Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617600 | XP_003630501.1 | 99.031 | 619 | 4 | 1 | 1 | 617 | 1 | 619 | 0.0 | 1263 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617600 | sp|Q8L612|MACP1_ARATH | 44.160 | 625 | 318 | 12 | 7 | 614 | 8 | 618 | 1.45e-178 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617600 | G7LHB4 | 99.031 | 619 | 4 | 1 | 1 | 617 | 1 | 619 | 0.0 | 1263 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0617600 | Msa1306870 | 0.878489 | 2.695077e-69 | -8.615850e-47 |
| Msa0563780 | Msa0617600 | 0.917825 | 3.307748e-86 | -8.615850e-47 |
| Msa0577540 | Msa0617600 | 0.887070 | 1.971062e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617600 | MtrunA17_Chr8g0377631 | 99.031 | 619 | 4 | 1 | 1 | 617 | 1 | 619 | 0.0 | 1263 |
| Msa0617600 | MtrunA17_Chr3g0122211 | 76.741 | 632 | 118 | 7 | 1 | 616 | 1 | 619 | 0.0 | 979 |
| Msa0617600 | MtrunA17_Chr8g0391931 | 45.867 | 617 | 302 | 11 | 3 | 615 | 1 | 589 | 0.0 | 538 |
| Msa0617600 | MtrunA17_Chr2g0277061 | 45.867 | 617 | 291 | 13 | 7 | 614 | 11 | 593 | 0.0 | 531 |
| Msa0617600 | MtrunA17_Chr8g0385121 | 44.698 | 613 | 293 | 12 | 11 | 614 | 13 | 588 | 7.91e-168 | 491 |
| Msa0617600 | MtrunA17_Chr4g0046841 | 42.532 | 616 | 313 | 13 | 11 | 614 | 25 | 611 | 1.02e-162 | 479 |
| Msa0617600 | MtrunA17_Chr4g0013011 | 39.769 | 606 | 330 | 7 | 11 | 616 | 14 | 584 | 1.74e-145 | 434 |
| Msa0617600 | MtrunA17_Chr2g0284691 | 39.706 | 612 | 296 | 9 | 11 | 616 | 22 | 566 | 3.62e-138 | 414 |
| Msa0617600 | MtrunA17_Chr8g0385131 | 36.184 | 608 | 329 | 11 | 11 | 616 | 16 | 566 | 4.71e-119 | 365 |
| Msa0617600 | MtrunA17_Chr8g0385181 | 34.319 | 609 | 326 | 11 | 11 | 616 | 16 | 553 | 6.42e-107 | 333 |
| Msa0617600 | MtrunA17_Chr8g0385161 | 37.544 | 285 | 136 | 6 | 332 | 616 | 2 | 244 | 3.91e-47 | 166 |
| Msa0617600 | MtrunA17_Chr8g0385171 | 33.125 | 320 | 167 | 8 | 11 | 327 | 16 | 291 | 1.01e-46 | 166 |
| Msa0617600 | MtrunA17_Chr7g0274871 | 40.397 | 151 | 71 | 4 | 11 | 159 | 130 | 263 | 3.48e-24 | 102 |
| Msa0617600 | MtrunA17_Chr8g0385141 | 32.773 | 119 | 79 | 1 | 124 | 241 | 12 | 130 | 1.43e-17 | 80.9 |
| Msa0617600 | MtrunA17_Chr8g0385151 | 51.064 | 47 | 23 | 0 | 282 | 328 | 2 | 48 | 9.36e-12 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617600 | AT1G14780.1 | 44.160 | 625 | 318 | 12 | 7 | 614 | 8 | 618 | 1.47e-179 | 523 |
| Msa0617600 | AT4G24290.2 | 44.845 | 611 | 299 | 11 | 10 | 614 | 13 | 591 | 3.77e-179 | 521 |
| Msa0617600 | AT4G24290.3 | 44.845 | 611 | 299 | 11 | 10 | 614 | 13 | 591 | 3.77e-179 | 521 |
| Msa0617600 | AT1G28380.1 | 42.857 | 609 | 320 | 8 | 11 | 614 | 18 | 603 | 2.76e-160 | 473 |
| Msa0617600 | AT1G29690.1 | 39.837 | 615 | 288 | 9 | 9 | 616 | 22 | 561 | 2.82e-144 | 430 |
| Msa0617600 | AT4G24290.1 | 44.940 | 336 | 168 | 7 | 10 | 340 | 13 | 336 | 7.58e-91 | 285 |
Find 189 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACACATCTCCTCCTCTTT+TGG | 0.177147 | 4_2:-68206520 | None:intergenic |
| CAATGTATGGTTAGGGTTAA+AGG | 0.228417 | 4_2:-68204444 | None:intergenic |
| GAGAGTGGCATTGGAATCTT+TGG | 0.230238 | 4_2:+68204555 | Msa0617600:CDS |
| TTAACGTTACGTAACGTTAA+AGG | 0.233271 | 4_2:-68204307 | None:intergenic |
| GGCATTGAAGAATTAAATTT+AGG | 0.254840 | 4_2:+68209922 | Msa0617600:three_prime_UTR |
| AGTTTGCATTGTTGGATTAT+TGG | 0.259496 | 4_2:+68209741 | Msa0617600:CDS |
| GAGAATATTCGGTGTGATAA+AGG | 0.275511 | 4_2:+68204742 | Msa0617600:CDS |
| ATCTGACTGGTTCTAGGAAT+TGG | 0.283000 | 4_2:-68209244 | None:intergenic |
| GCTAGATGTTTCTGAAATAC+TGG | 0.288805 | 4_2:-68206385 | None:intergenic |
| TTCACTGCAATTCTGCTGCT+TGG | 0.301159 | 4_2:+68207194 | Msa0617600:CDS |
| TATTATGCTGCAAATCAAAA+TGG | 0.306003 | 4_2:+68210059 | Msa0617600:three_prime_UTR |
| TGGTTCTAGGAATTGGTTAC+TGG | 0.310420 | 4_2:-68209237 | None:intergenic |
| TTAGGATATACTCCTAGTTC+TGG | 0.310613 | 4_2:+68209940 | Msa0617600:three_prime_UTR |
| TCTTCCATCTGACTGGTTCT+AGG | 0.312397 | 4_2:-68209250 | None:intergenic |
| CATTGGAATCTTTGGGTAAA+GGG | 0.330262 | 4_2:+68204563 | Msa0617600:CDS |
| GAAGAGAGGATCATCTTGTT+TGG | 0.330487 | 4_2:-68209158 | None:intergenic |
| GTGATAAAGGGGATCGAATT+CGG | 0.336226 | 4_2:+68204755 | Msa0617600:CDS |
| TAGTTAATCAATGTATGGTT+AGG | 0.345853 | 4_2:-68204452 | None:intergenic |
| TCACTGCAATTCTGCTGCTT+GGG | 0.347746 | 4_2:+68207195 | Msa0617600:CDS |
| TCGCTTCTGACTGGAATTCC+TGG | 0.348233 | 4_2:+68206621 | Msa0617600:CDS |
| TCAAGCACAGTCACTCAAAT+TGG | 0.363216 | 4_2:+68206541 | Msa0617600:CDS |
| GTTGGATTATTGGTGATTCT+AGG | 0.363354 | 4_2:+68209751 | Msa0617600:exon |
| AACTTGAATATGATCGCTTC+AGG | 0.369856 | 4_2:-68206585 | None:intergenic |
| TTTGGGTAAAGGGTTTGATT+TGG | 0.371576 | 4_2:+68204573 | Msa0617600:CDS |
| GCAGGTAAAGTTTGCATTGT+TGG | 0.373500 | 4_2:+68209733 | Msa0617600:CDS |
| TACTGTAATCAAAGGTGTTT+CGG | 0.379152 | 4_2:+68204720 | Msa0617600:CDS |
| CCGCAATCATTCAACCAGTT+AGG | 0.384521 | 4_2:-68209311 | None:intergenic |
| GGTTGGCCTTCGCTTGTACC+TGG | 0.386698 | 4_2:+68209082 | Msa0617600:CDS |
| TCGTCAAGCATGACCCTAAC+TGG | 0.393408 | 4_2:+68209297 | Msa0617600:CDS |
| TGACTAAGATAGCCACTTCC+AGG | 0.394554 | 4_2:-68206639 | None:intergenic |
| AGAATATTCGGTGTGATAAA+GGG | 0.394686 | 4_2:+68204743 | Msa0617600:CDS |
| AGGAGGCATTTAGAGGATCT+TGG | 0.398026 | 4_2:+68206164 | Msa0617600:CDS |
| AAGGTGTTTCGGAGAATATT+CGG | 0.404078 | 4_2:+68204731 | Msa0617600:CDS |
| CCGATTTCCTCGCTTCTGAC+TGG | 0.404874 | 4_2:+68206612 | Msa0617600:CDS |
| ATTGAGGAATGGAAGATAAG+AGG | 0.406353 | 4_2:-68204243 | None:intergenic |
| ACATAACTAATTGTACTATA+CGG | 0.407090 | 4_2:+68209420 | Msa0617600:CDS |
| AAGAGAGGATCATCTTGTTT+GGG | 0.410103 | 4_2:-68209157 | None:intergenic |
| TTTGAGTATGGAGGTGGAAG+AGG | 0.412109 | 4_2:+68204525 | Msa0617600:exon |
| CTCATGATGCTCCTGGCCAT+TGG | 0.412968 | 4_2:+68209663 | Msa0617600:CDS |
| AATGTATGGTTAGGGTTAAA+GGG | 0.416606 | 4_2:-68204443 | None:intergenic |
| CATGTAAATATCCTTTCAAA+AGG | 0.421252 | 4_2:+68209856 | Msa0617600:three_prime_UTR |
| GGGTGGTAAGATAGGATTGC+AGG | 0.431154 | 4_2:+68209715 | Msa0617600:CDS |
| AGTGCAGTTGGAGCCTGCTT+TGG | 0.431391 | 4_2:-68209548 | None:intergenic |
| GTAGAGCTAATATGAAGCTT+TGG | 0.431914 | 4_2:-68207219 | None:intergenic |
| GGGTGAAGTGAAGAAGATAC+TGG | 0.435581 | 4_2:-68204222 | None:intergenic |
| GGAGGTGTTTACATTGTAAC+TGG | 0.436245 | 4_2:+68209332 | Msa0617600:CDS |
| CGCCACATAGATTGTATGCT+CGG | 0.439529 | 4_2:-68209194 | None:intergenic |
| GTCACTGAGGGTGGTAAGAT+AGG | 0.443404 | 4_2:+68209707 | Msa0617600:CDS |
| CGCAATCATTCAACCAGTTA+GGG | 0.443890 | 4_2:-68209310 | None:intergenic |
| AAAGGGCGAATTGTAATGAT+AGG | 0.445036 | 4_2:+68210026 | Msa0617600:three_prime_UTR |
| GCAGTTGGAGCCTGCTTTGG+TGG | 0.446081 | 4_2:-68209545 | None:intergenic |
| AGATTGTATGCTCGGGGTTG+AGG | 0.450874 | 4_2:-68209186 | None:intergenic |
