42.202 109 58 4 2 107 116 222 5.59e-16 77.0
Msa0615090 AT1G53050.2 38.816 152 88 3 79 229 271 418 3.78e-25 103
Msa0615090 AT1G53050.2 41.667 108 58 4 2 106 132 237 4.06e-15 74.7
Msa0615090 AT1G53050.1 38.816 152 88 3 79 229 271 418 3.78e-25 103
Msa0615090 AT1G53050.1 41.667 108 58 4 2 106 132 237 4.06e-15 74.7
Msa0615090 AT1G53510.1 29.866 298 141 7 2 232 23 319 2.93e-24 101
Msa0615090 AT3G18040.5 28.912 294 141 7 3 229 17 309 1.51e-23 99.0
Msa0615090 AT3G18040.1 28.912 294 141 7 3 229 22 314 1.62e-23 98.6
Msa0615090 AT3G18040.3 28.912 294 141 7 3 229 131 423 2.46e-23 98.6
Msa0615090 AT4G00720.1 27.778 288 139 11 10 233 144 426 2.56e-23 97.8
Msa0615090 AT3G18040.4 28.912 294 141 7 3 229 131 423 2.72e-23 98.2
Msa0615090 AT3G61160.1 37.594 133 73 4 106 233 263 390 3.77e-23 97.1
Msa0615090 AT3G61160.4 37.594 133 73 4 106 233 263 390 4.20e-23 97.1
Msa0615090 AT3G61160.2 37.594 133 73 4 106 233 270 397 4.45e-23 97.1
Msa0615090 AT5G19010.1 29.667 300 143 9 3 235 24 322 1.59e-22 95.9
Msa0615090 AT5G14640.1 35.338 133 76 4 106 233 235 362 2.87e-22 94.7
Msa0615090 AT5G14640.2 35.338 133 76 4 106 233 235 362 2.87e-22 94.7
Msa0615090 AT3G05840.2 26.962 293 135 12 10 233 79 361 3.14e-22 94.4
Msa0615090 AT3G05840.1 26.962 293 135 12 10 233 79 361 3.14e-22 94.4
Msa0615090 AT2G30980.1 26.736 288 142 13 10 233 78 360 3.28e-22 94.4
Msa0615090 AT4G18710.1 32.653 147 88 5 93 233 187 328 6.96e-22 93.2
Msa0615090 AT1G06390.2 33.835 133 78 4 106 233 231 358 1.18e-21 92.8
Msa0615090 AT1G06390.1 33.835 133 78 4 106 233 231 358 1.18e-21 92.8
Msa0615090 AT5G26751.1 26.736 288 142 10 10 233 75 357 1.49e-21 92.4
Msa0615090 AT1G01560.4 27.397 219 93 4 10 162 46 264 8.65e-21 88.6
Msa0615090 AT1G01560.1 27.397 219 93 4 10 162 46 264 8.65e-21 88.6
Msa0615090 AT1G57870.3 34.328 134 76 5 106 233 243 370 1.11e-20 90.5
Msa0615090 AT1G57870.1 34.328 134 76 5 106 233 243 370 1.30e-20 90.1
Msa0615090 AT1G57870.4 34.328 134 76 5 106 233 243 370 1.30e-20 90.1
Msa0615090 AT1G57870.2 34.328 134 76 5 106 233 243 370 1.30e-20 90.1
Msa0615090 AT1G09840.11 34.091 132 79 3 106 233 117 244 1.91e-20 88.2
Msa0615090 AT3G61160.5 38.333 120 64 4 106 220 263 377 2.21e-20 89.0
Msa0615090 AT3G05050.3 42.391 92 50 1 79 170 275 363 2.51e-20 89.7
Msa0615090 AT3G05050.3 39.252 107 62 2 2 106 136 241 1.45e-16 78.6
Msa0615090 AT3G05050.2 42.391 92 50 1 79 170 275 363 2.51e-20 89.7
Msa0615090 AT3G05050.2 39.252 107 62 2 2 106 136 241 1.45e-16 78.6
Msa0615090 AT3G05050.1 42.391 92 50 1 79 170 275 363 2.51e-20 89.7
Msa0615090 AT3G05050.1 39.252 107 62 2 2 106 136 241 1.45e-16 78.6
Msa0615090 AT1G09840.3 34.328 134 76 5 106 233 244 371 4.68e-20 88.6
Msa0615090 AT1G09840.7 34.328 134 76 5 106 233 244 371 4.68e-20 88.6
Msa0615090 AT1G09840.10 34.328 134 76 5 106 233 244 371 4.68e-20 88.6
Msa0615090 AT1G09840.6 34.328 134 76 5 106 233 244 371 4.68e-20 88.6
Msa0615090 AT1G09840.4 34.328 134 76 5 106 233 244 371 4.68e-20 88.6
Msa0615090 AT1G09840.1 34.328 134 76 5 106 233 244 371 4.68e-20 88.6
Msa0615090 AT1G09840.9 34.328 134 76 5 106 233 244 371 4.68e-20 88.6
Msa0615090 AT1G09840.5 34.328 134 76 5 106 233 244 371 4.68e-20 88.6
Msa0615090 AT1G09840.8 34.328 134 76 5 106 233 244 371 4.68e-20 88.6
Msa0615090 AT1G09840.2 34.328 134 76 5 106 233 244 371 4.68e-20 88.6
Msa0615090 AT1G18150.3 28.956 297 143 9 3 232 103 398 3.49e-18 83.6
Msa0615090 AT1G18150.2 28.956 297 143 9 3 232 103 398 3.49e-18 83.6
Msa0615090 AT1G18150.1 28.956 297 143 9 3 232 103 398 3.49e-18 83.6
Msa0615090 AT4G18710.2 35.484 93 55 2 93 180 181 273 1.79e-17 79.7
Msa0615090 AT2G42880.2 39.695 131 74 3 106 232 190 319 1.86e-17 81.3
Msa0615090 AT2G42880.1 39.552 134 76 3 106 235 190 322 1.91e-17 81.3
Msa0615090 AT1G71530.4 40.187 107 61 2 2 106 145 250 4.35e-17 79.7
Msa0615090 AT1G71530.4 36.559 93 52 2 60 152 269 354 8.85e-14 70.1
Msa0615090 AT3G61160.3 40.000 85 48 2 106 189 263 345 7.09e-17 79.0
Msa0615090 AT3G61160.6 40.000 85 48 2 106 189 270 352 7.51e-17 79.0
Msa0615090 AT1G73670.1 35.878 131 79 3 106 232 255 384 1.30e-16 79.0
Msa0615090 AT2G23080.1 24.324 296 156 9 2 233 32 323 4.57e-16 76.3
Msa0615090 AT2G23070.1 29.319 191 110 9 56 233 243 421 7.60e-16 76.3
Msa0615090 AT5G67380.2 28.571 161 99 4 83 233 212 366 1.73e-15 75.1
Msa0615090 AT5G67380.1 28.571 161 99 4 83 233 245 399 1.73e-15 75.1
Msa0615090 AT4G24740.10 33.553 152 77 6 99 229 69 217 1.30e-14 70.9
Msa0615090 AT4G24740.8 33.553 152 77 6 99 229 69 217 1.30e-14 70.9
Msa0615090 AT3G18040.2 35.821 134 81 3 106 235 100 232 1.36e-14 72.8
Msa0615090 AT4G24740.6 31.013 158 86 5 93 229 165 320 3.13e-14 71.2
Msa0615090 AT4G24740.9 31.013 158 86 5 93 229 165 320 3.13e-14 71.2
Msa0615090 AT4G24740.2 31.013 158 86 5 93 229 165 320 3.13e-14 71.2
Msa0615090 AT3G50000.1 27.950 161 100 4 83 233 239 393 4.12e-14 71.2
Msa0615090 AT4G24740.7 33.113 151 79 5 99 229 237 385 8.01e-14 70.5
Msa0615090 AT4G24740.1 33.113 151 79 5 99 229 275 423 8.55e-14 70.5
Msa0615090 AT5G35980.3 26.106 226 99 6 2 163 85 306 7.41e-13 68.2
Msa0615090 AT5G35980.1 26.106 226 99 6 2 163 120 341 9.99e-13 67.8
Msa0615090 AT3G53570.1 32.353 170 78 9 89 229 282 443 1.85e-12 66.6
Msa0615090 AT3G53570.4 32.353 170 78 9 89 229 282 443 1.85e-12 66.6
Msa0615090 AT3G53570.2 32.353 170 78 9 89 229 282 443 1.85e-12 66.6
Msa0615090 AT3G53570.3 32.121 165 76 8 93 229 273 429 2.06e-12 66.2
Msa0615090 AT3G53570.5 32.121 165 76 8 93 229 273 429 2.06e-12 66.2
Msa0615090 AT2G25880.2 24.896 241 127 7 10 226 31 241 4.58e-12 64.3
Msa0615090 AT5G35980.2 48.276 58 29 1 106 163 285 341 7.84e-11 62.0
Msa0615090 AT1G69220.1 41.463 82 45 2 3 83 248 327 8.73e-11 62.0

Find 100 sgRNAs with CRISPR-Local

Find 512 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATTGTGTGTATCATTTA+TGG 0.099756 4_2:-64435273 Msa0615090:three_prime_UTR
CTTGGATCTAAAGAAGTTTA+TGG 0.141131 4_2:-64440224 Msa0615090:CDS
CTGAGTAATATTTAATTTAT+TGG 0.147824 4_2:-64435199 Msa0615090:three_prime_UTR
ATGAATTGTTTAAAATATTC+AGG 0.228595 4_2:-64437056 Msa0615090:intron
CGAGACCCAAGCAATATTTC+TGG 0.257430 4_2:+64437174 None:intergenic
AAAATTAAAATTGAGACTTT+AGG 0.285037 4_2:+64434773 None:intergenic
AGACCAGCTGGCTCCAGATT+TGG 0.292918 4_2:+64436145 None:intergenic
AAGTTTGTCCCATGAGTTCT+TGG 0.304444 4_2:-64435317 Msa0615090:exon
CAGTGAGAAGCGATTGTATC+TGG 0.311780 4_2:-64440263 Msa0615090:CDS
GACCAGCTGGCTCCAGATTT+GGG 0.325114 4_2:+64436146 None:intergenic
TTATTGTGTGTATCATTTAT+GGG 0.330660 4_2:-64435272 Msa0615090:three_prime_UTR
GGAAAGGCTGATTTAAAATC+AGG 0.356830 4_2:+64436282 None:intergenic
TCGAGAGATTTCTCTCTTGA+AGG 0.374074 4_2:-64441354 Msa0615090:CDS
CCCATGAGTTCTTGGCTTCA+CGG 0.378101 4_2:-64435309 Msa0615090:exon
CCCACTGACCAGACATCAAC+CGG 0.380836 4_2:+64437138 None:intergenic
GGCAACTCAAGTCCCAAATC+TGG 0.383130 4_2:-64436158 Msa0615090:CDS
ATCCGTTTAATTACCTTAGC+TGG 0.384470 4_2:+64436252 None:intergenic
CCAGGCCATGTTTCCTCATT+CGG 0.387572 4_2:+64436318 None:intergenic
