AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0622040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0622040 MtrunA17_Chr7g0272441 89.937 318 14 1 1 300 1 318 0.0 584
Msa0622040 MtrunA17_Chr7g0272441 78.056 319 33 2 318 599 1 319 4.65e-179 508
Msa0622040 MtrunA17_Chr7g0272431 84.591 318 31 1 1 300 1 318 0.0 557
Msa0622040 MtrunA17_Chr7g0272431 86.520 319 6 2 318 599 1 319 0.0 557
Msa0622040 MtrunA17_Chr7g0272451 83.019 318 33 2 1 300 1 315 0.0 539
Msa0622040 MtrunA17_Chr7g0272451 79.624 319 25 3 318 599 1 316 4.36e-180 511
Msa0622040 MtrunA17_Chr7g0272481 73.585 318 66 1 1 300 1 318 2.36e-169 484
Msa0622040 MtrunA17_Chr7g0272481 70.533 319 57 2 318 599 1 319 3.07e-160 461
Msa0622040 MtrunA17_Chr7g0272531 73.125 320 64 3 1 300 31 348 1.05e-166 478
Msa0622040 MtrunA17_Chr7g0272531 69.605 329 59 4 310 599 23 349 3.12e-160 462
Msa0622040 MtrunA17_Chr7g0272501 72.013 318 71 1 1 300 1 318 1.56e-166 477
Msa0622040 MtrunA17_Chr7g0272501 68.966 319 62 2 318 599 1 319 7.06e-157 452
Msa0622040 MtrunA17_Chr7g0272181 72.013 318 71 1 1 300 1 318 2.11e-165 474
Msa0622040 MtrunA17_Chr7g0272181 68.652 319 63 2 318 599 1 319 2.08e-155 448
Msa0622040 MtrunA17_Chr7g0272171 71.698 318 72 1 1 300 1 318 3.17e-164 471
Msa0622040 MtrunA17_Chr7g0272171 68.966 319 62 2 318 599 1 319 2.98e-155 448
Msa0622040 MtrunA17_Chr4g0000111 62.346 324 95 6 1 300 1 321 9.67e-140 409
Msa0622040 MtrunA17_Chr4g0000111 61.610 323 82 5 318 599 1 322 2.05e-134 395
Msa0622040 MtrunA17_Chr4g0067581 59.375 320 108 3 1 300 37 354 8.98e-132 389
Msa0622040 MtrunA17_Chr4g0067581 54.627 335 109 6 304 599 25 355 2.37e-118 355
Msa0622040 MtrunA17_Chr7g0269471 58.307 319 111 4 1 300 1 316 9.24e-125 370
Msa0622040 MtrunA17_Chr7g0269471 55.280 322 99 5 318 599 1 317 2.06e-119 356
Msa0622040 MtrunA17_Chr8g0372491 45.652 322 145 6 1 300 3 316 1.13e-91 285
Msa0622040 MtrunA17_Chr8g0372491 42.415 323 137 7 318 599 3 317 2.62e-83 263
Msa0622040 MtrunA17_Chr7g0272471 80.769 156 12 1 318 455 1 156 1.03e-85 264
Msa0622040 MtrunA17_Chr7g0272471 76.923 156 18 1 1 138 1 156 1.10e-82 256
Msa0622040 MtrunA17_Chr1g0192291 66.467 167 34 3 318 463 1 166 1.29e-70 225
Msa0622040 MtrunA17_Chr1g0192291 66.667 159 31 3 1 138 1 158 4.25e-68 218
Msa0622040 MtrunA17_Chr7g0272461 83.810 105 17 0 159 263 1 105 4.15e-56 186
Msa0622040 MtrunA17_Chr7g0272461 81.905 105 19 0 457 561 1 105 1.98e-54 181
Msa0622040 MtrunA17_Chr2g0324141 33.230 322 183 7 1 301 1 311 2.40e-51 179
Msa0622040 MtrunA17_Chr2g0324141 33.438 320 164 8 318 598 1 310 4.56e-48 170
Msa0622040 MtrunA17_Chr4g0047701 33.645 321 180 7 1 300 1 309 4.72e-51 178
Msa0622040 MtrunA17_Chr4g0047701 34.177 316 166 7 318 598 1 309 1.85e-47 168
Msa0622040 MtrunA17_Chr2g0324161 33.540 322 182 8 1 301 1 311 3.24e-50 176
Msa0622040 MtrunA17_Chr2g0324161 32.198 323 164 9 318 598 1 310 1.36e-46 166
Msa0622040 MtrunA17_Chr4g0047681 33.333 321 181 7 1 300 1 309 4.69e-50 176
Msa0622040 MtrunA17_Chr4g0047681 33.438 320 163 8 318 598 1 309 7.93e-46 164
Msa0622040 MtrunA17_Chr3g0086531 81.690 71 13 0 381 451 3 73 1.79e-36 131
Msa0622040 MtrunA17_Chr3g0086531 83.636 55 9 0 80 134 19 73 6.59e-28 107
Msa0622040 MtrunA17_Chr7g0272391 41.026 117 45 4 143 257 1 95 6.44e-17 77.0
Msa0622040 MtrunA17_Chr7g0272391 43.269 104 35 3 454 555 14 95 1.66e-15 73.2
Msa0622040 MtrunA17_Chr7g0272511 72.500 40 11 0 258 297 27 66 2.57e-14 68.2
Msa0622040 MtrunA17_Chr7g0272511 70.000 40 12 0 556 595 27 66 6.62e-14 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0622040 AT3G05600.1 59.877 324 105 4 1 300 1 323 3.78e-138 405
Msa0622040 AT3G05600.1 58.154 325 92 6 318 599 1 324 2.70e-129 382
Msa0622040 AT4G02340.1 56.113 319 117 4 1 300 1 315 2.31e-125 372
Msa0622040 AT4G02340.1 53.106 322 105 5 318 599 1 316 4.95e-117 351
Msa0622040 AT4G15960.1 50.926 324 134 3 1 300 51 373 4.90e-114 345
Msa0622040 AT4G15960.1 49.695 328 121 5 315 599 48 374 2.10e-106 325
Msa0622040 AT2G26740.1 57.632 321 111 4 4 300 1 320 4.44e-113 341
Msa0622040 AT2G26740.1 51.863 322 111 6 321 599 1 321 2.02e-97 300
Msa0622040 AT2G26750.1 55.660 318 117 4 4 298 1 317 5.08e-109 330
Msa0622040 AT2G26750.1 49.844 321 118 6 321 599 1 320 1.84e-92 288
Msa0622040 AT3G05600.2 61.066 244 70 4 1 220 1 243 2.38e-100 305
Msa0622040 AT3G05600.2 58.197 244 58 6 318 518 1 243 6.89e-91 281
Msa0622040 AT4G15955.3 49.221 321 109 5 5 297 6 300 7.25e-97 298
Msa0622040 AT4G15955.3 49.186 307 119 5 322 599 6 304 2.89e-95 294
Msa0622040 AT3G51000.1 47.170 318 143 7 4 300 5 318 2.84e-93 290
Msa0622040 AT3G51000.1 44.514 319 133 7 321 599 5 319 2.02e-84 267
Msa0622040 AT4G15955.2 55.491 173 49 2 5 149 6 178 1.13e-59 197
Msa0622040 AT4G15955.2 53.704 162 47 3 322 455 6 167 2.65e-52 177
Msa0622040 AT4G15955.1 53.179 173 53 2 5 149 6 178 7.78e-56 187
Msa0622040 AT4G15955.1 54.268 164 47 3 322 457 6 169 6.50e-54 182

Find 173 sgRNAs with CRISPR-Local

Find 628 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATAGGCTTTGATTCTTTC+AGG 0.119767 4_2:+74408665 None:intergenic
ACATAAGCTTTGATTCTTTC+AGG 0.126719 4_2:+74404949 None:intergenic
ATAACAACTTCCTCCAAATT+TGG 0.197478 4_2:+74400096 None:intergenic
CCATCAACAGGTTTCACTTT+TGG 0.201205 4_2:+74404895 None:intergenic
CAAGAAAGATGTGCCAAATT+TGG 0.205231 4_2:-74406827 Msa0622040:CDS
ATAACCACTTCCTCCAAATT+TGG 0.220764 4_2:+74406814 None:intergenic
CCATCAACAGGTTTCACTTT+TGG 0.231114 4_2:+74408611 None:intergenic
ATGAGATAATATGCCTTCTT+TGG 0.231977 4_2:+74407687 None:intergenic
TGATATCCTCAGCAGCTTCT+TGG 0.242215 4_2:+74400046 None:intergenic
TAAGAAAGATGTGCCAAATT+TGG 0.247220 4_2:-74400109 Msa0622040:CDS
GATTTAGTTTACACTTCTTT+TGG 0.261386 4_2:-74406880 Msa0622040:CDS
CGCCACCAGATTGCTGCTCT+TGG 0.265149 4_2:-74408887 Msa0622040:CDS
TCTTCCTCGTTGCTCATGAC+TGG 0.287745 4_2:-74405008 Msa0622040:CDS
GTGACAGGAACCCGGGAAAA+TGG 0.290473 4_2:-74407791 Msa0622040:intron
GTACAATGCCCCTCCCTTCC+TGG 0.297800 4_2:-74407651 Msa0622040:CDS
TACTCATGATTCTTCTATTA+CGG 0.303020 4_2:-74399840 Msa0622040:three_prime_UTR
AACATGAAATTCCTTTGTTA+TGG 0.307628 4_2:-74399758 None:intergenic
CTTCCTTGTAGCTCATGATT+GGG 0.316992 4_2:-74408723 Msa0622040:intron
GTACTTGAAGCATGTGGATT+AGG 0.317120 4_2:+74400885 None:intergenic
CACAGAACAGTGGAAGTAAA+TGG 0.329659 4_2:-74405279 Msa0622040:CDS
TGATTTCCTCGGCAGCTTCT+CGG 0.332479 4_2:+74406764 None:intergenic
TGAGATTTCTATAGTAGTTA+AGG 0.334286 4_2:+74400781 None:intergenic
