Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306870 | sp|Q8L612|MACP1_ARATH | 44.160 | 625 | 318 | 12 | 7 | 614 | 8 | 618 | 4.39e-179 | 524 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306870 | G7LHB4 | 98.546 | 619 | 7 | 1 | 1 | 617 | 1 | 619 | 0.0 | 1258 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0617600 | Msa1306870 | 0.878489 | 2.695077e-69 | -8.615850e-47 |
| Msa0563780 | Msa1306870 | 0.891063 | 5.588764e-74 | -8.615850e-47 |
| Msa0577540 | Msa1306870 | 0.943556 | 9.721041e-103 | -8.615850e-47 |
| Msa0940400 | Msa1306870 | -0.801086 | 1.062659e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306870 | MtrunA17_Chr8g0377631 | 98.546 | 619 | 7 | 1 | 1 | 617 | 1 | 619 | 0.0 | 1258 |
| Msa1306870 | MtrunA17_Chr3g0122211 | 77.215 | 632 | 115 | 7 | 1 | 616 | 1 | 619 | 0.0 | 978 |
| Msa1306870 | MtrunA17_Chr8g0391931 | 45.381 | 617 | 305 | 11 | 3 | 615 | 1 | 589 | 0.0 | 535 |
| Msa1306870 | MtrunA17_Chr2g0277061 | 45.867 | 617 | 291 | 13 | 7 | 614 | 11 | 593 | 0.0 | 528 |
| Msa1306870 | MtrunA17_Chr8g0385121 | 44.698 | 613 | 293 | 12 | 11 | 614 | 13 | 588 | 1.97e-167 | 490 |
| Msa1306870 | MtrunA17_Chr4g0046841 | 42.532 | 616 | 313 | 13 | 11 | 614 | 25 | 611 | 1.85e-162 | 478 |
| Msa1306870 | MtrunA17_Chr4g0013011 | 39.769 | 606 | 330 | 7 | 11 | 616 | 14 | 584 | 2.86e-145 | 433 |
| Msa1306870 | MtrunA17_Chr2g0284691 | 39.542 | 612 | 297 | 9 | 11 | 616 | 22 | 566 | 1.09e-137 | 413 |
| Msa1306870 | MtrunA17_Chr8g0385131 | 35.855 | 608 | 331 | 11 | 11 | 616 | 16 | 566 | 6.12e-118 | 362 |
| Msa1306870 | MtrunA17_Chr8g0385181 | 33.990 | 609 | 328 | 11 | 11 | 616 | 16 | 553 | 8.33e-106 | 330 |
| Msa1306870 | MtrunA17_Chr8g0385171 | 33.125 | 320 | 167 | 8 | 11 | 327 | 16 | 291 | 1.15e-46 | 166 |
| Msa1306870 | MtrunA17_Chr8g0385161 | 36.842 | 285 | 138 | 6 | 332 | 616 | 2 | 244 | 5.03e-46 | 163 |
| Msa1306870 | MtrunA17_Chr7g0274871 | 40.397 | 151 | 71 | 4 | 11 | 159 | 130 | 263 | 3.62e-24 | 102 |
| Msa1306870 | MtrunA17_Chr8g0385141 | 32.773 | 119 | 79 | 1 | 124 | 241 | 12 | 130 | 1.46e-17 | 80.9 |
| Msa1306870 | MtrunA17_Chr8g0385151 | 51.064 | 47 | 23 | 0 | 282 | 328 | 2 | 48 | 9.64e-12 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306870 | AT1G14780.1 | 44.160 | 625 | 318 | 12 | 7 | 614 | 8 | 618 | 4.47e-180 | 524 |
| Msa1306870 | AT4G24290.2 | 44.681 | 611 | 300 | 11 | 10 | 614 | 13 | 591 | 1.02e-178 | 520 |
| Msa1306870 | AT4G24290.3 | 44.681 | 611 | 300 | 11 | 10 | 614 | 13 | 591 | 1.02e-178 | 520 |
| Msa1306870 | AT1G28380.1 | 42.693 | 609 | 321 | 8 | 11 | 614 | 18 | 603 | 1.20e-159 | 471 |
| Msa1306870 | AT1G29690.1 | 39.837 | 615 | 288 | 9 | 9 | 616 | 22 | 561 | 3.74e-144 | 430 |
| Msa1306870 | AT4G24290.1 | 44.940 | 336 | 168 | 7 | 10 | 340 | 13 | 336 | 7.19e-91 | 285 |
Find 189 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACACATCTCCTCCTCTTT+TGG | 0.177147 | 8_4:-1811178 | None:intergenic |
| CAATGTATGGTTAGGGTTAA+AGG | 0.228417 | 8_4:-1809102 | None:intergenic |
| GAGAGTGGCATTGGAATCTT+TGG | 0.230238 | 8_4:+1809213 | Msa1306870:CDS |
| TTAACGTTACGTAACGTTAA+AGG | 0.233271 | 8_4:-1808965 | None:intergenic |
| GGCATTGAAGAATTAAATTT+AGG | 0.254840 | 8_4:+1814585 | Msa1306870:three_prime_UTR |
| AGTTTGCATTGTTGGATTAT+TGG | 0.259496 | 8_4:+1814404 | Msa1306870:CDS |
| GAGAATATTCGGTGTGATAA+AGG | 0.275511 | 8_4:+1809400 | Msa1306870:CDS |
| ATCTGACTGGTTCTAGGAAT+TGG | 0.283000 | 8_4:-1813907 | None:intergenic |
| GCTAGATGTTTCTGAAATAC+TGG | 0.288805 | 8_4:-1811043 | None:intergenic |
| TTCACTGCAATTCTGCTGCT+TGG | 0.301159 | 8_4:+1811852 | Msa1306870:CDS |
| TATTATGCTGCAAATCAAAA+TGG | 0.306003 | 8_4:+1814722 | Msa1306870:three_prime_UTR |
| TGGTTCTAGGAATTGGTTAC+TGG | 0.310420 | 8_4:-1813900 | None:intergenic |
| TTAGGATATACTCCTAGTTC+TGG | 0.310613 | 8_4:+1814603 | Msa1306870:three_prime_UTR |
| TCTTCCATCTGACTGGTTCT+AGG | 0.312397 | 8_4:-1813913 | None:intergenic |
| CATTGGAATCTTTGGGTAAA+GGG | 0.330262 | 8_4:+1809221 | Msa1306870:CDS |
| GAAGAGAGGATCATCTTGTT+TGG | 0.330487 | 8_4:-1813821 | None:intergenic |
| GTGATAAAGGGGATCGAATT+CGG | 0.336226 | 8_4:+1809413 | Msa1306870:CDS |
| TAGTTAATCAATGTATGGTT+AGG | 0.345853 | 8_4:-1809110 | None:intergenic |
| TCACTGCAATTCTGCTGCTT+GGG | 0.347746 | 8_4:+1811853 | Msa1306870:CDS |
| TCGCTTCTGACTGGAATTCC+TGG | 0.348233 | 8_4:+1811279 | Msa1306870:CDS |
| TCAAGCACAGTCACTCAAAT+TGG | 0.363216 | 8_4:+1811199 | Msa1306870:CDS |
| GTTGGATTATTGGTGATTCT+AGG | 0.363354 | 8_4:+1814414 | Msa1306870:exon |
| AACTTGAATATGATCGCTTC+AGG | 0.369856 | 8_4:-1811243 | None:intergenic |
| TTTGGGTAAAGGGTTTGATT+TGG | 0.371576 | 8_4:+1809231 | Msa1306870:CDS |
| GCAGGTAAAGTTTGCATTGT+TGG | 0.373500 | 8_4:+1814396 | Msa1306870:CDS |
| TACTGTAATCAAAGGTGTTT+CGG | 0.379152 | 8_4:+1809378 | Msa1306870:CDS |
| CCGCAATCATTCAACCAGTT+AGG | 0.384521 | 8_4:-1813974 | None:intergenic |
| GGTTGGCCTTCGCTTGTACC+TGG | 0.386698 | 8_4:+1813745 | Msa1306870:CDS |
| TCGTCAAGCATGACCCTAAC+TGG | 0.393408 | 8_4:+1813960 | Msa1306870:CDS |
| TGACTAAGATAGCCACTTCC+AGG | 0.394554 | 8_4:-1811297 | None:intergenic |
| AGAATATTCGGTGTGATAAA+GGG | 0.394686 | 8_4:+1809401 | Msa1306870:CDS |
| AGGAGGCATTTAGAGGATCT+TGG | 0.398026 | 8_4:+1810822 | Msa1306870:CDS |
| AAGGTGTTTCGGAGAATATT+CGG | 0.404078 | 8_4:+1809389 | Msa1306870:CDS |
| CCGATTTCCTCGCTTCTGAC+TGG | 0.404874 | 8_4:+1811270 | Msa1306870:CDS |
| ACATAACTAATTGTACTATA+CGG | 0.407090 | 8_4:+1814083 | Msa1306870:CDS |
| AAGAGAGGATCATCTTGTTT+GGG | 0.410103 | 8_4:-1813820 | None:intergenic |
| TTTGAGTATGGAGGTGGAAG+AGG | 0.412109 | 8_4:+1809183 | Msa1306870:exon |
| CTCATGATGCTCCTGGCCAT+TGG | 0.412968 | 8_4:+1814326 | Msa1306870:CDS |
| AATGTATGGTTAGGGTTAAA+GGG | 0.416606 | 8_4:-1809101 | None:intergenic |
| CATGTAAATATCCTTTCAAA+AGG | 0.421252 | 8_4:+1814519 | Msa1306870:three_prime_UTR |
| GGGTGGTAAGATAGGATTGC+AGG | 0.431154 | 8_4:+1814378 | Msa1306870:CDS |
| AGTGCAGTTGGAGCCTGCTT+TGG | 0.431391 | 8_4:-1814211 | None:intergenic |
| GTAGAGCTAATATGAAGCTT+TGG | 0.431914 | 8_4:-1811877 | None:intergenic |
| GGGTGAAGTGAAGAAGATAC+TGG | 0.435581 | 8_4:-1808880 | None:intergenic |
| GGAGGTGTTTACATTGTAAC+TGG | 0.436245 | 8_4:+1813995 | Msa1306870:CDS |
| CGCCACATAGATTGTATGCT+CGG | 0.439529 | 8_4:-1813857 | None:intergenic |
| ATTGAGGAATGGAAGATAAG+AGG | 0.439565 | 8_4:-1808901 | None:intergenic |
| GTCACTGAGGGTGGTAAGAT+AGG | 0.443404 | 8_4:+1814370 | Msa1306870:CDS |
| CGCAATCATTCAACCAGTTA+GGG | 0.443890 | 8_4:-1813973 | None:intergenic |
| AAAGGGCGAATTGTAATGAT+AGG | 0.445036 | 8_4:+1814689 | Msa1306870:three_prime_UTR |
| GCAGTTGGAGCCTGCTTTGG+TGG | 0.446081 | 8_4:-1814208 | None:intergenic |