GCCCCTGGCAGTAATTCTTC+TGG 0.403202 4_2:+64435370 None:intergenic
CAATCAAACAGGAAATTTGC+TGG 0.403354 4_2:+64435093 None:intergenic
TTATGTGGATGGCAGGTTGC+AGG 0.407856 4_2:-64440296 Msa0615090:intron
CTTCAAAGCTATCGTCTCAT+TGG 0.417287 4_2:+64441424 None:intergenic
ATTCTACCCCGGTTGATGTC+TGG 0.428532 4_2:-64437146 Msa0615090:CDS
AAAAGATCAACGGCAAATAA+AGG 0.428931 4_2:-64440182 Msa0615090:intron
GATTTGGGACTTGAGTTGCC+AGG 0.452861 4_2:+64436161 None:intergenic
TGCAGCACAGGAACATTGTT+AGG 0.459484 4_2:-64441328 Msa0615090:intron
TACTTACGGTGTGGTTTACA+AGG 0.472029 4_2:-64441462 Msa0615090:CDS
AGAACAAATGTTACTCCTAC+TGG 0.476332 4_2:-64435032 Msa0615090:three_prime_UTR
TATTAATAGACATTGTTGAA+TGG 0.477084 4_2:-64435062 Msa0615090:three_prime_UTR
TCCGTGAAGCCAAGAACTCA+TGG 0.479432 4_2:+64435308 None:intergenic
AACCAACGGCCACTCTTCCC+AGG 0.481462 4_2:-64437093 Msa0615090:CDS
CCACCAGAAGAATTACTGCC+AGG 0.485050 4_2:-64435373 Msa0615090:CDS
ATCCGTTCATGTCTGTAAGT+TGG 0.487309 4_2:-64434988 Msa0615090:three_prime_UTR
GGATGGCAGGTTGCAGGATG+TGG 0.491666 4_2:-64440290 Msa0615090:intron
ATATTATACATCAATCAAAC+AGG 0.492197 4_2:+64435082 None:intergenic
TTCATGCTCAAGAGCGCCCC+TGG 0.492974 4_2:+64435355 None:intergenic
GAAGAAGATTCGTCTTGAGC+AGG 0.493501 4_2:-64441405 Msa0615090:CDS
TCAGAAATGGGTGCTATCCT+TGG 0.494297 4_2:-64435242 Msa0615090:three_prime_UTR
CTGATTGTATGTTGTTACAT+TGG 0.494493 4_2:+64434830 None:intergenic
ATTCCAGAGTATGCTTCGCT+TGG 0.497139 4_2:-64435399 Msa0615090:intron
TACGAGAAAGTTGAGAAGAT+AGG 0.509181 4_2:-64441491 Msa0615090:CDS
AGTTCTTGGCTTCACGGAAG+AGG 0.511888 4_2:-64435303 Msa0615090:three_prime_UTR
TCGTCTTGAGCAGGAAGATG+AGG 0.512439 4_2:-64441396 Msa0615090:CDS
AGAGCTCCAGAAATATTGCT+TGG 0.515706 4_2:-64437180 Msa0615090:CDS
TGTCTGTGTAACCGTTTCTC+TGG 0.516174 4_2:-64441742 Msa0615090:intron
CCGAATGAGGAAACATGGCC+TGG 0.516871 4_2:-64436318 Msa0615090:CDS
CTTAGCTGGCCACTTGGGAA+AGG 0.522513 4_2:+64436266 None:intergenic
AAGATAGGAGAAGGTACTTA+CGG 0.524164 4_2:-64441476 Msa0615090:CDS
GAGCTCCAGAAATATTGCTT+GGG 0.530039 4_2:-64437179 Msa0615090:CDS
GTTCATTGTATGAAGAATCA+CGG 0.531952 4_2:-64436346 Msa0615090:intron
TCATCAATCTCAGAGTCCCC+TGG 0.536392 4_2:+64437075 None:intergenic
TCAGGCAATGAAGTCACTCC+AGG 0.537614 4_2:+64436300 None:intergenic
ATCAGTGTCGGATTTCGATA+GGG 0.538232 4_2:-64434812 Msa0615090:three_prime_UTR
TCTTGAAGGAAATGCAGCAC+AGG 0.544952 4_2:-64441340 Msa0615090:CDS
CTTTCCCAAGTGGCCAGCTA+AGG 0.545144 4_2:-64436265 Msa0615090:intron
CCCGGTTGATGTCTGGTCAG+TGG 0.549324 4_2:-64437139 Msa0615090:CDS
AATCAGTGTCGGATTTCGAT+AGG 0.549861 4_2:-64434813 Msa0615090:three_prime_UTR
GTCCCAAATCTGGAGCCAGC+TGG 0.550828 4_2:-64436148 Msa0615090:CDS
GTCTCGTCATTATTCTACCC+CGG 0.551414 4_2:-64437157 Msa0615090:CDS
ATCTCTCGAATAGCGGTACT+CGG 0.553067 4_2:+64441368 None:intergenic
ATTACCTTAGCTGGCCACTT+GGG 0.553251 4_2:+64436261 None:intergenic
TTCATTGTATGAAGAATCAC+GGG 0.554208 4_2:-64436345 Msa0615090:intron
AATTACCTTAGCTGGCCACT+TGG 0.560139 4_2:+64436260 None:intergenic
CCGGTTGATGTCTGGTCAGT+GGG 0.567725 4_2:-64437138 Msa0615090:CDS
CTGAGCAGTTACCAGAGAAA+CGG 0.569338 4_2:+64441731 None:intergenic
AAATGTTACTCCTACTGGCA+TGG 0.571965 4_2:-64435027 Msa0615090:three_prime_UTR
CCTGGCAGTAATTCTTCTGG+TGG 0.573704 4_2:+64435373 None:intergenic
CCCCTGGGAAGAGTGGCCGT+TGG 0.575849 4_2:+64437091 None:intergenic
AAAGACTTGACACAGAAAAG+AGG 0.577452 4_2:-64441806 None:intergenic
GATAGAAGATCAAGACCAGC+TGG 0.579493 4_2:+64436133 None:intergenic
AAAGTTGAGAAGATAGGAGA+AGG 0.580820 4_2:-64441485 Msa0615090:CDS
TAATAGACATTGTTGAATGG+TGG 0.582603 4_2:-64435059 Msa0615090:three_prime_UTR
CTGGCAGTAATTCTTCTGGT+GGG 0.588063 4_2:+64435374 None:intergenic
CTATCGTCTCATTGGTAGCA+CGG 0.589040 4_2:+64441432 None:intergenic
CGTCTTGAGCAGGAAGATGA+GGG 0.589280 4_2:-64441395 Msa0615090:CDS
ACCAACGGCCACTCTTCCCA+GGG 0.591025 4_2:-64437092 Msa0615090:CDS
CATCAATCTCAGAGTCCCCT+GGG 0.592251 4_2:+64437076 None:intergenic
AATCACGGGTACACCGAATG+AGG 0.595154 4_2:-64436331 Msa0615090:CDS
CAGAATTTGCAAAAGATCAA+CGG 0.596475 4_2:-64440192 Msa0615090:CDS
TTAAAATTGAGACTTTAGGA+AGG 0.597865 4_2:+64434777 None:intergenic
TCAGAGTCCCCTGGGAAGAG+TGG 0.598076 4_2:+64437084 None:intergenic
CACCAGAAGAATTACTGCCA+GGG 0.599599 4_2:-64435372 Msa0615090:CDS
TTAAATCAGCCTTTCCCAAG+TGG 0.602178 4_2:-64436275 Msa0615090:CDS
GACTTGACACAGAAAAGAGG+CGG 0.632782 4_2:-64441803 None:intergenic
ACTTCTTTAGATCCAAGTCA+AGG 0.632852 4_2:+64440230 None:intergenic
CCGTGAAGCCAAGAACTCAT+GGG 0.632992 4_2:+64435309 None:intergenic
ACCAGAAGAATTACTGCCAG+GGG 0.636649 4_2:-64435371 Msa0615090:CDS
TAACAACATACAATCAGTGT+CGG 0.637433 4_2:-64434824 Msa0615090:three_prime_UTR
AACCAACTTACAGACATGAA+CGG 0.637616 4_2:+64434986 None:intergenic
CCACTGACCAGACATCAACC+GGG 0.641075 4_2:+64437139 None:intergenic
GTACACCGAATGAGGAAACA+TGG 0.643437 4_2:-64436323 Msa0615090:CDS
TTTACATGCTCCATGCCAGT+AGG 0.646558 4_2:+64435017 None:intergenic
GAGAGAAATCTCTCGAATAG+CGG 0.650292 4_2:+64441361 None:intergenic
TACACAGACAGCGCGCCGTG+TGG 0.655054 4_2:+64441755 None:intergenic
AAGCATTGAAGAAAATACCA+AGG 0.669733 4_2:+64435225 None:intergenic
TTGCAGAGATGATAAACCAA+CGG 0.676082 4_2:-64437107 Msa0615090:CDS
AGGAGAAGGTACTTACGGTG+TGG 0.684233 4_2:-64441471 Msa0615090:CDS
AGACTGAGAGAGAGACCACA+CGG 0.716082 4_2:-64441770 Msa0615090:five_prime_UTR
CACTGACCAGACATCAACCG+GGG 0.731811 4_2:+64437140 None:intergenic
CCAACGGCCACTCTTCCCAG+GGG 0.778960 4_2:-64437091 Msa0615090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGAATTATTTAGATTTTT+CGG + chr4_2:64436641-64436660 None:intergenic 10.0%
!!! ATTATTTAAATTTTTTTGGT+GGG + chr4_2:64436750-64436769 None:intergenic 10.0%
!!! AATTATTTAAATTTTTTTGG+TGG + chr4_2:64436751-64436770 None:intergenic 10.0%
!!! TATCATATTTATTTTCAATT+TGG - chr4_2:64437022-64437041 Msa0615090:intron 10.0%
!! CAAAATCTAATAAAATAAAA+AGG + chr4_2:64437155-64437174 None:intergenic 10.0%
!!! CTTTTTATTTTATTAGATTT+TGG - chr4_2:64437153-64437172 Msa0615090:CDS 10.0%
!!! TTATAAAAATTTGAAATGAA+CGG - chr4_2:64437647-64437666 Msa0615090:intron 10.0%
!!! AATTTTCAAATTTAAAAGAA+AGG + chr4_2:64439037-64439056 None:intergenic 10.0%
!! AAATAAATATTTCTCTATTA+TGG - chr4_2:64440482-64440501 Msa0615090:intron 10.0%
!!! TTTTTAAAAAAAATACTTTC+AGG + chr4_2:64441642-64441661 None:intergenic 10.0%
!! TAAATATATTTGTATTATCC+TGG - chr4_2:64435972-64435991 Msa0615090:intron 15.0%
!! ATTAAAAAATCAACGATTAT+AGG - chr4_2:64436530-64436549 Msa0615090:intron 15.0%
!!! TTGAATTATTTAGATTTTTC+GGG + chr4_2:64436640-64436659 None:intergenic 15.0%
!! AATCTAAATAATTCAATTGA+AGG - chr4_2:64436644-64436663 Msa0615090:intron 15.0%
!!! GATTTTATACAATTTTATGT+CGG - chr4_2:64436679-64436698 Msa0615090:intron 15.0%
!!! GATTTTAAACAATTTTTCAA+CGG - chr4_2:64436793-64436812 Msa0615090:intron 15.0%
!! AAAAAAAATGCACAATAAAA+CGG + chr4_2:64437260-64437279 None:intergenic 15.0%
!!! TATAAAAATTTGAAATGAAC+GGG - chr4_2:64437648-64437667 Msa0615090:intron 15.0%