GTACAAAGGCCCTCCCTTCT+TGG 0.334892 4_2:-74400866 Msa0622040:CDS
TTCCTGAACTTTGGTACTCT+TGG 0.363293 4_2:-74405194 Msa0622040:CDS
TTAGGTATCACGCCTTCTTT+TGG 0.366228 4_2:+74400903 None:intergenic
GAAGATTGTGTAACTACTAA+TGG 0.366861 4_2:+74408799 None:intergenic
TCTTCCTTGTAGCTCATGAT+TGG 0.373039 4_2:-74408724 Msa0622040:intron
TTACTATATCTGCAGATTCC+AGG 0.380361 4_2:-74404848 Msa0622040:intron
CGCCAAGAGTACCAAAGTTC+AGG 0.381681 4_2:+74405192 None:intergenic
CGCCAAGAGTACCAGAGTTC+AGG 0.381681 4_2:+74408908 None:intergenic
ACTTAACTCCTAGTGATTAG+TGG 0.384188 4_2:+74399967 None:intergenic
GATGCAGTTTACACTTCATT+TGG 0.385195 4_2:-74400162 Msa0622040:CDS
CCAAAAGTGAAACCTGTTGA+TGG 0.389532 4_2:-74408611 Msa0622040:CDS
TCGCCGTAACCACGGAGATC+TGG 0.394426 4_2:+74408839 None:intergenic
TTTGAAAAGACAGGATTTAG+TGG 0.395852 4_2:-74407592 Msa0622040:CDS
ATGCCTTCTTTGGGCAGGAT+TGG 0.397843 4_2:+74407697 None:intergenic
ATGCTTACAAGTAGGAATTC+TGG 0.400743 4_2:-74400939 Msa0622040:CDS
CATGACTGGGGTGCCATGAT+TGG 0.400934 4_2:-74404994 Msa0622040:CDS
CGCCACCAGATTGCGGCTCT+CGG 0.403229 4_2:-74405171 Msa0622040:CDS
TTTGGAGGAAGTTGTTATAC+AGG 0.404163 4_2:-74400091 Msa0622040:CDS
GAGATTTCTATAGTAGTTAA+GGG 0.405115 4_2:+74400782 None:intergenic
TTTGGATTTCTGGGTAAATA+CGG 0.407798 4_2:+74408629 None:intergenic
CCTTCTTTGGGCAGGATTGG+TGG 0.408975 4_2:+74407700 None:intergenic
GATGGCATGCGAGCTTTGTT+TGG 0.411295 4_2:-74404877 Msa0622040:CDS
ACCGCTCTCGATGTATTGTT+TGG 0.413172 4_2:+74406855 None:intergenic
TTATTATATCTGCAGATTCC+AGG 0.414957 4_2:-74408564 Msa0622040:intron
TCACCGTATCCACGGAGATC+TGG 0.416951 4_2:+74405123 None:intergenic
TGCTTACAAGTAGGAATTCT+GGG 0.417680 4_2:-74400938 Msa0622040:CDS
CATAAGCTTTGATTCTTTCA+GGG 0.418162 4_2:+74404950 None:intergenic
GCTTCTAAATTTGAAAAGAC+AGG 0.421347 4_2:-74400816 Msa0622040:CDS
GCTTCCAAATTTGAAAAGAC+AGG 0.423519 4_2:-74407601 Msa0622040:CDS
CCTGTTGTCCTGTTCCTTCA+CGG 0.424309 4_2:-74405219 Msa0622040:CDS
CCTGTTGTCCTGTTCCTTCA+CGG 0.424309 4_2:-74408935 Msa0622040:CDS
GAGCTCACTGCAGCATGGAC+TGG 0.424418 4_2:-74400228 Msa0622040:CDS
CCAAAAGTGAAACCTGTTGA+TGG 0.426814 4_2:-74404895 Msa0622040:CDS
GAAGTTCATCATAGGTGATC+TGG 0.427789 4_2:-74406902 Msa0622040:CDS
TGAGATAATATGCCTTCTTT+GGG 0.432022 4_2:+74407688 None:intergenic
CATAGGCTTTGATTCTTTCA+GGG 0.432762 4_2:+74408666 None:intergenic
CTTCCTCGTTGCTCATGACT+GGG 0.434456 4_2:-74405007 Msa0622040:CDS
TTCCTGAACTCTGGTACTCT+TGG 0.435109 4_2:-74408910 Msa0622040:CDS
TTTGGGTTTCTGGGTAAATA+CGG 0.435366 4_2:+74404913 None:intergenic
CATGATTGGGGTGCCATCAT+TGG 0.436037 4_2:-74408710 Msa0622040:CDS
GACATCTTCTTGCGAGAGCC+AGG 0.445878 4_2:+74407633 None:intergenic
GCTCCAGATCTCCGTGGTTA+CGG 0.448429 4_2:-74408842 Msa0622040:CDS
TAGTTACACAATCTTCCATT+TGG 0.454984 4_2:-74408792 Msa0622040:CDS
ATGCTTACAAGTCGTAATCC+TGG 0.458065 4_2:-74407724 Msa0622040:CDS
GGGAGCCGAGAGCCGCAATC+TGG 0.460139 4_2:+74405166 None:intergenic
CAGGAAAGCCGTGAAGGAAC+AGG 0.460850 4_2:+74405211 None:intergenic
CAGGAAAGCCGTGAAGGAAC+AGG 0.460850 4_2:+74408927 None:intergenic
AAAGCTCGCATGCCATCAAC+AGG 0.462838 4_2:+74404883 None:intergenic
GGGAGCCAAGAGCAGCAATC+TGG 0.464162 4_2:+74408882 None:intergenic
TTCACGGCTTTCCTGAACTT+TGG 0.464362 4_2:-74405203 Msa0622040:CDS
ACAGCTCGCATTCCATCAAC+AGG 0.466950 4_2:+74408599 None:intergenic
CCACCAATCCTGCCCAAAGA+AGG 0.467921 4_2:-74407700 Msa0622040:CDS
TTATCATATATACAGAAATT+GGG 0.470961 4_2:-74400250 Msa0622040:intron
ATTGCTGCTCTTGGCTCCCT+CGG 0.472828 4_2:-74408878 Msa0622040:CDS
GAGCTCACGGCAGCATGGAC+CGG 0.477692 4_2:-74406946 Msa0622040:CDS
CCGTGAAGGAACAGGACAAC+AGG 0.481846 4_2:+74405219 None:intergenic
CCGTGAAGGAACAGGACAAC+AGG 0.481846 4_2:+74408935 None:intergenic
TTGGGCAGGATTGGTGGCCC+AGG 0.482553 4_2:+74407706 None:intergenic
GTACCAGTGAAGTTCATCAT+AGG 0.483596 4_2:-74406910 Msa0622040:CDS
AAAATGCATATTGCTGAGAA+AGG 0.485302 4_2:-74405252 Msa0622040:CDS
AAAATGCATATTGCAGAGAA+AGG 0.487741 4_2:-74408968 Msa0622040:CDS
CAACGATGTCACCCACCAAA+TGG 0.489958 4_2:+74408777 None:intergenic
TGCGAGAGCCAGGAAGGGAG+GGG 0.493557 4_2:+74407643 None:intergenic
GCTCCAGATCTCCGTGGATA+CGG 0.493914 4_2:-74405126 Msa0622040:intron
CATGAGCAACGAGGAAGACT+TGG 0.494085 4_2:+74405013 None:intergenic
ATTGCGGCTCTCGGCTCCCT+CGG 0.495545 4_2:-74405162 Msa0622040:CDS
GAAAGATGTGCCAAATTTGG+AGG 0.498854 4_2:-74400106 Msa0622040:CDS
TGTGCCAAATTTGGAGGAAG+TGG 0.500333 4_2:-74406818 Msa0622040:CDS
TTCACGGCTTTCCTGAACTC+TGG 0.502205 4_2:-74408919 Msa0622040:CDS
ATAATATGCCTTCTTTGGGC+AGG 0.504415 4_2:+74407692 None:intergenic
ATGGCCTTGATCAACAGTTC+TGG 0.508152 4_2:+74407745 None:intergenic
TGCTTACAAGTCGTAATCCT+GGG 0.514561 4_2:-74407723 Msa0622040:CDS
CAATCTATGTTATTCTCTTG+CGG 0.515580 4_2:-74399913 Msa0622040:three_prime_UTR
TCTTCTTGTGAGAGCCAAGA+AGG 0.520505 4_2:+74400852 None:intergenic
ACAAAGATACCAACCAATCA+TGG 0.521014 4_2:+74404981 None:intergenic
CAATCCATGTGACAGGAACC+CGG 0.522947 4_2:-74407799 Msa0622040:intron
GATGGAATGCGAGCTGTGTA+TGG 0.523423 4_2:-74408593 Msa0622040:CDS
TGGTACTTTAATTTGTGCTC+CGG 0.523809 4_2:+74406927 None:intergenic
TACACAATCTTCCATTTGGT+GGG 0.524970 4_2:-74408788 Msa0622040:intron
GAAAGATGTGCCAAATTTGG+AGG 0.528499 4_2:-74406824 Msa0622040:CDS
TTGCGAGAGCCAGGAAGGGA+GGG 0.531398 4_2:+74407642 None:intergenic
GTGTAACTACTAATGGAAGC+TGG 0.533389 4_2:+74408806 None:intergenic
ACAAAGATACCAACCAATGA+TGG 0.536291 4_2:+74408697 None:intergenic
GCCTTTGTACTTGAAGCATG+TGG 0.538003 4_2:+74400879 None:intergenic
TTCCTTGTAGCTCATGATTG+GGG 0.541290 4_2:-74408722 Msa0622040:intron
TTACACAATCTTCCATTTGG+TGG 0.541545 4_2:-74408789 Msa0622040:CDS
GGGCATTGTACTTGAAACAC+TGG 0.545502 4_2:+74407663 None:intergenic
AGCCGAGAGCCGCAATCTGG+TGG 0.547065 4_2:+74405169 None:intergenic
ATTGCTGAGAAAGGAAAAGA+AGG 0.548522 4_2:-74405243 Msa0622040:CDS
ATTGCAGAGAAAGGAAAAGA+AGG 0.548522 4_2:-74408959 Msa0622040:CDS
CTTGCGAGAGCCAGGAAGGG+AGG 0.550388 4_2:+74407641 None:intergenic
CCACCAATCCTACCAAAAGA+AGG 0.551242 4_2:-74400915 Msa0622040:CDS
GAGGAAGTGGTTATACAGAA+AGG 0.551271 4_2:-74406805 Msa0622040:CDS
AATCCATGTGACAGGAACCC+GGG 0.551511 4_2:-74407798 Msa0622040:intron
TCACCTATGATGAACTTCAC+TGG 0.553123 4_2:+74406907 None:intergenic
GAGGAAGTTGTTATACAGGA+AGG 0.556694 4_2:-74400087 Msa0622040:CDS
ATGGAAGCTGAAATTGCTAA+AGG 0.559276 4_2:-74407772 Msa0622040:CDS
TAGTCCAGAACTGTTGATCA+AGG 0.560762 4_2:-74407749 Msa0622040:CDS
TTGTGAGAGCCAAGAAGGGA+GGG 0.564283 4_2:+74400857 None:intergenic