| TGCTGCTGCTCCACCAAAGC+AGG | 0.451153 | 8_4:+1814198 | Msa1306870:CDS |
| ACAGGCACAGGTGGCCCGTT+AGG | 0.452278 | 8_4:-1814250 | None:intergenic |
| AGATTCCTCCCGGTGATGTC+AGG | 0.452304 | 8_4:+1810802 | Msa1306870:CDS |
| AGTGAAGAAGATACTGGAAA+TGG | 0.453068 | 8_4:-1808874 | None:intergenic |
| TGATGTACTTGAATTCAATC+AGG | 0.454142 | 8_4:+1809444 | Msa1306870:CDS |
| AACATGGGCGCCCATTGCCT+TGG | 0.456623 | 8_4:-1811784 | None:intergenic |
| TGATGTCAGGAGGCATTTAG+AGG | 0.456917 | 8_4:+1810815 | Msa1306870:CDS |
| GGAAGAGGGTATTGAGAGAG+TGG | 0.461485 | 8_4:+1809198 | Msa1306870:CDS |
| GCATTGGAATCTTTGGGTAA+AGG | 0.461487 | 8_4:+1809220 | Msa1306870:CDS |
| TACTATACGGAAGTCGGAGT+GGG | 0.462446 | 8_4:+1814096 | Msa1306870:CDS |
| TCAAGAGGAAGTAAAGAAAT+CGG | 0.462918 | 8_4:+1810212 | Msa1306870:CDS |
| ATCACACGGTTAAAGACCTC+TGG | 0.464602 | 8_4:-1810997 | None:intergenic |
| GGGTATTGAGAGAGTGGCAT+TGG | 0.469106 | 8_4:+1809204 | Msa1306870:CDS |
| GCCACATAGATTGTATGCTC+GGG | 0.469485 | 8_4:-1813856 | None:intergenic |
| GTCTTCCTCTGTAGTGAAGA+AGG | 0.470468 | 8_4:-1810873 | None:intergenic |
| TTGAGTATGGAGGTGGAAGA+GGG | 0.472470 | 8_4:+1809184 | Msa1306870:exon |
| ACTATTATTTGCTCCAAAAG+AGG | 0.472552 | 8_4:+1811165 | Msa1306870:CDS |
| TATTGTAAATCTTCGGGAGA+TGG | 0.473016 | 8_4:-1811742 | None:intergenic |
| GAGAATCTCTTCCATCTGAC+TGG | 0.474626 | 8_4:-1813920 | None:intergenic |
| TTGAGGAATGGAAGATAAGA+GGG | 0.477143 | 8_4:-1808900 | None:intergenic |
| AACCCTAGTTAATCAATGTA+TGG | 0.479138 | 8_4:-1809115 | None:intergenic |
| GAGAGGCAGTTCGCAAAACA+TGG | 0.481092 | 8_4:-1811800 | None:intergenic |
| TAACCATACATTGATTAACT+AGG | 0.481863 | 8_4:+1809112 | Msa1306870:five_prime_UTR |
| ACTCTGGCATTTATCCTAAC+GGG | 0.485310 | 8_4:+1814236 | Msa1306870:CDS |
| AGTTTCAAATTCCAAGGCAA+TGG | 0.486879 | 8_4:+1811773 | Msa1306870:CDS |
| CGTGGCCCTCATGATGCTCC+TGG | 0.488042 | 8_4:+1814319 | Msa1306870:CDS |
| GGTGGTAAGTGAACAGAAAC+CGG | 0.489122 | 8_4:+1813721 | Msa1306870:intron |
| CCAGTCAGAAGCGAGGAAAT+CGG | 0.490740 | 8_4:-1811270 | None:intergenic |
| GTTTACCTAGACAATGAAGC+TGG | 0.491289 | 8_4:-1810252 | None:intergenic |
| AACCATACATTGATTAACTA+GGG | 0.491332 | 8_4:+1809113 | Msa1306870:five_prime_UTR |
| AGTAGTTTACTCGAGCGAAC+AGG | 0.491644 | 8_4:-1814268 | None:intergenic |
| GTTTCAAATTCCAAGGCAAT+GGG | 0.492656 | 8_4:+1811774 | Msa1306870:CDS |
| AGTTAATCAATGTATGGTTA+GGG | 0.498421 | 8_4:-1809109 | None:intergenic |
| CTATGTGAGTACCATATGTC+TGG | 0.499457 | 8_4:-1810719 | None:intergenic |
| GCAGCAGAATTGCAGTGAAA+GGG | 0.504493 | 8_4:-1811848 | None:intergenic |
| TTCTGGCCCAAGTAATAATG+AGG | 0.507924 | 8_4:-1814786 | None:intergenic |
| AACTCTGGCATTTATCCTAA+CGG | 0.512099 | 8_4:+1814235 | Msa1306870:CDS |
| GGCAGGTTCATCCAGACATA+TGG | 0.513057 | 8_4:+1810708 | Msa1306870:intron |
| AGGTTTGCAAAGGGAATTCG+TGG | 0.514538 | 8_4:+1809271 | Msa1306870:CDS |
| GAAGCTGGATCCCACTGAGC+TGG | 0.519884 | 8_4:-1810237 | None:intergenic |
| TGATGCTCCTGGCCATTGGT+TGG | 0.521972 | 8_4:+1814330 | Msa1306870:CDS |
| AGCAGCAGAATTGCAGTGAA+AGG | 0.525562 | 8_4:-1811849 | None:intergenic |
| TGCTTGATGAACAAAATAAG+AGG | 0.526394 | 8_4:+1809326 | Msa1306870:CDS |
| GAAATCGAAATGAAAGTTCG+AGG | 0.526834 | 8_4:-1809011 | None:intergenic |
| TTTAGGTTAAGGTTTGCAAA+GGG | 0.527453 | 8_4:+1809262 | Msa1306870:CDS |
| TAATAGTAAAAGTAAGAGGT+TGG | 0.527538 | 8_4:+1809300 | Msa1306870:CDS |
| AACTGCCTCTCAGGCATCAG+CGG | 0.527628 | 8_4:+1811812 | Msa1306870:CDS |
| GACGGCAGATAGCAAACATA+AGG | 0.531482 | 8_4:+1810893 | Msa1306870:CDS |
| ATTATCATAGCTATGCTGCC+TGG | 0.531723 | 8_4:-1814747 | None:intergenic |
| CTGCAAATCAAAATGGATCC+AGG | 0.531911 | 8_4:+1814729 | Msa1306870:three_prime_UTR |
| GGCCTTCGCTTGTACCTGGA+GGG | 0.540226 | 8_4:+1813749 | Msa1306870:CDS |
| GCAAAGGGAATTCGTGGGAG+TGG | 0.541117 | 8_4:+1809277 | Msa1306870:CDS |
| AGAGTGGCATTGGAATCTTT+GGG | 0.541778 | 8_4:+1809214 | Msa1306870:CDS |
| ATGCCAGAGTTAAGTGCAGT+TGG | 0.542829 | 8_4:-1814223 | None:intergenic |
| TCAACGAAAGGAGTTAACTT+TGG | 0.545612 | 8_4:-1809078 | None:intergenic |
| GCTGTAACCAACCAATGGCC+AGG | 0.549195 | 8_4:-1814337 | None:intergenic |
| AGAAATCGGTTCCAGCTCAG+TGG | 0.550705 | 8_4:+1810226 | Msa1306870:CDS |
| AAATGCCTCCTGACATCACC+GGG | 0.554590 | 8_4:-1810810 | None:intergenic |
| CTGACTGGAATTCCTGGAAG+TGG | 0.554762 | 8_4:+1811285 | Msa1306870:CDS |
| ACAGTAGCTCCACCAGCTCC+AGG | 0.554800 | 8_4:-1809361 | None:intergenic |
| GTGGTAGGCATGGCTGTTGG+AGG | 0.555126 | 8_4:+1810741 | Msa1306870:CDS |
| GGGATCCAGCTTCATTGTCT+AGG | 0.555304 | 8_4:+1810247 | Msa1306870:CDS |
| TTCTCCGCTTGTACTTCAAG+AGG | 0.563723 | 8_4:+1810197 | Msa1306870:CDS |
| TGGCCTTCGCTTGTACCTGG+AGG | 0.564843 | 8_4:+1813748 | Msa1306870:CDS |
| TTACTCGAGCGAACAGGCAC+AGG | 0.565735 | 8_4:-1814262 | None:intergenic |
| ACTTCCTCTTGAAGTACAAG+CGG | 0.569301 | 8_4:-1810201 | None:intergenic |
| GTGGTAATAGTAAAAGTAAG+AGG | 0.569684 | 8_4:+1809296 | Msa1306870:CDS |
| AATTCCTAGAACCAGTCAGA+TGG | 0.572976 | 8_4:+1813909 | Msa1306870:CDS |
| ACTAAAATATCTCCAGAACT+AGG | 0.573297 | 8_4:-1814615 | None:intergenic |
| GTAAATTGTTGATTGAGGAA+TGG | 0.575787 | 8_4:-1808912 | None:intergenic |
| TAAATGCCTCCTGACATCAC+CGG | 0.575820 | 8_4:-1810811 | None:intergenic |
| GAATTGCAGTGAAAGGGAAG+AGG | 0.576763 | 8_4:-1811842 | None:intergenic |
| GCTCCAACTGCACTTAACTC+TGG | 0.578400 | 8_4:+1814220 | Msa1306870:CDS |
| CTCGAGCGAACAGGCACAGG+TGG | 0.581565 | 8_4:-1814259 | None:intergenic |
| TCTTCCTCTGTAGTGAAGAA+GGG | 0.584229 | 8_4:-1810872 | None:intergenic |
| GCTGCTAAGCTTGTCACTGA+GGG | 0.585435 | 8_4:+1814358 | Msa1306870:CDS |
| GCTAAGCTTGTCACTGAGGG+TGG | 0.587930 | 8_4:+1814361 | Msa1306870:CDS |
| GCTTGATGAACAAAATAAGA+GGG | 0.588156 | 8_4:+1809327 | Msa1306870:CDS |
| GGAGTGGGGCGCCGCACCAG+AGG | 0.589221 | 8_4:+1814111 | Msa1306870:CDS |
| TACTCACATAGTGGTAGGCA+TGG | 0.589782 | 8_4:+1810731 | Msa1306870:CDS |
| GAAGGTGGTGAATATTAGAT+CGG | 0.590313 | 8_4:-1808989 | None:intergenic |
| TGCCCTCCAGGTACAAGCGA+AGG | 0.591411 | 8_4:-1813751 | None:intergenic |
| AAGATGATCCTCTCTTCAGA+TGG | 0.594382 | 8_4:+1813827 | Msa1306870:CDS |
| GAATATTCGGTGTGATAAAG+GGG | 0.596081 | 8_4:+1809402 | Msa1306870:CDS |
| AGAGGATCATCTTGTTTGGG+AGG | 0.596904 | 8_4:-1813817 | None:intergenic |
| GACATATGGTACTCACATAG+TGG | 0.597421 | 8_4:+1810722 | Msa1306870:CDS |
| GAAATCGGTTCCAGCTCAGT+GGG | 0.597458 | 8_4:+1810227 | Msa1306870:CDS |
| CATTCATCAAAGATTCCTCC+CGG | 0.599259 | 8_4:+1810792 | Msa1306870:CDS |
| ATAGTGGTAGGCATGGCTGT+TGG | 0.602545 | 8_4:+1810738 | Msa1306870:CDS |
| TTCCTCCCGGTGATGTCAGG+AGG | 0.603487 | 8_4:+1810805 | Msa1306870:CDS |