!! ATTATTCAAACATTAAAGTT+AGG + chr4_2:64438507-64438526 None:intergenic 15.0%
!!! ATGAATTGTTTAAAATATTC+AGG - chr4_2:64439492-64439511 Msa0615090:intron 15.0%
!! CTATTAAAAACTGAAAAAAT+TGG + chr4_2:64439702-64439721 None:intergenic 15.0%
!!! ATTTGTAACATATTTTACTA+TGG - chr4_2:64439979-64439998 Msa0615090:intron 15.0%
!! AACTTACATTAATTAATGTT+AGG - chr4_2:64440323-64440342 Msa0615090:intron 15.0%
!! ATACAAAATAAGGTTAAAAT+GGG + chr4_2:64440358-64440377 None:intergenic 15.0%
!! AATACAAAATAAGGTTAAAA+TGG + chr4_2:64440359-64440378 None:intergenic 15.0%
!!! TGATATTTTTCAAATAATGT+AGG - chr4_2:64440459-64440478 Msa0615090:intron 15.0%
!!! AATCAATGAAAAGAATTTTA+AGG + chr4_2:64441086-64441105 None:intergenic 15.0%
!!! CTGAGTAATATTTAATTTAT+TGG - chr4_2:64441349-64441368 Msa0615090:CDS 15.0%
!! AAAATTAAAATTGAGACTTT+AGG + chr4_2:64441778-64441797 None:intergenic 15.0%
!!! TCTCAATTTTAATTTTTATC+AGG - chr4_2:64441782-64441801 Msa0615090:five_prime_UTR 15.0%
!! AAGAGAGATAAAAAAAATCA+GGG + chr4_2:64434884-64434903 None:intergenic 20.0%
!! AAAGAGAGATAAAAAAAATC+AGG + chr4_2:64434885-64434904 None:intergenic 20.0%
!! ATAGTATTATGCTTGAAATT+TGG - chr4_2:64435278-64435297 Msa0615090:three_prime_UTR 20.0%
!!! TTTTTTGTACATTGATGTTA+TGG - chr4_2:64435356-64435375 Msa0615090:CDS 20.0%
!!! AGTTTATCTTGTGTTATTTT+TGG - chr4_2:64435775-64435794 Msa0615090:intron 20.0%
!!! GTTGATTTTTTAATTTTTCC+GGG + chr4_2:64436524-64436543 None:intergenic 20.0%
!!! CGTTGATTTTTTAATTTTTC+CGG + chr4_2:64436525-64436544 None:intergenic 20.0%
!!! GATTTTATACAATTTTGTGT+CGG - chr4_2:64436565-64436584 Msa0615090:intron 20.0%
!!! TTAATTTTTTTGTCAAGAAC+AGG + chr4_2:64436896-64436915 None:intergenic 20.0%
!! AAAAAAATGCACAATAAAAC+GGG + chr4_2:64437259-64437278 None:intergenic 20.0%
!!! AACATGAATGTATTTTATCA+CGG - chr4_2:64437324-64437343 Msa0615090:intron 20.0%
!! AAAAAGTGATGATTTAATAG+TGG - chr4_2:64437351-64437370 Msa0615090:intron 20.0%
!! TTAGTTGTTGTATTAAAGTT+AGG + chr4_2:64437705-64437724 None:intergenic 20.0%
!! TTTAGCATTATAAAACAGTA+AGG + chr4_2:64438556-64438575 None:intergenic 20.0%
!! TGAGAAAATCAATCAAATTA+TGG - chr4_2:64438671-64438690 Msa0615090:intron 20.0%
!!! ATTTTAACATTGGTTTACAT+AGG - chr4_2:64438905-64438924 Msa0615090:intron 20.0%
!! GTGAATAAGTATAAATGTAA+TGG - chr4_2:64439255-64439274 Msa0615090:intron 20.0%
!! AATTCTTTCTGATAAGAATT+TGG - chr4_2:64439564-64439583 Msa0615090:intron 20.0%
!!! TAGAGACTTTTAATGAATTT+AGG + chr4_2:64439602-64439621 None:intergenic 20.0%
!! GTTGATTAATCTTAATGATT+AGG - chr4_2:64439670-64439689 Msa0615090:intron 20.0%
!!! GAAATTTTGATGTAAATTAC+AGG + chr4_2:64439830-64439849 None:intergenic 20.0%
!!! AATGTTTTGTAATCTAGTTT+AGG - chr4_2:64439912-64439931 Msa0615090:intron 20.0%
!!! ATGTTTTGTAATCTAGTTTA+GGG - chr4_2:64439913-64439932 Msa0615090:intron 20.0%
!! ATATGTTACAAATCTCTAAA+AGG + chr4_2:64439972-64439991 None:intergenic 20.0%
!! TTTCCTTCATTTCAAAATAT+AGG - chr4_2:64440003-64440022 Msa0615090:intron 20.0%
!!! AAGCATACATTTTTTTTTAG+AGG + chr4_2:64440167-64440186 None:intergenic 20.0%
!!! AACCTTATTTTGTATTTTGT+AGG - chr4_2:64440363-64440382 Msa0615090:intron 20.0%
!!! ATATTTTGTTATCAATGAAG+AGG - chr4_2:64440531-64440550 Msa0615090:intron 20.0%
!! GTTCATTATAATTGACTAAA+AGG + chr4_2:64440923-64440942 None:intergenic 20.0%
!!! AATGAAAAGAATTTTAAGGA+AGG + chr4_2:64441082-64441101 None:intergenic 20.0%
!! ATTATTGTGTGTATCATTTA+TGG - chr4_2:64441275-64441294 Msa0615090:intron 20.0%
!! TTATTGTGTGTATCATTTAT+GGG - chr4_2:64441276-64441295 Msa0615090:intron 20.0%
!! AAGACATTAAAAAAGGTAAT+AGG + chr4_2:64441417-64441436 None:intergenic 20.0%
!! ATATTATACATCAATCAAAC+AGG + chr4_2:64441469-64441488 None:intergenic 20.0%
!! TATTAATAGACATTGTTGAA+TGG - chr4_2:64441486-64441505 Msa0615090:CDS 20.0%
! GAAGTTTAATGTTTAATGCA+TGG - chr4_2:64435300-64435319 Msa0615090:three_prime_UTR 25.0%
! TTGTTACAGATGAAAAAAGA+TGG - chr4_2:64435408-64435427 Msa0615090:intron 25.0%
!! TGTGCATGTAAAACAATTTT+TGG - chr4_2:64435821-64435840 Msa0615090:intron 25.0%
!! ATGATGTTTCTGATAGTTTA+TGG - chr4_2:64435937-64435956 Msa0615090:intron 25.0%
! ATGTAGAATGATAAAGAACA+CGG + chr4_2:64436052-64436071 None:intergenic 25.0%
! TTTGCTTATTGAGTTAAGTT+TGG - chr4_2:64436226-64436245 Msa0615090:intron 25.0%
!!! ATTTTTTAATTTTTCCGGGT+GGG + chr4_2:64436520-64436539 None:intergenic 25.0%
!!! ATTATTTAGATTTTTCGGGT+GGG + chr4_2:64436636-64436655 None:intergenic 25.0%
!!! AATTATTTAGATTTTTCGGG+TGG + chr4_2:64436637-64436656 None:intergenic 25.0%
!!! TTTATGTCGGTTTTAGATTT+CGG - chr4_2:64436692-64436711 Msa0615090:intron 25.0%
!! TTTTCAACGGTTAATTTTAG+TGG - chr4_2:64436806-64436825 Msa0615090:intron 25.0%
! GTAACTATTGTACCTAATAT+TGG + chr4_2:64437057-64437076 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG + chr4_2:64437816-64437835 None:intergenic 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG - chr4_2:64437823-64437842 Msa0615090:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + chr4_2:64437958-64437977 None:intergenic 25.0%
! GAAAATCAATCAAATTATGG+AGG - chr4_2:64438674-64438693 Msa0615090:intron 25.0%
! AGTTTGATTAAAAGTGGTAA+AGG - chr4_2:64438699-64438718 Msa0615090:intron 25.0%
! GTTTGATTAAAAGTGGTAAA+GGG - chr4_2:64438700-64438719 Msa0615090:intron 25.0%
! TGACAAAATGAGCAAATAAA+CGG + chr4_2:64438814-64438833 None:intergenic 25.0%
!!! ATTGCTGCTAATTTTAACAT+TGG - chr4_2:64438895-64438914 Msa0615090:intron 25.0%
! AAGTATAAATGTAATGGTAG+AGG - chr4_2:64439261-64439280 Msa0615090:intron 25.0%
! AGTATAAATGTAATGGTAGA+GGG - chr4_2:64439262-64439281 Msa0615090:intron 25.0%
! CTAATGAACTGTAAAACTTA+TGG + chr4_2:64439533-64439552 None:intergenic 25.0%
!! AGACTTTTAATGAATTTAGG+AGG + chr4_2:64439599-64439618 None:intergenic 25.0%
! CTACACTTCAATTGTAATTA+TGG - chr4_2:64439619-64439638 Msa0615090:intron 25.0%
! CATTAAGATTAATCAACAGA+TGG + chr4_2:64439667-64439686 None:intergenic 25.0%
! GATTAATCTTAATGATTAGG+AGG - chr4_2:64439673-64439692 Msa0615090:intron 25.0%
!!! ATATATTTTTGCTTCCAAAC+AGG - chr4_2:64440079-64440098 Msa0615090:intron 25.0%
! GTCCTACAAAATACAAAATA+AGG + chr4_2:64440368-64440387 None:intergenic 25.0%
! ATGTTTGATGTTGTAACTTA+CGG + chr4_2:64440440-64440459 None:intergenic 25.0%
! AGAAAAACACATGTATTAGT+TGG - chr4_2:64440763-64440782 Msa0615090:intron 25.0%
! GAAATATTAACCATGCAAAA+CGG - chr4_2:64440875-64440894 Msa0615090:intron 25.0%
!!! TTCTTTTCATTGATTTTCAC+TGG - chr4_2:64441091-64441110 Msa0615090:intron 25.0%
! TGAGACTAAGACATTAAAAA+AGG + chr4_2:64441424-64441443 None:intergenic 25.0%
!! TTTTATCTGCTTTCTCAAAT+TGG - chr4_2:64441583-64441602 Msa0615090:intron 25.0%
!! TTAAAATTGAGACTTTAGGA+AGG + chr4_2:64441774-64441793 None:intergenic 25.0%
AGTGAAATTAGAGAGAATTG+AGG + chr4_2:64434861-64434880 None:intergenic 30.0%
! AACTTTAAGCGTTTTTCTGA+TGG - chr4_2:64434935-64434954 Msa0615090:three_prime_UTR 30.0%
!!! TCTGTGTGATTATTTTGAGA+TGG - chr4_2:64435451-64435470 Msa0615090:intron 30.0%
ATGATGTTGCTGATAGTTTA+TGG - chr4_2:64435489-64435508 Msa0615090:intron 30.0%