CGGAACACTGAGACAAACAT+AGG 0.567344 4_2:+74408649 None:intergenic
CACAGAACAGTGGAAGTGAA+TGG 0.567993 4_2:-74408995 Msa0622040:CDS
ATTGGGGTGCCATCATTGGT+TGG 0.574625 4_2:-74408706 Msa0622040:CDS
ACTGGGGTGCCATGATTGGT+TGG 0.574896 4_2:-74404990 Msa0622040:CDS
TCAAGAACATGCTTACAAGT+AGG 0.581750 4_2:-74400947 Msa0622040:intron
AGCCAAGAGCAGCAATCTGG+TGG 0.583237 4_2:+74408885 None:intergenic
AATGTGATTACTGATTTCCT+CGG 0.590060 4_2:+74406753 None:intergenic
TCTTCTTGCGAGAGCCAGGA+AGG 0.593368 4_2:+74407637 None:intergenic
CTCTTGGCGCCACCAGATTG+CGG 0.594106 4_2:-74405178 Msa0622040:CDS
ACTAATGGAAGCTGGAGCAT+CGG 0.595210 4_2:+74408814 None:intergenic
CATCGGTGTCGCCGTAACCA+CGG 0.597704 4_2:+74408831 None:intergenic
ATTGGGAGCTCACTGCAGCA+TGG 0.599865 4_2:-74400233 Msa0622040:CDS
CAACAACCGAGAAGCTGCCG+AGG 0.602231 4_2:-74406770 Msa0622040:CDS
ATTGGGAGCTCACGGCAGCA+TGG 0.611461 4_2:-74406951 Msa0622040:CDS
GAAAAGACAGGATTTAGTGG+TGG 0.611798 4_2:-74407589 Msa0622040:CDS
ATTTCATGTTCATTAGAACA+AGG 0.612896 4_2:+74399771 None:intergenic
TAACAGAAATTGGGAGCTCA+CGG 0.614147 4_2:-74406959 Msa0622040:intron
CAACAACCAAGAAGCTGCTG+AGG 0.614308 4_2:-74400052 Msa0622040:CDS
CATCGGTGTCACCGTATCCA+CGG 0.616606 4_2:+74405115 None:intergenic
TGTTTGAGTTTGTGAAGTGA+AGG 0.619677 4_2:+74405342 None:intergenic
ACAAAGCAATACATCGAGAG+TGG 0.620658 4_2:-74400138 Msa0622040:CDS
AAAGTTCAGGAAAGCCGTGA+AGG 0.621297 4_2:+74405205 None:intergenic
TTTGAAAAGACAGGATTCAG+TGG 0.621795 4_2:-74400807 Msa0622040:CDS
CTTGTGAGAGCCAAGAAGGG+AGG 0.625664 4_2:+74400856 None:intergenic
ATTGCAAGCCACTAATCACT+AGG 0.625694 4_2:-74399975 Msa0622040:three_prime_UTR
AGCAACAGCACGGTAACCGA+GGG 0.627749 4_2:+74405146 None:intergenic
AGAGTTCAGGAAAGCCGTGA+AGG 0.628117 4_2:+74408921 None:intergenic
ATAGAAGAATCATGAGTACA+AGG 0.628488 4_2:+74399845 None:intergenic
AGGAGTAGAGCACAGAACAG+TGG 0.630212 4_2:-74405289 Msa0622040:CDS
GAGCAACAGCACGGTAACCG+AGG 0.630872 4_2:+74405145 None:intergenic
CTTCTTGTGAGAGCCAAGAA+GGG 0.631265 4_2:+74400853 None:intergenic
GTGCCAGTGACATTCATCAC+AGG 0.631366 4_2:-74400192 Msa0622040:CDS
AGGATTACGACTTGTAAGCA+TGG 0.633672 4_2:+74407726 None:intergenic
TCCACATGCTTCAAGTACAA+AGG 0.634635 4_2:-74400880 Msa0622040:CDS
AGTTGTTATACAGGAAGGTG+TGG 0.637871 4_2:-74400082 Msa0622040:CDS
TTCCTCGTTGCTCATGACTG+GGG 0.644782 4_2:-74405006 Msa0622040:CDS
GGCATTGTACTTGAAACACT+GGG 0.645498 4_2:+74407664 None:intergenic
AAAAGTAAAAGCCATAACAA+AGG 0.647790 4_2:+74399747 None:intergenic
CTTCTTGCGAGAGCCAGGAA+GGG 0.648277 4_2:+74407638 None:intergenic
TCACCTGTGATGAATGTCAC+TGG 0.650266 4_2:+74400189 None:intergenic
GAGCAACAGCACAGTAACCG+AGG 0.650868 4_2:+74408861 None:intergenic
GTTGCTCTCATCGACTCACT+CGG 0.658224 4_2:-74405042 Msa0622040:CDS
AAGCAATACATCGAGAGTGG+AGG 0.668681 4_2:-74400135 Msa0622040:CDS
AAACAATACATCGAGAGCGG+TGG 0.675908 4_2:-74406853 Msa0622040:CDS
AGGAATAGAACACAGAACAG+TGG 0.676997 4_2:-74409005 Msa0622040:CDS
GGAGATCTGGAGCAACAGCA+CGG 0.677123 4_2:+74405136 None:intergenic
AGCAACAGCACAGTAACCGA+GGG 0.678247 4_2:+74408862 None:intergenic
AGTGGTTATACAGAAAGGTG+TGG 0.683843 4_2:-74406800 Msa0622040:CDS
ACCAAACAATACATCGAGAG+CGG 0.693164 4_2:-74406856 Msa0622040:CDS
GCTGTTGCTCCAGATCTCCG+TGG 0.694215 4_2:-74405132 Msa0622040:CDS
GCTGTTGCTCCAGATCTCCG+TGG 0.735697 4_2:-74408848 Msa0622040:CDS
CACCCCAGTCATGAGCAACG+AGG 0.746246 4_2:+74405004 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATATCAATTCTTAAAA+TGG + chr4_2:74400635-74400654 None:intergenic 10.0%
!!! ACATAATTTTAAGATTTTAA+AGG + chr4_2:74402355-74402374 None:intergenic 10.0%
!! ATTAAGAGTAATTATATAAA+TGG + chr4_2:74403075-74403094 None:intergenic 10.0%
!!! TTAATATTCCTTTTTTTTAT+TGG - chr4_2:74403206-74403225 Msa0622040:intron 10.0%
!!! ATGGATTTTAAATTAATTAA+TGG - chr4_2:74403354-74403373 Msa0622040:intron 10.0%
!!! ATTATTAATTGATGTTTTAT+GGG + chr4_2:74406938-74406957 None:intergenic 10.0%
!!! AATTATTAATTGATGTTTTA+TGG + chr4_2:74406939-74406958 None:intergenic 10.0%
!! GATTATTAATAAAAAGAAAT+TGG - chr4_2:74407490-74407509 Msa0622040:intron 10.0%
!!! TTAGGATTTAATTTTATGTA+CGG + chr4_2:74400687-74400706 None:intergenic 15.0%
!! AATTAAATCCTAAATTCATT+TGG - chr4_2:74400694-74400713 Msa0622040:intron 15.0%
!!! TTTTGAACTTGATAAATAAA+TGG - chr4_2:74400741-74400760 Msa0622040:intron 15.0%
!! TAAATTGACCAATAAAAAAA+AGG + chr4_2:74403217-74403236 None:intergenic 15.0%
!! ACACTAAGTAATTTAATTAA+TGG - chr4_2:74403278-74403297 Msa0622040:intron 15.0%
!! AAAAAAAAAAAACCAAAAAG+AGG + chr4_2:74404162-74404181 None:intergenic 15.0%
!! AACAATATAATGGTTATAAT+TGG - chr4_2:74404263-74404282 Msa0622040:intron 15.0%
!!! AGTATATTGTTTGATTTTAA+TGG - chr4_2:74404305-74404324 Msa0622040:intron 15.0%
!!! GTATATTGTTTGATTTTAAT+GGG - chr4_2:74404306-74404325 Msa0622040:intron 15.0%
!!! TATATTGTTTGATTTTAATG+GGG - chr4_2:74404307-74404326 Msa0622040:intron 15.0%
!! AACAATATAATGGTTATAAT+TGG - chr4_2:74404263-74404282 Msa0622040:intron 15.0%
!!! AGTATATTGTTTGATTTTAA+TGG - chr4_2:74404305-74404324 Msa0622040:intron 15.0%
!!! GTATATTGTTTGATTTTAAT+GGG - chr4_2:74404306-74404325 Msa0622040:intron 15.0%
!!! TATATTGTTTGATTTTAATG+GGG - chr4_2:74404307-74404326 Msa0622040:intron 15.0%
!! TTGAAGTTTATATAATTGTT+GGG + chr4_2:74405540-74405559 None:intergenic 15.0%
!!! AGATAGATCAAAAATTTTAA+TGG + chr4_2:74405995-74406014 None:intergenic 15.0%
!! ATCATCTATTTCAAATAAAT+GGG + chr4_2:74406319-74406338 None:intergenic 15.0%
!! TATCATCTATTTCAAATAAA+TGG + chr4_2:74406320-74406339 None:intergenic 15.0%
!!! ATTTATTTGAAATAGATGAT+AGG - chr4_2:74406319-74406338 Msa0622040:intron 15.0%
!!! AGAATTTTTGAATATTTGTA+GGG + chr4_2:74406398-74406417 None:intergenic 15.0%
!!! TAGAATTTTTGAATATTTGT+AGG + chr4_2:74406399-74406418 None:intergenic 15.0%
!!! AAAATGTTAGATTTTTAACT+TGG - chr4_2:74407247-74407266 Msa0622040:intron 15.0%
!!! AAATTCCACAAATTTTTTAA+AGG + chr4_2:74407469-74407488 None:intergenic 15.0%
!! TTTATCATATATACAGAAAT+TGG - chr4_2:74408520-74408539 Msa0622040:intron 15.0%
!! TTATCATATATACAGAAATT+GGG - chr4_2:74408521-74408540 Msa0622040:intron 15.0%
!! TAATCAATAAGCTCAAATTA+CGG + chr4_2:74400439-74400458 None:intergenic 20.0%
!!! AGACATTTTAAGTTTTTCTT+TGG + chr4_2:74400496-74400515 None:intergenic 20.0%
!! ATGAGTTTAATCTAAACTTT+AGG - chr4_2:74400718-74400737 Msa0622040:intron 20.0%
!!! GTTATACACTAACTAAATTT+TGG + chr4_2:74400805-74400824 None:intergenic 20.0%
!! TATAAATTACAAGAGAATGA+TGG + chr4_2:74401293-74401312 None:intergenic 20.0%