| ATTTGATGTCAGCGGCGTCA+CGG | 0.604538 | 8_4:-1810122 | None:intergenic |
| TAATTGTACTATACGGAAGT+CGG | 0.605913 | 8_4:+1814090 | Msa1306870:CDS |
| TACAAGCGAAGGCCAACCAC+CGG | 0.616819 | 8_4:-1813740 | None:intergenic |
| TATGGTACTCACATAGTGGT+AGG | 0.617208 | 8_4:+1810726 | Msa1306870:CDS |
| TTTCTCCGCTGATGCCTGAG+AGG | 0.617256 | 8_4:-1811817 | None:intergenic |
| ATTATTTGCTCCAAAAGAGG+AGG | 0.618881 | 8_4:+1811168 | Msa1306870:CDS |
| CAATGGCCAGGAGCATCATG+AGG | 0.619232 | 8_4:-1814325 | None:intergenic |
| AGCTCATTATCAGAGGGAGT+TGG | 0.620316 | 8_4:+1814023 | Msa1306870:CDS |
| ATGATCGCTTCAGGATTCGA+AGG | 0.621664 | 8_4:-1811234 | None:intergenic |
| AGGGTTAAAGGGTCAACGAA+AGG | 0.622420 | 8_4:-1809090 | None:intergenic |
| CCCCGAGCATACAATCTATG+TGG | 0.622841 | 8_4:+1813855 | Msa1306870:CDS |
| GGATTATTGGTGATTCTAGG+TGG | 0.626254 | 8_4:+1814417 | Msa1306870:exon |
| AGAGGCAGTTCGCAAAACAT+GGG | 0.626848 | 8_4:-1811799 | None:intergenic |
| TCGAAATGAAAGTTCGAGGA+AGG | 0.628457 | 8_4:-1809007 | None:intergenic |
| CCACATAGATTGTATGCTCG+GGG | 0.631306 | 8_4:-1813855 | None:intergenic |
| TCACACGGTTAAAGACCTCT+GGG | 0.633122 | 8_4:-1810996 | None:intergenic |
| AGTGAACAGAAACCGGTGGT+TGG | 0.633482 | 8_4:+1813728 | Msa1306870:CDS |
| GGTGGAGCTACTGTAATCAA+AGG | 0.633778 | 8_4:+1809370 | Msa1306870:CDS |
| AAATGAAAGTTCGAGGAAGG+TGG | 0.638854 | 8_4:-1809004 | None:intergenic |
| AGCATACAATCTATGTGGCG+AGG | 0.640660 | 8_4:+1813860 | Msa1306870:CDS |
| AGCTGCTAAGCTTGTCACTG+AGG | 0.642027 | 8_4:+1814357 | Msa1306870:CDS |
| TAGCAGCTGTAACCAACCAA+TGG | 0.649488 | 8_4:-1814342 | None:intergenic |
| GGTGCACAGCTCATTATCAG+AGG | 0.649959 | 8_4:+1814016 | Msa1306870:CDS |
| CCTAACTGGTTGAATGATTG+CGG | 0.650368 | 8_4:+1813974 | Msa1306870:CDS |
| GGGTTGAGCCATCTGAAGAG+AGG | 0.650782 | 8_4:-1813835 | None:intergenic |
| GTGCACAGCTCATTATCAGA+GGG | 0.653438 | 8_4:+1814017 | Msa1306870:CDS |
| AGAGCATTAAAATAGCCAGA+AGG | 0.654613 | 8_4:-1810075 | None:intergenic |
| TGGTGTTTGATTGCATCACA+CGG | 0.656883 | 8_4:-1811011 | None:intergenic |
| GTACTATACGGAAGTCGGAG+TGG | 0.657236 | 8_4:+1814095 | Msa1306870:CDS |
| TTCTTCACTACAGAGGAAGA+CGG | 0.659925 | 8_4:+1810875 | Msa1306870:CDS |
| AGCAAGATATTTGATGTCAG+CGG | 0.663279 | 8_4:-1810130 | None:intergenic |
| AATGGCCAGGAGCATCATGA+GGG | 0.667616 | 8_4:-1814324 | None:intergenic |
| GAAGCCCTTCTTCACTACAG+AGG | 0.667777 | 8_4:+1810868 | Msa1306870:CDS |
| GGTTTGCAAAGGGAATTCGT+GGG | 0.672055 | 8_4:+1809272 | Msa1306870:CDS |
| AGTACAGTATACAAAATGAG+TGG | 0.676644 | 8_4:+1814550 | Msa1306870:three_prime_UTR |
| TAAATACGTCGAGACAGCTG+AGG | 0.683978 | 8_4:+1814291 | Msa1306870:CDS |
| TCTCTATATGTAGGTCCCAG+AGG | 0.687673 | 8_4:+1810981 | Msa1306870:intron |
| GCTTCATATTAGCTCTACAG+AGG | 0.691226 | 8_4:+1811882 | Msa1306870:CDS |
| AGGAATTCCAGTCAGAAGCG+AGG | 0.695982 | 8_4:-1811277 | None:intergenic |
| AATGAGTGGCTGTTGACATG+AGG | 0.699298 | 8_4:+1814564 | Msa1306870:three_prime_UTR |
| ACTATACGGAAGTCGGAGTG+GGG | 0.706058 | 8_4:+1814097 | Msa1306870:CDS |
| GAAAAGGGTAACATAAACTG+CGG | 0.710098 | 8_4:-1809045 | None:intergenic |
| TGAAATACTGGTAAACTGTG+TGG | 0.710464 | 8_4:-1811031 | None:intergenic |
| AACTGGTTGAATGATTGCGG+AGG | 0.722726 | 8_4:+1813977 | Msa1306870:CDS |
| GCAACACTAAATGATAACCA+CGG | 0.728843 | 8_4:-1814467 | None:intergenic |
| GGTAAGTGAACAGAAACCGG+TGG | 0.737124 | 8_4:+1813724 | Msa1306870:CDS |
| TGCCTCCTGACATCACCGGG+AGG | 0.750953 | 8_4:-1810807 | None:intergenic |
| CTGAAGTGATAAGATCACCG+TGG | 0.787954 | 8_4:+1814450 | Msa1306870:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCATTTTGTTATTATTA+AGG | + | chr8_4:1811680-1811699 | Msa1306870:intron | 10.0% |
| !! | TAAAAAATATTGTAAATCTT+CGG | - | chr8_4:1811752-1811771 | None:intergenic | 10.0% |
| !!! | TTTAAAAAGTTGTCTAATTT+TGG | - | chr8_4:1809686-1809705 | None:intergenic | 15.0% |
| !! | AAAAAATATTGTAAATCTTC+GGG | - | chr8_4:1811751-1811770 | None:intergenic | 15.0% |
| !!! | TCTTTTATTTATATATCAAG+TGG | + | chr8_4:1812437-1812456 | Msa1306870:intron | 15.0% |
| !! | TGTAAAAAATGTTAAGAAAA+GGG | + | chr8_4:1814672-1814691 | Msa1306870:three_prime_UTR | 15.0% |
| !!! | TGTTTTGTTTTGTTTTGTTT+TGG | - | chr8_4:1808937-1808956 | None:intergenic | 20.0% |
| !! | AAAAATCAGAACAAAAAAAC+AGG | - | chr8_4:1809159-1809178 | None:intergenic | 20.0% |
| !!! | TGATTTTTCATTTTTGAGTA+TGG | + | chr8_4:1809171-1809190 | Msa1306870:exon | 20.0% |
| !!! | TGTTATTTGAATGTCAAATT+TGG | + | chr8_4:1809656-1809675 | Msa1306870:intron | 20.0% |
| !! | GTTATTTGAATGTCAAATTT+GGG | + | chr8_4:1809657-1809676 | Msa1306870:intron | 20.0% |
| !! | GTTAATCATGTTTAAATTTG+TGG | + | chr8_4:1809756-1809775 | Msa1306870:intron | 20.0% |
| !! | ATGAAATGGTAGATTATATT+TGG | - | chr8_4:1809797-1809816 | None:intergenic | 20.0% |
| !! | ATATCAATGATTAAGAAATC+TGG | + | chr8_4:1809942-1809961 | Msa1306870:intron | 20.0% |
| !! | TATCAATGATTAAGAAATCT+GGG | + | chr8_4:1809943-1809962 | Msa1306870:intron | 20.0% |
| !! | CAAAAATACTAAATCTTGTA+GGG | - | chr8_4:1810439-1810458 | None:intergenic | 20.0% |
| !!! | AATCAGATTCTTTTATCAAT+TGG | - | chr8_4:1810477-1810496 | None:intergenic | 20.0% |
| !!! | TTTGAATGATGTGTAATTTT+GGG | + | chr8_4:1810652-1810671 | Msa1306870:intron | 20.0% |
| !! | AATACTAATAAACCTAAACT+GGG | - | chr8_4:1811389-1811408 | None:intergenic | 20.0% |
| !! | AAATACTAATAAACCTAAAC+TGG | - | chr8_4:1811390-1811409 | None:intergenic | 20.0% |
| !!! | AAAACATATTAGTTTTTCTG+TGG | - | chr8_4:1811580-1811599 | None:intergenic | 20.0% |
| !!! | ACAGAAAAACTAATATGTTT+TGG | + | chr8_4:1811579-1811598 | Msa1306870:intron | 20.0% |
| !! | AGAAAAAATAACTAGTTGAT+GGG | - | chr8_4:1812810-1812829 | None:intergenic | 20.0% |
| !! | TGTATTAATCTTAGTGATAT+TGG | - | chr8_4:1812906-1812925 | None:intergenic | 20.0% |
| !! | TATATCTAGTAACTTGAAAA+GGG | + | chr8_4:1813290-1813309 | Msa1306870:intron | 20.0% |
| !! | AACTTACCTATAAAAATGAA+AGG | - | chr8_4:1813657-1813676 | None:intergenic | 20.0% |
| !!! | TTATGGTATTTTGTACAAAA+TGG | + | chr8_4:1813696-1813715 | Msa1306870:intron | 20.0% |
| !! | ACATAACTAATTGTACTATA+CGG | + | chr8_4:1814083-1814102 | Msa1306870:CDS | 20.0% |
| !! | CTGTAAAAAATGTTAAGAAA+AGG | + | chr8_4:1814671-1814690 | Msa1306870:three_prime_UTR | 20.0% |
| !!! | TTTTGGTAAATTGTTGATTG+AGG | - | chr8_4:1808920-1808939 | None:intergenic | 25.0% |
| ! | AGTTAATCAATGTATGGTTA+GGG | - | chr8_4:1809112-1809131 | None:intergenic | 25.0% |
| ! | TAGTTAATCAATGTATGGTT+AGG | - | chr8_4:1809113-1809132 | None:intergenic | 25.0% |
| !! | TAACCATACATTGATTAACT+AGG | + | chr8_4:1809112-1809131 | Msa1306870:five_prime_UTR | 25.0% |