TAATATAAGTAGCATTGCAG+CGG + chr4_2:64435556-64435575 None:intergenic 30.0%
!! AACAGCATAAATAGCTTTAG+AGG + chr4_2:64435631-64435650 None:intergenic 30.0%
TATGCTGTTGAGATTATGAT+TGG - chr4_2:64435642-64435661 Msa0615090:intron 30.0%
ACTTAAAACAACATATCCGT+CGG + chr4_2:64435698-64435717 None:intergenic 30.0%
GACAGCATATGAAAAAAAGA+TGG - chr4_2:64435856-64435875 Msa0615090:intron 30.0%
!! CCGAATTTTAACGGTATAAA+CGG + chr4_2:64436105-64436124 None:intergenic 30.0%
CCGTTTATACCGTTAAAATT+CGG - chr4_2:64436102-64436121 Msa0615090:intron 30.0%
TATACCGTTAAAATTCGGAT+TGG - chr4_2:64436107-64436126 Msa0615090:intron 30.0%
ATACCGTTAAAATTCGGATT+GGG - chr4_2:64436108-64436127 Msa0615090:intron 30.0%
AATGGAAACAGCATATCAAA+CGG + chr4_2:64436162-64436181 None:intergenic 30.0%
GACAACAATGTATGAACTAA+TGG + chr4_2:64436180-64436199 None:intergenic 30.0%
TAAAGAACCAGAATATCATG+TGG + chr4_2:64436202-64436221 None:intergenic 30.0%
CTTGGATCTAAAGAAGTTTA+TGG - chr4_2:64436324-64436343 Msa0615090:CDS 30.0%
CAGAATTTGCAAAAGATCAA+CGG - chr4_2:64436356-64436375 Msa0615090:intron 30.0%
AAAAGATCAACGGCAAATAA+AGG - chr4_2:64436366-64436385 Msa0615090:intron 30.0%
TTATTTATGAAGTCGAGTGA+TGG - chr4_2:64436396-64436415 Msa0615090:intron 30.0%
TATTTATGAAGTCGAGTGAT+GGG - chr4_2:64436397-64436416 Msa0615090:intron 30.0%
!!! GATTTTTTAATTTTTCCGGG+TGG + chr4_2:64436521-64436540 None:intergenic 30.0%
!!! TACAATTTTGTGTCGGTTTT+AGG - chr4_2:64436572-64436591 Msa0615090:intron 30.0%
TACATCACTTTGTGGAAATT+TGG + chr4_2:64436609-64436628 None:intergenic 30.0%
!!! CAGCCTTTAGTATTTTGATT+GGG - chr4_2:64436917-64436936 Msa0615090:intron 30.0%
!!! AGCCTTTAGTATTTTGATTG+GGG - chr4_2:64436918-64436937 Msa0615090:intron 30.0%
ATAGTTACTAGTTGATCAGA+AGG - chr4_2:64437069-64437088 Msa0615090:CDS 30.0%
ATGATTTAATAGTGGCAAAG+TGG - chr4_2:64437359-64437378 Msa0615090:intron 30.0%
GCAAAGTGGAACAATTAATT+TGG - chr4_2:64437373-64437392 Msa0615090:intron 30.0%
TTCCTTTATCAAATTCTCTG+TGG - chr4_2:64437429-64437448 Msa0615090:intron 30.0%
AAATTCCAAAAGCCAACATA+TGG + chr4_2:64437612-64437631 None:intergenic 30.0%
!!! ATATGTTGGCTTTTGGAATT+TGG - chr4_2:64437611-64437630 Msa0615090:intron 30.0%
TGGTCTTTGATAGAACATTA+TGG + chr4_2:64437772-64437791 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG - chr4_2:64437776-64437795 Msa0615090:intron 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - chr4_2:64437811-64437830 Msa0615090:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - chr4_2:64437833-64437852 Msa0615090:intron 30.0%
AGCACTTATAGTAGAAAAGT+TGG + chr4_2:64437969-64437988 None:intergenic 30.0%
TACATCATCGTATTCAAACT+GGG + chr4_2:64438234-64438253 None:intergenic 30.0%
GTAACTTCAGTAAAAGAAGT+GGG + chr4_2:64438360-64438379 None:intergenic 30.0%
TGTAACTTCAGTAAAAGAAG+TGG + chr4_2:64438361-64438380 None:intergenic 30.0%
GATCCAACAAATTATAGTCA+GGG + chr4_2:64438629-64438648 None:intergenic 30.0%
GAGGATAGTTTGATTAAAAG+TGG - chr4_2:64438693-64438712 Msa0615090:intron 30.0%
! TCTAGATGATTTTGCTGAAA+TGG - chr4_2:64438769-64438788 Msa0615090:intron 30.0%
! ATTTTGTCAACTCACTTACT+TGG - chr4_2:64438825-64438844 Msa0615090:intron 30.0%
! TTTTGTCAACTCACTTACTT+GGG - chr4_2:64438826-64438845 Msa0615090:intron 30.0%
AAATTAGCAGCAATCCATTA+GGG + chr4_2:64438889-64438908 None:intergenic 30.0%
AAAATTAGCAGCAATCCATT+AGG + chr4_2:64438890-64438909 None:intergenic 30.0%
TTAACTCCCAAATTAACTGA+AGG - chr4_2:64438939-64438958 Msa0615090:intron 30.0%
TAACTCCCAAATTAACTGAA+GGG - chr4_2:64438940-64438959 Msa0615090:intron 30.0%
CAATTCCCTTCAGTTAATTT+GGG + chr4_2:64438948-64438967 None:intergenic 30.0%
AGTTAGATGGATAACAAAAC+AGG + chr4_2:64438998-64439017 None:intergenic 30.0%
CAGTCTCAAAATTAGTTAGA+TGG + chr4_2:64439011-64439030 None:intergenic 30.0%
!! TTTTGCTATGATTTTGTGTC+AGG - chr4_2:64439140-64439159 Msa0615090:intron 30.0%
GTATAAATGTAATGGTAGAG+GGG - chr4_2:64439263-64439282 Msa0615090:intron 30.0%
TTATTCCTATTTGTTCATCG+TGG - chr4_2:64439303-64439322 Msa0615090:intron 30.0%
TAAAACCACGATGAACAAAT+AGG + chr4_2:64439311-64439330 None:intergenic 30.0%
!! TTACTTTTGGCGATTGTTTT+AGG - chr4_2:64439328-64439347 Msa0615090:intron 30.0%
GAAGGATGCAAATAATATGT+AGG - chr4_2:64439785-64439804 Msa0615090:intron 30.0%
!!! TGGCCTATATTTTGAAATGA+AGG + chr4_2:64440009-64440028 None:intergenic 30.0%
TTCATTTCAAAATATAGGCC+AGG - chr4_2:64440008-64440027 Msa0615090:intron 30.0%
TCATTTCAAAATATAGGCCA+GGG - chr4_2:64440009-64440028 Msa0615090:intron 30.0%
GTTCATTGTATGAAGAATCA+CGG - chr4_2:64440202-64440221 Msa0615090:CDS 30.0%
TTCATTGTATGAAGAATCAC+GGG - chr4_2:64440203-64440222 Msa0615090:CDS 30.0%
! ATTTTGTATTTTGTAGGACC+TGG - chr4_2:64440369-64440388 Msa0615090:intron 30.0%
CAAACTAAAGATCCACATTT+CGG - chr4_2:64440733-64440752 Msa0615090:intron 30.0%
TTTCTAATTACTCCGAAATG+TGG + chr4_2:64440748-64440767 None:intergenic 30.0%
AGTTGGAAATGTTTCTCATA+AGG - chr4_2:64440780-64440799 Msa0615090:intron 30.0%
AGATGAACACTGCATTTATT+TGG - chr4_2:64440807-64440826 Msa0615090:intron 30.0%
! TCAGTCATGATTTTACCAAT+TGG - chr4_2:64440947-64440966 Msa0615090:intron 30.0%
! TCGATTTGAACATTACCAAT+TGG + chr4_2:64440965-64440984 None:intergenic 30.0%
!!! ATTTTCACTGGTTCTTACTT+TGG - chr4_2:64441103-64441122 Msa0615090:intron 30.0%
!! AAGCATTGAAGAAAATACCA+AGG + chr4_2:64441326-64441345 None:intergenic 30.0%
! TTGGTATTTTCTTCAATGCT+TGG - chr4_2:64441325-64441344 Msa0615090:intron 30.0%
TAATAGACATTGTTGAATGG+TGG - chr4_2:64441489-64441508 Msa0615090:CDS 30.0%
CTGATTGTATGTTGTTACAT+TGG + chr4_2:64441721-64441740 None:intergenic 30.0%
TAACAACATACAATCAGTGT+CGG - chr4_2:64441724-64441743 Msa0615090:intron 30.0%
TACGAGAAAGTTGAGAAGAT+AGG - chr4_2:64435057-64435076 Msa0615090:three_prime_UTR 35.0%
AAAGTTGAGAAGATAGGAGA+AGG - chr4_2:64435063-64435082 Msa0615090:three_prime_UTR 35.0%
!! AAGATAGGAGAAGGTACTTA+CGG - chr4_2:64435072-64435091 Msa0615090:three_prime_UTR 35.0%
CTGTTGAGATTATGATTGGT+TGG - chr4_2:64435646-64435665 Msa0615090:intron 35.0%
! AGATTATGATTGGTTGGAAC+AGG - chr4_2:64435652-64435671 Msa0615090:intron 35.0%
CTTAAAACAACATATCCGTC+GGG + chr4_2:64435697-64435716 None:intergenic 35.0%
!!! TACGCGTGATTATTTTGAGA+TGG - chr4_2:64435899-64435918 Msa0615090:intron 35.0%
ATCATTCTACATCTGTCTTG+TGG - chr4_2:64436060-64436079 Msa0615090:intron 35.0%
ATGGAAACAGCATATCAAAC+GGG + chr4_2:64436161-64436180 None:intergenic 35.0%
TTGTTGTCCACATGATATTC+TGG - chr4_2:64436192-64436211 Msa0615090:intron 35.0%
GCTTATTGAGTTAAGTTTGG+TGG - chr4_2:64436229-64436248 Msa0615090:intron 35.0%
! AGTTAAGTTTGGTGGTTATG+TGG - chr4_2:64436237-64436256 Msa0615090:intron 35.0%
ACTTCTTTAGATCCAAGTCA+AGG + chr4_2:64436321-64436340 None:intergenic 35.0%
! CGTTGATCTTTTGCAAATTC+TGG + chr4_2:64436358-64436377 None:intergenic 35.0%
! TTGTCCTTTATCGTGTTGAT+TGG - chr4_2:64436430-64436449 Msa0615090:intron 35.0%
!! TGTCCTTTATCGTGTTGATT+GGG - chr4_2:64436431-64436450 Msa0615090:intron 35.0%
!!! TTTGTGTCGGTTTTAGGTTT+CGG - chr4_2:64436578-64436597 Msa0615090:intron 35.0%