!!! TTTTAAAATCAAGGATTAAG+AGG + chr4_2:74401493-74401512 None:intergenic 20.0%
!! TTATAATAATTGCTGAGATA+AGG - chr4_2:74401535-74401554 Msa0622040:intron 20.0%
!!! TTAACATAAAACAAAAGCAT+TGG + chr4_2:74401795-74401814 None:intergenic 20.0%
!!! TGTTTTATGTTAACAGAAAT+TGG - chr4_2:74401802-74401821 Msa0622040:intron 20.0%
!!! GTTTTATGTTAACAGAAATT+GGG - chr4_2:74401803-74401822 Msa0622040:intron 20.0%
!!! AATTTCTTATTTCTACTCAA+TGG - chr4_2:74402289-74402308 Msa0622040:intron 20.0%
!!! TATGTTTTGAAGAAAATTCA+TGG - chr4_2:74402370-74402389 Msa0622040:intron 20.0%
!! AAATAAACAAATCTATCAGA+TGG + chr4_2:74402885-74402904 None:intergenic 20.0%
!!! TTTTTTGAAGAAAGCTTTTA+GGG + chr4_2:74402935-74402954 None:intergenic 20.0%
!!! TTTTTTTGAAGAAAGCTTTT+AGG + chr4_2:74402936-74402955 None:intergenic 20.0%
!! ATATTTCATTTCTTGAGATT+GGG + chr4_2:74403244-74403263 None:intergenic 20.0%
!! AATATTTCATTTCTTGAGAT+TGG + chr4_2:74403245-74403264 None:intergenic 20.0%
!! CATTCAATCAAACAATATAA+TGG - chr4_2:74404253-74404272 Msa0622040:intron 20.0%
!! AAAAAAAAAAAAGAGGAAGA+GGG + chr4_2:74404377-74404396 None:intergenic 20.0%
!! AAAAAAAAAAAAAGAGGAAG+AGG + chr4_2:74404378-74404397 None:intergenic 20.0%
!! CATTCAATCAAACAATATAA+TGG - chr4_2:74404253-74404272 Msa0622040:intron 20.0%
!! CAATAAAAGAAATTCAAAAG+AGG - chr4_2:74405142-74405161 Msa0622040:CDS 20.0%
!! AGTAGTACAAAAATGAATTT+AGG + chr4_2:74405223-74405242 None:intergenic 20.0%
!! CTTGAAGTTTATATAATTGT+TGG + chr4_2:74405541-74405560 None:intergenic 20.0%
!! CAACAATTATATAAACTTCA+AGG - chr4_2:74405539-74405558 Msa0622040:intron 20.0%
!!! ATTTCAAATGTTTTTTTGAG+TGG + chr4_2:74405901-74405920 None:intergenic 20.0%
!! TCATCTATTTCAAATAAATG+GGG + chr4_2:74406318-74406337 None:intergenic 20.0%
!!! GAATTTTTGAATATTTGTAG+GGG + chr4_2:74406397-74406416 None:intergenic 20.0%
!! TAAAAGGTTAAATCGAAAAA+GGG + chr4_2:74406428-74406447 None:intergenic 20.0%
!! GTGAAAAATTAATGTGTAAA+AGG + chr4_2:74406444-74406463 None:intergenic 20.0%
!! TGAATGTTTCGAAAAAATTT+GGG + chr4_2:74406558-74406577 None:intergenic 20.0%
!! ATGAATGTTTCGAAAAAATT+TGG + chr4_2:74406559-74406578 None:intergenic 20.0%
!!! ATATCTTTCCAGTATATTTT+CGG + chr4_2:74406648-74406667 None:intergenic 20.0%
!!! AAAAAAATTTCATGCCTTTT+CGG - chr4_2:74406824-74406843 Msa0622040:CDS 20.0%
!! AAATGTGATATCAAAATTCA+AGG + chr4_2:74408358-74408377 None:intergenic 20.0%
!! TCTATTAACAAATACACATT+GGG + chr4_2:74408485-74408504 None:intergenic 20.0%
!! TTCTATTAACAAATACACAT+TGG + chr4_2:74408486-74408505 None:intergenic 20.0%
! AAAAATGAAAAATACGAACC+TGG + chr4_2:74400228-74400247 None:intergenic 25.0%
! GATTAATTCTACTTGAACTA+TGG - chr4_2:74400279-74400298 Msa0622040:intron 25.0%
!!! AAGTTTTAGTTTTTTGCTTG+TGG - chr4_2:74400331-74400350 Msa0622040:intron 25.0%
! CAAAAACCAAAAGATAAAGT+GGG + chr4_2:74400416-74400435 None:intergenic 25.0%
!! TGAGCTTATTGATTATAAAG+TGG - chr4_2:74400444-74400463 Msa0622040:intron 25.0%
! TGGTTCAACAAATATCTATA+TGG + chr4_2:74400615-74400634 None:intergenic 25.0%
! AACTCATACCAAATGAATTT+AGG + chr4_2:74400705-74400724 None:intergenic 25.0%
! ATTGGATTACAAATTTGACA+AGG + chr4_2:74400781-74400800 None:intergenic 25.0%
!!! CACTAACTAAATTTTGGTAT+TGG + chr4_2:74400799-74400818 None:intergenic 25.0%
!! AAATCCTGTCTTTTCAAATT+TGG + chr4_2:74401177-74401196 None:intergenic 25.0%
!! CATCTAGTTAATTTGGAAAA+AGG + chr4_2:74401262-74401281 None:intergenic 25.0%
! ATTTATACAAAACCAATCCA+AGG - chr4_2:74401306-74401325 Msa0622040:intron 25.0%
! TCTGACAATCTTAAATTTGA+TGG - chr4_2:74401709-74401728 Msa0622040:intron 25.0%
! ACAATCTTAAATTTGATGGA+AGG - chr4_2:74401713-74401732 Msa0622040:intron 25.0%
!!! GATTTAGTTTACACTTCTTT+TGG - chr4_2:74401891-74401910 Msa0622040:intron 25.0%
! CAAATTATTACCATGTGTTT+AGG - chr4_2:74402413-74402432 Msa0622040:intron 25.0%
! GTCAACATATATTAAAGTCA+TGG + chr4_2:74402478-74402497 None:intergenic 25.0%
! GAATCTGTTAAAAAATGACT+TGG - chr4_2:74402675-74402694 Msa0622040:intron 25.0%
! AAAAAAAAGAAGCAAGTGAA+AGG + chr4_2:74402781-74402800 None:intergenic 25.0%
!!! TTTTTGAAGAAAGCTTTTAG+GGG + chr4_2:74402934-74402953 None:intergenic 25.0%
!! GAAGAAATTATGAGCTTTTA+GGG + chr4_2:74402965-74402984 None:intergenic 25.0%
!! TAAATTTTCGAATGGAGTTA+CGG - chr4_2:74403041-74403060 Msa0622040:intron 25.0%
! GTTGCTAAAGTAAAGTAATA+TGG - chr4_2:74403335-74403354 Msa0622040:intron 25.0%
! AGAATATAAGAAAATGAACC+TGG + chr4_2:74403944-74403963 None:intergenic 25.0%
! TTACAGTTTAGACACTAATT+AGG - chr4_2:74404183-74404202 Msa0622040:intron 25.0%
! TACAGTTTAGACACTAATTA+GGG - chr4_2:74404184-74404203 Msa0622040:intron 25.0%
! TTACAGTTTAGACACTAATT+AGG - chr4_2:74404183-74404202 Msa0622040:intron 25.0%
! TACAGTTTAGACACTAATTA+GGG - chr4_2:74404184-74404203 Msa0622040:intron 25.0%
! GTGATAGAAATACCAATATT+AGG + chr4_2:74404781-74404800 None:intergenic 25.0%
! TATCATGTCAGATTCTATTA+AGG - chr4_2:74404819-74404838 Msa0622040:intron 25.0%
!! GTTTTTCATCGTAATAGATT+AGG - chr4_2:74404844-74404863 Msa0622040:intron 25.0%
!!! TTACACTTTTTTTTCCCATA+TGG - chr4_2:74404916-74404935 Msa0622040:CDS 25.0%
!!! TACACTTTTTTTTCCCATAT+GGG - chr4_2:74404917-74404936 Msa0622040:CDS 25.0%
! CATTAAAAAAAACTTCACCA+AGG + chr4_2:74404961-74404980 None:intergenic 25.0%
!!! TGGTGAAGTTTTTTTTAATG+AGG - chr4_2:74404961-74404980 Msa0622040:CDS 25.0%
!!! GTGTTTTTAACACTTGTTTT+AGG - chr4_2:74404988-74405007 Msa0622040:CDS 25.0%
! AAAGTTATGACATCTCAATT+AGG + chr4_2:74405108-74405127 None:intergenic 25.0%
! TGTTGAAATGGAGATAAAAT+TGG + chr4_2:74405177-74405196 None:intergenic 25.0%
!! AATTTTATCTCCATTTCAAC+AGG - chr4_2:74405176-74405195 Msa0622040:CDS 25.0%
!! ATTTTATCTCCATTTCAACA+GGG - chr4_2:74405177-74405196 Msa0622040:CDS 25.0%
! AGTACAAAAATGAATTTAGG+TGG + chr4_2:74405220-74405239 None:intergenic 25.0%
!!! GGTTGTTTTGCTTATAATAT+TGG + chr4_2:74405677-74405696 None:intergenic 25.0%
!! GATTACGAAACTAATTTTCT+TGG + chr4_2:74405698-74405717 None:intergenic 25.0%
! ATCAGTGTTACATTTAATTC+AGG - chr4_2:74405769-74405788 Msa0622040:intron 25.0%
! TCAGTGTTACATTTAATTCA+GGG - chr4_2:74405770-74405789 Msa0622040:intron 25.0%
! AAATGGTTCAATTGGTTAAA+AGG + chr4_2:74406021-74406040 None:intergenic 25.0%
! AGAACAAAAAATGGTTCAAT+TGG + chr4_2:74406029-74406048 None:intergenic 25.0%
! AGCAATAATTACAAGTAGTT+GGG + chr4_2:74406123-74406142 None:intergenic 25.0%
! AAGCAATAATTACAAGTAGT+TGG + chr4_2:74406124-74406143 None:intergenic 25.0%
!! AAACTAGAGAAATAGGATTT+TGG + chr4_2:74406150-74406169 None:intergenic 25.0%