| !! | AACCATACATTGATTAACTA+GGG | + | chr8_4:1809113-1809132 | Msa1306870:five_prime_UTR | 25.0% |
| !!! | TTTTTCATTTTTGAGTATGG+AGG | + | chr8_4:1809174-1809193 | Msa1306870:exon | 25.0% |
| ! | TAATAGTAAAAGTAAGAGGT+TGG | + | chr8_4:1809300-1809319 | Msa1306870:CDS | 25.0% |
| ! | ATTTGAAAAGTTGAGAATTG+AGG | + | chr8_4:1809734-1809753 | Msa1306870:intron | 25.0% |
| !!! | ACATTTTGTTTTAAAAACCC+TGG | + | chr8_4:1809891-1809910 | Msa1306870:intron | 25.0% |
| ! | TTCAACTTCTTATATAACCA+GGG | - | chr8_4:1809911-1809930 | None:intergenic | 25.0% |
| ! | ATTCAACTTCTTATATAACC+AGG | - | chr8_4:1809912-1809931 | None:intergenic | 25.0% |
| !!! | ATCAAATATCTTGCTTTTGA+TGG | + | chr8_4:1810138-1810157 | Msa1306870:CDS | 25.0% |
| ! | CCAAAAATACTAAATCTTGT+AGG | - | chr8_4:1810440-1810459 | None:intergenic | 25.0% |
| !! | CCTACAAGATTTAGTATTTT+TGG | + | chr8_4:1810437-1810456 | Msa1306870:intron | 25.0% |
| ! | ATCTGATTTCTTCTTACTTT+CGG | + | chr8_4:1810489-1810508 | Msa1306870:intron | 25.0% |
| ! | TCACTTACAAATCATTCTAA+CGG | - | chr8_4:1810603-1810622 | None:intergenic | 25.0% |
| ! | AAATTACACATCATTCAAAC+CGG | - | chr8_4:1810651-1810670 | None:intergenic | 25.0% |
| !! | GTTTGAATGATGTGTAATTT+TGG | + | chr8_4:1810651-1810670 | Msa1306870:intron | 25.0% |
| !! | GTAACCTCAATATGAATTTT+TGG | + | chr8_4:1810934-1810953 | Msa1306870:intron | 25.0% |
| ! | GAAACCAAAAATTCATATTG+AGG | - | chr8_4:1810941-1810960 | None:intergenic | 25.0% |
| ! | CATAATGTATTGCTTTATCT+TGG | + | chr8_4:1811131-1811150 | Msa1306870:intron | 25.0% |
| ! | ATCTTGTGTGTTTATGTTTA+TGG | - | chr8_4:1811507-1811526 | None:intergenic | 25.0% |
| ! | TTCTAAATGTGTACAAAATG+TGG | + | chr8_4:1811538-1811557 | Msa1306870:intron | 25.0% |
| !!! | TTTTAGAGTTTCAAATTCCA+AGG | + | chr8_4:1811767-1811786 | Msa1306870:CDS | 25.0% |
| ! | TATATATCTAAAAGGCAGAA+GGG | - | chr8_4:1812121-1812140 | None:intergenic | 25.0% |
| ! | ATATATATCTAAAAGGCAGA+AGG | - | chr8_4:1812122-1812141 | None:intergenic | 25.0% |
| ! | GTTGGACATATATATCTAAA+AGG | - | chr8_4:1812129-1812148 | None:intergenic | 25.0% |
| ! | ACTTATCAGTTTAAGCTAAT+GGG | + | chr8_4:1812164-1812183 | Msa1306870:intron | 25.0% |
| ! | TTGGTTTCTCAAATAATTCT+CGG | + | chr8_4:1812240-1812259 | Msa1306870:intron | 25.0% |
| ! | AAAAGAGGATAGAAAATGAA+GGG | - | chr8_4:1812276-1812295 | None:intergenic | 25.0% |
| !! | TCATTGAAGTTTAGGTTTAA+AGG | + | chr8_4:1812303-1812322 | Msa1306870:intron | 25.0% |
| ! | TGTAATACATATTCACAAAG+AGG | - | chr8_4:1812607-1812626 | None:intergenic | 25.0% |
| ! | GAAATGAAAACATTGAGATA+AGG | - | chr8_4:1812701-1812720 | None:intergenic | 25.0% |
| ! | CAGAAAAAATAACTAGTTGA+TGG | - | chr8_4:1812811-1812830 | None:intergenic | 25.0% |
| !!! | TTGAATATACTGGTTTTTCT+TGG | + | chr8_4:1812866-1812885 | Msa1306870:intron | 25.0% |
| !!! | TGAATATACTGGTTTTTCTT+GGG | + | chr8_4:1812867-1812886 | Msa1306870:intron | 25.0% |
| ! | TCACTAAGATTAATACACTA+CGG | + | chr8_4:1812909-1812928 | Msa1306870:intron | 25.0% |
| ! | TATGAATGAAGTGTATAGTT+TGG | + | chr8_4:1813065-1813084 | Msa1306870:intron | 25.0% |
| !! | AAAGTACTTATATTTAGGGA+CGG | - | chr8_4:1813107-1813126 | None:intergenic | 25.0% |
| !! | GGTCAAAGTACTTATATTTA+GGG | - | chr8_4:1813111-1813130 | None:intergenic | 25.0% |
| !! | TGGTCAAAGTACTTATATTT+AGG | - | chr8_4:1813112-1813131 | None:intergenic | 25.0% |
| !! | TTTTCTTAATTCTCGTGAAT+TGG | - | chr8_4:1813132-1813151 | None:intergenic | 25.0% |
| ! | TCACGAGAATTAAGAAAATT+AGG | + | chr8_4:1813134-1813153 | Msa1306870:intron | 25.0% |
| !! | TCTCGAGTTTTTAAATAATC+AGG | + | chr8_4:1813245-1813264 | Msa1306870:intron | 25.0% |
| !! | CTCGAGTTTTTAAATAATCA+GGG | + | chr8_4:1813246-1813265 | Msa1306870:intron | 25.0% |
| ! | GTATATCTAGTAACTTGAAA+AGG | + | chr8_4:1813289-1813308 | Msa1306870:intron | 25.0% |
| ! | ATATCTAGTAACTTGAAAAG+GGG | + | chr8_4:1813291-1813310 | Msa1306870:intron | 25.0% |
| ! | TTGAAAAGGGGTTTATAAAA+TGG | + | chr8_4:1813303-1813322 | Msa1306870:intron | 25.0% |
| ! | TGAAAAGGGGTTTATAAAAT+GGG | + | chr8_4:1813304-1813323 | Msa1306870:intron | 25.0% |
| ! | TCCAAAAAAAGCTTATATTG+AGG | + | chr8_4:1813341-1813360 | Msa1306870:intron | 25.0% |
| ! | CCAAAAAAAGCTTATATTGA+GGG | + | chr8_4:1813342-1813361 | Msa1306870:intron | 25.0% |
| !!! | ATTTTGGGATGTGATATTTT+GGG | + | chr8_4:1813433-1813452 | Msa1306870:intron | 25.0% |
| ! | ATTATCATATTATGGCATGT+TGG | - | chr8_4:1813486-1813505 | None:intergenic | 25.0% |
| ! | ATTCTCTCGTTCATTAATTA+TGG | + | chr8_4:1813679-1813698 | Msa1306870:intron | 25.0% |
| ! | CATGTAAATATCCTTTCAAA+AGG | + | chr8_4:1814519-1814538 | Msa1306870:three_prime_UTR | 25.0% |
| !! | GGCATTGAAGAATTAAATTT+AGG | + | chr8_4:1814585-1814604 | Msa1306870:three_prime_UTR | 25.0% |
| ! | TATTATGCTGCAAATCAAAA+TGG | + | chr8_4:1814722-1814741 | Msa1306870:three_prime_UTR | 25.0% |
| ! | GTAAATTGTTGATTGAGGAA+TGG | - | chr8_4:1808915-1808934 | None:intergenic | 30.0% |
| TTAACGTTACGTAACGTTAA+AGG | - | chr8_4:1808968-1808987 | None:intergenic | 30.0% | |
| !!! | TTTGGTGTTTTTGCTGAAAA+GGG | - | chr8_4:1809063-1809082 | None:intergenic | 30.0% |
| AATGTATGGTTAGGGTTAAA+GGG | - | chr8_4:1809104-1809123 | None:intergenic | 30.0% | |
| AACCCTAGTTAATCAATGTA+TGG | - | chr8_4:1809118-1809137 | None:intergenic | 30.0% | |
| !!! | TTGATTTGGCTAGTGATTTT+AGG | + | chr8_4:1809245-1809264 | Msa1306870:CDS | 30.0% |
| !!! | TTTTAGGTTAAGGTTTGCAA+AGG | + | chr8_4:1809261-1809280 | Msa1306870:CDS | 30.0% |
| ! | TTTAGGTTAAGGTTTGCAAA+GGG | + | chr8_4:1809262-1809281 | Msa1306870:CDS | 30.0% |
| GTGGTAATAGTAAAAGTAAG+AGG | + | chr8_4:1809296-1809315 | Msa1306870:CDS | 30.0% | |
| TGCTTGATGAACAAAATAAG+AGG | + | chr8_4:1809326-1809345 | Msa1306870:CDS | 30.0% | |
| GCTTGATGAACAAAATAAGA+GGG | + | chr8_4:1809327-1809346 | Msa1306870:CDS | 30.0% | |
| !! | TACTGTAATCAAAGGTGTTT+CGG | + | chr8_4:1809378-1809397 | Msa1306870:CDS | 30.0% |
| !! | AGAATATTCGGTGTGATAAA+GGG | + | chr8_4:1809401-1809420 | Msa1306870:CDS | 30.0% |
| TGATGTACTTGAATTCAATC+AGG | + | chr8_4:1809444-1809463 | Msa1306870:CDS | 30.0% | |
| !! | ATTGATTGCTGTTTGTATTG+CGG | + | chr8_4:1809575-1809594 | Msa1306870:intron | 30.0% |
| TTCAAACGTGTCTAATGAAA+TGG | - | chr8_4:1809811-1809830 | None:intergenic | 30.0% | |
| AATCAAAAATCAGCAGTACA+AGG | + | chr8_4:1810045-1810064 | Msa1306870:CDS | 30.0% | |
| ! | AATGCTCTTTTTGATATGAG+CGG | + | chr8_4:1810090-1810109 | Msa1306870:CDS | 30.0% |
| TCAAGAGGAAGTAAAGAAAT+CGG | + | chr8_4:1810212-1810231 | Msa1306870:CDS | 30.0% | |
| TTCAATGTCAAGAGAAGTAA+TGG | - | chr8_4:1810360-1810379 | None:intergenic | 30.0% | |