ATTTCCACAAAGTGATGTAG+TGG - chr4_2:64436610-64436629 Msa0615090:intron 35.0%
CCAATCAAAATACTAAAGGC+TGG + chr4_2:64436919-64436938 None:intergenic 35.0%
!!! CCAGCCTTTAGTATTTTGAT+TGG - chr4_2:64436916-64436935 Msa0615090:intron 35.0%
AGCCCCAATCAAAATACTAA+AGG + chr4_2:64436923-64436942 None:intergenic 35.0%
TGGCAGCATATTCCAATATT+AGG - chr4_2:64437042-64437061 Msa0615090:intron 35.0%
AATGCACAATAAAACGGGAA+GGG + chr4_2:64437254-64437273 None:intergenic 35.0%
AAATGCACAATAAAACGGGA+AGG + chr4_2:64437255-64437274 None:intergenic 35.0%
CATGTTAATGATGCGTGATA+AGG + chr4_2:64437310-64437329 None:intergenic 35.0%
TGCCACAGAGAATTTGATAA+AGG + chr4_2:64437434-64437453 None:intergenic 35.0%
! AAAGCTTGCAGATTTTGGAT+TGG - chr4_2:64437536-64437555 Msa0615090:intron 35.0%
TCATGTGTAAATGTCCTAAC+AGG + chr4_2:64437579-64437598 None:intergenic 35.0%
TGTTAGGACATTTACACATG+AGG - chr4_2:64437578-64437597 Msa0615090:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG + chr4_2:64437792-64437811 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG + chr4_2:64437804-64437823 None:intergenic 35.0%
AGTCAAGTTAAAAGAGGTAG+AGG + chr4_2:64437863-64437882 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG + chr4_2:64437888-64437907 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG + chr4_2:64437891-64437910 None:intergenic 35.0%
TTGATCTACTCTTCTTACCA+CGG - chr4_2:64437892-64437911 Msa0615090:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG + chr4_2:64437944-64437963 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + chr4_2:64437949-64437968 None:intergenic 35.0%
ACACTAGACATGATAGGATT+AGG + chr4_2:64438021-64438040 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG + chr4_2:64438156-64438175 None:intergenic 35.0%
AACTTTCCTTTCAGCTTAAG+TGG - chr4_2:64438160-64438179 Msa0615090:intron 35.0%
! AAAGTACCACTTAAGCTGAA+AGG + chr4_2:64438169-64438188 None:intergenic 35.0%
GTACATCATCGTATTCAAAC+TGG + chr4_2:64438235-64438254 None:intergenic 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG - chr4_2:64438267-64438286 Msa0615090:intron 35.0%
CTACACGGTTTAGATATCTT+GGG + chr4_2:64438294-64438313 None:intergenic 35.0%
ATATCTAAACCGTGTAGCTT+GGG - chr4_2:64438297-64438316 Msa0615090:intron 35.0%
! TCTCCCTGACTATAATTTGT+TGG - chr4_2:64438623-64438642 Msa0615090:intron 35.0%
GGATCCAACAAATTATAGTC+AGG + chr4_2:64438630-64438649 None:intergenic 35.0%
! TTGATTTTCTCACTAGTCAG+TGG + chr4_2:64438663-64438682 None:intergenic 35.0%
TCTTCTACTAAAGCCTTCTT+TGG + chr4_2:64438729-64438748 None:intergenic 35.0%
CTAGAGAAAGGTCATAATAC+CGG + chr4_2:64438754-64438773 None:intergenic 35.0%
CAGCAAAATCATCTAGAGAA+AGG + chr4_2:64438766-64438785 None:intergenic 35.0%
ATGAGCAAATAAACGGCATA+GGG + chr4_2:64438807-64438826 None:intergenic 35.0%
AATGAGCAAATAAACGGCAT+AGG + chr4_2:64438808-64438827 None:intergenic 35.0%
TTAATTGTCTTTCCCCCTAA+TGG - chr4_2:64438872-64438891 Msa0615090:intron 35.0%
AATTAGCAGCAATCCATTAG+GGG + chr4_2:64438888-64438907 None:intergenic 35.0%
GCAATTCCCTTCAGTTAATT+TGG + chr4_2:64438949-64438968 None:intergenic 35.0%
!! ATGGGAACTCTGAAATCTTA+TGG - chr4_2:64438972-64438991 Msa0615090:intron 35.0%
TGAGTTCTACAAGTAAACAC+AGG - chr4_2:64439083-64439102 Msa0615090:intron 35.0%
GCAAAAGCCAAAAAGAACAA+CGG + chr4_2:64439126-64439145 None:intergenic 35.0%
!! GTTCATCGTGGTTTTACTTT+TGG - chr4_2:64439315-64439334 Msa0615090:intron 35.0%
TTGCAGAGATGATAAACCAA+CGG - chr4_2:64439441-64439460 Msa0615090:intron 35.0%
AACTACCAACCAAATCCAAA+TGG + chr4_2:64439867-64439886 None:intergenic 35.0%
ATGAGGATAAAGCTGGATTT+CGG - chr4_2:64439887-64439906 Msa0615090:intron 35.0%
! TTGTTTGTTACATGCCTGTT+TGG + chr4_2:64440096-64440115 None:intergenic 35.0%
AGAGGAATTATAAGCACACA+AGG + chr4_2:64440149-64440168 None:intergenic 35.0%
! GGAAAGGCTGATTTAAAATC+AGG + chr4_2:64440269-64440288 None:intergenic 35.0%
ATCCGTTTAATTACCTTAGC+TGG + chr4_2:64440299-64440318 None:intergenic 35.0%
AAGATCTACATTAACCCACT+TGG - chr4_2:64440591-64440610 Msa0615090:intron 35.0%
AGATCTACATTAACCCACTT+GGG - chr4_2:64440592-64440611 Msa0615090:intron 35.0%
GTAGCTAAACTGTCACTATT+CGG - chr4_2:64440847-64440866 Msa0615090:intron 35.0%
AAGGTTTGAACTGAAAGGAT+AGG - chr4_2:64440987-64441006 Msa0615090:intron 35.0%
AGGTTTGAACTGAAAGGATA+GGG - chr4_2:64440988-64441007 Msa0615090:intron 35.0%
! TGTTAGTAGATTTGAAGCGA+AGG + chr4_2:64441045-64441064 None:intergenic 35.0%
!!! TATGGGTTTTGACTCAGAAA+TGG - chr4_2:64441293-64441312 Msa0615090:intron 35.0%
!!! ATGGGTTTTGACTCAGAAAT+GGG - chr4_2:64441294-64441313 Msa0615090:intron 35.0%
CAATCAAACAGGAAATTTGC+TGG + chr4_2:64441458-64441477 None:intergenic 35.0%
AGAACAAATGTTACTCCTAC+TGG - chr4_2:64441516-64441535 Msa0615090:intron 35.0%
AACCAACTTACAGACATGAA+CGG + chr4_2:64441565-64441584 None:intergenic 35.0%
! AAGCGTTTTTCTGATGGAAC+AGG - chr4_2:64434941-64434960 Msa0615090:three_prime_UTR 40.0%
TACTTACGGTGTGGTTTACA+AGG - chr4_2:64435086-64435105 Msa0615090:three_prime_UTR 40.0%
CTTCAAAGCTATCGTCTCAT+TGG + chr4_2:64435127-64435146 None:intergenic 40.0%
GAGAGAAATCTCTCGAATAG+CGG + chr4_2:64435190-64435209 None:intergenic 40.0%
TCGAGAGATTTCTCTCTTGA+AGG - chr4_2:64435194-64435213 Msa0615090:three_prime_UTR 40.0%
CGACGGAATCATAAAGAACA+CGG + chr4_2:64435588-64435607 None:intergenic 40.0%
AAACTCCGTGTTTCAACACT+AGG + chr4_2:64435760-64435779 None:intergenic 40.0%
TCTTGTCAATGCTGCATATG+TGG - chr4_2:64435995-64436014 Msa0615090:intron 40.0%
CACGGATCAGACAATTATGT+AGG + chr4_2:64436034-64436053 None:intergenic 40.0%
! CCACCCAATCCGAATTTTAA+CGG + chr4_2:64436114-64436133 None:intergenic 40.0%
TCAAACGGGAATTAAGCAAC+AGG + chr4_2:64436147-64436166 None:intergenic 40.0%
! AAGTTTGGTGGTTATGTGGA+TGG - chr4_2:64436241-64436260 Msa0615090:intron 40.0%
!!! GGTTTTTGAGTACCTTGACT+TGG - chr4_2:64436306-64436325 Msa0615090:CDS 40.0%
!! GTCCTTTATCGTGTTGATTG+GGG - chr4_2:64436432-64436451 Msa0615090:intron 40.0%
CCAGAAATAAAAGTTCGGGT+GGG + chr4_2:64436832-64436851 None:intergenic 40.0%
GGAGCCAGAAATAAAAGTTC+GGG + chr4_2:64436836-64436855 None:intergenic 40.0%
CGGAGCCAGAAATAAAAGTT+CGG + chr4_2:64436837-64436856 None:intergenic 40.0%
! GAATGTGCTTGCTGCTTAAA+AGG - chr4_2:64436963-64436982 Msa0615090:intron 40.0%
TTGAGGCAGGCAATAAAAAG+GGG + chr4_2:64437181-64437200 None:intergenic 40.0%
GTTGAGGCAGGCAATAAAAA+GGG + chr4_2:64437182-64437201 None:intergenic 40.0%
AGTTGAGGCAGGCAATAAAA+AGG + chr4_2:64437183-64437202 None:intergenic 40.0%
AGATACTTGAAAGTTGAGGC+AGG + chr4_2:64437194-64437213 None:intergenic 40.0%
GCTCAGATACTTGAAAGTTG+AGG + chr4_2:64437198-64437217 None:intergenic 40.0%
!!! GCTCTAAAGCTTGCAGATTT+TGG - chr4_2:64437531-64437550 Msa0615090:intron 40.0%
GAGGTTTGTGTACCATATGT+TGG - chr4_2:64437597-64437616 Msa0615090:intron 40.0%
!!! GTGTACCATATGTTGGCTTT+TGG - chr4_2:64437604-64437623 Msa0615090:intron 40.0%
! TAAGCCTTATCCCACTAAGT+GGG - chr4_2:64437722-64437741 Msa0615090:intron 40.0%
GAGGAGAGTCAAGTTAAAAG+AGG + chr4_2:64437869-64437888 None:intergenic 40.0%