!!! TTGTGTTTGTTTTCCAAAAA+TGG - chr4_2:74406181-74406200 Msa0622040:intron 25.0%
!! AAATTTCCCAAGTTTTTATC+CGG + chr4_2:74406345-74406364 None:intergenic 25.0%
! GTAAAAGGTTAAATCGAAAA+AGG + chr4_2:74406429-74406448 None:intergenic 25.0%
! ATGTGAATTAATGCTGAATT+GGG + chr4_2:74406484-74406503 None:intergenic 25.0%
!!! AATTCACATGATATTTTTGC+AGG - chr4_2:74406495-74406514 Msa0622040:intron 25.0%
! AAAAATTTGGGAAACGTTTA+TGG + chr4_2:74406546-74406565 None:intergenic 25.0%
!! CTTATTGTATATTTTCGGAA+AGG + chr4_2:74406622-74406641 None:intergenic 25.0%
! CTTTCCGAAAATATACAATA+AGG - chr4_2:74406620-74406639 Msa0622040:intron 25.0%
!! GGAACCTTATTGTATATTTT+CGG + chr4_2:74406627-74406646 None:intergenic 25.0%
! TCCTAAATCTTTATTGTTAC+CGG + chr4_2:74407007-74407026 None:intergenic 25.0%
! GAAAGAAAAATGAAATCAGA+AGG - chr4_2:74407039-74407058 Msa0622040:intron 25.0%
!! TGCAGTTTTCTTTTATACAA+AGG - chr4_2:74407111-74407130 Msa0622040:intron 25.0%
!! GCAGTTTTCTTTTATACAAA+GGG - chr4_2:74407112-74407131 Msa0622040:intron 25.0%
!! TATTCTCTGAATCAAGTTTT+TGG + chr4_2:74407204-74407223 None:intergenic 25.0%
!! AAGCATTTGCAAATTTTACA+AGG + chr4_2:74407299-74407318 None:intergenic 25.0%
!! TGTGTCCTTTAAAAAATTTG+TGG - chr4_2:74407461-74407480 Msa0622040:intron 25.0%
! GAGATTTCTATAGTAGTTAA+GGG + chr4_2:74407992-74408011 None:intergenic 25.0%
! TGAGATTTCTATAGTAGTTA+AGG + chr4_2:74407993-74408012 None:intergenic 25.0%
!!! GTCATTTTTCCAAATTAACT+AGG - chr4_2:74408026-74408045 Msa0622040:intron 25.0%
! AATTTAGTTAGTCAAGAAGA+GGG + chr4_2:74408130-74408149 None:intergenic 25.0%
!!! ACAATTTAAGTTAGGGTTTT+AGG + chr4_2:74408240-74408259 None:intergenic 25.0%
! TACTCATGATTCTTCTATTA+CGG - chr4_2:74408931-74408950 Msa0622040:CDS 25.0%
! ATTTCATGTTCATTAGAACA+AGG + chr4_2:74409003-74409022 None:intergenic 25.0%
AAAATGCATATTGCAGAGAA+AGG - chr4_2:74399803-74399822 Msa0622040:three_prime_UTR 30.0%
GAAGATTGTGTAACTACTAA+TGG + chr4_2:74399975-74399994 None:intergenic 30.0%
TAGTTACACAATCTTCCATT+TGG - chr4_2:74399979-74399998 Msa0622040:three_prime_UTR 30.0%
! TTTGGATTTCTGGGTAAATA+CGG + chr4_2:74400145-74400164 None:intergenic 30.0%
TTATTATATCTGCAGATTCC+AGG - chr4_2:74400207-74400226 Msa0622040:CDS 30.0%
!!! GTTTTTTGCTTGTGGTATAA+TGG - chr4_2:74400339-74400358 Msa0622040:intron 30.0%
! TATTCACCCACTTTATCTTT+TGG - chr4_2:74400407-74400426 Msa0622040:intron 30.0%
GCAAAAACCAAAAGATAAAG+TGG + chr4_2:74400417-74400436 None:intergenic 30.0%
CTTGATAAATAAATGGAGAC+TGG - chr4_2:74400748-74400767 Msa0622040:intron 30.0%
! TAAATAAGACTCTGAGAAGT+TGG - chr4_2:74400891-74400910 Msa0622040:CDS 30.0%
TGAGATAATATGCCTTCTTT+GGG + chr4_2:74401086-74401105 None:intergenic 30.0%
ATGAGATAATATGCCTTCTT+TGG + chr4_2:74401087-74401106 None:intergenic 30.0%
TTTGAAAAGACAGGATTTAG+TGG - chr4_2:74401179-74401198 Msa0622040:intron 30.0%
CAAGAGACATCTAGTTAATT+TGG + chr4_2:74401269-74401288 None:intergenic 30.0%
TTATATCATGAGTGATGTGT+AGG + chr4_2:74401595-74401614 None:intergenic 30.0%
! AGATTGTCAGATGATTTTGA+AGG + chr4_2:74401700-74401719 None:intergenic 30.0%
!! AATGTGATTACTGATTTCCT+CGG + chr4_2:74402021-74402040 None:intergenic 30.0%
! CAATCTATGCTTTTCTATTG+CGG - chr4_2:74402137-74402156 Msa0622040:intron 30.0%
TTCTGTAATAGCACAATCAA+GGG + chr4_2:74402211-74402230 None:intergenic 30.0%
TTTCTGTAATAGCACAATCA+AGG + chr4_2:74402212-74402231 None:intergenic 30.0%
ATTACAGAAACATTGTCCTT+TGG - chr4_2:74402222-74402241 Msa0622040:intron 30.0%
CAATTTCATTAGACATCCAA+AGG + chr4_2:74402241-74402260 None:intergenic 30.0%
ATTAAAGTCATGGAATCCAA+AGG + chr4_2:74402468-74402487 None:intergenic 30.0%
!!! ATTGTTTGACTTGTTTTTGC+TGG - chr4_2:74402534-74402553 Msa0622040:intron 30.0%
!!! TTGTTTGACTTGTTTTTGCT+GGG - chr4_2:74402535-74402554 Msa0622040:intron 30.0%
CATTTGAATTGTTGAGCATA+GGG + chr4_2:74402571-74402590 None:intergenic 30.0%
TCATTTGAATTGTTGAGCAT+AGG + chr4_2:74402572-74402591 None:intergenic 30.0%
ACAATTGAGACAACAAGAAA+CGG - chr4_2:74402604-74402623 Msa0622040:intron 30.0%
! AAACGGGTTTAGAATTGAAA+GGG - chr4_2:74402621-74402640 Msa0622040:intron 30.0%
! AATCTATCAGATGGAGATTT+TGG + chr4_2:74402876-74402895 None:intergenic 30.0%
! GGAAGAAATTATGAGCTTTT+AGG + chr4_2:74402966-74402985 None:intergenic 30.0%
GATGACTTTGATAAAAGGAA+AGG + chr4_2:74402996-74403015 None:intergenic 30.0%
GAATGGATGACTTTGATAAA+AGG + chr4_2:74403001-74403020 None:intergenic 30.0%
! CTTTGTTTGAGAGTTTAGAA+TGG + chr4_2:74403018-74403037 None:intergenic 30.0%
CATTCTAAACTCTCAAACAA+AGG - chr4_2:74403016-74403035 Msa0622040:intron 30.0%
! CAAAGGCTTAAATTTTCGAA+TGG - chr4_2:74403033-74403052 Msa0622040:intron 30.0%
AGGCGATCTTTAAATATAAG+CGG + chr4_2:74403412-74403431 None:intergenic 30.0%
CATCACAAACAAAAAAGAGA+TGG - chr4_2:74403458-74403477 Msa0622040:intron 30.0%
ACAAACAAAAAAGAGATGGA+AGG - chr4_2:74403462-74403481 Msa0622040:intron 30.0%
AAAATGCATATTGCTGAGAA+AGG - chr4_2:74403519-74403538 Msa0622040:intron 30.0%
! CATAAGCTTTGATTCTTTCA+GGG + chr4_2:74403824-74403843 None:intergenic 30.0%
! ACATAAGCTTTGATTCTTTC+AGG + chr4_2:74403825-74403844 None:intergenic 30.0%
AATAATGCAAGCAGAAATAG+TGG + chr4_2:74404006-74404025 None:intergenic 30.0%
TAACTTAGACAGATTCAAAG+GGG + chr4_2:74404032-74404051 None:intergenic 30.0%
GTAACTTAGACAGATTCAAA+GGG + chr4_2:74404033-74404052 None:intergenic 30.0%
AGTAACTTAGACAGATTCAA+AGG + chr4_2:74404034-74404053 None:intergenic 30.0%
!!! ACATGATTTTGATTTGTACG+TGG - chr4_2:74404062-74404081 Msa0622040:intron 30.0%
AAGTCAAAAGAGCAGTTAAA+AGG + chr4_2:74404129-74404148 None:intergenic 30.0%
AAAAACCAAAAAGAGGAAGA+GGG + chr4_2:74404155-74404174 None:intergenic 30.0%
AAAAAACCAAAAAGAGGAAG+AGG + chr4_2:74404156-74404175 None:intergenic 30.0%
TTTAGACACTAATTAGGGAA+CGG - chr4_2:74404189-74404208 Msa0622040:intron 30.0%
TTTAGACACTAATTAGGGAA+CGG - chr4_2:74404189-74404208 Msa0622040:intron 30.0%
TCGTCTTAATCTCTTTACTT+TGG - chr4_2:74404709-74404728 Msa0622040:intron 30.0%
CGTCTTAATCTCTTTACTTT+GGG - chr4_2:74404710-74404729 Msa0622040:intron 30.0%
GAAATACCAATATTAGGAGT+AGG + chr4_2:74404775-74404794 None:intergenic 30.0%
! AAAAAGTACAACTTGAGATC+AGG + chr4_2:74405020-74405039 None:intergenic 30.0%
TTATGACATCTCAATTAGGT+TGG + chr4_2:74405104-74405123 None:intergenic 30.0%
ATGCATAAGAGATTCAAACT+TGG - chr4_2:74405390-74405409 Msa0622040:intron 30.0%
TGCATAAGAGATTCAAACTT+GGG - chr4_2:74405391-74405410 Msa0622040:intron 30.0%
TGCTTAGAAATATGACTTCA+AGG + chr4_2:74405502-74405521 None:intergenic 30.0%