| TGCTGCTGCTCCACCAAAGC+AGG | 0.451153 | 4_2:+68209535 | Msa0617600:CDS |
| ACAGGCACAGGTGGCCCGTT+AGG | 0.452278 | 4_2:-68209587 | None:intergenic |
| AGATTCCTCCCGGTGATGTC+AGG | 0.452304 | 4_2:+68206144 | Msa0617600:CDS |
| AGTGAAGAAGATACTGGAAA+TGG | 0.453068 | 4_2:-68204216 | None:intergenic |
| TGATGTACTTGAATTCAATC+AGG | 0.454142 | 4_2:+68204786 | Msa0617600:CDS |
| AACATGGGCGCCCATTGCCT+TGG | 0.456623 | 4_2:-68207126 | None:intergenic |
| TGATGTCAGGAGGCATTTAG+AGG | 0.456917 | 4_2:+68206157 | Msa0617600:CDS |
| GGAAGAGGGTATTGAGAGAG+TGG | 0.461485 | 4_2:+68204540 | Msa0617600:CDS |
| GCATTGGAATCTTTGGGTAA+AGG | 0.461487 | 4_2:+68204562 | Msa0617600:CDS |
| TCAAGAGGAAGTAAAGAAAT+CGG | 0.462918 | 4_2:+68205551 | Msa0617600:CDS |
| ATCACACGGTTAAAGACCTC+TGG | 0.464602 | 4_2:-68206339 | None:intergenic |
| AACCCTAGTTAATCAATGTA+TGG | 0.465565 | 4_2:-68204457 | None:intergenic |
| GGGTATTGAGAGAGTGGCAT+TGG | 0.469106 | 4_2:+68204546 | Msa0617600:CDS |
| GCCACATAGATTGTATGCTC+GGG | 0.469485 | 4_2:-68209193 | None:intergenic |
| GTCTTCCTCTGTAGTGAAGA+AGG | 0.470468 | 4_2:-68206215 | None:intergenic |
| TTGAGTATGGAGGTGGAAGA+GGG | 0.472470 | 4_2:+68204526 | Msa0617600:exon |
| ACTATTATTTGCTCCAAAAG+AGG | 0.472552 | 4_2:+68206507 | Msa0617600:CDS |
| TATTGTAAATCTTCGGGAGA+TGG | 0.473016 | 4_2:-68207084 | None:intergenic |
| GAGAATCTCTTCCATCTGAC+TGG | 0.474626 | 4_2:-68209257 | None:intergenic |
| TTGAGGAATGGAAGATAAGA+GGG | 0.477143 | 4_2:-68204242 | None:intergenic |
| GAGAGGCAGTTCGCAAAACA+TGG | 0.481092 | 4_2:-68207142 | None:intergenic |
| TAACCATACATTGATTAACT+AGG | 0.481863 | 4_2:+68204454 | Msa0617600:five_prime_UTR |
| ACTCTGGCATTTATCCTAAC+GGG | 0.485310 | 4_2:+68209573 | Msa0617600:CDS |
| AGTTTCAAATTCCAAGGCAA+TGG | 0.486879 | 4_2:+68207115 | Msa0617600:CDS |
| TCAACGAAAGGAGTTAGCTT+TGG | 0.487036 | 4_2:-68204420 | None:intergenic |
| CGTGGCCCTCATGATGCTCC+TGG | 0.488042 | 4_2:+68209656 | Msa0617600:CDS |
| GGTGGTAAGTGAACAGAAAC+CGG | 0.489122 | 4_2:+68209058 | Msa0617600:intron |
| CCAGTCAGAAGCGAGGAAAT+CGG | 0.490740 | 4_2:-68206612 | None:intergenic |
| GTTTACCTAGACAATGAAGC+TGG | 0.491289 | 4_2:-68205591 | None:intergenic |
| AACCATACATTGATTAACTA+GGG | 0.491332 | 4_2:+68204455 | Msa0617600:five_prime_UTR |
| AGTAGTTTACTCGAGCGAAC+AGG | 0.491644 | 4_2:-68209605 | None:intergenic |
| GTTTCAAATTCCAAGGCAAT+GGG | 0.492656 | 4_2:+68207116 | Msa0617600:CDS |
| AGGTTTGCAAAGGGAATTCG+TGG | 0.497943 | 4_2:+68204613 | Msa0617600:CDS |
| AGTTAATCAATGTATGGTTA+GGG | 0.498421 | 4_2:-68204451 | None:intergenic |
| CTATGTGAGTACCATATGTC+TGG | 0.499457 | 4_2:-68206061 | None:intergenic |
| GCAGCAGAATTGCAGTGAAA+GGG | 0.504493 | 4_2:-68207190 | None:intergenic |
| TTCTGGCCCAAGTAATAATG+AGG | 0.507924 | 4_2:-68210123 | None:intergenic |
| AACTCTGGCATTTATCCTAA+CGG | 0.512099 | 4_2:+68209572 | Msa0617600:CDS |
| GGCAGGTTCATCCAGACATA+TGG | 0.513057 | 4_2:+68206050 | Msa0617600:intron |
| GAAGCTGGATCCCACTGAGC+TGG | 0.519884 | 4_2:-68205576 | None:intergenic |
| TGATGCTCCTGGCCATTGGT+TGG | 0.521972 | 4_2:+68209667 | Msa0617600:CDS |
| AGCAGCAGAATTGCAGTGAA+AGG | 0.525562 | 4_2:-68207191 | None:intergenic |
| TGCTTGATGAACAAAATAAG+AGG | 0.526394 | 4_2:+68204668 | Msa0617600:CDS |
| TTTAGGTTAAGGTTTGCAAA+GGG | 0.527453 | 4_2:+68204604 | Msa0617600:CDS |
| TAATAGTAAAAGTAAGAGGT+TGG | 0.527538 | 4_2:+68204642 | Msa0617600:CDS |
| AACTGCCTCTCAGGCATCAG+CGG | 0.527628 | 4_2:+68207154 | Msa0617600:CDS |
| GACGGCAGATAGCAAACATA+AGG | 0.531482 | 4_2:+68206235 | Msa0617600:CDS |
| ATTATCATAGCTATGCTGCC+TGG | 0.531723 | 4_2:-68210084 | None:intergenic |
| CTGCAAATCAAAATGGATCC+AGG | 0.531911 | 4_2:+68210066 | Msa0617600:three_prime_UTR |
| GGCCTTCGCTTGTACCTGGA+GGG | 0.540226 | 4_2:+68209086 | Msa0617600:CDS |
| AGAGTGGCATTGGAATCTTT+GGG | 0.541778 | 4_2:+68204556 | Msa0617600:CDS |
| ATGCCAGAGTTAAGTGCAGT+TGG | 0.542829 | 4_2:-68209560 | None:intergenic |
| GCTGTAACCAACCAATGGCC+AGG | 0.549195 | 4_2:-68209674 | None:intergenic |
| AGAAATCGGTTCCAGCTCAG+TGG | 0.550705 | 4_2:+68205565 | Msa0617600:CDS |
| AAATGCCTCCTGACATCACC+GGG | 0.554590 | 4_2:-68206152 | None:intergenic |
| CTGACTGGAATTCCTGGAAG+TGG | 0.554762 | 4_2:+68206627 | Msa0617600:CDS |
| ACAGTAGCTCCACCAGCTCC+AGG | 0.554800 | 4_2:-68204703 | None:intergenic |
| GTGGTAGGCATGGCTGTTGG+AGG | 0.555126 | 4_2:+68206083 | Msa0617600:CDS |
| GGGATCCAGCTTCATTGTCT+AGG | 0.555304 | 4_2:+68205586 | Msa0617600:CDS |
| TACTATACGGAAGTCAGAGT+GGG | 0.556869 | 4_2:+68209433 | Msa0617600:CDS |
| TTCTCCGCTTGTACTTCAAG+AGG | 0.563723 | 4_2:+68205536 | Msa0617600:CDS |
| TGGCCTTCGCTTGTACCTGG+AGG | 0.564843 | 4_2:+68209085 | Msa0617600:CDS |
| TTACTCGAGCGAACAGGCAC+AGG | 0.565735 | 4_2:-68209599 | None:intergenic |
| GTAAATTGATGATTGAGGAA+TGG | 0.566932 | 4_2:-68204254 | None:intergenic |
| ACTTCCTCTTGAAGTACAAG+CGG | 0.569301 | 4_2:-68205540 | None:intergenic |
| AATTCCTAGAACCAGTCAGA+TGG | 0.572976 | 4_2:+68209246 | Msa0617600:CDS |
| ACTAAAATATCTCCAGAACT+AGG | 0.573297 | 4_2:-68209952 | None:intergenic |
| TAAATGCCTCCTGACATCAC+CGG | 0.575820 | 4_2:-68206153 | None:intergenic |
| GGAATCGAAATGAAAGTTCG+AGG | 0.575927 | 4_2:-68204353 | None:intergenic |
| GAATTGCAGTGAAAGGGAAG+AGG | 0.576763 | 4_2:-68207184 | None:intergenic |
| GCTCCAACTGCACTTAACTC+TGG | 0.578400 | 4_2:+68209557 | Msa0617600:CDS |
| CTCGAGCGAACAGGCACAGG+TGG | 0.581565 | 4_2:-68209596 | None:intergenic |
| TCTTCCTCTGTAGTGAAGAA+GGG | 0.584229 | 4_2:-68206214 | None:intergenic |
| GCTGCTAAGCTTGTCACTGA+GGG | 0.585435 | 4_2:+68209695 | Msa0617600:CDS |
| GCTAAGCTTGTCACTGAGGG+TGG | 0.587930 | 4_2:+68209698 | Msa0617600:CDS |
| GCTTGATGAACAAAATAAGA+GGG | 0.588156 | 4_2:+68204669 | Msa0617600:CDS |
| TACTCACATAGTGGTAGGCA+TGG | 0.589782 | 4_2:+68206073 | Msa0617600:CDS |
| GAAGGTGGTGAATATTAGAT+CGG | 0.590313 | 4_2:-68204331 | None:intergenic |
| TGCCCTCCAGGTACAAGCGA+AGG | 0.591411 | 4_2:-68209088 | None:intergenic |
| GAATATTCGGTGTGATAAAG+GGG | 0.596081 | 4_2:+68204744 | Msa0617600:CDS |
| AGAGGATCATCTTGTTTGGG+AGG | 0.596904 | 4_2:-68209154 | None:intergenic |
| GACATATGGTACTCACATAG+TGG | 0.597421 | 4_2:+68206064 | Msa0617600:CDS |
| GAAATCGGTTCCAGCTCAGT+GGG | 0.597458 | 4_2:+68205566 | Msa0617600:CDS |
| CATTCATCAAAGATTCCTCC+CGG | 0.599259 | 4_2:+68206134 | Msa0617600:CDS |
| AGAGTGGGGCGCCGCACCAG+AGG | 0.602102 | 4_2:+68209448 | Msa0617600:CDS |
| ATAGTGGTAGGCATGGCTGT+TGG | 0.602545 | 4_2:+68206080 | Msa0617600:CDS |
| TTCCTCCCGGTGATGTCAGG+AGG | 0.603487 | 4_2:+68206147 | Msa0617600:CDS |
| ATTTGATGTCAGCGGCGTCA+CGG | 0.604538 | 4_2:-68205461 | None:intergenic |
| GTGGTAATAGTAAAAGTAAG+AGG | 0.606235 | 4_2:+68204638 | Msa0617600:CDS |
| TACAAGCGAAGGCCAACCAC+CGG | 0.616819 | 4_2:-68209077 | None:intergenic |