ACATCATTAGAGAGAGAGTG+GGG + chr4_2:64437994-64438013 None:intergenic 40.0%
GACATCATTAGAGAGAGAGT+GGG + chr4_2:64437995-64438014 None:intergenic 40.0%
TGACATCATTAGAGAGAGAG+TGG + chr4_2:64437996-64438015 None:intergenic 40.0%
GTGGTAACACTAGACATGAT+AGG + chr4_2:64438027-64438046 None:intergenic 40.0%
TTCAAACTGGGTGGTTGAAA+TGG + chr4_2:64438222-64438241 None:intergenic 40.0%
ATCATCGTATTCAAACTGGG+TGG + chr4_2:64438231-64438250 None:intergenic 40.0%
GGGTCCATAGTACAAAATGA+CGG + chr4_2:64438274-64438293 None:intergenic 40.0%
GCTACACGGTTTAGATATCT+TGG + chr4_2:64438295-64438314 None:intergenic 40.0%
GATATCTAAACCGTGTAGCT+TGG - chr4_2:64438296-64438315 Msa0615090:intron 40.0%
TATCTAAACCGTGTAGCTTG+GGG - chr4_2:64438298-64438317 Msa0615090:intron 40.0%
ATATCATACCCCAAGCTACA+CGG + chr4_2:64438309-64438328 None:intergenic 40.0%
ATCTCCAACTTTCACCTCTA+AGG - chr4_2:64438330-64438349 Msa0615090:intron 40.0%
TCTACCTTAGAGGTGAAAGT+TGG + chr4_2:64438337-64438356 None:intergenic 40.0%
TAGAAGCAAGACGGAGTATA+TGG + chr4_2:64438386-64438405 None:intergenic 40.0%
! CATGATGATGTAGTCTTGCT+TGG + chr4_2:64438484-64438503 None:intergenic 40.0%
! ATTTGTTGGATCCTCCTAGT+AGG - chr4_2:64438637-64438656 Msa0615090:intron 40.0%
TGGTAAAGGGAAACCAAAGA+AGG - chr4_2:64438713-64438732 Msa0615090:intron 40.0%
ATTAGCAGCAATCCATTAGG+GGG + chr4_2:64438887-64438906 None:intergenic 40.0%
AAGATTTCAGAGTTCCCATG+AGG + chr4_2:64438971-64438990 None:intergenic 40.0%
CCAAAAAGAACAACGGACAA+AGG + chr4_2:64439119-64439138 None:intergenic 40.0%
! CCTTTGTCCGTTGTTCTTTT+TGG - chr4_2:64439116-64439135 Msa0615090:intron 40.0%
!!! CTTTTGGCGATTGTTTTAGG+TGG - chr4_2:64439331-64439350 Msa0615090:intron 40.0%
AGAGCTCCAGAAATATTGCT+TGG - chr4_2:64439368-64439387 Msa0615090:intron 40.0%
GAGCTCCAGAAATATTGCTT+GGG - chr4_2:64439369-64439388 Msa0615090:intron 40.0%
ATTATGGCTCAGATGTGTAC+TGG - chr4_2:64439635-64439654 Msa0615090:intron 40.0%
!! AGTGTTGATAGAGATTCCGA+TGG - chr4_2:64439729-64439748 Msa0615090:intron 40.0%
! CAGTACTGAGAATCTTCCAT+CGG + chr4_2:64439748-64439767 None:intergenic 40.0%
! GTATGCAGTACTTTGAGAGA+AGG - chr4_2:64439767-64439786 Msa0615090:intron 40.0%
!! GCTTTGAGACCATTTGGATT+TGG - chr4_2:64439855-64439874 Msa0615090:intron 40.0%
! TGAGACCATTTGGATTTGGT+TGG - chr4_2:64439859-64439878 Msa0615090:intron 40.0%
!! GGATTTGGTTGGTAGTTATG+AGG - chr4_2:64439870-64439889 Msa0615090:intron 40.0%
GGTAGTTATGAGGATAAAGC+TGG - chr4_2:64439880-64439899 Msa0615090:intron 40.0%
TGAGGATAAAGCTGGATTTC+GGG - chr4_2:64439888-64439907 Msa0615090:intron 40.0%
! TAGGGCTTTGTGACAAAAAG+TGG - chr4_2:64439931-64439950 Msa0615090:intron 40.0%
TCGCAATACCAGCAGTATAA+TGG + chr4_2:64440036-64440055 None:intergenic 40.0%
TTAAATCAGCCTTTCCCAAG+TGG - chr4_2:64440273-64440292 Msa0615090:CDS 40.0%
GGCCAGCTAAGGTAATTAAA+CGG - chr4_2:64440294-64440313 Msa0615090:intron 40.0%
! TCAATTTCAGCAGGCTAGTT+TGG - chr4_2:64440687-64440706 Msa0615090:intron 40.0%
AAACTGTCACTATTCGGACA+TGG - chr4_2:64440853-64440872 Msa0615090:intron 40.0%
GGTAATGTTCAAATCGAGCA+AGG - chr4_2:64440968-64440987 Msa0615090:intron 40.0%
AAGCGAAGGACATAAAACAG+AGG + chr4_2:64441031-64441050 None:intergenic 40.0%
!! CTGGTTCTTACTTTGGTTTG+TGG - chr4_2:64441110-64441129 Msa0615090:intron 40.0%
AAGTTTGTCCCATGAGTTCT+TGG - chr4_2:64441231-64441250 Msa0615090:intron 40.0%
AAATGTTACTCCTACTGGCA+TGG - chr4_2:64441521-64441540 Msa0615090:intron 40.0%
ATCCGTTCATGTCTGTAAGT+TGG - chr4_2:64441560-64441579 Msa0615090:intron 40.0%
! AATCAGTGTCGGATTTCGAT+AGG - chr4_2:64441735-64441754 Msa0615090:intron 40.0%
! ATCAGTGTCGGATTTCGATA+GGG - chr4_2:64441736-64441755 Msa0615090:intron 40.0%
TGTCTGTGTAACCGTTTCTC+TGG - chr4_2:64434806-64434825 Msa0615090:three_prime_UTR 45.0%
CTGAGCAGTTACCAGAGAAA+CGG + chr4_2:64434820-64434839 None:intergenic 45.0%
! CTATCGTCTCATTGGTAGCA+CGG + chr4_2:64435119-64435138 None:intergenic 45.0%
GAAGAAGATTCGTCTTGAGC+AGG - chr4_2:64435143-64435162 Msa0615090:three_prime_UTR 45.0%
ATCTCTCGAATAGCGGTACT+CGG + chr4_2:64435183-64435202 None:intergenic 45.0%
TCTTGAAGGAAATGCAGCAC+AGG - chr4_2:64435208-64435227 Msa0615090:three_prime_UTR 45.0%
TGCAGCACAGGAACATTGTT+AGG - chr4_2:64435220-64435239 Msa0615090:three_prime_UTR 45.0%
GCGGCAAATAAGCAACATTG+AGG + chr4_2:64435537-64435556 None:intergenic 45.0%
! TTCCGCCTAGTGTTGAAACA+CGG - chr4_2:64435752-64435771 Msa0615090:intron 45.0%
!! TATGCAGCATTGACAAGACC+AGG + chr4_2:64435993-64436012 None:intergenic 45.0%
! CCGTTAAAATTCGGATTGGG+TGG - chr4_2:64436111-64436130 Msa0615090:intron 45.0%
! AAATTCGGATTGGGTGGAAC+AGG - chr4_2:64436117-64436136 Msa0615090:intron 45.0%
CAGTGAGAAGCGATTGTATC+TGG - chr4_2:64436285-64436304 Msa0615090:CDS 45.0%
!! TATGAAGTCGAGTGATGGGT+TGG - chr4_2:64436401-64436420 Msa0615090:intron 45.0%
AGCCCCAATCAACACGATAA+AGG + chr4_2:64436437-64436456 None:intergenic 45.0%
GGGCTGTTAAGTGCTTAAAG+CGG - chr4_2:64436452-64436471 Msa0615090:intron 45.0%
TGATCCAAATTCCCGCAAAG+TGG - chr4_2:64436716-64436735 Msa0615090:intron 45.0%
TACACCACTTTGCGGGAATT+TGG + chr4_2:64436723-64436742 None:intergenic 45.0%
!! CCCACCCGAACTTTTATTTC+TGG - chr4_2:64436829-64436848 Msa0615090:intron 45.0%
GCCAGAAATAAAAGTTCGGG+TGG + chr4_2:64436833-64436852 None:intergenic 45.0%
! GTGCTTGCTGAAACTGAAGT+AGG - chr4_2:64436866-64436885 Msa0615090:intron 45.0%
AAACGGGAAGGGAAGTTAAC+AGG + chr4_2:64437243-64437262 None:intergenic 45.0%
CGATCAATCAGCAGATTCTG+TGG + chr4_2:64437501-64437520 None:intergenic 45.0%
!!! TTGCAGATTTTGGATTGGCC+AGG - chr4_2:64437541-64437560 Msa0615090:intron 45.0%
!!! TGCAGATTTTGGATTGGCCA+GGG - chr4_2:64437542-64437561 Msa0615090:intron 45.0%
AACAGGAATTCCAAATGCCC+TGG + chr4_2:64437562-64437581 None:intergenic 45.0%
! GGGCATTTGGAATTCCTGTT+AGG - chr4_2:64437562-64437581 Msa0615090:intron 45.0%
! CTAAGCCTTATCCCACTAAG+TGG - chr4_2:64437721-64437740 Msa0615090:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr4_2:64437723-64437742 Msa0615090:intron 45.0%
CATCATTAGAGAGAGAGTGG+GGG + chr4_2:64437993-64438012 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG + chr4_2:64438074-64438093 None:intergenic 45.0%
CGCTTACTTTACTCTCGTGT+TGG - chr4_2:64438077-64438096 Msa0615090:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG + chr4_2:64438113-64438132 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG + chr4_2:64438114-64438133 None:intergenic 45.0%
TCCGTACCATACAACATTGC+CGG - chr4_2:64438118-64438137 Msa0615090:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG + chr4_2:64438122-64438141 None:intergenic 45.0%
CTTATCGCACAAAACACCTG+AGG - chr4_2:64438189-64438208 Msa0615090:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG + chr4_2:64438208-64438227 None:intergenic 45.0%
AAGAAGTGGGTCTACCTTAG+AGG + chr4_2:64438347-64438366 None:intergenic 45.0%
CAACTCACTTACTTGGGTGA+AGG - chr4_2:64438832-64438851 Msa0615090:intron 45.0%
CTTACTTGGGTGAAGGCTAA+TGG - chr4_2:64438839-64438858 Msa0615090:intron 45.0%
AACTGAAGGGAATTGCCTCA+TGG - chr4_2:64438953-64438972 Msa0615090:intron 45.0%