TAATTGTTGGGAAAACTGTT+TGG + chr4_2:74405528-74405547 None:intergenic 30.0%
CATTTAATTCAGGGATAAGT+CGG - chr4_2:74405779-74405798 Msa0622040:intron 30.0%
!! ATTTTAACAGTGAACACGTT+AGG - chr4_2:74405847-74405866 Msa0622040:intron 30.0%
! TTTTAACAGTGAACACGTTA+GGG - chr4_2:74405848-74405867 Msa0622040:intron 30.0%
TAAGTGTGCAGAACAAAAAA+TGG + chr4_2:74406038-74406057 None:intergenic 30.0%
!!! ATTTTTTGTTCTGCACACTT+AGG - chr4_2:74406037-74406056 Msa0622040:intron 30.0%
CTTAGGAATTAGGATTTACT+CGG - chr4_2:74406054-74406073 Msa0622040:intron 30.0%
ATTAGGATTTACTCGGAAAT+AGG - chr4_2:74406061-74406080 Msa0622040:intron 30.0%
!!! CGTTTTGAAACTAGAGAAAT+AGG + chr4_2:74406157-74406176 None:intergenic 30.0%
! ATTTCTCTAGTTTCAAAACG+TGG - chr4_2:74406157-74406176 Msa0622040:intron 30.0%
! AGTATATCTCGTTTTCCTTA+CGG - chr4_2:74406286-74406305 Msa0622040:intron 30.0%
! ATTTGAAATAGATGATAGGC+CGG - chr4_2:74406323-74406342 Msa0622040:intron 30.0%
TTGGGAAATATTGAAGGTAA+GGG + chr4_2:74406466-74406485 None:intergenic 30.0%
ATTGGGAAATATTGAAGGTA+AGG + chr4_2:74406467-74406486 None:intergenic 30.0%
CATGTGAATTAATGCTGAAT+TGG + chr4_2:74406485-74406504 None:intergenic 30.0%
ATAAGGTTCCGAAAATATAC+TGG - chr4_2:74406637-74406656 Msa0622040:intron 30.0%
! TCTTTTGTGATGACAATATG+GGG + chr4_2:74406760-74406779 None:intergenic 30.0%
! CTCTTTTGTGATGACAATAT+GGG + chr4_2:74406761-74406780 None:intergenic 30.0%
! ACTCTTTTGTGATGACAATA+TGG + chr4_2:74406762-74406781 None:intergenic 30.0%
TGAAATCATGAATCCAAAAC+TGG - chr4_2:74406876-74406895 Msa0622040:CDS 30.0%
CAGAGAACAAATATAATCAC+CGG - chr4_2:74406959-74406978 Msa0622040:intron 30.0%
TCCGGTAACAATAAAGATTT+AGG - chr4_2:74407003-74407022 Msa0622040:intron 30.0%
! AAAGATTTAGGAGTTGATCT+AGG - chr4_2:74407015-74407034 Msa0622040:intron 30.0%
! AATGAAATCAGAAGGTTTTC+CGG - chr4_2:74407047-74407066 Msa0622040:intron 30.0%
TGACATTTCGTGTCAAATAT+TGG - chr4_2:74407141-74407160 Msa0622040:intron 30.0%
GACATTTCGTGTCAAATATT+GGG - chr4_2:74407142-74407161 Msa0622040:intron 30.0%
ACATTTCGTGTCAAATATTG+GGG - chr4_2:74407143-74407162 Msa0622040:intron 30.0%
GATTCAGAGAATATCCAATT+TGG - chr4_2:74407211-74407230 Msa0622040:intron 30.0%
AGAGAATATCCAATTTGGTA+TGG - chr4_2:74407216-74407235 Msa0622040:intron 30.0%
GAGAATATCCAATTTGGTAT+GGG - chr4_2:74407217-74407236 Msa0622040:intron 30.0%
TGATTAAACCCATACCAAAT+TGG + chr4_2:74407228-74407247 None:intergenic 30.0%
ATGCTTATGAATAATCACGA+TGG - chr4_2:74407313-74407332 Msa0622040:intron 30.0%
! ACTTTGAGAAAGTTGTTGAT+TGG - chr4_2:74407417-74407436 Msa0622040:intron 30.0%
GCTTCTAAATTTGAAAAGAC+AGG - chr4_2:74407955-74407974 Msa0622040:intron 30.0%
CAATTTAGTTAGTCAAGAAG+AGG + chr4_2:74408131-74408150 None:intergenic 30.0%
CTCTTCTTGACTAACTAAAT+TGG - chr4_2:74408129-74408148 Msa0622040:intron 30.0%
! GGGCAAAACAATTTAAGTTA+GGG + chr4_2:74408247-74408266 None:intergenic 30.0%
! AGGGCAAAACAATTTAAGTT+AGG + chr4_2:74408248-74408267 None:intergenic 30.0%
!! AACTTAAATTGTTTTGCCCT+TGG - chr4_2:74408248-74408267 Msa0622040:intron 30.0%
!! ACTTAAATTGTTTTGCCCTT+GGG - chr4_2:74408249-74408268 Msa0622040:intron 30.0%
CAAATAGAAATACAAGTGCA+GGG + chr4_2:74408279-74408298 None:intergenic 30.0%
TAAGAAAGATGTGCCAAATT+TGG - chr4_2:74408662-74408681 Msa0622040:CDS 30.0%
ATAACAACTTCCTCCAAATT+TGG + chr4_2:74408678-74408697 None:intergenic 30.0%
CAATCTATGTTATTCTCTTG+CGG - chr4_2:74408858-74408877 Msa0622040:CDS 30.0%
ATAGAAGAATCATGAGTACA+AGG + chr4_2:74408929-74408948 None:intergenic 30.0%
ATTGCAGAGAAAGGAAAAGA+AGG - chr4_2:74399812-74399831 Msa0622040:three_prime_UTR 35.0%
TTACACAATCTTCCATTTGG+TGG - chr4_2:74399982-74400001 Msa0622040:three_prime_UTR 35.0%
TACACAATCTTCCATTTGGT+GGG - chr4_2:74399983-74400002 Msa0622040:three_prime_UTR 35.0%
ACAAAGATACCAACCAATGA+TGG + chr4_2:74400077-74400096 None:intergenic 35.0%
! CATAGGCTTTGATTCTTTCA+GGG + chr4_2:74400108-74400127 None:intergenic 35.0%
! ACATAGGCTTTGATTCTTTC+AGG + chr4_2:74400109-74400128 None:intergenic 35.0%
!! GGTTTCACTTTTGGATTTCT+GGG + chr4_2:74400154-74400173 None:intergenic 35.0%
!! AGGTTTCACTTTTGGATTTC+TGG + chr4_2:74400155-74400174 None:intergenic 35.0%
! TTTTGCTTGTGGTATAATGG+AGG - chr4_2:74400342-74400361 Msa0622040:intron 35.0%
ATGTACGGTGTATAATCAAG+AGG + chr4_2:74400672-74400691 None:intergenic 35.0%
! TACCATTTTCTTCGGTTGTT+GGG + chr4_2:74400845-74400864 None:intergenic 35.0%
! TCAGCTAGTACCATTTTCTT+CGG + chr4_2:74400853-74400872 None:intergenic 35.0%
! AATTTCAGCTTCCATTTTCC+CGG + chr4_2:74400994-74401013 None:intergenic 35.0%
ATGGAAGCTGAAATTGCTAA+AGG - chr4_2:74400999-74401018 Msa0622040:intron 35.0%
GCTTCCAAATTTGAAAAGAC+AGG - chr4_2:74401170-74401189 Msa0622040:intron 35.0%
!! ATTCTCGTATTGACTAACTG+TGG - chr4_2:74401360-74401379 Msa0622040:intron 35.0%
TGGACATCTGTAACTAACTT+GGG - chr4_2:74401387-74401406 Msa0622040:intron 35.0%
ATTATGCAACGCCAACTTAA+GGG + chr4_2:74401421-74401440 None:intergenic 35.0%
AATTATGCAACGCCAACTTA+AGG + chr4_2:74401422-74401441 None:intergenic 35.0%
TGGCGTTGCATAATTCTATT+TGG - chr4_2:74401427-74401446 Msa0622040:intron 35.0%
! CAATTTGAAAGCATGTCTGA+CGG + chr4_2:74401648-74401667 None:intergenic 35.0%
!! TGGTACTTTAATTTGTGCTC+CGG + chr4_2:74401847-74401866 None:intergenic 35.0%
CAAGAAAGATGTGCCAAATT+TGG - chr4_2:74401944-74401963 Msa0622040:intron 35.0%
ATAACCACTTCCTCCAAATT+TGG + chr4_2:74401960-74401979 None:intergenic 35.0%
TTTCTTCTTTCGAGACTTAC+AGG + chr4_2:74402513-74402532 None:intergenic 35.0%
CAATTGAGACAACAAGAAAC+GGG - chr4_2:74402605-74402624 Msa0622040:intron 35.0%
! GAAACGGGTTTAGAATTGAA+AGG - chr4_2:74402620-74402639 Msa0622040:intron 35.0%
! GTGAAAGGAATGAGGATTTT+GGG + chr4_2:74402766-74402785 None:intergenic 35.0%
! AGTGAAAGGAATGAGGATTT+TGG + chr4_2:74402767-74402786 None:intergenic 35.0%
! TTATCCTTTGTTTGCAAGCT+CGG + chr4_2:74402836-74402855 None:intergenic 35.0%
! TATCAGATGGAGATTTTGGA+TGG + chr4_2:74402872-74402891 None:intergenic 35.0%
ATTGTTGTCCAAGTAACACA+TGG - chr4_2:74403141-74403160 Msa0622040:intron 35.0%
TTGTTGTCCAAGTAACACAT+GGG - chr4_2:74403142-74403161 Msa0622040:intron 35.0%
! TTTACTTCCCATGTGTTACT+TGG + chr4_2:74403152-74403171 None:intergenic 35.0%
ACTTTACTTTAGCAACATCG+TGG + chr4_2:74403331-74403350 None:intergenic 35.0%
! TGTTTGAGTTTGTGAAGTGA+AGG + chr4_2:74403432-74403451 None:intergenic 35.0%
ATTGCTGAGAAAGGAAAAGA+AGG - chr4_2:74403528-74403547 Msa0622040:intron 35.0%
TAGCTACACAATCTTCCATT+TGG - chr4_2:74403695-74403714 Msa0622040:intron 35.0%