| TATGGTACTCACATAGTGGT+AGG | 0.617208 | 4_2:+68206068 | Msa0617600:CDS |
| TTTCTCCGCTGATGCCTGAG+AGG | 0.617256 | 4_2:-68207159 | None:intergenic |
| ATTATTTGCTCCAAAAGAGG+AGG | 0.618881 | 4_2:+68206510 | Msa0617600:CDS |
| CAATGGCCAGGAGCATCATG+AGG | 0.619232 | 4_2:-68209662 | None:intergenic |
| AGCTCATTATCAGAGGGAGT+TGG | 0.620316 | 4_2:+68209360 | Msa0617600:CDS |
| ATGATCGCTTCAGGATTCGA+AGG | 0.621664 | 4_2:-68206576 | None:intergenic |
| AGGGTTAAAGGGTCAACGAA+AGG | 0.622420 | 4_2:-68204432 | None:intergenic |
| CCCCGAGCATACAATCTATG+TGG | 0.622841 | 4_2:+68209192 | Msa0617600:CDS |
| GGTTTGCAAAGGGAATTCGT+GGG | 0.624732 | 4_2:+68204614 | Msa0617600:CDS |
| GGATTATTGGTGATTCTAGG+TGG | 0.626254 | 4_2:+68209754 | Msa0617600:exon |
| AGAGGCAGTTCGCAAAACAT+GGG | 0.626848 | 4_2:-68207141 | None:intergenic |
| TCGAAATGAAAGTTCGAGGA+AGG | 0.628457 | 4_2:-68204349 | None:intergenic |
| GGGTTGAGGCATCTGAAGAG+AGG | 0.631280 | 4_2:-68209172 | None:intergenic |
| CCACATAGATTGTATGCTCG+GGG | 0.631306 | 4_2:-68209192 | None:intergenic |
| TCACACGGTTAAAGACCTCT+GGG | 0.633122 | 4_2:-68206338 | None:intergenic |
| AGTGAACAGAAACCGGTGGT+TGG | 0.633482 | 4_2:+68209065 | Msa0617600:CDS |
| GGTGGAGCTACTGTAATCAA+AGG | 0.633778 | 4_2:+68204712 | Msa0617600:CDS |
| AAATGAAAGTTCGAGGAAGG+TGG | 0.638854 | 4_2:-68204346 | None:intergenic |
| AGCATACAATCTATGTGGCG+AGG | 0.640660 | 4_2:+68209197 | Msa0617600:CDS |
| AGCTGCTAAGCTTGTCACTG+AGG | 0.642027 | 4_2:+68209694 | Msa0617600:CDS |
| GTTTGCAAAGGGAATTCGTG+GGG | 0.645932 | 4_2:+68204615 | Msa0617600:CDS |
| TAGCAGCTGTAACCAACCAA+TGG | 0.649488 | 4_2:-68209679 | None:intergenic |
| GGTGCACAGCTCATTATCAG+AGG | 0.649959 | 4_2:+68209353 | Msa0617600:CDS |
| CCTAACTGGTTGAATGATTG+CGG | 0.650368 | 4_2:+68209311 | Msa0617600:CDS |
| GTGCACAGCTCATTATCAGA+GGG | 0.653438 | 4_2:+68209354 | Msa0617600:CDS |
| AGAGCATTAAAATAGCCAGA+AGG | 0.654613 | 4_2:-68205414 | None:intergenic |
| TGGTGTTTGATTGCATCACA+CGG | 0.656883 | 4_2:-68206353 | None:intergenic |
| TTCTTCACTACAGAGGAAGA+CGG | 0.659925 | 4_2:+68206217 | Msa0617600:CDS |
| AGCAAGATATTTGATGTCAG+CGG | 0.663279 | 4_2:-68205469 | None:intergenic |
| AATGGCCAGGAGCATCATGA+GGG | 0.667616 | 4_2:-68209661 | None:intergenic |
| GAAGCCCTTCTTCACTACAG+AGG | 0.667777 | 4_2:+68206210 | Msa0617600:CDS |
| GTACTATACGGAAGTCAGAG+TGG | 0.671237 | 4_2:+68209432 | Msa0617600:CDS |
| AGTACAGTATACAAAATGAG+TGG | 0.676644 | 4_2:+68209887 | Msa0617600:three_prime_UTR |
| TTTGCAAAGGGAATTCGTGG+GGG | 0.679696 | 4_2:+68204616 | Msa0617600:CDS |
| TAAATACGTCGAGACAGCTG+AGG | 0.683978 | 4_2:+68209628 | Msa0617600:CDS |
| TCTCTATATGTAGGTCCCAG+AGG | 0.687673 | 4_2:+68206323 | Msa0617600:intron |
| GCTTCATATTAGCTCTACAG+AGG | 0.691226 | 4_2:+68207224 | Msa0617600:CDS |
| AGGAATTCCAGTCAGAAGCG+AGG | 0.695982 | 4_2:-68206619 | None:intergenic |
| AATGAGTGGCTGTTGACATG+AGG | 0.699298 | 4_2:+68209901 | Msa0617600:three_prime_UTR |
| GAAAAGGGTAACATAAACTG+CGG | 0.710098 | 4_2:-68204387 | None:intergenic |
| TGAAATACTGGTAAACTGTG+TGG | 0.710464 | 4_2:-68206373 | None:intergenic |
| AACTGGTTGAATGATTGCGG+AGG | 0.722726 | 4_2:+68209314 | Msa0617600:CDS |
| GCAACACTAAATGATAACCA+CGG | 0.728843 | 4_2:-68209804 | None:intergenic |
| GGTAAGTGAACAGAAACCGG+TGG | 0.737124 | 4_2:+68209061 | Msa0617600:CDS |
| ACTATACGGAAGTCAGAGTG+GGG | 0.743094 | 4_2:+68209434 | Msa0617600:CDS |
| TGCCTCCTGACATCACCGGG+AGG | 0.750953 | 4_2:-68206149 | None:intergenic |
| CTGAAGTGATAAGATCACCG+TGG | 0.787954 | 4_2:+68209787 | Msa0617600:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCATTTTGTTATTATTA+AGG | + | chr4_2:68207022-68207041 | Msa0617600:intron | 10.0% |
| !! | TAAAAAATATTGTAAATCTT+CGG | - | chr4_2:68207094-68207113 | None:intergenic | 10.0% |
| !!! | TTTAAAAAGTTGTCTAATTT+TGG | - | chr4_2:68205028-68205047 | None:intergenic | 15.0% |
| !! | AAAAAATATTGTAAATCTTC+GGG | - | chr4_2:68207093-68207112 | None:intergenic | 15.0% |
| !!! | TCTTTTATTTATATATCAAG+TGG | + | chr4_2:68207786-68207805 | Msa0617600:intron | 15.0% |
| !! | TGTAAAAAATGTTAAGAAAA+GGG | + | chr4_2:68210009-68210028 | Msa0617600:three_prime_UTR | 15.0% |
| !!! | TGTTTTGTTTTGTTTTGTTT+TGG | - | chr4_2:68204279-68204298 | None:intergenic | 20.0% |
| !! | AAAAATCAGAACAAAAAAAC+AGG | - | chr4_2:68204501-68204520 | None:intergenic | 20.0% |
| !!! | TGATTTTTCATTTTTGAGTA+TGG | + | chr4_2:68204513-68204532 | Msa0617600:exon | 20.0% |
| !!! | TGTTATTTGAATGTCAAATT+TGG | + | chr4_2:68204998-68205017 | Msa0617600:intron | 20.0% |
| !! | GTTATTTGAATGTCAAATTT+GGG | + | chr4_2:68204999-68205018 | Msa0617600:intron | 20.0% |
| !! | GTTAATCATGTTTAAATTTG+TGG | + | chr4_2:68205098-68205117 | Msa0617600:intron | 20.0% |
| !! | ATGAAATGGTAGATTATATT+TGG | - | chr4_2:68205139-68205158 | None:intergenic | 20.0% |
| !! | ATATCAATGATTAAGAAATC+TGG | + | chr4_2:68205281-68205300 | Msa0617600:intron | 20.0% |
| !! | TATCAATGATTAAGAAATCT+GGG | + | chr4_2:68205282-68205301 | Msa0617600:intron | 20.0% |
| !! | CAAAAATACTAAATCTTGTA+GGG | - | chr4_2:68205779-68205798 | None:intergenic | 20.0% |
| !!! | AATCAGATTCTTTTATCAAT+TGG | - | chr4_2:68205817-68205836 | None:intergenic | 20.0% |
| !!! | TTTGAATGATGTGTAATTTT+GGG | + | chr4_2:68205994-68206013 | Msa0617600:intron | 20.0% |
| !! | GAAACAAAAAATTCATATTG+AGG | - | chr4_2:68206283-68206302 | None:intergenic | 20.0% |
| !! | AATACTAATAAACCTAAACT+GGG | - | chr4_2:68206731-68206750 | None:intergenic | 20.0% |
| !! | AAATACTAATAAACCTAAAC+TGG | - | chr4_2:68206732-68206751 | None:intergenic | 20.0% |
| !!! | AAAACATATTAGTTTTTCTG+TGG | - | chr4_2:68206922-68206941 | None:intergenic | 20.0% |
| !!! | ACAGAAAAACTAATATGTTT+TGG | + | chr4_2:68206921-68206940 | Msa0617600:intron | 20.0% |
| !!! | TCTAATAAGTATTGAAGTTT+AGG | + | chr4_2:68207645-68207664 | Msa0617600:intron | 20.0% |
| !! | AGAAAAAATAACTAGTTGAT+GGG | - | chr4_2:68208159-68208178 | None:intergenic | 20.0% |
| !! | TGTATTAATCTTAGTGATAT+TGG | - | chr4_2:68208255-68208274 | None:intergenic | 20.0% |
| !! | TATATCTAGTAACTTGAAAA+GGG | + | chr4_2:68208642-68208661 | Msa0617600:intron | 20.0% |
| !! | AACTTACCTATAAAAATGAA+AGG | - | chr4_2:68208994-68209013 | None:intergenic | 20.0% |
| !!! | TTATGGTATTTTGTACAAAA+TGG | + | chr4_2:68209033-68209052 | Msa0617600:intron | 20.0% |
| !! | ACATAACTAATTGTACTATA+CGG | + | chr4_2:68209420-68209439 | Msa0617600:CDS | 20.0% |
| !! | CTGTAAAAAATGTTAAGAAA+AGG | + | chr4_2:68210008-68210027 | Msa0617600:three_prime_UTR | 20.0% |
| !!! | TTTTGGTAAATTGATGATTG+AGG | - | chr4_2:68204262-68204281 | None:intergenic | 25.0% |
| ! | AGTTAATCAATGTATGGTTA+GGG | - | chr4_2:68204454-68204473 | None:intergenic | 25.0% |
| ! | TAGTTAATCAATGTATGGTT+AGG | - | chr4_2:68204455-68204474 | None:intergenic | 25.0% |
| !! | TAACCATACATTGATTAACT+AGG | + | chr4_2:68204454-68204473 | Msa0617600:five_prime_UTR | 25.0% |