ACTGAAGGGAATTGCCTCAT+GGG - chr4_2:64438954-64438973 Msa0615090:intron 45.0%
!! TGTTTTAGGTGGTGACACTC+TGG - chr4_2:64439342-64439361 Msa0615090:intron 45.0%
CGAGACCCAAGCAATATTTC+TGG + chr4_2:64439377-64439396 None:intergenic 45.0%
GTCTCGTCATTATTCTACCC+CGG - chr4_2:64439391-64439410 Msa0615090:intron 45.0%
!! CTCAGAGCTTTGAGACCATT+TGG - chr4_2:64439849-64439868 Msa0615090:intron 45.0%
! GGCTTTGTGACAAAAAGTGG+AGG - chr4_2:64439934-64439953 Msa0615090:intron 45.0%
GTACACCGAATGAGGAAACA+TGG - chr4_2:64440225-64440244 Msa0615090:CDS 45.0%
ATTACCTTAGCTGGCCACTT+GGG + chr4_2:64440290-64440309 None:intergenic 45.0%
AATTACCTTAGCTGGCCACT+TGG + chr4_2:64440291-64440310 None:intergenic 45.0%
GATAGAAGATCAAGACCAGC+TGG + chr4_2:64440418-64440437 None:intergenic 45.0%
CTACATTAACCCACTTGGGT+TGG - chr4_2:64440596-64440615 Msa0615090:intron 45.0%
ATCAAACCTGAGACCTTGAG+AGG + chr4_2:64440656-64440675 None:intergenic 45.0%
AGCCTGCTGAAATTGACACT+GGG + chr4_2:64440683-64440702 None:intergenic 45.0%
TAGCCTGCTGAAATTGACAC+TGG + chr4_2:64440684-64440703 None:intergenic 45.0%
CGAGCAAGGTTTGAACTGAA+AGG - chr4_2:64440982-64441001 Msa0615090:intron 45.0%
TGAACTGAAAGGATAGGGAG+AGG - chr4_2:64440993-64441012 Msa0615090:intron 45.0%
GAACTGAAAGGATAGGGAGA+GGG - chr4_2:64440994-64441013 Msa0615090:intron 45.0%
ATTCCAGAGTATGCTTCGCT+TGG - chr4_2:64441149-64441168 Msa0615090:intron 45.0%
CTGGCAGTAATTCTTCTGGT+GGG + chr4_2:64441177-64441196 None:intergenic 45.0%
CACCAGAAGAATTACTGCCA+GGG - chr4_2:64441176-64441195 Msa0615090:intron 45.0%
ACCAGAAGAATTACTGCCAG+GGG - chr4_2:64441177-64441196 Msa0615090:intron 45.0%
! TCAGAAATGGGTGCTATCCT+TGG - chr4_2:64441306-64441325 Msa0615090:intron 45.0%
TTTACATGCTCCATGCCAGT+AGG + chr4_2:64441534-64441553 None:intergenic 45.0%
!!! TTGAATTATTTAAATTTTTT+TGG + chr4_2:64436754-64436773 None:intergenic 5.0%
AGACTGAGAGAGAGACCACA+CGG - chr4_2:64434778-64434797 Msa0615090:three_prime_UTR 50.0%
!! AGGAGAAGGTACTTACGGTG+TGG - chr4_2:64435077-64435096 Msa0615090:three_prime_UTR 50.0%
TCGTCTTGAGCAGGAAGATG+AGG - chr4_2:64435152-64435171 Msa0615090:three_prime_UTR 50.0%
CGTCTTGAGCAGGAAGATGA+GGG - chr4_2:64435153-64435172 Msa0615090:three_prime_UTR 50.0%
GCATGGTTTAGCGTGTGACA+TGG - chr4_2:64435317-64435336 Msa0615090:exon 50.0%
ATGATTCCGTCGCTGTCTTG+TGG - chr4_2:64435596-64435615 Msa0615090:intron 50.0%
CATTTGCCACAAGACAGCGA+CGG + chr4_2:64435605-64435624 None:intergenic 50.0%
!! CCTGTTGACTTAAGTCCCGA+CGG - chr4_2:64435679-64435698 Msa0615090:intron 50.0%
CTCCGTGTTTCAACACTAGG+CGG + chr4_2:64435757-64435776 None:intergenic 50.0%
! TTGGTGGTTATGTGGATGGC+AGG - chr4_2:64436245-64436264 Msa0615090:intron 50.0%
TTATGTGGATGGCAGGTTGC+AGG - chr4_2:64436252-64436271 Msa0615090:intron 50.0%
TGGGCCACTACATCACTTTG+TGG + chr4_2:64436617-64436636 None:intergenic 50.0%
ATTCCCGCAAAGTGGTGTAG+TGG - chr4_2:64436724-64436743 Msa0615090:intron 50.0%
!! TTTATTTCTGGCTCCGCCAC+TGG - chr4_2:64436841-64436860 Msa0615090:intron 50.0%
!! TTTGGATTGGCCAGGGCATT+TGG - chr4_2:64437549-64437568 Msa0615090:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr4_2:64437727-64437746 Msa0615090:intron 50.0%
TCTTCTTACCACGGCGTCTA+CGG - chr4_2:64437901-64437920 Msa0615090:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG + chr4_2:64438046-64438065 None:intergenic 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG + chr4_2:64438066-64438085 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG + chr4_2:64438127-64438146 None:intergenic 50.0%
ACTCCGTCTTGCTTCTACTC+AGG - chr4_2:64438389-64438408 Msa0615090:intron 50.0%
GCGGAAACCATACGCTTCTA+AGG - chr4_2:64438411-64438430 Msa0615090:intron 50.0%
! AGGCAAGCCTTAGAAGCGTA+TGG + chr4_2:64438421-64438440 None:intergenic 50.0%
TAAACGGGAGGCTAGAGACT+TGG + chr4_2:64438444-64438463 None:intergenic 50.0%
AGTCGAGGGAGGAGTTAAAC+GGG + chr4_2:64438459-64438478 None:intergenic 50.0%
GAGTCGAGGGAGGAGTTAAA+CGG + chr4_2:64438460-64438479 None:intergenic 50.0%
! AGTCTTGCTTGGTGAGTCGA+GGG + chr4_2:64438473-64438492 None:intergenic 50.0%
! TAGTCTTGCTTGGTGAGTCG+AGG + chr4_2:64438474-64438493 None:intergenic 50.0%
TCACTAGTCAGTGGCCTACT+AGG + chr4_2:64438654-64438673 None:intergenic 50.0%
! ATTCTACCCCGGTTGATGTC+TGG - chr4_2:64439402-64439421 Msa0615090:intron 50.0%
CATCAATCTCAGAGTCCCCT+GGG + chr4_2:64439475-64439494 None:intergenic 50.0%
TCATCAATCTCAGAGTCCCC+TGG + chr4_2:64439476-64439495 None:intergenic 50.0%
ACCAGCAGTATAATGGTCCC+TGG + chr4_2:64440029-64440048 None:intergenic 50.0%
AATCACGGGTACACCGAATG+AGG - chr4_2:64440217-64440236 Msa0615090:CDS 50.0%
CCAGGCCATGTTTCCTCATT+CGG + chr4_2:64440233-64440252 None:intergenic 50.0%
TCAGGCAATGAAGTCACTCC+AGG + chr4_2:64440251-64440270 None:intergenic 50.0%
! GATTTGGGACTTGAGTTGCC+AGG + chr4_2:64440390-64440409 None:intergenic 50.0%
GGCAACTCAAGTCCCAAATC+TGG - chr4_2:64440390-64440409 Msa0615090:intron 50.0%
TCCCCAGTGTCAATTTCAGC+AGG - chr4_2:64440678-64440697 Msa0615090:intron 50.0%
GCCTGCTGAAATTGACACTG+GGG + chr4_2:64440682-64440701 None:intergenic 50.0%
! CCTCGTATCTCCGTTTTGCA+TGG + chr4_2:64440888-64440907 None:intergenic 50.0%
CCATGCAAAACGGAGATACG+AGG - chr4_2:64440885-64440904 Msa0615090:intron 50.0%
GATCCAAGCGAAGCATACTC+TGG + chr4_2:64441155-64441174 None:intergenic 50.0%
CCTGGCAGTAATTCTTCTGG+TGG + chr4_2:64441178-64441197 None:intergenic 50.0%
CCACCAGAAGAATTACTGCC+AGG - chr4_2:64441175-64441194 Msa0615090:intron 50.0%
CCGTGAAGCCAAGAACTCAT+GGG + chr4_2:64441242-64441261 None:intergenic 50.0%
CCCATGAGTTCTTGGCTTCA+CGG - chr4_2:64441239-64441258 Msa0615090:intron 50.0%
TCCGTGAAGCCAAGAACTCA+TGG + chr4_2:64441243-64441262 None:intergenic 50.0%
AGTTCTTGGCTTCACGGAAG+AGG - chr4_2:64441245-64441264 Msa0615090:intron 50.0%
CCGTCGGGACTTAAGTCAAC+AGG + chr4_2:64435682-64435701 None:intergenic 55.0%
GTGCTTAAAGCGGTGCTCAG+TGG - chr4_2:64436462-64436481 Msa0615090:intron 55.0%
CTTAAAGCGGTGCTCAGTGG+CGG - chr4_2:64436465-64436484 Msa0615090:intron 55.0%
! TAATTTTTCCGGGTGGGCCG+TGG + chr4_2:64436514-64436533 None:intergenic 55.0%
TGGGCCACTACACCACTTTG+CGG + chr4_2:64436731-64436750 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr4_2:64437729-64437748 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr4_2:64437735-64437754 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr4_2:64437736-64437755 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr4_2:64437735-64437754 Msa0615090:intron 55.0%
CTTCTTACCACGGCGTCTAC+GGG - chr4_2:64437902-64437921 Msa0615090:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG + chr4_2:64438054-64438073 None:intergenic 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG + chr4_2:64438110-64438129 None:intergenic 55.0%
CTATCGGACAGCAGTCAGAC+CGG + chr4_2:64438140-64438159 None:intergenic 55.0%
CCGCCTGAGTAGAAGCAAGA+CGG + chr4_2:64438395-64438414 None:intergenic 55.0%
CCGTCTTGCTTCTACTCAGG+CGG - chr4_2:64438392-64438411 Msa0615090:intron 55.0%
CTAGTCAGTGGCCTACTAGG+AGG + chr4_2:64438651-64438670 None:intergenic 55.0%