| AATACTAAATCTTGTAGGGA+TGG | - | chr8_4:1810435-1810454 | None:intergenic | 30.0% | |
| CACTTACAAATCATTCTAAC+GGG | - | chr8_4:1810602-1810621 | None:intergenic | 30.0% | |
| ATGCGAATATTTCTCATTGT+GGG | - | chr8_4:1811080-1811099 | None:intergenic | 30.0% | |
| AATGCGAATATTTCTCATTG+TGG | - | chr8_4:1811081-1811100 | None:intergenic | 30.0% | |
| ATACATTATGTTCGCAAACT+AGG | - | chr8_4:1811121-1811140 | None:intergenic | 30.0% | |
| TATTGCTTTATCTTGGAACA+GGG | + | chr8_4:1811138-1811157 | Msa1306870:intron | 30.0% | |
| !!! | TTTTGGAGCAAATAATAGTG+AGG | - | chr8_4:1811164-1811183 | None:intergenic | 30.0% |
| ACTATTATTTGCTCCAAAAG+AGG | + | chr8_4:1811165-1811184 | Msa1306870:CDS | 30.0% | |
| TAATAAACCTAAACTGGGTA+TGG | - | chr8_4:1811384-1811403 | None:intergenic | 30.0% | |
| TAAGCTCCAAAATATGAACT+AGG | + | chr8_4:1811433-1811452 | Msa1306870:intron | 30.0% | |
| AAGCTCCAAAATATGAACTA+GGG | + | chr8_4:1811434-1811453 | Msa1306870:intron | 30.0% | |
| ! | CACGTGAATCAAAAGTTTTT+CGG | - | chr8_4:1811707-1811726 | None:intergenic | 30.0% |
| CACTTATCAGTTTAAGCTAA+TGG | + | chr8_4:1812163-1812182 | Msa1306870:intron | 30.0% | |
| ATTCTTGATCACTTAGTTGA+GGG | - | chr8_4:1812218-1812237 | None:intergenic | 30.0% | |
| AATTCTTGATCACTTAGTTG+AGG | - | chr8_4:1812219-1812238 | None:intergenic | 30.0% | |
| ACTAAGTGATCAAGAATTGT+TGG | + | chr8_4:1812221-1812240 | Msa1306870:intron | 30.0% | |
| GAAAAGAGGATAGAAAATGA+AGG | - | chr8_4:1812277-1812296 | None:intergenic | 30.0% | |
| TGATAAAAACATGCAACTGT+AGG | - | chr8_4:1812380-1812399 | None:intergenic | 30.0% | |
| ATATATGTGTTTGTGACTTG+TGG | + | chr8_4:1812629-1812648 | Msa1306870:intron | 30.0% | |
| TTCAACGTGTGATGATAAAA+GGG | - | chr8_4:1812851-1812870 | None:intergenic | 30.0% | |
| ATTCAACGTGTGATGATAAA+AGG | - | chr8_4:1812852-1812871 | None:intergenic | 30.0% | |
| ! | TAATTTGTCACCAATGTGTA+TGG | + | chr8_4:1813177-1813196 | Msa1306870:intron | 30.0% |
| !!! | CCCTCAATATAAGCTTTTTT+TGG | - | chr8_4:1813345-1813364 | None:intergenic | 30.0% |
| AAAAAGCTTATATTGAGGGA+CGG | + | chr8_4:1813346-1813365 | Msa1306870:intron | 30.0% | |
| !!! | GATTTTGGGATGTGATATTT+TGG | + | chr8_4:1813432-1813451 | Msa1306870:intron | 30.0% |
| AATATACAGAATGAGCTTCT+TGG | - | chr8_4:1813533-1813552 | None:intergenic | 30.0% | |
| TAATTGTACTATACGGAAGT+CGG | + | chr8_4:1814090-1814109 | Msa1306870:CDS | 30.0% | |
| AGTTTGCATTGTTGGATTAT+TGG | + | chr8_4:1814404-1814423 | Msa1306870:CDS | 30.0% | |
| AGTACAGTATACAAAATGAG+TGG | + | chr8_4:1814550-1814569 | Msa1306870:three_prime_UTR | 30.0% | |
| ACTAAAATATCTCCAGAACT+AGG | - | chr8_4:1814618-1814637 | None:intergenic | 30.0% | |
| !!! | TTCTGGAGATATTTTAGTGT+TGG | + | chr8_4:1814620-1814639 | Msa1306870:three_prime_UTR | 30.0% |
| !!! | TCTGGAGATATTTTAGTGTT+GGG | + | chr8_4:1814621-1814640 | Msa1306870:three_prime_UTR | 30.0% |
| AGTGAAGAAGATACTGGAAA+TGG | - | chr8_4:1808877-1808896 | None:intergenic | 35.0% | |
| TTGAGGAATGGAAGATAAGA+GGG | - | chr8_4:1808903-1808922 | None:intergenic | 35.0% | |
| ATTGAGGAATGGAAGATAAG+AGG | - | chr8_4:1808904-1808923 | None:intergenic | 35.0% | |
| GAAGGTGGTGAATATTAGAT+CGG | - | chr8_4:1808992-1809011 | None:intergenic | 35.0% | |
| GAAATCGAAATGAAAGTTCG+AGG | - | chr8_4:1809014-1809033 | None:intergenic | 35.0% | |
| GAAAAGGGTAACATAAACTG+CGG | - | chr8_4:1809048-1809067 | None:intergenic | 35.0% | |
| !!! | CTTTGGTGTTTTTGCTGAAA+AGG | - | chr8_4:1809064-1809083 | None:intergenic | 35.0% |
| TCAACGAAAGGAGTTAACTT+TGG | - | chr8_4:1809081-1809100 | None:intergenic | 35.0% | |
| CAATGTATGGTTAGGGTTAA+AGG | - | chr8_4:1809105-1809124 | None:intergenic | 35.0% | |
| !!! | TTCATTTTTGAGTATGGAGG+TGG | + | chr8_4:1809177-1809196 | Msa1306870:exon | 35.0% |
| CATTGGAATCTTTGGGTAAA+GGG | + | chr8_4:1809221-1809240 | Msa1306870:CDS | 35.0% | |
| TTTGGGTAAAGGGTTTGATT+TGG | + | chr8_4:1809231-1809250 | Msa1306870:CDS | 35.0% | |
| !!! | TGGCTAGTGATTTTAGGTTA+AGG | + | chr8_4:1809251-1809270 | Msa1306870:CDS | 35.0% |
| !!! | AAGAGGGATATTTTGATTCC+TGG | + | chr8_4:1809343-1809362 | Msa1306870:CDS | 35.0% |
| ! | AAGGTGTTTCGGAGAATATT+CGG | + | chr8_4:1809389-1809408 | Msa1306870:CDS | 35.0% |
| !! | GAGAATATTCGGTGTGATAA+AGG | + | chr8_4:1809400-1809419 | Msa1306870:CDS | 35.0% |
| !! | GAATATTCGGTGTGATAAAG+GGG | + | chr8_4:1809402-1809421 | Msa1306870:CDS | 35.0% |
| GTTAATGCAGTTCACACATT+TGG | + | chr8_4:1809708-1809727 | Msa1306870:intron | 35.0% | |
| GTACAAGGAAAAATTCCTTC+TGG | + | chr8_4:1810060-1810079 | Msa1306870:CDS | 35.0% | |
| ! | AGAGCATTAAAATAGCCAGA+AGG | - | chr8_4:1810078-1810097 | None:intergenic | 35.0% |
| ! | TTTTTGATATGAGCGGTGAT+TGG | + | chr8_4:1810097-1810116 | Msa1306870:CDS | 35.0% |
| AGCAAGATATTTGATGTCAG+CGG | - | chr8_4:1810133-1810152 | None:intergenic | 35.0% | |
| TGTCTAGGTAAACAAACACT+AGG | + | chr8_4:1810262-1810281 | Msa1306870:intron | 35.0% | |
| ATTCTACATCAGGAAAACAC+AGG | - | chr8_4:1810321-1810340 | None:intergenic | 35.0% | |
| GAGACATGTTATTCTACATC+AGG | - | chr8_4:1810331-1810350 | None:intergenic | 35.0% | |
| ! | TCAAGAGAAGTAATGGAATG+CGG | - | chr8_4:1810353-1810372 | None:intergenic | 35.0% |
| GAAGCACACAAGCAAAAAAA+AGG | - | chr8_4:1810401-1810420 | None:intergenic | 35.0% | |
| AACTTAAAAGTCTGTCCACA+AGG | - | chr8_4:1810531-1810550 | None:intergenic | 35.0% | |
| AGCATAGTAACTGAAGTTTC+CGG | + | chr8_4:1810629-1810648 | Msa1306870:intron | 35.0% | |
| ! | TGATGCTGATTGAGTTTGTT+AGG | + | chr8_4:1810687-1810706 | Msa1306870:intron | 35.0% |
| GATGCAATCTCTCTATATGT+AGG | + | chr8_4:1810972-1810991 | Msa1306870:intron | 35.0% | |
| TGAAATACTGGTAAACTGTG+TGG | - | chr8_4:1811034-1811053 | None:intergenic | 35.0% | |
| !! | GCTAGATGTTTCTGAAATAC+TGG | - | chr8_4:1811046-1811065 | None:intergenic | 35.0% |
| GTATTGCTTTATCTTGGAAC+AGG | + | chr8_4:1811137-1811156 | Msa1306870:intron | 35.0% | |
| ATTATTTGCTCCAAAAGAGG+AGG | + | chr8_4:1811168-1811187 | Msa1306870:CDS | 35.0% | |
| AACTTGAATATGATCGCTTC+AGG | - | chr8_4:1811246-1811265 | None:intergenic | 35.0% | |
| CATTTATCCATACCCAGTTT+AGG | + | chr8_4:1811374-1811393 | Msa1306870:intron | 35.0% | |
| ! | CTGTTCCCTAGTTCATATTT+TGG | - | chr8_4:1811442-1811461 | None:intergenic | 35.0% |
| CAAAATATGAACTAGGGAAC+AGG | + | chr8_4:1811440-1811459 | Msa1306870:intron | 35.0% | |
| TATTGTAAATCTTCGGGAGA+TGG | - | chr8_4:1811745-1811764 | None:intergenic | 35.0% | |
| AGTTTCAAATTCCAAGGCAA+TGG | + | chr8_4:1811773-1811792 | Msa1306870:CDS | 35.0% | |
| GTTTCAAATTCCAAGGCAAT+GGG | + | chr8_4:1811774-1811793 | Msa1306870:CDS | 35.0% | |
| GTAGAGCTAATATGAAGCTT+TGG | - | chr8_4:1811880-1811899 | None:intergenic | 35.0% | |