TACACAATCTTCCATTTGGT+AGG - chr4_2:74399983-74400002 Msa0622040:three_prime_UTR 35.0%
ACAAAGATACCAACCAATCA+TGG + chr4_2:74403793-74403812 None:intergenic 35.0%
! TTTGGGTTTCTGGGTAAATA+CGG + chr4_2:74403861-74403880 None:intergenic 35.0%
!! CATCAACAGGTTTCACTTTT+GGG + chr4_2:74400162-74400181 None:intergenic 35.0%
TTACTATATCTGCAGATTCC+AGG - chr4_2:74403923-74403942 Msa0622040:intron 35.0%
! TTTAACCCTCTTCCTCTTTT+TGG - chr4_2:74404147-74404166 Msa0622040:intron 35.0%
CTTAATCTCTTTACTTTGGG+AGG - chr4_2:74404713-74404732 Msa0622040:intron 35.0%
AGGAAGTTTGAAGACACATA+AGG - chr4_2:74404733-74404752 Msa0622040:intron 35.0%
GACACATAAGGAAATTGTTG+TGG - chr4_2:74404745-74404764 Msa0622040:intron 35.0%
! TGTATAGATTGTGCTGATGT+TGG - chr4_2:74404875-74404894 Msa0622040:CDS 35.0%
ACAAAAAAGCCCTGTTGAAA+TGG + chr4_2:74405189-74405208 None:intergenic 35.0%
TCTTATGCATACAAACAACC+GGG + chr4_2:74405380-74405399 None:intergenic 35.0%
CTCTTATGCATACAAACAAC+CGG + chr4_2:74405381-74405400 None:intergenic 35.0%
AGAAAGGTTGGAGTTATCTT+TGG + chr4_2:74405592-74405611 None:intergenic 35.0%
TAATGCTCCTAAGATCAAAG+AGG + chr4_2:74405819-74405838 None:intergenic 35.0%
!! TTTGATCTTAGGAGCATTAG+AGG - chr4_2:74405820-74405839 Msa0622040:intron 35.0%
! TAATGGTTTGAAACATGTGC+AGG + chr4_2:74405978-74405997 None:intergenic 35.0%
TGGTTCAATTGGTTAAAAGG+AGG + chr4_2:74406018-74406037 None:intergenic 35.0%
!!! TTGCGTGGGATTTTGATTTT+TGG - chr4_2:74406235-74406254 Msa0622040:intron 35.0%
!!! TGCGTGGGATTTTGATTTTT+GGG - chr4_2:74406236-74406255 Msa0622040:intron 35.0%
GCTGAATTGGGAAATATTGA+AGG + chr4_2:74406472-74406491 None:intergenic 35.0%
!! ATTTTTGCAGGAGTGCATTT+CGG - chr4_2:74406507-74406526 Msa0622040:intron 35.0%
AACATTCATGTTTACGTGTC+CGG - chr4_2:74406570-74406589 Msa0622040:intron 35.0%
TAGCTTTCCAGTATTCATTC+CGG + chr4_2:74406592-74406611 None:intergenic 35.0%
ATACTTTCATTACACATGGC+TGG + chr4_2:74406698-74406717 None:intergenic 35.0%
GCGAATACTTTCATTACACA+TGG + chr4_2:74406702-74406721 None:intergenic 35.0%
GGGGATATAATATATAGTGC+TGG + chr4_2:74406741-74406760 None:intergenic 35.0%
CTGTTCTATTGAATCCGAAA+AGG + chr4_2:74406841-74406860 None:intergenic 35.0%
TTTCGGATTCAATAGAACAG+TGG - chr4_2:74406841-74406860 Msa0622040:CDS 35.0%
!! GACATGGTTATTTTGTTTCC+TGG + chr4_2:74406912-74406931 None:intergenic 35.0%
! GATGTTTTATGGGTTTGACA+TGG + chr4_2:74406928-74406947 None:intergenic 35.0%
CATTGTGAATTTCACGTTTC+CGG + chr4_2:74406981-74407000 None:intergenic 35.0%
CGTGAAATTCACAATGATTC+CGG - chr4_2:74406985-74407004 Msa0622040:intron 35.0%
CAACGTGTAACTGAAGAAAA+TGG - chr4_2:74407362-74407381 Msa0622040:intron 35.0%
!!! AGAAATTGGTTTTAACCCTC+AGG - chr4_2:74407504-74407523 Msa0622040:intron 35.0%
! TTTTAACCCTCAGGTTTGTA+GGG - chr4_2:74407513-74407532 Msa0622040:intron 35.0%
AGTCTTAGTAATCCAGAGTT+CGG - chr4_2:74407542-74407561 Msa0622040:intron 35.0%
ATCTAAGTGATTGAGCTCAA+TGG + chr4_2:74407661-74407680 None:intergenic 35.0%
!! AATTCAGCTTCCATTTTTCC+TGG + chr4_2:74407778-74407797 None:intergenic 35.0%
!! ATGGAAGCTGAATTTGCTAA+AGG - chr4_2:74407784-74407803 Msa0622040:CDS 35.0%
TCAAGAACATGCTTACAAGT+AGG - chr4_2:74407824-74407843 Msa0622040:intron 35.0%
ATGCTTACAAGTAGGAATTC+TGG - chr4_2:74407832-74407851 Msa0622040:intron 35.0%
TGCTTACAAGTAGGAATTCT+GGG - chr4_2:74407833-74407852 Msa0622040:intron 35.0%
TTTGAAAAGACAGGATTCAG+TGG - chr4_2:74407964-74407983 Msa0622040:intron 35.0%
CCAAATAGAAATACAAGTGC+AGG + chr4_2:74408280-74408299 None:intergenic 35.0%
! CCTGCACTTGTATTTCTATT+TGG - chr4_2:74408277-74408296 Msa0622040:intron 35.0%
TCAAGGATTGTAACATCTGA+AGG + chr4_2:74408341-74408360 None:intergenic 35.0%
!! ATGGACTGGAGCAAAAATTA+AGG - chr4_2:74408557-74408576 Msa0622040:intron 35.0%
GATGCAGTTTACACTTCATT+TGG - chr4_2:74408609-74408628 Msa0622040:CDS 35.0%
TTTGGAGGAAGTTGTTATAC+AGG - chr4_2:74408680-74408699 Msa0622040:CDS 35.0%
ACTTAACTCCTAGTGATTAG+TGG + chr4_2:74408807-74408826 None:intergenic 35.0%
AGGAATAGAACACAGAACAG+TGG - chr4_2:74399766-74399785 Msa0622040:three_prime_UTR 40.0%
GTGTAACTACTAATGGAAGC+TGG + chr4_2:74399968-74399987 None:intergenic 40.0%
TCTTCCTTGTAGCTCATGAT+TGG - chr4_2:74400047-74400066 Msa0622040:CDS 40.0%
CTTCCTTGTAGCTCATGATT+GGG - chr4_2:74400048-74400067 Msa0622040:CDS 40.0%
TTCCTTGTAGCTCATGATTG+GGG - chr4_2:74400049-74400068 Msa0622040:CDS 40.0%
! CCATCAACAGGTTTCACTTT+TGG + chr4_2:74400163-74400182 None:intergenic 40.0%
CCAAAAGTGAAACCTGTTGA+TGG - chr4_2:74400160-74400179 Msa0622040:CDS 40.0%
TTCGGTTGTTGGGTTTCAAT+TGG + chr4_2:74400835-74400854 None:intergenic 40.0%
AACCCAACAACCGAAGAAAA+TGG - chr4_2:74400840-74400859 Msa0622040:CDS 40.0%
! GTACCATTTTCTTCGGTTGT+TGG + chr4_2:74400846-74400865 None:intergenic 40.0%
!! TCACATGGATTGGAATTGGA+TGG + chr4_2:74400964-74400983 None:intergenic 40.0%
! ATTTCAGCTTCCATTTTCCC+GGG + chr4_2:74400993-74401012 None:intergenic 40.0%
TAGTCCAGAACTGTTGATCA+AGG - chr4_2:74401022-74401041 Msa0622040:intron 40.0%
AGGATTACGACTTGTAAGCA+TGG + chr4_2:74401048-74401067 None:intergenic 40.0%
ATGCTTACAAGTCGTAATCC+TGG - chr4_2:74401047-74401066 Msa0622040:intron 40.0%
TGCTTACAAGTCGTAATCCT+GGG - chr4_2:74401048-74401067 Msa0622040:intron 40.0%
ATAATATGCCTTCTTTGGGC+AGG + chr4_2:74401082-74401101 None:intergenic 40.0%
GGCATTGTACTTGAAACACT+GGG + chr4_2:74401110-74401129 None:intergenic 40.0%
GAAAAGACAGGATTTAGTGG+TGG - chr4_2:74401182-74401201 Msa0622040:intron 40.0%
! TATTGACTAACTGTGGTGAG+TGG - chr4_2:74401367-74401386 Msa0622040:intron 40.0%
GTGGACATCTGTAACTAACT+TGG - chr4_2:74401386-74401405 Msa0622040:intron 40.0%
TAACAGAAATTGGGAGCTCA+CGG - chr4_2:74401812-74401831 Msa0622040:intron 40.0%
GTACCAGTGAAGTTCATCAT+AGG - chr4_2:74401861-74401880 Msa0622040:intron 40.0%
TCACCTATGATGAACTTCAC+TGG + chr4_2:74401867-74401886 None:intergenic 40.0%
GAAGTTCATCATAGGTGATC+TGG - chr4_2:74401869-74401888 Msa0622040:intron 40.0%
ACCAAACAATACATCGAGAG+CGG - chr4_2:74401915-74401934 Msa0622040:intron 40.0%
GAAAGATGTGCCAAATTTGG+AGG - chr4_2:74401947-74401966 Msa0622040:intron 40.0%
GAGGAAGTGGTTATACAGAA+AGG - chr4_2:74401966-74401985 Msa0622040:intron 40.0%
AGTGGTTATACAGAAAGGTG+TGG - chr4_2:74401971-74401990 Msa0622040:intron 40.0%
TTTCGAGACTTACAGGAGTA+AGG + chr4_2:74402506-74402525 None:intergenic 40.0%
! GGGTTTAGAATTGAAAGGGT+CGG - chr4_2:74402625-74402644 Msa0622040:intron 40.0%
! AAAGGAATGAGGATTTTGGG+AGG + chr4_2:74402763-74402782 None:intergenic 40.0%
AGAAGCAAGTGAAAGGAATG+AGG + chr4_2:74402774-74402793 None:intergenic 40.0%