| !! | AACCATACATTGATTAACTA+GGG | + | chr4_2:68204455-68204474 | Msa0617600:five_prime_UTR | 25.0% |
| !!! | TTTTTCATTTTTGAGTATGG+AGG | + | chr4_2:68204516-68204535 | Msa0617600:exon | 25.0% |
| ! | TAATAGTAAAAGTAAGAGGT+TGG | + | chr4_2:68204642-68204661 | Msa0617600:CDS | 25.0% |
| ! | ATTTGAAAAGTTGAGAATTG+AGG | + | chr4_2:68205076-68205095 | Msa0617600:intron | 25.0% |
| !!! | ACATTTTGTTTTAAAAACCC+TGG | + | chr4_2:68205230-68205249 | Msa0617600:intron | 25.0% |
| ! | TTCAACTTCTTATATAACCA+GGG | - | chr4_2:68205250-68205269 | None:intergenic | 25.0% |
| ! | ATTCAACTTCTTATATAACC+AGG | - | chr4_2:68205251-68205270 | None:intergenic | 25.0% |
| !!! | ATCAAATATCTTGCTTTTGA+TGG | + | chr4_2:68205477-68205496 | Msa0617600:CDS | 25.0% |
| ! | CCAAAAATACTAAATCTTGT+AGG | - | chr4_2:68205780-68205799 | None:intergenic | 25.0% |
| !! | CCTACAAGATTTAGTATTTT+TGG | + | chr4_2:68205777-68205796 | Msa0617600:intron | 25.0% |
| !! | ATCTGATTTCTTCTTACTTT+TGG | + | chr4_2:68205829-68205848 | Msa0617600:intron | 25.0% |
| ! | TCACTTACAAATCATTCTAA+CGG | - | chr4_2:68205943-68205962 | None:intergenic | 25.0% |
| ! | AAATTACACATCATTCAAAC+CGG | - | chr4_2:68205993-68206012 | None:intergenic | 25.0% |
| !! | GTTTGAATGATGTGTAATTT+TGG | + | chr4_2:68205993-68206012 | Msa0617600:intron | 25.0% |
| ! | CATAATGTATTGCTTTATCT+TGG | + | chr4_2:68206473-68206492 | Msa0617600:intron | 25.0% |
| ! | ATCTTGTGTGTTTATGTTTA+TGG | - | chr4_2:68206849-68206868 | None:intergenic | 25.0% |
| ! | TTCTAAATGTGTACAAAATG+TGG | + | chr4_2:68206880-68206899 | Msa0617600:intron | 25.0% |
| !!! | TTTTAGAGTTTCAAATTCCA+AGG | + | chr4_2:68207109-68207128 | Msa0617600:CDS | 25.0% |
| ! | TATATATCTAAAAGGCAGAA+GGG | - | chr4_2:68207463-68207482 | None:intergenic | 25.0% |
| ! | ATATATATCTAAAAGGCAGA+AGG | - | chr4_2:68207464-68207483 | None:intergenic | 25.0% |
| ! | GTTGGACATATATATCTAAA+AGG | - | chr4_2:68207471-68207490 | None:intergenic | 25.0% |
| ! | TTGGTTTCTCAAATAATTCT+CGG | + | chr4_2:68207582-68207601 | Msa0617600:intron | 25.0% |
| ! | AAAAGAGGATAGAAAATGAA+GGG | - | chr4_2:68207618-68207637 | None:intergenic | 25.0% |
| ! | TTCAATACTTATTAGAGTTG+AGG | - | chr4_2:68207641-68207660 | None:intergenic | 25.0% |
| !! | GTATTGAAGTTTAGGTTTAA+AGG | + | chr4_2:68207653-68207672 | Msa0617600:intron | 25.0% |
| ! | TGTAATACATATTCACAAAG+AGG | - | chr4_2:68207956-68207975 | None:intergenic | 25.0% |
| ! | GAAATGAAAACATTGAGATA+AGG | - | chr4_2:68208050-68208069 | None:intergenic | 25.0% |
| ! | CAGAAAAAATAACTAGTTGA+TGG | - | chr4_2:68208160-68208179 | None:intergenic | 25.0% |
| !!! | TTGAATATACTGGTTTTTCT+TGG | + | chr4_2:68208215-68208234 | Msa0617600:intron | 25.0% |
| !!! | TGAATATACTGGTTTTTCTT+GGG | + | chr4_2:68208216-68208235 | Msa0617600:intron | 25.0% |
| ! | TCACTAAGATTAATACACTA+CGG | + | chr4_2:68208258-68208277 | Msa0617600:intron | 25.0% |
| !! | AAAGTACTTATATTTAGGGA+CGG | - | chr4_2:68208459-68208478 | None:intergenic | 25.0% |
| !! | GGTCAAAGTACTTATATTTA+GGG | - | chr4_2:68208463-68208482 | None:intergenic | 25.0% |
| !! | TGGTCAAAGTACTTATATTT+AGG | - | chr4_2:68208464-68208483 | None:intergenic | 25.0% |
| !! | TTTTCTTAATTCTCGTGAAT+TGG | - | chr4_2:68208484-68208503 | None:intergenic | 25.0% |
| ! | TCACGAGAATTAAGAAAATT+AGG | + | chr4_2:68208486-68208505 | Msa0617600:intron | 25.0% |
| !! | TCTCGAGTTTTTAAATAATC+TGG | + | chr4_2:68208597-68208616 | Msa0617600:intron | 25.0% |
| !! | CTCGAGTTTTTAAATAATCT+GGG | + | chr4_2:68208598-68208617 | Msa0617600:intron | 25.0% |
| ! | GTATATCTAGTAACTTGAAA+AGG | + | chr4_2:68208641-68208660 | Msa0617600:intron | 25.0% |
| ! | ATATCTAGTAACTTGAAAAG+GGG | + | chr4_2:68208643-68208662 | Msa0617600:intron | 25.0% |
| ! | TTGAAAAGGGGTTTATAAAA+TGG | + | chr4_2:68208655-68208674 | Msa0617600:intron | 25.0% |
| ! | TGAAAAGGGGTTTATAAAAT+GGG | + | chr4_2:68208656-68208675 | Msa0617600:intron | 25.0% |
| ! | TCCAAAAAAAGCTTATATTG+AGG | + | chr4_2:68208693-68208712 | Msa0617600:intron | 25.0% |
| ! | CCAAAAAAAGCTTATATTGA+GGG | + | chr4_2:68208694-68208713 | Msa0617600:intron | 25.0% |
| ! | ATTATCATATTATGGCATGT+TGG | - | chr4_2:68208823-68208842 | None:intergenic | 25.0% |
| ! | ATTCTCTCGTTCATTAATTA+TGG | + | chr4_2:68209016-68209035 | Msa0617600:intron | 25.0% |
| ! | CATGTAAATATCCTTTCAAA+AGG | + | chr4_2:68209856-68209875 | Msa0617600:three_prime_UTR | 25.0% |
| !! | GGCATTGAAGAATTAAATTT+AGG | + | chr4_2:68209922-68209941 | Msa0617600:three_prime_UTR | 25.0% |
| ! | TATTATGCTGCAAATCAAAA+TGG | + | chr4_2:68210059-68210078 | Msa0617600:three_prime_UTR | 25.0% |
| ! | GTAAATTGATGATTGAGGAA+TGG | - | chr4_2:68204257-68204276 | None:intergenic | 30.0% |
| TTAACGTTACGTAACGTTAA+AGG | - | chr4_2:68204310-68204329 | None:intergenic | 30.0% | |
| !!! | TTTGGTGTTTTTGCTGAAAA+GGG | - | chr4_2:68204405-68204424 | None:intergenic | 30.0% |
| AATGTATGGTTAGGGTTAAA+GGG | - | chr4_2:68204446-68204465 | None:intergenic | 30.0% | |
| AACCCTAGTTAATCAATGTA+TGG | - | chr4_2:68204460-68204479 | None:intergenic | 30.0% | |
| !!! | TTGATTTGGCTAGTGATTTT+AGG | + | chr4_2:68204587-68204606 | Msa0617600:CDS | 30.0% |
| !!! | TTTTAGGTTAAGGTTTGCAA+AGG | + | chr4_2:68204603-68204622 | Msa0617600:CDS | 30.0% |
| ! | TTTAGGTTAAGGTTTGCAAA+GGG | + | chr4_2:68204604-68204623 | Msa0617600:CDS | 30.0% |
| GTGGTAATAGTAAAAGTAAG+AGG | + | chr4_2:68204638-68204657 | Msa0617600:CDS | 30.0% | |
| TGCTTGATGAACAAAATAAG+AGG | + | chr4_2:68204668-68204687 | Msa0617600:CDS | 30.0% | |
| GCTTGATGAACAAAATAAGA+GGG | + | chr4_2:68204669-68204688 | Msa0617600:CDS | 30.0% | |
| !! | TACTGTAATCAAAGGTGTTT+CGG | + | chr4_2:68204720-68204739 | Msa0617600:CDS | 30.0% |
| !! | AGAATATTCGGTGTGATAAA+GGG | + | chr4_2:68204743-68204762 | Msa0617600:CDS | 30.0% |
| TGATGTACTTGAATTCAATC+AGG | + | chr4_2:68204786-68204805 | Msa0617600:CDS | 30.0% | |
| !! | ATTGATTGCTGTTTGTATTG+CGG | + | chr4_2:68204917-68204936 | Msa0617600:intron | 30.0% |
| TTCAAACGTGTCTAATGAAA+TGG | - | chr4_2:68205153-68205172 | None:intergenic | 30.0% | |
| AATCAAAAATCAGCAGTACA+AGG | + | chr4_2:68205384-68205403 | Msa0617600:CDS | 30.0% | |
| ! | AATGCTCTTTTTGATATGAG+CGG | + | chr4_2:68205429-68205448 | Msa0617600:CDS | 30.0% |
| TCAAGAGGAAGTAAAGAAAT+CGG | + | chr4_2:68205551-68205570 | Msa0617600:CDS | 30.0% | |
| AGACATGTTTATTCTACATC+AGG | - | chr4_2:68205670-68205689 | None:intergenic | 30.0% | |
| TTCAATGTCAAGAGAAGTAA+TGG | - | chr4_2:68205700-68205719 | None:intergenic | 30.0% | |
| AATACTAAATCTTGTAGGGA+TGG | - | chr4_2:68205775-68205794 | None:intergenic | 30.0% | |
| CACTTACAAATCATTCTAAC+GGG | - | chr4_2:68205942-68205961 | None:intergenic | 30.0% | |
| ATGCGAATATTTCTCATTGT+GGG | - | chr4_2:68206422-68206441 | None:intergenic | 30.0% | |