CACTGACCAGACATCAACCG+GGG + chr4_2:64439411-64439430 None:intergenic 55.0%
CCACTGACCAGACATCAACC+GGG + chr4_2:64439412-64439431 None:intergenic 55.0%
CCCACTGACCAGACATCAAC+CGG + chr4_2:64439413-64439432 None:intergenic 55.0%
! CCGGTTGATGTCTGGTCAGT+GGG - chr4_2:64439410-64439429 Msa0615090:intron 55.0%
GCCAGGGACCATTATACTGC+TGG - chr4_2:64440025-64440044 Msa0615090:intron 55.0%
CCGAATGAGGAAACATGGCC+TGG - chr4_2:64440230-64440249 Msa0615090:CDS 55.0%
CTTAGCTGGCCACTTGGGAA+AGG + chr4_2:64440285-64440304 None:intergenic 55.0%
CTTTCCCAAGTGGCCAGCTA+AGG - chr4_2:64440283-64440302 Msa0615090:CDS 55.0%
! GACCAGCTGGCTCCAGATTT+GGG + chr4_2:64440405-64440424 None:intergenic 55.0%
! AGACCAGCTGGCTCCAGATT+TGG + chr4_2:64440406-64440425 None:intergenic 55.0%
!! TTAACCCACTTGGGTTGGCC+TGG - chr4_2:64440601-64440620 Msa0615090:intron 55.0%
ATCACCAGGCCAACCCAAGT+GGG + chr4_2:64440608-64440627 None:intergenic 55.0%
! TTGGCCTGGTGATGTGGCTT+GGG - chr4_2:64440615-64440634 Msa0615090:intron 55.0%
! TGATGTGGCTTGGGACCTTG+AGG - chr4_2:64440624-64440643 Msa0615090:intron 55.0%
! CTTGAGAGGAGCACACCTCA+AGG + chr4_2:64440642-64440661 None:intergenic 55.0%
CTTGAGGTGTGCTCCTCTCA+AGG - chr4_2:64440640-64440659 Msa0615090:intron 55.0%
TGTGCTCCTCTCAAGGTCTC+AGG - chr4_2:64440647-64440666 Msa0615090:intron 55.0%
GCCCCTGGCAGTAATTCTTC+TGG + chr4_2:64441181-64441200 None:intergenic 55.0%
GGATGGCAGGTTGCAGGATG+TGG - chr4_2:64436258-64436277 Msa0615090:intron 60.0%
! TCAGTGGCGGAGCCCTTCAT+GGG - chr4_2:64436478-64436497 Msa0615090:intron 60.0%
GGGCCACTACACCACTTTGC+GGG + chr4_2:64436730-64436749 None:intergenic 60.0%
!! ATTTCTGGCTCCGCCACTGG+CGG - chr4_2:64436844-64436863 Msa0615090:intron 60.0%
! GTTTCAGCAAGCACCGCCAG+TGG + chr4_2:64436860-64436879 None:intergenic 60.0%
ACGGGAGGCTAGAGACTTGG+AGG + chr4_2:64438441-64438460 None:intergenic 60.0%
CGAGGGAGGAGTTAAACGGG+AGG + chr4_2:64438456-64438475 None:intergenic 60.0%
! CTTGCTTGGTGAGTCGAGGG+AGG + chr4_2:64438470-64438489 None:intergenic 60.0%
! CCCGGTTGATGTCTGGTCAG+TGG - chr4_2:64439409-64439428 Msa0615090:intron 60.0%
AACCAACGGCCACTCTTCCC+AGG - chr4_2:64439455-64439474 Msa0615090:intron 60.0%
ACCAACGGCCACTCTTCCCA+GGG - chr4_2:64439456-64439475 Msa0615090:intron 60.0%
TCAGAGTCCCCTGGGAAGAG+TGG + chr4_2:64439467-64439486 None:intergenic 60.0%
! GTCCCAAATCTGGAGCCAGC+TGG - chr4_2:64440400-64440419 Msa0615090:intron 60.0%
CATCACCAGGCCAACCCAAG+TGG + chr4_2:64440609-64440628 None:intergenic 60.0%
!! CTTGGGTTGGCCTGGTGATG+TGG - chr4_2:64440609-64440628 Msa0615090:intron 60.0%
! GTTGGCCTGGTGATGTGGCT+TGG - chr4_2:64440614-64440633 Msa0615090:intron 60.0%
AGGTCCCAAGCCACATCACC+AGG + chr4_2:64440622-64440641 None:intergenic 60.0%
!! TTCATGCTCAAGAGCGCCCC+TGG + chr4_2:64441196-64441215 None:intergenic 60.0%
TACACAGACAGCGCGCCGTG+TGG + chr4_2:64434796-64434815 None:intergenic 65.0%
! CTCAGTGGCGGAGCCCTTCA+TGG - chr4_2:64436477-64436496 Msa0615090:intron 65.0%
!! AGCCCTTCATGGGCTGGGGT+GGG - chr4_2:64436488-64436507 Msa0615090:intron 65.0%
! TCAGCAAGCACCGCCAGTGG+CGG + chr4_2:64436857-64436876 None:intergenic 65.0%
GAGAAGACCCGTAGACGCCG+TGG + chr4_2:64437912-64437931 None:intergenic 65.0%
CCAACGGCCACTCTTCCCAG+GGG - chr4_2:64439457-64439476 Msa0615090:intron 65.0%
TGGCGGAGCCCTTCATGGGC+TGG - chr4_2:64436482-64436501 Msa0615090:intron 70.0%
GGCGGAGCCCTTCATGGGCT+GGG - chr4_2:64436483-64436502 Msa0615090:intron 70.0%
! GCGGAGCCCTTCATGGGCTG+GGG - chr4_2:64436484-64436503 Msa0615090:intron 70.0%
!! GAGCCCTTCATGGGCTGGGG+TGG - chr4_2:64436487-64436506 Msa0615090:intron 70.0%
GGCCCACCCCAGCCCATGAA+GGG + chr4_2:64436493-64436512 None:intergenic 70.0%
TGGCCCACCCCAGCCCATGA+AGG + chr4_2:64436494-64436513 None:intergenic 70.0%
!! TCATGGGCTGGGGTGGGCCA+CGG - chr4_2:64436494-64436513 Msa0615090:intron 70.0%
CCCCTGGGAAGAGTGGCCGT+TGG + chr4_2:64439460-64439479 None:intergenic 70.0%
! GGGGTGGGCCACGGCCCACC+CGG - chr4_2:64436503-64436522 Msa0615090:intron 85.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 64434750 64441820 64434750 ID=Msa0615090;Name=Msa0615090
chr4_2 mRNA 64434750 64441820 64434750 ID=Msa0615090-mRNA-1;Parent=Msa0615090;Name=Msa0615090-mRNA-1;_AED=0.08;_eAED=0.08;_QI=115|0.85|1|1|0.85|0.75|8|575|236
chr4_2 exon 64434750 64435414 64434750 ID=Msa0615090-mRNA-1:exon:18091;Parent=Msa0615090-mRNA-1
chr4_2 exon 64436132 64436185 64436132 ID=Msa0615090-mRNA-1:exon:18090;Parent=Msa0615090-mRNA-1
chr4_2 exon 64436266 64436353 64436266 ID=Msa0615090-mRNA-1:exon:18089;Parent=Msa0615090-mRNA-1
chr4_2 exon 64437057 64437220 64437057 ID=Msa0615090-mRNA-1:exon:18088;Parent=Msa0615090-mRNA-1
chr4_2 exon 64440183 64440303 64440183 ID=Msa0615090-mRNA-1:exon:18087;Parent=Msa0615090-mRNA-1
chr4_2 exon 64441329 64441513 64441329 ID=Msa0615090-mRNA-1:exon:18086;Parent=Msa0615090-mRNA-1
chr4_2 exon 64441608 64441653 64441608 ID=Msa0615090-mRNA-1:exon:18085;Parent=Msa0615090-mRNA-1
chr4_2 exon 64441743 64441820 64441743 ID=Msa0615090-mRNA-1:exon:18084;Parent=Msa0615090-mRNA-1
chr4_2 five_prime_UTR 64441743 64441820 64441743 ID=Msa0615090-mRNA-1:five_prime_utr;Parent=Msa0615090-mRNA-1
chr4_2 five_prime_UTR 64441617 64441653 64441617 ID=Msa0615090-mRNA-1:five_prime_utr;Parent=Msa0615090-mRNA-1
chr4_2 CDS 64441608 64441616 64441608 ID=Msa0615090-mRNA-1:cds;Parent=Msa0615090-mRNA-1
chr4_2 CDS 64441329 64441513 64441329 ID=Msa0615090-mRNA-1:cds;Parent=Msa0615090-mRNA-1
chr4_2 CDS 64440183 64440303 64440183 ID=Msa0615090-mRNA-1:cds;Parent=Msa0615090-mRNA-1
chr4_2 CDS 64437057 64437220 64437057 ID=Msa0615090-mRNA-1:cds;Parent=Msa0615090-mRNA-1
chr4_2 CDS 64436266 64436353 64436266 ID=Msa0615090-mRNA-1:cds;Parent=Msa0615090-mRNA-1
chr4_2 CDS 64436132 64436185 64436132 ID=Msa0615090-mRNA-1:cds;Parent=Msa0615090-mRNA-1
chr4_2 CDS 64435325 64435414 64435325 ID=Msa0615090-mRNA-1:cds;Parent=Msa0615090-mRNA-1
chr4_2 three_prime_UTR 64434750 64435324 64434750 ID=Msa0615090-mRNA-1:three_prime_utr;Parent=Msa0615090-mRNA-1
Gene Sequence

>Msa0615090

ATGGAACAGTACGAGAAAGTTGAGAAGATAGGAGAAGGTACTTACGGTGTGGTTTACAAGGCTCGTGACCGTGCTACCAATGAGACGATAGCTTTGAAGAAGATTCGTCTTGAGCAGGAAGATGAGGGAGTTCCGAGTACCGCTATTCGAGAGATTTCTCTCTTGAAGGAAATGCAGCACAGGAACATTGTTAGGTTGCAGGATGTGGTGCACAGTGAGAAGCGATTGTATCTGGTTTTTGAGTACCTTGACTTGGATCTAAAGAAGTTTATGGATTCATCTCCAGAATTTGCAAAAGATCAACGGCAAATAAAGGTGGTGACACTCTGGTACAGAGCTCCAGAAATATTGCTTGGGTCTCGTCATTATTCTACCCCGGTTGATGTCTGGTCAGTGGGATGCATATTTGCAGAGATGATAAACCAACGGCCACTCTTCCCAGGGGACTCTGAGATTGATGAATTGTTTAAAATATTCAGAATCACGGGTACACCGAATGAGGAAACATGGCCTGGAGTGACTTCATTGCCTGATTTTAAATCAGCCTTTCCCAAGTGGCCAGCTAAGGACCTGGCAACTCAAGTCCCAAATCTGGAGCCAGCTGGTCTTGATCTTCTATCCAGTATGCTTCGCTTGGATCCCACCAGAAGAATTACTGCCAGGGGCGCTCTTGAGCATGAATACTTCAAAGACATTAAGTTTGTCCCATGA
Protein sequence

>Msa0615090

MEQYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKFMDSSPEFAKDQRQIKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMINQRPLFPGDSEIDELFKIFRITGTPNEETWPGVTSLPDFKSAFPKWPAKDLATQVPNLEPAGLDLLSSMLRLDPTRRITARGALEHEYFKDIKFVP*