| TTAGCTAAACTCTCCTGTTT+GGG | + | chr8_4:1811910-1811929 | Msa1306870:intron | 35.0% | |
| ! | TTCAATGAGTTGAGGAAAAG+AGG | - | chr8_4:1812291-1812310 | None:intergenic | 35.0% |
| TCCTCAACTCATTGAAGTTT+AGG | + | chr8_4:1812295-1812314 | Msa1306870:intron | 35.0% | |
| ACCTAAACTTCAATGAGTTG+AGG | - | chr8_4:1812299-1812318 | None:intergenic | 35.0% | |
| CGTGAATACAAAACTCAAGA+TGG | + | chr8_4:1812543-1812562 | Msa1306870:intron | 35.0% | |
| ! | GTGTTTGCTACGAACAATAA+TGG | - | chr8_4:1812727-1812746 | None:intergenic | 35.0% |
| TCAACGTGTGATGATAAAAG+GGG | - | chr8_4:1812850-1812869 | None:intergenic | 35.0% | |
| TCATCACACGTTGAATATAC+TGG | + | chr8_4:1812856-1812875 | Msa1306870:intron | 35.0% | |
| ATGTGCTGCATAACTTTGTA+GGG | + | chr8_4:1813578-1813597 | Msa1306870:intron | 35.0% | |
| !! | GCACGACCTTTCATTTTTAT+AGG | + | chr8_4:1813648-1813667 | Msa1306870:intron | 35.0% |
| ! | GGTATTTTGTACAAAATGGC+AGG | + | chr8_4:1813700-1813719 | Msa1306870:intron | 35.0% |
| ! | ATTTTGTACAAAATGGCAGG+TGG | + | chr8_4:1813703-1813722 | Msa1306870:intron | 35.0% |
| AACTCTGGCATTTATCCTAA+CGG | + | chr8_4:1814235-1814254 | Msa1306870:CDS | 35.0% | |
| ! | GTTGGATTATTGGTGATTCT+AGG | + | chr8_4:1814414-1814433 | Msa1306870:exon | 35.0% |
| GCAACACTAAATGATAACCA+CGG | - | chr8_4:1814470-1814489 | None:intergenic | 35.0% | |
| ! | ACTGTACAAAGCCTTTTGAA+AGG | - | chr8_4:1814533-1814552 | None:intergenic | 35.0% |
| TTAGGATATACTCCTAGTTC+TGG | + | chr8_4:1814603-1814622 | Msa1306870:three_prime_UTR | 35.0% | |
| AAAGGGCGAATTGTAATGAT+AGG | + | chr8_4:1814689-1814708 | Msa1306870:three_prime_UTR | 35.0% | |
| AAATGAAAGTTCGAGGAAGG+TGG | - | chr8_4:1809007-1809026 | None:intergenic | 40.0% | |
| TCGAAATGAAAGTTCGAGGA+AGG | - | chr8_4:1809010-1809029 | None:intergenic | 40.0% | |
| ! | AGAGTGGCATTGGAATCTTT+GGG | + | chr8_4:1809214-1809233 | Msa1306870:CDS | 40.0% |
| GCATTGGAATCTTTGGGTAA+AGG | + | chr8_4:1809220-1809239 | Msa1306870:CDS | 40.0% | |
| !!! | GATATTTTGATTCCTGGAGC+TGG | + | chr8_4:1809349-1809368 | Msa1306870:CDS | 40.0% |
| GTGATAAAGGGGATCGAATT+CGG | + | chr8_4:1809413-1809432 | Msa1306870:CDS | 40.0% | |
| ACTTCCTCTTGAAGTACAAG+CGG | - | chr8_4:1810204-1810223 | None:intergenic | 40.0% | |
| GTTTACCTAGACAATGAAGC+TGG | - | chr8_4:1810255-1810274 | None:intergenic | 40.0% | |
| TTCTTCTTACTTTCGGCACA+AGG | + | chr8_4:1810496-1810515 | Msa1306870:intron | 40.0% | |
| ACAAGGCTCAAATTACCTTG+TGG | + | chr8_4:1810513-1810532 | Msa1306870:intron | 40.0% | |
| CTATGTGAGTACCATATGTC+TGG | - | chr8_4:1810722-1810741 | None:intergenic | 40.0% | |
| GACATATGGTACTCACATAG+TGG | + | chr8_4:1810722-1810741 | Msa1306870:CDS | 40.0% | |
| TATGGTACTCACATAGTGGT+AGG | + | chr8_4:1810726-1810745 | Msa1306870:CDS | 40.0% | |
| CATTCATCAAAGATTCCTCC+CGG | + | chr8_4:1810792-1810811 | Msa1306870:CDS | 40.0% | |
| TCTTCCTCTGTAGTGAAGAA+GGG | - | chr8_4:1810875-1810894 | None:intergenic | 40.0% | |
| TTCTTCACTACAGAGGAAGA+CGG | + | chr8_4:1810875-1810894 | Msa1306870:CDS | 40.0% | |
| TGGTGTTTGATTGCATCACA+CGG | - | chr8_4:1811014-1811033 | None:intergenic | 40.0% | |
| TCAAGCACAGTCACTCAAAT+TGG | + | chr8_4:1811199-1811218 | Msa1306870:CDS | 40.0% | |
| !! | GCTTCATATTAGCTCTACAG+AGG | + | chr8_4:1811882-1811901 | Msa1306870:CDS | 40.0% |
| GTTAGCTAAACTCTCCTGTT+TGG | + | chr8_4:1811909-1811928 | Msa1306870:intron | 40.0% | |
| GAATGCTTGTTTACCCAAAC+AGG | - | chr8_4:1811926-1811945 | None:intergenic | 40.0% | |
| GTACAGTACAGTTCAACACA+TGG | - | chr8_4:1811954-1811973 | None:intergenic | 40.0% | |
| ! | AGATTTTCTCCGCGTATGTA+TGG | + | chr8_4:1812040-1812059 | Msa1306870:intron | 40.0% |
| GATAAGTGACGACGCAAAAA+TGG | - | chr8_4:1812151-1812170 | None:intergenic | 40.0% | |
| !! | AGTTTTGTATTCACGCATGC+AGG | - | chr8_4:1812538-1812557 | None:intergenic | 40.0% |
| !! | ATAACTAGTTGATGGGTCGT+AGG | - | chr8_4:1812803-1812822 | None:intergenic | 40.0% |
| !! | TAAGCTTGTCTTTCTGGTTC+AGG | - | chr8_4:1812945-1812964 | None:intergenic | 40.0% |
| GAACCAGAAAGACAAGCTTA+AGG | + | chr8_4:1812945-1812964 | Msa1306870:intron | 40.0% | |
| TCAGCTATGGTACTTTGACT+AGG | - | chr8_4:1813011-1813030 | None:intergenic | 40.0% | |
| GTACTTATATTTAGGGACGG+AGG | - | chr8_4:1813104-1813123 | None:intergenic | 40.0% | |
| TTTGCTACGTCCATACACAT+TGG | - | chr8_4:1813190-1813209 | None:intergenic | 40.0% | |
| TATGGACGTAGCAAAATTGC+TGG | + | chr8_4:1813195-1813214 | Msa1306870:intron | 40.0% | |
| ATGGACGTAGCAAAATTGCT+GGG | + | chr8_4:1813196-1813215 | Msa1306870:intron | 40.0% | |
| TGTAAGTTTCTGATTGCCTC+TGG | + | chr8_4:1813408-1813427 | Msa1306870:intron | 40.0% | |
| ! | TGATTGCCTCTGGTGATTTT+GGG | + | chr8_4:1813418-1813437 | Msa1306870:intron | 40.0% |
| CATGTGCTGCATAACTTTGT+AGG | + | chr8_4:1813577-1813596 | Msa1306870:intron | 40.0% | |
| AGCAGATAAAAGAAGAGTGG+AGG | - | chr8_4:1813626-1813645 | None:intergenic | 40.0% | |
| CCAAGCAGATAAAAGAAGAG+TGG | - | chr8_4:1813629-1813648 | None:intergenic | 40.0% | |
| ! | CCACTCTTCTTTTATCTGCT+TGG | + | chr8_4:1813626-1813645 | Msa1306870:intron | 40.0% |
| !! | TGGTTCTAGGAATTGGTTAC+TGG | - | chr8_4:1813903-1813922 | None:intergenic | 40.0% |
| !! | ATCTGACTGGTTCTAGGAAT+TGG | - | chr8_4:1813910-1813929 | None:intergenic | 40.0% |
| AATTCCTAGAACCAGTCAGA+TGG | + | chr8_4:1813909-1813928 | Msa1306870:CDS | 40.0% | |
| CGCAATCATTCAACCAGTTA+GGG | - | chr8_4:1813976-1813995 | None:intergenic | 40.0% | |
| CCTAACTGGTTGAATGATTG+CGG | + | chr8_4:1813974-1813993 | Msa1306870:CDS | 40.0% | |
| !! | GGAGGTGTTTACATTGTAAC+TGG | + | chr8_4:1813995-1814014 | Msa1306870:CDS | 40.0% |
| ! | GATGATTTTCTTGAAGCCTC+TGG | - | chr8_4:1814130-1814149 | None:intergenic | 40.0% |
| ACTCTGGCATTTATCCTAAC+GGG | + | chr8_4:1814236-1814255 | Msa1306870:CDS | 40.0% | |
| GCAGGTAAAGTTTGCATTGT+TGG | + | chr8_4:1814396-1814415 | Msa1306870:CDS | 40.0% | |
| ! | GGATTATTGGTGATTCTAGG+TGG | + | chr8_4:1814417-1814436 | Msa1306870:exon | 40.0% |
| CTGCAAATCAAAATGGATCC+AGG | + | chr8_4:1814729-1814748 | Msa1306870:three_prime_UTR | 40.0% | |
| ATTATCATAGCTATGCTGCC+TGG | - | chr8_4:1814750-1814769 | None:intergenic | 40.0% | |
| GGGTGAAGTGAAGAAGATAC+TGG | - | chr8_4:1808883-1808902 | None:intergenic | 45.0% | |
| AGGGTTAAAGGGTCAACGAA+AGG | - | chr8_4:1809093-1809112 | None:intergenic | 45.0% | |
| TTTGAGTATGGAGGTGGAAG+AGG | + | chr8_4:1809183-1809202 | Msa1306870:exon | 45.0% | |
| TTGAGTATGGAGGTGGAAGA+GGG | + | chr8_4:1809184-1809203 | Msa1306870:exon | 45.0% | |
| ! | GAGAGTGGCATTGGAATCTT+TGG | + | chr8_4:1809213-1809232 | Msa1306870:CDS | 45.0% |
| AGGTTTGCAAAGGGAATTCG+TGG | + | chr8_4:1809271-1809290 | Msa1306870:CDS | 45.0% | |