| AATGCGAATATTTCTCATTG+TGG | - | chr4_2:68206423-68206442 | None:intergenic | 30.0% | |
| ATACATTATGTTCGCAAACT+AGG | - | chr4_2:68206463-68206482 | None:intergenic | 30.0% | |
| TATTGCTTTATCTTGGAACA+GGG | + | chr4_2:68206480-68206499 | Msa0617600:intron | 30.0% | |
| !!! | TTTTGGAGCAAATAATAGTG+AGG | - | chr4_2:68206506-68206525 | None:intergenic | 30.0% |
| ACTATTATTTGCTCCAAAAG+AGG | + | chr4_2:68206507-68206526 | Msa0617600:CDS | 30.0% | |
| TAATAAACCTAAACTGGGTA+TGG | - | chr4_2:68206726-68206745 | None:intergenic | 30.0% | |
| TAAGCTCCAAAATATGAACT+AGG | + | chr4_2:68206775-68206794 | Msa0617600:intron | 30.0% | |
| AAGCTCCAAAATATGAACTA+GGG | + | chr4_2:68206776-68206795 | Msa0617600:intron | 30.0% | |
| ! | CACGTGAATCAAAAGTTTTT+CGG | - | chr4_2:68207049-68207068 | None:intergenic | 30.0% |
| GCTTATCAGTTTAAGCTAAT+GGG | + | chr4_2:68207506-68207525 | Msa0617600:intron | 30.0% | |
| ATTCTTGATCACTTAGTTGA+GGG | - | chr4_2:68207560-68207579 | None:intergenic | 30.0% | |
| AATTCTTGATCACTTAGTTG+AGG | - | chr4_2:68207561-68207580 | None:intergenic | 30.0% | |
| ACTAAGTGATCAAGAATTGT+TGG | + | chr4_2:68207563-68207582 | Msa0617600:intron | 30.0% | |
| GAAAAGAGGATAGAAAATGA+AGG | - | chr4_2:68207619-68207638 | None:intergenic | 30.0% | |
| TTATTAGAGTTGAGGAAAAG+AGG | - | chr4_2:68207633-68207652 | None:intergenic | 30.0% | |
| ATGATAAAACATGCAACTGT+AGG | - | chr4_2:68207730-68207749 | None:intergenic | 30.0% | |
| CGTGAATACAAAATTCAAGA+TGG | + | chr4_2:68207892-68207911 | Msa0617600:intron | 30.0% | |
| ATATATGTGTTTGTGACTTG+TGG | + | chr4_2:68207978-68207997 | Msa0617600:intron | 30.0% | |
| TTCAACGTGTGATGATAAAA+GGG | - | chr4_2:68208200-68208219 | None:intergenic | 30.0% | |
| ATTCAACGTGTGATGATAAA+AGG | - | chr4_2:68208201-68208220 | None:intergenic | 30.0% | |
| GAATGATGAAGTGTATAGTT+TGG | + | chr4_2:68208417-68208436 | Msa0617600:intron | 30.0% | |
| ! | TAATTTGTCACCAATGTGTA+TGG | + | chr4_2:68208529-68208548 | Msa0617600:intron | 30.0% |
| !!! | CCCTCAATATAAGCTTTTTT+TGG | - | chr4_2:68208697-68208716 | None:intergenic | 30.0% |
| AAAAAGCTTATATTGAGGGA+CGG | + | chr4_2:68208698-68208717 | Msa0617600:intron | 30.0% | |
| ACTTCATGTAAGTTTCTGAT+TGG | + | chr4_2:68208754-68208773 | Msa0617600:intron | 30.0% | |
| AATATACAGAATGAGCTTCT+TGG | - | chr4_2:68208870-68208889 | None:intergenic | 30.0% | |
| AGTTTGCATTGTTGGATTAT+TGG | + | chr4_2:68209741-68209760 | Msa0617600:CDS | 30.0% | |
| AGTACAGTATACAAAATGAG+TGG | + | chr4_2:68209887-68209906 | Msa0617600:three_prime_UTR | 30.0% | |
| ACTAAAATATCTCCAGAACT+AGG | - | chr4_2:68209955-68209974 | None:intergenic | 30.0% | |
| !!! | TTCTGGAGATATTTTAGTGT+TGG | + | chr4_2:68209957-68209976 | Msa0617600:three_prime_UTR | 30.0% |
| !!! | TCTGGAGATATTTTAGTGTT+GGG | + | chr4_2:68209958-68209977 | Msa0617600:three_prime_UTR | 30.0% |
| AGTGAAGAAGATACTGGAAA+TGG | - | chr4_2:68204219-68204238 | None:intergenic | 35.0% | |
| TTGAGGAATGGAAGATAAGA+GGG | - | chr4_2:68204245-68204264 | None:intergenic | 35.0% | |
| ATTGAGGAATGGAAGATAAG+AGG | - | chr4_2:68204246-68204265 | None:intergenic | 35.0% | |
| GAAGGTGGTGAATATTAGAT+CGG | - | chr4_2:68204334-68204353 | None:intergenic | 35.0% | |
| ! | TAAACTGCGGAGATTTTGTA+CGG | - | chr4_2:68204377-68204396 | None:intergenic | 35.0% |
| GAAAAGGGTAACATAAACTG+CGG | - | chr4_2:68204390-68204409 | None:intergenic | 35.0% | |
| !!! | CTTTGGTGTTTTTGCTGAAA+AGG | - | chr4_2:68204406-68204425 | None:intergenic | 35.0% |
| CAATGTATGGTTAGGGTTAA+AGG | - | chr4_2:68204447-68204466 | None:intergenic | 35.0% | |
| !!! | TTCATTTTTGAGTATGGAGG+TGG | + | chr4_2:68204519-68204538 | Msa0617600:exon | 35.0% |
| CATTGGAATCTTTGGGTAAA+GGG | + | chr4_2:68204563-68204582 | Msa0617600:CDS | 35.0% | |
| TTTGGGTAAAGGGTTTGATT+TGG | + | chr4_2:68204573-68204592 | Msa0617600:CDS | 35.0% | |
| !!! | TGGCTAGTGATTTTAGGTTA+AGG | + | chr4_2:68204593-68204612 | Msa0617600:CDS | 35.0% |
| !!! | AAGAGGGATATTTTGATTCC+TGG | + | chr4_2:68204685-68204704 | Msa0617600:CDS | 35.0% |
| ! | AAGGTGTTTCGGAGAATATT+CGG | + | chr4_2:68204731-68204750 | Msa0617600:CDS | 35.0% |
| !! | GAGAATATTCGGTGTGATAA+AGG | + | chr4_2:68204742-68204761 | Msa0617600:CDS | 35.0% |
| !! | GAATATTCGGTGTGATAAAG+GGG | + | chr4_2:68204744-68204763 | Msa0617600:CDS | 35.0% |
| GTTAATGCAGTTCACACATT+TGG | + | chr4_2:68205050-68205069 | Msa0617600:intron | 35.0% | |
| GTACAAGGAAAAATTCCTTC+TGG | + | chr4_2:68205399-68205418 | Msa0617600:CDS | 35.0% | |
| ! | AGAGCATTAAAATAGCCAGA+AGG | - | chr4_2:68205417-68205436 | None:intergenic | 35.0% |
| ! | TTTTTGATATGAGCGGTGAT+TGG | + | chr4_2:68205436-68205455 | Msa0617600:CDS | 35.0% |
| AGCAAGATATTTGATGTCAG+CGG | - | chr4_2:68205472-68205491 | None:intergenic | 35.0% | |
| TGTCTAGGTAAACAAACACT+AGG | + | chr4_2:68205601-68205620 | Msa0617600:intron | 35.0% | |
| ATTCTACATCAGGAAAACAC+AGG | - | chr4_2:68205660-68205679 | None:intergenic | 35.0% | |
| ! | TCAAGAGAAGTAATGGAATG+CGG | - | chr4_2:68205693-68205712 | None:intergenic | 35.0% |
| GAAGCACACAAGCAAAAAAA+AGG | - | chr4_2:68205741-68205760 | None:intergenic | 35.0% | |
| !! | TTCTTCTTACTTTTGGCACA+AGG | + | chr4_2:68205836-68205855 | Msa0617600:intron | 35.0% |
| AACTTAAAAGTCTGTCCACA+AGG | - | chr4_2:68205871-68205890 | None:intergenic | 35.0% | |
| AGCATAGTAACTGAAGTTTC+CGG | + | chr4_2:68205971-68205990 | Msa0617600:intron | 35.0% | |
| ! | TGATGCTGATTGAGTTTGTT+AGG | + | chr4_2:68206029-68206048 | Msa0617600:intron | 35.0% |
| GATGCAATCTCTCTATATGT+AGG | + | chr4_2:68206314-68206333 | Msa0617600:intron | 35.0% | |
| TGAAATACTGGTAAACTGTG+TGG | - | chr4_2:68206376-68206395 | None:intergenic | 35.0% | |
| !! | GCTAGATGTTTCTGAAATAC+TGG | - | chr4_2:68206388-68206407 | None:intergenic | 35.0% |
| GTATTGCTTTATCTTGGAAC+AGG | + | chr4_2:68206479-68206498 | Msa0617600:intron | 35.0% | |
| ATTATTTGCTCCAAAAGAGG+AGG | + | chr4_2:68206510-68206529 | Msa0617600:CDS | 35.0% | |
| AACTTGAATATGATCGCTTC+AGG | - | chr4_2:68206588-68206607 | None:intergenic | 35.0% | |
| CATTTATCCATACCCAGTTT+AGG | + | chr4_2:68206716-68206735 | Msa0617600:intron | 35.0% | |
| ! | CTGTTCCCTAGTTCATATTT+TGG | - | chr4_2:68206784-68206803 | None:intergenic | 35.0% |
| CAAAATATGAACTAGGGAAC+AGG | + | chr4_2:68206782-68206801 | Msa0617600:intron | 35.0% | |
| TATTGTAAATCTTCGGGAGA+TGG | - | chr4_2:68207087-68207106 | None:intergenic | 35.0% | |
| AGTTTCAAATTCCAAGGCAA+TGG | + | chr4_2:68207115-68207134 | Msa0617600:CDS | 35.0% | |
| GTTTCAAATTCCAAGGCAAT+GGG | + | chr4_2:68207116-68207135 | Msa0617600:CDS | 35.0% | |
| GTAGAGCTAATATGAAGCTT+TGG | - | chr4_2:68207222-68207241 | None:intergenic | 35.0% | |
| TTAGCTAAACTCTCCTGTTT+GGG | + | chr4_2:68207252-68207271 | Msa0617600:intron | 35.0% | |
| CGCTTATCAGTTTAAGCTAA+TGG | + | chr4_2:68207505-68207524 | Msa0617600:intron | 35.0% | |
| ! | AATTTTGTATTCACGCATGC+AGG | - | chr4_2:68207887-68207906 | None:intergenic | 35.0% |
| ! | GTGTTTGCTACGAACAATAA+TGG | - | chr4_2:68208076-68208095 | None:intergenic | 35.0% |
| TCATCACACGTTGAATATAC+TGG | + | chr4_2:68208205-68208224 | Msa0617600:intron | 35.0% | |
| ATGTGCTGCATAACTTTGTA+GGG | + | chr4_2:68208915-68208934 | Msa0617600:intron | 35.0% | |
| !! | GCACGACCTTTCATTTTTAT+AGG | + | chr4_2:68208985-68209004 | Msa0617600:intron | 35.0% |
| ! | GGTATTTTGTACAAAATGGC+AGG | + | chr4_2:68209037-68209056 | Msa0617600:intron | 35.0% |
| ! | ATTTTGTACAAAATGGCAGG+TGG | + | chr4_2:68209040-68209059 | Msa0617600:intron | 35.0% |
| ! | AAGAGAGGATCATCTTGTTT+GGG | - | chr4_2:68209160-68209179 | None:intergenic | 35.0% |
| AACTCTGGCATTTATCCTAA+CGG | + | chr4_2:68209572-68209591 | Msa0617600:CDS | 35.0% | |
| ! | GTTGGATTATTGGTGATTCT+AGG | + | chr4_2:68209751-68209770 | Msa0617600:exon | 35.0% |
| GCAACACTAAATGATAACCA+CGG | - | chr4_2:68209807-68209826 | None:intergenic | 35.0% | |
| ! | ACTGTACAAAGCCTTTTGAA+AGG | - | chr4_2:68209870-68209889 | None:intergenic | 35.0% |
| TTAGGATATACTCCTAGTTC+TGG | + | chr4_2:68209940-68209959 | Msa0617600:three_prime_UTR | 35.0% | |
| AAAGGGCGAATTGTAATGAT+AGG | + | chr4_2:68210026-68210045 | Msa0617600:three_prime_UTR | 35.0% | |
| AAATGAAAGTTCGAGGAAGG+TGG | - | chr4_2:68204349-68204368 | None:intergenic | 40.0% | |
| TCGAAATGAAAGTTCGAGGA+AGG | - | chr4_2:68204352-68204371 | None:intergenic | 40.0% | |
| GGAATCGAAATGAAAGTTCG+AGG | - | chr4_2:68204356-68204375 | None:intergenic | 40.0% | |
| ! | TCAACGAAAGGAGTTAGCTT+TGG | - | chr4_2:68204423-68204442 | None:intergenic | 40.0% |
| ! | AGAGTGGCATTGGAATCTTT+GGG | + | chr4_2:68204556-68204575 | Msa0617600:CDS | 40.0% |
| GCATTGGAATCTTTGGGTAA+AGG | + | chr4_2:68204562-68204581 | Msa0617600:CDS | 40.0% | |
| !!! | GATATTTTGATTCCTGGAGC+TGG | + | chr4_2:68204691-68204710 | Msa0617600:CDS | 40.0% |
| GTGATAAAGGGGATCGAATT+CGG | + | chr4_2:68204755-68204774 | Msa0617600:CDS | 40.0% | |
| ACTTCCTCTTGAAGTACAAG+CGG | - | chr4_2:68205543-68205562 | None:intergenic | 40.0% | |
| GTTTACCTAGACAATGAAGC+TGG | - | chr4_2:68205594-68205613 | None:intergenic | 40.0% | |
| ACAAGGCTCAAATTACCTTG+TGG | + | chr4_2:68205853-68205872 | Msa0617600:intron | 40.0% | |
| CTATGTGAGTACCATATGTC+TGG | - | chr4_2:68206064-68206083 | None:intergenic | 40.0% | |
| GACATATGGTACTCACATAG+TGG | + | chr4_2:68206064-68206083 | Msa0617600:CDS | 40.0% | |
| TATGGTACTCACATAGTGGT+AGG | + | chr4_2:68206068-68206087 | Msa0617600:CDS | 40.0% | |
| CATTCATCAAAGATTCCTCC+CGG | + | chr4_2:68206134-68206153 | Msa0617600:CDS | 40.0% | |
| TCTTCCTCTGTAGTGAAGAA+GGG | - | chr4_2:68206217-68206236 | None:intergenic | 40.0% | |
| TTCTTCACTACAGAGGAAGA+CGG | + | chr4_2:68206217-68206236 | Msa0617600:CDS | 40.0% | |
| TGGTGTTTGATTGCATCACA+CGG | - | chr4_2:68206356-68206375 | None:intergenic | 40.0% | |
| TCAAGCACAGTCACTCAAAT+TGG | + | chr4_2:68206541-68206560 | Msa0617600:CDS | 40.0% | |
| !! | GCTTCATATTAGCTCTACAG+AGG | + | chr4_2:68207224-68207243 | Msa0617600:CDS | 40.0% |
| GTTAGCTAAACTCTCCTGTT+TGG | + | chr4_2:68207251-68207270 | Msa0617600:intron | 40.0% | |
| GAATGCTTGTTTACCCAAAC+AGG | - | chr4_2:68207268-68207287 | None:intergenic | 40.0% | |
| GTACAGTACAGTTCAACACA+TGG | - | chr4_2:68207296-68207315 | None:intergenic | 40.0% | |
| ! | AGATTTTCTCCGCGTATGTA+TGG | + | chr4_2:68207382-68207401 | Msa0617600:intron | 40.0% |
| !! | ATAACTAGTTGATGGGTCGT+AGG | - | chr4_2:68208152-68208171 | None:intergenic | 40.0% |
| !! | TAAGCTTGTCTTTCTGGTTC+TGG | - | chr4_2:68208294-68208313 | None:intergenic | 40.0% |
| GAACCAGAAAGACAAGCTTA+AGG | + | chr4_2:68208294-68208313 | Msa0617600:intron | 40.0% | |
| TCAGCTATGGTACTTTGACT+AGG | - | chr4_2:68208360-68208379 | None:intergenic | 40.0% | |
| GTACTTATATTTAGGGACGG+AGG | - | chr4_2:68208456-68208475 | None:intergenic | 40.0% | |
| TTTGCTACGTCCATACACAT+TGG | - | chr4_2:68208542-68208561 | None:intergenic | 40.0% | |
| TATGGACGTAGCAAAATTGC+TGG | + | chr4_2:68208547-68208566 | Msa0617600:intron | 40.0% | |
| ATGGACGTAGCAAAATTGCT+GGG | + | chr4_2:68208548-68208567 | Msa0617600:intron | 40.0% | |
| ! | TGTAAGTTTCTGATTGGCTC+TGG | + | chr4_2:68208760-68208779 | Msa0617600:intron | 40.0% |
| !!! | TGATTGGCTCTGGTGATTTT+GGG | + | chr4_2:68208770-68208789 | Msa0617600:intron | 40.0% |
| CATGTGCTGCATAACTTTGT+AGG | + | chr4_2:68208914-68208933 | Msa0617600:intron | 40.0% | |
| AGCAGATAAAAGAAGAGTGG+AGG | - | chr4_2:68208963-68208982 | None:intergenic | 40.0% | |
| CCAAGCAGATAAAAGAAGAG+TGG | - | chr4_2:68208966-68208985 | None:intergenic | 40.0% | |
| ! | CCACTCTTCTTTTATCTGCT+TGG | + | chr4_2:68208963-68208982 | Msa0617600:intron | 40.0% |
| GAAGAGAGGATCATCTTGTT+TGG | - | chr4_2:68209161-68209180 | None:intergenic | 40.0% | |
| !! | TGGTTCTAGGAATTGGTTAC+TGG | - | chr4_2:68209240-68209259 | None:intergenic | 40.0% |
| !! | ATCTGACTGGTTCTAGGAAT+TGG | - | chr4_2:68209247-68209266 | None:intergenic | 40.0% |
| AATTCCTAGAACCAGTCAGA+TGG | + | chr4_2:68209246-68209265 | Msa0617600:CDS | 40.0% | |
| CGCAATCATTCAACCAGTTA+GGG | - | chr4_2:68209313-68209332 | None:intergenic | 40.0% | |
| CCTAACTGGTTGAATGATTG+CGG | + | chr4_2:68209311-68209330 | Msa0617600:CDS | 40.0% | |
| !! | GGAGGTGTTTACATTGTAAC+TGG | + | chr4_2:68209332-68209351 | Msa0617600:CDS | 40.0% |
| TACTATACGGAAGTCAGAGT+GGG | + | chr4_2:68209433-68209452 | Msa0617600:CDS | 40.0% | |
| ! | GATGATTTTCTTGAAGCCTC+TGG | - | chr4_2:68209467-68209486 | None:intergenic | 40.0% |
| ACTCTGGCATTTATCCTAAC+GGG | + | chr4_2:68209573-68209592 | Msa0617600:CDS | 40.0% | |
| GCAGGTAAAGTTTGCATTGT+TGG | + | chr4_2:68209733-68209752 | Msa0617600:CDS | 40.0% | |
| ! | GGATTATTGGTGATTCTAGG+TGG | + | chr4_2:68209754-68209773 | Msa0617600:exon | 40.0% |
| CTGCAAATCAAAATGGATCC+AGG | + | chr4_2:68210066-68210085 | Msa0617600:three_prime_UTR | 40.0% | |
| ATTATCATAGCTATGCTGCC+TGG | - | chr4_2:68210087-68210106 | None:intergenic | 40.0% | |
| GGGTGAAGTGAAGAAGATAC+TGG | - | chr4_2:68204225-68204244 | None:intergenic | 45.0% | |
| AGGGTTAAAGGGTCAACGAA+AGG | - | chr4_2:68204435-68204454 | None:intergenic | 45.0% | |
| TTTGAGTATGGAGGTGGAAG+AGG | + | chr4_2:68204525-68204544 | Msa0617600:exon | 45.0% | |
| TTGAGTATGGAGGTGGAAGA+GGG | + | chr4_2:68204526-68204545 | Msa0617600:exon | 45.0% | |
| ! | GAGAGTGGCATTGGAATCTT+TGG | + | chr4_2:68204555-68204574 | Msa0617600:CDS | 45.0% |
| AGGTTTGCAAAGGGAATTCG+TGG | + | chr4_2:68204613-68204632 | Msa0617600:CDS | 45.0% | |
| GGTTTGCAAAGGGAATTCGT+GGG | + | chr4_2:68204614-68204633 | Msa0617600:CDS | 45.0% | |
| GTTTGCAAAGGGAATTCGTG+GGG | + | chr4_2:68204615-68204634 | Msa0617600:CDS | 45.0% | |
| TTTGCAAAGGGAATTCGTGG+GGG | + | chr4_2:68204616-68204635 | Msa0617600:CDS | 45.0% | |