| GGTTTGCAAAGGGAATTCGT+GGG | + | chr8_4:1809272-1809291 | Msa1306870:CDS | 45.0% | |
| !!! | ATTTTGATTCCTGGAGCTGG+TGG | + | chr8_4:1809352-1809371 | Msa1306870:CDS | 45.0% |
| GGTGGAGCTACTGTAATCAA+AGG | + | chr8_4:1809370-1809389 | Msa1306870:CDS | 45.0% | |
| TTCTCCGCTTGTACTTCAAG+AGG | + | chr8_4:1810197-1810216 | Msa1306870:CDS | 45.0% | |
| !! | GCTGATTGAGTTTGTTAGGC+AGG | + | chr8_4:1810691-1810710 | Msa1306870:intron | 45.0% |
| TACTCACATAGTGGTAGGCA+TGG | + | chr8_4:1810731-1810750 | Msa1306870:CDS | 45.0% | |
| TAAATGCCTCCTGACATCAC+CGG | - | chr8_4:1810814-1810833 | None:intergenic | 45.0% | |
| !! | TGATGTCAGGAGGCATTTAG+AGG | + | chr8_4:1810815-1810834 | Msa1306870:CDS | 45.0% |
| !! | AGGAGGCATTTAGAGGATCT+TGG | + | chr8_4:1810822-1810841 | Msa1306870:CDS | 45.0% |
| GTCTTCCTCTGTAGTGAAGA+AGG | - | chr8_4:1810876-1810895 | None:intergenic | 45.0% | |
| GACGGCAGATAGCAAACATA+AGG | + | chr8_4:1810893-1810912 | Msa1306870:CDS | 45.0% | |
| TCTCTATATGTAGGTCCCAG+AGG | + | chr8_4:1810981-1811000 | Msa1306870:intron | 45.0% | |
| TCACACGGTTAAAGACCTCT+GGG | - | chr8_4:1810999-1811018 | None:intergenic | 45.0% | |
| ATCACACGGTTAAAGACCTC+TGG | - | chr8_4:1811000-1811019 | None:intergenic | 45.0% | |
| ! | GAACACATCTCCTCCTCTTT+TGG | - | chr8_4:1811181-1811200 | None:intergenic | 45.0% |
| ATGATCGCTTCAGGATTCGA+AGG | - | chr8_4:1811237-1811256 | None:intergenic | 45.0% | |
| TGACTAAGATAGCCACTTCC+AGG | - | chr8_4:1811300-1811319 | None:intergenic | 45.0% | |
| CTGTGCAAGAAGTGATTGCT+TGG | - | chr8_4:1811653-1811672 | None:intergenic | 45.0% | |
| AGAGGCAGTTCGCAAAACAT+GGG | - | chr8_4:1811802-1811821 | None:intergenic | 45.0% | |
| GAATTGCAGTGAAAGGGAAG+AGG | - | chr8_4:1811845-1811864 | None:intergenic | 45.0% | |
| GCAGCAGAATTGCAGTGAAA+GGG | - | chr8_4:1811851-1811870 | None:intergenic | 45.0% | |
| AGCAGCAGAATTGCAGTGAA+AGG | - | chr8_4:1811852-1811871 | None:intergenic | 45.0% | |
| TTCACTGCAATTCTGCTGCT+TGG | + | chr8_4:1811852-1811871 | Msa1306870:CDS | 45.0% | |
| ! | TCACTGCAATTCTGCTGCTT+GGG | + | chr8_4:1811853-1811872 | Msa1306870:CDS | 45.0% |
| TTTCTCCGCGTATGTATGGT+TGG | + | chr8_4:1812044-1812063 | Msa1306870:intron | 45.0% | |
| TATCGCCAACCATACATACG+CGG | - | chr8_4:1812052-1812071 | None:intergenic | 45.0% | |
| TGTATGGTTGGCGATATAGC+TGG | + | chr8_4:1812056-1812075 | Msa1306870:intron | 45.0% | |
| GTATGGTTGGCGATATAGCT+GGG | + | chr8_4:1812057-1812076 | Msa1306870:intron | 45.0% | |
| TATGGTTGGCGATATAGCTG+GGG | + | chr8_4:1812058-1812077 | Msa1306870:intron | 45.0% | |
| AGTGACGACGCAAAAATGGT+TGG | - | chr8_4:1812147-1812166 | None:intergenic | 45.0% | |
| GTGCCTTAAGCTTGTCTTTC+TGG | - | chr8_4:1812951-1812970 | None:intergenic | 45.0% | |
| GAAAGACAAGCTTAAGGCAC+CGG | + | chr8_4:1812951-1812970 | Msa1306870:intron | 45.0% | |
| TGTGTGCCTCAACCAATAAG+AGG | + | chr8_4:1812977-1812996 | Msa1306870:intron | 45.0% | |
| ! | CTAGCACCTCTTATTGGTTG+AGG | - | chr8_4:1812986-1813005 | None:intergenic | 45.0% |
| TAGGCACTAGCACCTCTTAT+TGG | - | chr8_4:1812992-1813011 | None:intergenic | 45.0% | |
| TACGGTAGATCATGTGCTTC+TGG | + | chr8_4:1813379-1813398 | Msa1306870:intron | 45.0% | |
| ! | CTGATTGCCTCTGGTGATTT+TGG | + | chr8_4:1813417-1813436 | Msa1306870:intron | 45.0% |
| TCACATCCCAAAATCACCAG+AGG | - | chr8_4:1813427-1813446 | None:intergenic | 45.0% | |
| ! | GCTTCTTGGCTCTTAGATGT+TGG | - | chr8_4:1813519-1813538 | None:intergenic | 45.0% |
| GGTGGTAAGTGAACAGAAAC+CGG | + | chr8_4:1813721-1813740 | Msa1306870:intron | 45.0% | |
| ! | AGAGGATCATCTTGTTTGGG+AGG | - | chr8_4:1813820-1813839 | None:intergenic | 45.0% |
| CCACATAGATTGTATGCTCG+GGG | - | chr8_4:1813858-1813877 | None:intergenic | 45.0% | |
| GCCACATAGATTGTATGCTC+GGG | - | chr8_4:1813859-1813878 | None:intergenic | 45.0% | |
| CGCCACATAGATTGTATGCT+CGG | - | chr8_4:1813860-1813879 | None:intergenic | 45.0% | |
| AGCATACAATCTATGTGGCG+AGG | + | chr8_4:1813860-1813879 | Msa1306870:CDS | 45.0% | |
| ! | TCTTCCATCTGACTGGTTCT+AGG | - | chr8_4:1813916-1813935 | None:intergenic | 45.0% |
| GAGAATCTCTTCCATCTGAC+TGG | - | chr8_4:1813923-1813942 | None:intergenic | 45.0% | |
| CCGCAATCATTCAACCAGTT+AGG | - | chr8_4:1813977-1813996 | None:intergenic | 45.0% | |
| AACTGGTTGAATGATTGCGG+AGG | + | chr8_4:1813977-1813996 | Msa1306870:CDS | 45.0% | |
| GTGCACAGCTCATTATCAGA+GGG | + | chr8_4:1814017-1814036 | Msa1306870:CDS | 45.0% | |
| AGCTCATTATCAGAGGGAGT+TGG | + | chr8_4:1814023-1814042 | Msa1306870:CDS | 45.0% | |
| !!! | CGCAGATGAAGCACGTTTTT+TGG | - | chr8_4:1814049-1814068 | None:intergenic | 45.0% |
| TACTATACGGAAGTCGGAGT+GGG | + | chr8_4:1814096-1814115 | Msa1306870:CDS | 45.0% | |
| ! | TTTTCTTGAAGCCTCTGGTG+CGG | - | chr8_4:1814125-1814144 | None:intergenic | 45.0% |
| ATGCCAGAGTTAAGTGCAGT+TGG | - | chr8_4:1814226-1814245 | None:intergenic | 45.0% | |
| AGTAGTTTACTCGAGCGAAC+AGG | - | chr8_4:1814271-1814290 | None:intergenic | 45.0% | |
| TAAATACGTCGAGACAGCTG+AGG | + | chr8_4:1814291-1814310 | Msa1306870:CDS | 45.0% | |
| TAGCAGCTGTAACCAACCAA+TGG | - | chr8_4:1814345-1814364 | None:intergenic | 45.0% | |
| CTGAAGTGATAAGATCACCG+TGG | + | chr8_4:1814450-1814469 | Msa1306870:three_prime_UTR | 45.0% | |
| AATGAGTGGCTGTTGACATG+AGG | + | chr8_4:1814564-1814583 | Msa1306870:three_prime_UTR | 45.0% | |
| !! | TTATTATTATTATCATATTA+TGG | - | chr8_4:1813494-1813513 | None:intergenic | 5.0% |
| !! | GGAAGAGGGTATTGAGAGAG+TGG | + | chr8_4:1809198-1809217 | Msa1306870:CDS | 50.0% |
| !! | GGGTATTGAGAGAGTGGCAT+TGG | + | chr8_4:1809204-1809223 | Msa1306870:CDS | 50.0% |
| CAGCAACTCAGACATCTGCA+AGG | - | chr8_4:1810025-1810044 | None:intergenic | 50.0% | |
| ATTTGATGTCAGCGGCGTCA+CGG | - | chr8_4:1810125-1810144 | None:intergenic | 50.0% | |
| ! | AGAAATCGGTTCCAGCTCAG+TGG | + | chr8_4:1810226-1810245 | Msa1306870:CDS | 50.0% |
| ! | GAAATCGGTTCCAGCTCAGT+GGG | + | chr8_4:1810227-1810246 | Msa1306870:CDS | 50.0% |
| GGGATCCAGCTTCATTGTCT+AGG | + | chr8_4:1810247-1810266 | Msa1306870:CDS | 50.0% | |
| GGCAGGTTCATCCAGACATA+TGG | + | chr8_4:1810708-1810727 | Msa1306870:intron | 50.0% | |
| ATAGTGGTAGGCATGGCTGT+TGG | + | chr8_4:1810738-1810757 | Msa1306870:CDS | 50.0% | |
| AAATGCCTCCTGACATCACC+GGG | - | chr8_4:1810813-1810832 | None:intergenic | 50.0% | |
| GAAGCCCTTCTTCACTACAG+AGG | + | chr8_4:1810868-1810887 | Msa1306870:CDS | 50.0% | |
| CCAGTCAGAAGCGAGGAAAT+CGG | - | chr8_4:1811273-1811292 | None:intergenic | 50.0% | |
| AGGAATTCCAGTCAGAAGCG+AGG | - | chr8_4:1811280-1811299 | None:intergenic | 50.0% | |
| TCGCTTCTGACTGGAATTCC+TGG | + | chr8_4:1811279-1811298 | Msa1306870:CDS | 50.0% | |
| CTGACTGGAATTCCTGGAAG+TGG | + | chr8_4:1811285-1811304 | Msa1306870:CDS | 50.0% | |