| !!! | ATTTTGATTCCTGGAGCTGG+TGG | + | chr4_2:68204694-68204713 | Msa0617600:CDS | 45.0% |
| GGTGGAGCTACTGTAATCAA+AGG | + | chr4_2:68204712-68204731 | Msa0617600:CDS | 45.0% | |
| TTCTCCGCTTGTACTTCAAG+AGG | + | chr4_2:68205536-68205555 | Msa0617600:CDS | 45.0% | |
| !! | GCTGATTGAGTTTGTTAGGC+AGG | + | chr4_2:68206033-68206052 | Msa0617600:intron | 45.0% |
| TACTCACATAGTGGTAGGCA+TGG | + | chr4_2:68206073-68206092 | Msa0617600:CDS | 45.0% | |
| TAAATGCCTCCTGACATCAC+CGG | - | chr4_2:68206156-68206175 | None:intergenic | 45.0% | |
| !! | TGATGTCAGGAGGCATTTAG+AGG | + | chr4_2:68206157-68206176 | Msa0617600:CDS | 45.0% |
| !! | AGGAGGCATTTAGAGGATCT+TGG | + | chr4_2:68206164-68206183 | Msa0617600:CDS | 45.0% |
| GTCTTCCTCTGTAGTGAAGA+AGG | - | chr4_2:68206218-68206237 | None:intergenic | 45.0% | |
| GACGGCAGATAGCAAACATA+AGG | + | chr4_2:68206235-68206254 | Msa0617600:CDS | 45.0% | |
| TCTCTATATGTAGGTCCCAG+AGG | + | chr4_2:68206323-68206342 | Msa0617600:intron | 45.0% | |
| TCACACGGTTAAAGACCTCT+GGG | - | chr4_2:68206341-68206360 | None:intergenic | 45.0% | |
| ATCACACGGTTAAAGACCTC+TGG | - | chr4_2:68206342-68206361 | None:intergenic | 45.0% | |
| ! | GAACACATCTCCTCCTCTTT+TGG | - | chr4_2:68206523-68206542 | None:intergenic | 45.0% |
| ATGATCGCTTCAGGATTCGA+AGG | - | chr4_2:68206579-68206598 | None:intergenic | 45.0% | |
| TGACTAAGATAGCCACTTCC+AGG | - | chr4_2:68206642-68206661 | None:intergenic | 45.0% | |
| CTGTGCAAGAAGTGATTGCT+TGG | - | chr4_2:68206995-68207014 | None:intergenic | 45.0% | |
| AGAGGCAGTTCGCAAAACAT+GGG | - | chr4_2:68207144-68207163 | None:intergenic | 45.0% | |
| GAATTGCAGTGAAAGGGAAG+AGG | - | chr4_2:68207187-68207206 | None:intergenic | 45.0% | |
| GCAGCAGAATTGCAGTGAAA+GGG | - | chr4_2:68207193-68207212 | None:intergenic | 45.0% | |
| AGCAGCAGAATTGCAGTGAA+AGG | - | chr4_2:68207194-68207213 | None:intergenic | 45.0% | |
| TTCACTGCAATTCTGCTGCT+TGG | + | chr4_2:68207194-68207213 | Msa0617600:CDS | 45.0% | |
| ! | TCACTGCAATTCTGCTGCTT+GGG | + | chr4_2:68207195-68207214 | Msa0617600:CDS | 45.0% |
| TTTCTCCGCGTATGTATGGT+TGG | + | chr4_2:68207386-68207405 | Msa0617600:intron | 45.0% | |
| TATCGCCAACCATACATACG+CGG | - | chr4_2:68207394-68207413 | None:intergenic | 45.0% | |
| TGTATGGTTGGCGATATAGC+TGG | + | chr4_2:68207398-68207417 | Msa0617600:intron | 45.0% | |
| GTATGGTTGGCGATATAGCT+GGG | + | chr4_2:68207399-68207418 | Msa0617600:intron | 45.0% | |
| TATGGTTGGCGATATAGCTG+GGG | + | chr4_2:68207400-68207419 | Msa0617600:intron | 45.0% | |
| GATAAGCGACGACGCAAAAA+TGG | - | chr4_2:68207493-68207512 | None:intergenic | 45.0% | |
| GTGCCTTAAGCTTGTCTTTC+TGG | - | chr4_2:68208300-68208319 | None:intergenic | 45.0% | |
| GAAAGACAAGCTTAAGGCAC+CGG | + | chr4_2:68208300-68208319 | Msa0617600:intron | 45.0% | |
| TGTGTGCCTCAACCAATAAG+AGG | + | chr4_2:68208326-68208345 | Msa0617600:intron | 45.0% | |
| ! | CTAGCACCTCTTATTGGTTG+AGG | - | chr4_2:68208335-68208354 | None:intergenic | 45.0% |
| TAGGCACTAGCACCTCTTAT+TGG | - | chr4_2:68208341-68208360 | None:intergenic | 45.0% | |
| TACGGTAGATCATGTGCTTC+TGG | + | chr4_2:68208731-68208750 | Msa0617600:intron | 45.0% | |
| !!! | CTGATTGGCTCTGGTGATTT+TGG | + | chr4_2:68208769-68208788 | Msa0617600:intron | 45.0% |
| GGTGGTAAGTGAACAGAAAC+CGG | + | chr4_2:68209058-68209077 | Msa0617600:intron | 45.0% | |
| ! | AGAGGATCATCTTGTTTGGG+AGG | - | chr4_2:68209157-68209176 | None:intergenic | 45.0% |
| CCACATAGATTGTATGCTCG+GGG | - | chr4_2:68209195-68209214 | None:intergenic | 45.0% | |
| GCCACATAGATTGTATGCTC+GGG | - | chr4_2:68209196-68209215 | None:intergenic | 45.0% | |
| CGCCACATAGATTGTATGCT+CGG | - | chr4_2:68209197-68209216 | None:intergenic | 45.0% | |
| AGCATACAATCTATGTGGCG+AGG | + | chr4_2:68209197-68209216 | Msa0617600:CDS | 45.0% | |
| ! | TCTTCCATCTGACTGGTTCT+AGG | - | chr4_2:68209253-68209272 | None:intergenic | 45.0% |
| GAGAATCTCTTCCATCTGAC+TGG | - | chr4_2:68209260-68209279 | None:intergenic | 45.0% | |
| CCGCAATCATTCAACCAGTT+AGG | - | chr4_2:68209314-68209333 | None:intergenic | 45.0% | |
| AACTGGTTGAATGATTGCGG+AGG | + | chr4_2:68209314-68209333 | Msa0617600:CDS | 45.0% | |
| GTGCACAGCTCATTATCAGA+GGG | + | chr4_2:68209354-68209373 | Msa0617600:CDS | 45.0% | |
| AGCTCATTATCAGAGGGAGT+TGG | + | chr4_2:68209360-68209379 | Msa0617600:CDS | 45.0% | |
| !!! | CGCAGATGAAGCACGTTTTT+TGG | - | chr4_2:68209386-68209405 | None:intergenic | 45.0% |
| GTACTATACGGAAGTCAGAG+TGG | + | chr4_2:68209432-68209451 | Msa0617600:CDS | 45.0% | |
| ACTATACGGAAGTCAGAGTG+GGG | + | chr4_2:68209434-68209453 | Msa0617600:CDS | 45.0% | |
| ! | TTTTCTTGAAGCCTCTGGTG+CGG | - | chr4_2:68209462-68209481 | None:intergenic | 45.0% |
| ATGCCAGAGTTAAGTGCAGT+TGG | - | chr4_2:68209563-68209582 | None:intergenic | 45.0% | |
| AGTAGTTTACTCGAGCGAAC+AGG | - | chr4_2:68209608-68209627 | None:intergenic | 45.0% | |
| TAAATACGTCGAGACAGCTG+AGG | + | chr4_2:68209628-68209647 | Msa0617600:CDS | 45.0% | |
| TAGCAGCTGTAACCAACCAA+TGG | - | chr4_2:68209682-68209701 | None:intergenic | 45.0% | |
| CTGAAGTGATAAGATCACCG+TGG | + | chr4_2:68209787-68209806 | Msa0617600:three_prime_UTR | 45.0% | |
| AATGAGTGGCTGTTGACATG+AGG | + | chr4_2:68209901-68209920 | Msa0617600:three_prime_UTR | 45.0% | |
| !! | TTATTATTATTATCATATTA+TGG | - | chr4_2:68208831-68208850 | None:intergenic | 5.0% |
| !! | GGAAGAGGGTATTGAGAGAG+TGG | + | chr4_2:68204540-68204559 | Msa0617600:CDS | 50.0% |
| !! | GGGTATTGAGAGAGTGGCAT+TGG | + | chr4_2:68204546-68204565 | Msa0617600:CDS | 50.0% |
| CAGCAACTCAGACATCTGCA+AGG | - | chr4_2:68205364-68205383 | None:intergenic | 50.0% | |
| ATTTGATGTCAGCGGCGTCA+CGG | - | chr4_2:68205464-68205483 | None:intergenic | 50.0% | |
| ! | AGAAATCGGTTCCAGCTCAG+TGG | + | chr4_2:68205565-68205584 | Msa0617600:CDS | 50.0% |
| ! | GAAATCGGTTCCAGCTCAGT+GGG | + | chr4_2:68205566-68205585 | Msa0617600:CDS | 50.0% |
| GGGATCCAGCTTCATTGTCT+AGG | + | chr4_2:68205586-68205605 | Msa0617600:CDS | 50.0% | |
| GGCAGGTTCATCCAGACATA+TGG | + | chr4_2:68206050-68206069 | Msa0617600:intron | 50.0% | |
| ATAGTGGTAGGCATGGCTGT+TGG | + | chr4_2:68206080-68206099 | Msa0617600:CDS | 50.0% | |
| AAATGCCTCCTGACATCACC+GGG | - | chr4_2:68206155-68206174 | None:intergenic | 50.0% | |
| GAAGCCCTTCTTCACTACAG+AGG | + | chr4_2:68206210-68206229 | Msa0617600:CDS | 50.0% | |
| CCAGTCAGAAGCGAGGAAAT+CGG | - | chr4_2:68206615-68206634 | None:intergenic | 50.0% | |
| AGGAATTCCAGTCAGAAGCG+AGG | - | chr4_2:68206622-68206641 | None:intergenic | 50.0% | |
| TCGCTTCTGACTGGAATTCC+TGG | + | chr4_2:68206621-68206640 | Msa0617600:CDS | 50.0% | |
| CTGACTGGAATTCCTGGAAG+TGG | + | chr4_2:68206627-68206646 | Msa0617600:CDS | 50.0% | |
| CAGAGAAGCAAAGCACAGCA+AGG | - | chr4_2:68206960-68206979 | None:intergenic | 50.0% | |
| GAGAGGCAGTTCGCAAAACA+TGG | - | chr4_2:68207145-68207164 | None:intergenic | 50.0% | |
| ! | TGTTTTGCGAACTGCCTCTC+AGG | + | chr4_2:68207145-68207164 | Msa0617600:CDS | 50.0% |
| ATGGTTGGCGATATAGCTGG+GGG | + | chr4_2:68207401-68207420 | Msa0617600:intron | 50.0% | |
| AGCGACGACGCAAAAATGGT+TGG | - | chr4_2:68207489-68207508 | None:intergenic | 50.0% | |
| TTGGTTGAGGCACACACATC+CGG | - | chr4_2:68208322-68208341 | None:intergenic | 50.0% | |
| AGTACCATAGCTGAAGCCGT+TGG | + | chr4_2:68208366-68208385 | Msa0617600:intron | 50.0% | |
| AGGGACGGAGTCGTGATTTA+CGG | + | chr4_2:68208713-68208732 | Msa0617600:intron | 50.0% | |
| ! | GCTTCTTGGCTCGTAGATGT+TGG | - | chr4_2:68208856-68208875 | None:intergenic | 50.0% |
| GGTAAGTGAACAGAAACCGG+TGG | + | chr4_2:68209061-68209080 | Msa0617600:CDS | 50.0% | |
| AGTGAACAGAAACCGGTGGT+TGG | + | chr4_2:68209065-68209084 | Msa0617600:CDS | 50.0% | |
| !!! | TGTCACTTTTCTTGCCCTCC+AGG | - | chr4_2:68209103-68209122 | None:intergenic | 50.0% |
| AGATTGTATGCTCGGGGTTG+AGG | - | chr4_2:68209189-68209208 | None:intergenic | 50.0% | |
| CCCCGAGCATACAATCTATG+TGG | + | chr4_2:68209192-68209211 | Msa0617600:CDS | 50.0% | |
| TCGTCAAGCATGACCCTAAC+TGG | + | chr4_2:68209297-68209316 | Msa0617600:CDS | 50.0% | |
| GGTGCACAGCTCATTATCAG+AGG | + | chr4_2:68209353-68209372 | Msa0617600:CDS | 50.0% | |
| GCTCCAACTGCACTTAACTC+TGG | + | chr4_2:68209557-68209576 | Msa0617600:CDS | 50.0% | |
| ! | GAGACAGCTGAGGTTTTACG+TGG | + | chr4_2:68209638-68209657 | Msa0617600:CDS | 50.0% |
| !! | AATGGCCAGGAGCATCATGA+GGG | - | chr4_2:68209664-68209683 | None:intergenic | 50.0% |
| AGCTGCTAAGCTTGTCACTG+AGG | + | chr4_2:68209694-68209713 | Msa0617600:CDS | 50.0% | |
| GCTGCTAAGCTTGTCACTGA+GGG | + | chr4_2:68209695-68209714 | Msa0617600:CDS | 50.0% | |
| GTCACTGAGGGTGGTAAGAT+AGG | + | chr4_2:68209707-68209726 | Msa0617600:CDS | 50.0% | |
| GGGTGGTAAGATAGGATTGC+AGG | + | chr4_2:68209715-68209734 | Msa0617600:CDS | 50.0% | |
| AGATTCCTCCCGGTGATGTC+AGG | + | chr4_2:68206144-68206163 | Msa0617600:CDS | 55.0% | |
| CCGATTTCCTCGCTTCTGAC+TGG | + | chr4_2:68206612-68206631 | Msa0617600:CDS | 55.0% | |
| AACTGCCTCTCAGGCATCAG+CGG | + | chr4_2:68207154-68207173 | Msa0617600:CDS | 55.0% | |
| TTTCTCCGCTGATGCCTGAG+AGG | - | chr4_2:68207162-68207181 | None:intergenic | 55.0% | |
| TACAAGCGAAGGCCAACCAC+CGG | - | chr4_2:68209080-68209099 | None:intergenic | 55.0% | |
| AGTGCAGTTGGAGCCTGCTT+TGG | - | chr4_2:68209551-68209570 | None:intergenic | 55.0% | |
| TTACTCGAGCGAACAGGCAC+AGG | - | chr4_2:68209602-68209621 | None:intergenic | 55.0% | |
| !! | CAATGGCCAGGAGCATCATG+AGG | - | chr4_2:68209665-68209684 | None:intergenic | 55.0% |
| CTCATGATGCTCCTGGCCAT+TGG | + | chr4_2:68209663-68209682 | Msa0617600:CDS | 55.0% | |
| TGATGCTCCTGGCCATTGGT+TGG | + | chr4_2:68209667-68209686 | Msa0617600:CDS | 55.0% | |
| GCTGTAACCAACCAATGGCC+AGG | - | chr4_2:68209677-68209696 | None:intergenic | 55.0% | |
| GCTAAGCTTGTCACTGAGGG+TGG | + | chr4_2:68209698-68209717 | Msa0617600:CDS | 55.0% | |
| GCAAAGGGAATTCGTGGGGG+TGG | + | chr4_2:68204619-68204638 | Msa0617600:CDS | 60.0% | |
| ACAGTAGCTCCACCAGCTCC+AGG | - | chr4_2:68204706-68204725 | None:intergenic | 60.0% | |
| GAAGCTGGATCCCACTGAGC+TGG | - | chr4_2:68205579-68205598 | None:intergenic | 60.0% | |
| GTGGTAGGCATGGCTGTTGG+AGG | + | chr4_2:68206083-68206102 | Msa0617600:CDS | 60.0% | |
| TTCCTCCCGGTGATGTCAGG+AGG | + | chr4_2:68206147-68206166 | Msa0617600:CDS | 60.0% | |
| AACATGGGCGCCCATTGCCT+TGG | - | chr4_2:68207129-68207148 | None:intergenic | 60.0% | |
| GCAGCCAACGGCTTCAGCTA+TGG | - | chr4_2:68208373-68208392 | None:intergenic | 60.0% | |
| GCCACGTCTAACGCAGCCAA+CGG | - | chr4_2:68208385-68208404 | None:intergenic | 60.0% | |
| !! | GGTTGGCCTTCGCTTGTACC+TGG | + | chr4_2:68209082-68209101 | Msa0617600:CDS | 60.0% |
| TGGCCTTCGCTTGTACCTGG+AGG | + | chr4_2:68209085-68209104 | Msa0617600:CDS | 60.0% | |
| GGCCTTCGCTTGTACCTGGA+GGG | + | chr4_2:68209086-68209105 | Msa0617600:CDS | 60.0% | |
| TGCCCTCCAGGTACAAGCGA+AGG | - | chr4_2:68209091-68209110 | None:intergenic | 60.0% | |
| TGCTGCTGCTCCACCAAAGC+AGG | + | chr4_2:68209535-68209554 | Msa0617600:CDS | 60.0% | |
| GCAGTTGGAGCCTGCTTTGG+TGG | - | chr4_2:68209548-68209567 | None:intergenic | 60.0% | |
| TGCCTCCTGACATCACCGGG+AGG | - | chr4_2:68206152-68206171 | None:intergenic | 65.0% | |
| ! | GCCGTTGGCTGCGTTAGACG+TGG | + | chr4_2:68208381-68208400 | Msa0617600:intron | 65.0% |
| ACAGGCACAGGTGGCCCGTT+AGG | - | chr4_2:68209590-68209609 | None:intergenic | 65.0% | |
| CTCGAGCGAACAGGCACAGG+TGG | - | chr4_2:68209599-68209618 | None:intergenic | 65.0% | |
| CGTGGCCCTCATGATGCTCC+TGG | + | chr4_2:68209656-68209675 | Msa0617600:CDS | 65.0% | |
| !! | AGAGTGGGGCGCCGCACCAG+AGG | + | chr4_2:68209448-68209467 | Msa0617600:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 68204184 | 68210130 | 68204184 | ID=Msa0617600;Name=Msa0617600 |
| chr4_2 | mRNA | 68204184 | 68210130 | 68204184 | ID=Msa0617600-mRNA-1;Parent=Msa0617600;Name=Msa0617600-mRNA-1;_AED=0.07;_eAED=0.07;_QI=348|1|1|1|1|1|7|364|617 |
| chr4_2 | exon | 68204184 | 68204807 | 68204184 | ID=Msa0617600-mRNA-1:exon:19564;Parent=Msa0617600-mRNA-1 |
| chr4_2 | exon | 68205369 | 68205607 | 68205369 | ID=Msa0617600-mRNA-1:exon:19565;Parent=Msa0617600-mRNA-1 |
| chr4_2 | exon | 68206055 | 68206256 | 68206055 | ID=Msa0617600-mRNA-1:exon:19566;Parent=Msa0617600-mRNA-1 |
| chr4_2 | exon | 68206336 | 68206413 | 68206336 | ID=Msa0617600-mRNA-1:exon:19567;Parent=Msa0617600-mRNA-1 |
| chr4_2 | exon | 68206501 | 68206684 | 68206501 | ID=Msa0617600-mRNA-1:exon:19568;Parent=Msa0617600-mRNA-1 |
| chr4_2 | exon | 68207079 | 68207245 | 68207079 | ID=Msa0617600-mRNA-1:exon:19569;Parent=Msa0617600-mRNA-1 |
| chr4_2 | exon | 68209059 | 68210130 | 68209059 | ID=Msa0617600-mRNA-1:exon:19570;Parent=Msa0617600-mRNA-1 |
| chr4_2 | five_prime_UTR | 68204184 | 68204531 | 68204184 | ID=Msa0617600-mRNA-1:five_prime_utr;Parent=Msa0617600-mRNA-1 |
| chr4_2 | CDS | 68204532 | 68204807 | 68204532 | ID=Msa0617600-mRNA-1:cds;Parent=Msa0617600-mRNA-1 |
| chr4_2 | CDS | 68205369 | 68205607 | 68205369 | ID=Msa0617600-mRNA-1:cds;Parent=Msa0617600-mRNA-1 |
| chr4_2 | CDS | 68206055 | 68206256 | 68206055 | ID=Msa0617600-mRNA-1:cds;Parent=Msa0617600-mRNA-1 |
| chr4_2 | CDS | 68206336 | 68206413 | 68206336 | ID=Msa0617600-mRNA-1:cds;Parent=Msa0617600-mRNA-1 |
| chr4_2 | CDS | 68206501 | 68206684 | 68206501 | ID=Msa0617600-mRNA-1:cds;Parent=Msa0617600-mRNA-1 |
| chr4_2 | CDS | 68207079 | 68207245 | 68207079 | ID=Msa0617600-mRNA-1:cds;Parent=Msa0617600-mRNA-1 |
| chr4_2 | CDS | 68209059 | 68209766 | 68209059 | ID=Msa0617600-mRNA-1:cds;Parent=Msa0617600-mRNA-1 |
| chr4_2 | three_prime_UTR | 68209767 | 68210130 | 68209767 | ID=Msa0617600-mRNA-1:three_prime_utr;Parent=Msa0617600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