| GAGAGGCAGTTCGCAAAACA+TGG | - | chr8_4:1811803-1811822 | None:intergenic | 50.0% | |
| ! | TGTTTTGCGAACTGCCTCTC+AGG | + | chr8_4:1811803-1811822 | Msa1306870:CDS | 50.0% |
| ATGGTTGGCGATATAGCTGG+GGG | + | chr8_4:1812059-1812078 | Msa1306870:intron | 50.0% | |
| TTGGTTGAGGCACACACATC+CGG | - | chr8_4:1812973-1812992 | None:intergenic | 50.0% | |
| AGTACCATAGCTGAAGCCGT+TGG | + | chr8_4:1813017-1813036 | Msa1306870:intron | 50.0% | |
| AGGGACGGAGTCGTGATTTA+CGG | + | chr8_4:1813361-1813380 | Msa1306870:intron | 50.0% | |
| GGTAAGTGAACAGAAACCGG+TGG | + | chr8_4:1813724-1813743 | Msa1306870:CDS | 50.0% | |
| AGTGAACAGAAACCGGTGGT+TGG | + | chr8_4:1813728-1813747 | Msa1306870:CDS | 50.0% | |
| !!! | TGTCACTTTTCTTGCCCTCC+AGG | - | chr8_4:1813766-1813785 | None:intergenic | 50.0% |
| CCCCGAGCATACAATCTATG+TGG | + | chr8_4:1813855-1813874 | Msa1306870:CDS | 50.0% | |
| TCGTCAAGCATGACCCTAAC+TGG | + | chr8_4:1813960-1813979 | Msa1306870:CDS | 50.0% | |
| GGTGCACAGCTCATTATCAG+AGG | + | chr8_4:1814016-1814035 | Msa1306870:CDS | 50.0% | |
| GTACTATACGGAAGTCGGAG+TGG | + | chr8_4:1814095-1814114 | Msa1306870:CDS | 50.0% | |
| ACTATACGGAAGTCGGAGTG+GGG | + | chr8_4:1814097-1814116 | Msa1306870:CDS | 50.0% | |
| GCTCCAACTGCACTTAACTC+TGG | + | chr8_4:1814220-1814239 | Msa1306870:CDS | 50.0% | |
| ! | GAGACAGCTGAGGTTTTACG+TGG | + | chr8_4:1814301-1814320 | Msa1306870:CDS | 50.0% |
| !! | AATGGCCAGGAGCATCATGA+GGG | - | chr8_4:1814327-1814346 | None:intergenic | 50.0% |
| AGCTGCTAAGCTTGTCACTG+AGG | + | chr8_4:1814357-1814376 | Msa1306870:CDS | 50.0% | |
| GCTGCTAAGCTTGTCACTGA+GGG | + | chr8_4:1814358-1814377 | Msa1306870:CDS | 50.0% | |
| GTCACTGAGGGTGGTAAGAT+AGG | + | chr8_4:1814370-1814389 | Msa1306870:CDS | 50.0% | |
| GGGTGGTAAGATAGGATTGC+AGG | + | chr8_4:1814378-1814397 | Msa1306870:CDS | 50.0% | |
| GCAAAGGGAATTCGTGGGAG+TGG | + | chr8_4:1809277-1809296 | Msa1306870:CDS | 55.0% | |
| AGATTCCTCCCGGTGATGTC+AGG | + | chr8_4:1810802-1810821 | Msa1306870:CDS | 55.0% | |
| CCGATTTCCTCGCTTCTGAC+TGG | + | chr8_4:1811270-1811289 | Msa1306870:CDS | 55.0% | |
| AACTGCCTCTCAGGCATCAG+CGG | + | chr8_4:1811812-1811831 | Msa1306870:CDS | 55.0% | |
| TTTCTCCGCTGATGCCTGAG+AGG | - | chr8_4:1811820-1811839 | None:intergenic | 55.0% | |
| TACAAGCGAAGGCCAACCAC+CGG | - | chr8_4:1813743-1813762 | None:intergenic | 55.0% | |
| AGTGCAGTTGGAGCCTGCTT+TGG | - | chr8_4:1814214-1814233 | None:intergenic | 55.0% | |
| TTACTCGAGCGAACAGGCAC+AGG | - | chr8_4:1814265-1814284 | None:intergenic | 55.0% | |
| !! | CAATGGCCAGGAGCATCATG+AGG | - | chr8_4:1814328-1814347 | None:intergenic | 55.0% |
| CTCATGATGCTCCTGGCCAT+TGG | + | chr8_4:1814326-1814345 | Msa1306870:CDS | 55.0% | |
| TGATGCTCCTGGCCATTGGT+TGG | + | chr8_4:1814330-1814349 | Msa1306870:CDS | 55.0% | |
| GCTGTAACCAACCAATGGCC+AGG | - | chr8_4:1814340-1814359 | None:intergenic | 55.0% | |
| GCTAAGCTTGTCACTGAGGG+TGG | + | chr8_4:1814361-1814380 | Msa1306870:CDS | 55.0% | |
| ACAGTAGCTCCACCAGCTCC+AGG | - | chr8_4:1809364-1809383 | None:intergenic | 60.0% | |
| GAAGCTGGATCCCACTGAGC+TGG | - | chr8_4:1810240-1810259 | None:intergenic | 60.0% | |
| GTGGTAGGCATGGCTGTTGG+AGG | + | chr8_4:1810741-1810760 | Msa1306870:CDS | 60.0% | |
| TTCCTCCCGGTGATGTCAGG+AGG | + | chr8_4:1810805-1810824 | Msa1306870:CDS | 60.0% | |
| AACATGGGCGCCCATTGCCT+TGG | - | chr8_4:1811787-1811806 | None:intergenic | 60.0% | |
| GCAGCCAACGGCTTCAGCTA+TGG | - | chr8_4:1813024-1813043 | None:intergenic | 60.0% | |
| GCCACGTCTAACGCAGCCAA+CGG | - | chr8_4:1813036-1813055 | None:intergenic | 60.0% | |
| !! | GGTTGGCCTTCGCTTGTACC+TGG | + | chr8_4:1813745-1813764 | Msa1306870:CDS | 60.0% |
| TGGCCTTCGCTTGTACCTGG+AGG | + | chr8_4:1813748-1813767 | Msa1306870:CDS | 60.0% | |
| GGCCTTCGCTTGTACCTGGA+GGG | + | chr8_4:1813749-1813768 | Msa1306870:CDS | 60.0% | |
| TGCCCTCCAGGTACAAGCGA+AGG | - | chr8_4:1813754-1813773 | None:intergenic | 60.0% | |
| TGCTGCTGCTCCACCAAAGC+AGG | + | chr8_4:1814198-1814217 | Msa1306870:CDS | 60.0% | |
| GCAGTTGGAGCCTGCTTTGG+TGG | - | chr8_4:1814211-1814230 | None:intergenic | 60.0% | |
| TGCCTCCTGACATCACCGGG+AGG | - | chr8_4:1810810-1810829 | None:intergenic | 65.0% | |
| ! | GCCGTTGGCTGCGTTAGACG+TGG | + | chr8_4:1813032-1813051 | Msa1306870:intron | 65.0% |
| ACAGGCACAGGTGGCCCGTT+AGG | - | chr8_4:1814253-1814272 | None:intergenic | 65.0% | |
| CTCGAGCGAACAGGCACAGG+TGG | - | chr8_4:1814262-1814281 | None:intergenic | 65.0% | |
| CGTGGCCCTCATGATGCTCC+TGG | + | chr8_4:1814319-1814338 | Msa1306870:CDS | 65.0% | |
| !!! | GGAGTGGGGCGCCGCACCAG+AGG | + | chr8_4:1814111-1814130 | Msa1306870:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 1808842 | 1814793 | 1808842 | ID=Msa1306870;Name=Msa1306870 |
| chr8_4 | mRNA | 1808842 | 1814793 | 1808842 | ID=Msa1306870-mRNA-1;Parent=Msa1306870;Name=Msa1306870-mRNA-1;_AED=0.07;_eAED=0.07;_QI=348|1|1|1|1|1|7|364|617 |
| chr8_4 | exon | 1808842 | 1809465 | 1808842 | ID=Msa1306870-mRNA-1:exon:573;Parent=Msa1306870-mRNA-1 |
| chr8_4 | exon | 1810030 | 1810268 | 1810030 | ID=Msa1306870-mRNA-1:exon:574;Parent=Msa1306870-mRNA-1 |
| chr8_4 | exon | 1810713 | 1810914 | 1810713 | ID=Msa1306870-mRNA-1:exon:575;Parent=Msa1306870-mRNA-1 |
| chr8_4 | exon | 1810994 | 1811071 | 1810994 | ID=Msa1306870-mRNA-1:exon:576;Parent=Msa1306870-mRNA-1 |
| chr8_4 | exon | 1811159 | 1811342 | 1811159 | ID=Msa1306870-mRNA-1:exon:577;Parent=Msa1306870-mRNA-1 |
| chr8_4 | exon | 1811737 | 1811903 | 1811737 | ID=Msa1306870-mRNA-1:exon:578;Parent=Msa1306870-mRNA-1 |
| chr8_4 | exon | 1813722 | 1814793 | 1813722 | ID=Msa1306870-mRNA-1:exon:579;Parent=Msa1306870-mRNA-1 |
| chr8_4 | five_prime_UTR | 1808842 | 1809189 | 1808842 | ID=Msa1306870-mRNA-1:five_prime_utr;Parent=Msa1306870-mRNA-1 |
| chr8_4 | CDS | 1809190 | 1809465 | 1809190 | ID=Msa1306870-mRNA-1:cds;Parent=Msa1306870-mRNA-1 |
| chr8_4 | CDS | 1810030 | 1810268 | 1810030 | ID=Msa1306870-mRNA-1:cds;Parent=Msa1306870-mRNA-1 |
| chr8_4 | CDS | 1810713 | 1810914 | 1810713 | ID=Msa1306870-mRNA-1:cds;Parent=Msa1306870-mRNA-1 |
| chr8_4 | CDS | 1810994 | 1811071 | 1810994 | ID=Msa1306870-mRNA-1:cds;Parent=Msa1306870-mRNA-1 |
| chr8_4 | CDS | 1811159 | 1811342 | 1811159 | ID=Msa1306870-mRNA-1:cds;Parent=Msa1306870-mRNA-1 |
| chr8_4 | CDS | 1811737 | 1811903 | 1811737 | ID=Msa1306870-mRNA-1:cds;Parent=Msa1306870-mRNA-1 |
| chr8_4 | CDS | 1813722 | 1814429 | 1813722 | ID=Msa1306870-mRNA-1:cds;Parent=Msa1306870-mRNA-1 |
| chr8_4 | three_prime_UTR | 1814430 | 1814793 | 1814430 | ID=Msa1306870-mRNA-1:three_prime_utr;Parent=Msa1306870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