! GATGGAGATTTTGGATGGTT+GGG + chr4_2:74402867-74402886 None:intergenic 40.0%
! AGATGGAGATTTTGGATGGT+TGG + chr4_2:74402868-74402887 None:intergenic 40.0%
GATAAAAGGAAAGGACGAAG+TGG + chr4_2:74402987-74403006 None:intergenic 40.0%
! ACACCATCTCTTTAGAGAAG+AGG + chr4_2:74403381-74403400 None:intergenic 40.0%
CACAGAACAGTGGAAGTAAA+TGG - chr4_2:74403492-74403511 Msa0622040:intron 40.0%
TTCCTGAACTTTGGTACTCT+TGG - chr4_2:74403577-74403596 Msa0622040:intron 40.0%
GTGTAGCTACTAACTGAAGT+CGG + chr4_2:74403684-74403703 None:intergenic 40.0%
CAACGATATCACCTACCAAA+TGG + chr4_2:74403713-74403732 None:intergenic 40.0%
!!! GGTTTCACTTTTGGGTTTCT+GGG + chr4_2:74403870-74403889 None:intergenic 40.0%
!!! AGGTTTCACTTTTGGGTTTC+TGG + chr4_2:74403871-74403890 None:intergenic 40.0%
! CCATCAACAGGTTTCACTTT+TGG + chr4_2:74400163-74400182 None:intergenic 40.0%
CCAAAAGTGAAACCTGTTGA+TGG - chr4_2:74400160-74400179 Msa0622040:CDS 40.0%
! TGATTTGTACGTGGTAGACT+TGG - chr4_2:74404071-74404090 Msa0622040:intron 40.0%
GGTGATCCTACTCCTAATAT+TGG - chr4_2:74404766-74404785 Msa0622040:intron 40.0%
CTATCACTAGTCACACTTGA+CGG - chr4_2:74404794-74404813 Msa0622040:intron 40.0%
TATCACTAGTCACACTTGAC+GGG - chr4_2:74404795-74404814 Msa0622040:intron 40.0%
CCTGTGGATAAAACCCATAT+GGG + chr4_2:74404933-74404952 None:intergenic 40.0%
!! CCATATGGGTTTTATCCACA+GGG - chr4_2:74404931-74404950 Msa0622040:CDS 40.0%
! TTTATCCACAGGGTTTTCCT+TGG - chr4_2:74404941-74404960 Msa0622040:CDS 40.0%
GGTGAGACAAGAGATATGAT+GGG + chr4_2:74405358-74405377 None:intergenic 40.0%
CTTATGCATACAAACAACCG+GGG + chr4_2:74405379-74405398 None:intergenic 40.0%
CATTTACACGAGTAGCACTT+TGG + chr4_2:74405472-74405491 None:intergenic 40.0%
ATTGAGCTAGCTCATGAGAA+AGG + chr4_2:74405608-74405627 None:intergenic 40.0%
AACATTCCATCACAAGAAGC+TGG - chr4_2:74405722-74405741 Msa0622040:intron 40.0%
! AACACTGATGATGCTGCTTA+TGG + chr4_2:74405758-74405777 None:intergenic 40.0%
TTAATTCAGGGATAAGTCGG+AGG - chr4_2:74405782-74405801 Msa0622040:intron 40.0%
TAATTCAGGGATAAGTCGGA+GGG - chr4_2:74405783-74405802 Msa0622040:intron 40.0%
CTAAGATCAAAGAGGTGATG+CGG + chr4_2:74405811-74405830 None:intergenic 40.0%
TTGAAACATGTGCAGGTTCT+AGG + chr4_2:74405971-74405990 None:intergenic 40.0%
GTTCTGCACACTTAGGAATT+AGG - chr4_2:74406044-74406063 Msa0622040:intron 40.0%
!! TATTGTCGCAACGCCATTTT+TGG + chr4_2:74406197-74406216 None:intergenic 40.0%
!! TCTTAATTTGCCTGTTGCGT+GGG - chr4_2:74406221-74406240 Msa0622040:intron 40.0%
AAATCAAAATCCCACGCAAC+AGG + chr4_2:74406234-74406253 None:intergenic 40.0%
!!! GGGATTTTGATTTTTGGGTG+TGG - chr4_2:74406241-74406260 Msa0622040:intron 40.0%
TGATAGGCCGGATAAAAACT+TGG - chr4_2:74406335-74406354 Msa0622040:intron 40.0%
GATAGGCCGGATAAAAACTT+GGG - chr4_2:74406336-74406355 Msa0622040:intron 40.0%
! AGGGGTGAAAGTATATGTGT+CGG + chr4_2:74406379-74406398 None:intergenic 40.0%
TTGGGAAACGTTTATGGTGA+AGG + chr4_2:74406540-74406559 None:intergenic 40.0%
! TGGAAATCGTGTTCCAGTTT+TGG + chr4_2:74406892-74406911 None:intergenic 40.0%
AAAACTGGAACACGATTTCC+AGG - chr4_2:74406891-74406910 Msa0622040:CDS 40.0%
! TTGGGGTGAAGGTATAAATG+TGG - chr4_2:74407160-74407179 Msa0622040:intron 40.0%
! TGGGGTGAAGGTATAAATGT+GGG - chr4_2:74407161-74407180 Msa0622040:intron 40.0%
!! GTTTTAACCCTCAGGTTTGT+AGG - chr4_2:74407512-74407531 Msa0622040:intron 40.0%
TTTAACCCTCAGGTTTGTAG+GGG - chr4_2:74407514-74407533 Msa0622040:intron 40.0%
TATTTCCCCTACAAACCTGA+GGG + chr4_2:74407522-74407541 None:intergenic 40.0%
TTATTTCCCCTACAAACCTG+AGG + chr4_2:74407523-74407542 None:intergenic 40.0%
TTTCTGCCAGAAATCGAACT+CGG - chr4_2:74407598-74407617 Msa0622040:CDS 40.0%
!! TCCTCTAGGACAAATCGTTT+GGG + chr4_2:74407629-74407648 None:intergenic 40.0%
AATGGTTAATGAGCTCCTCT+AGG + chr4_2:74407643-74407662 None:intergenic 40.0%
CAAATATCAATCCATGTGCC+AGG - chr4_2:74407750-74407769 Msa0622040:CDS 40.0%
!! GAAGCTGAATTTGCTAAAGG+TGG - chr4_2:74407787-74407806 Msa0622040:CDS 40.0%
TGTTCTTGATCAGCAGTTCT+GGG + chr4_2:74407813-74407832 None:intergenic 40.0%
ATGTTCTTGATCAGCAGTTC+TGG + chr4_2:74407814-74407833 None:intergenic 40.0%
! TTAGGTATCACGCCTTCTTT+TGG + chr4_2:74407871-74407890 None:intergenic 40.0%
GTACTTGAAGCATGTGGATT+AGG + chr4_2:74407889-74407908 None:intergenic 40.0%
TCCACATGCTTCAAGTACAA+AGG - chr4_2:74407891-74407910 Msa0622040:intron 40.0%
CATTCACGTACCACTTATAC+AGG - chr4_2:74408063-74408082 Msa0622040:intron 40.0%
ACAAAGCAATACATCGAGAG+TGG - chr4_2:74408633-74408652 Msa0622040:CDS 40.0%
GAAAGATGTGCCAAATTTGG+AGG - chr4_2:74401947-74401966 Msa0622040:intron 40.0%
GAGGAAGTTGTTATACAGGA+AGG - chr4_2:74408684-74408703 Msa0622040:CDS 40.0%
AGTTGTTATACAGGAAGGTG+TGG - chr4_2:74408689-74408708 Msa0622040:CDS 40.0%
ATTGCAAGCCACTAATCACT+AGG - chr4_2:74408796-74408815 Msa0622040:CDS 40.0%
CACAGAACAGTGGAAGTGAA+TGG - chr4_2:74399776-74399795 Msa0622040:three_prime_UTR 45.0%
TTCCTGAACTCTGGTACTCT+TGG - chr4_2:74399861-74399880 Msa0622040:three_prime_UTR 45.0%
ACTAATGGAAGCTGGAGCAT+CGG + chr4_2:74399960-74399979 None:intergenic 45.0%
CGGAACACTGAGACAAACAT+AGG + chr4_2:74400125-74400144 None:intergenic 45.0%
!! CCTGTCACATGGATTGGAAT+TGG + chr4_2:74400968-74400987 None:intergenic 45.0%
CCAATTCCAATCCATGTGAC+AGG - chr4_2:74400965-74400984 Msa0622040:intron 45.0%
! ATGGCCTTGATCAACAGTTC+TGG + chr4_2:74401029-74401048 None:intergenic 45.0%
! GGGCATTGTACTTGAAACAC+TGG + chr4_2:74401111-74401130 None:intergenic 45.0%
CATATTCTCCATGACCGAGA+GGG + chr4_2:74401338-74401357 None:intergenic 45.0%
TCATATTCTCCATGACCGAG+AGG + chr4_2:74401339-74401358 None:intergenic 45.0%
GGGTTGTTTGACCCTTAAGT+TGG - chr4_2:74401407-74401426 Msa0622040:intron 45.0%
!! TTGTAGGTATCGATGGTGGT+AGG + chr4_2:74401624-74401643 None:intergenic 45.0%
ACCGCTCTCGATGTATTGTT+TGG + chr4_2:74401919-74401938 None:intergenic 45.0%
AAACAATACATCGAGAGCGG+TGG - chr4_2:74401918-74401937 Msa0622040:intron 45.0%
TGTGCCAAATTTGGAGGAAG+TGG - chr4_2:74401953-74401972 Msa0622040:intron 45.0%
GGTGAATCTAAACTGCGTGA+TGG + chr4_2:74402334-74402353 None:intergenic 45.0%
ACCATGTGTTTAGGCCATGT+AGG - chr4_2:74402422-74402441 Msa0622040:intron 45.0%
CCATGTGTTTAGGCCATGTA+GGG - chr4_2:74402423-74402442 Msa0622040:intron 45.0%
AATCTCGAGTCTCATGTGAG+TGG - chr4_2:74403105-74403124 Msa0622040:intron 45.0%
! GGTCCTCTTCTCTAAAGAGA+TGG - chr4_2:74403375-74403394 Msa0622040:intron 45.0%
AAAGTTCAGGAAAGCCGTGA+AGG + chr4_2:74403569-74403588 None:intergenic 45.0%
TTCACGGCTTTCCTGAACTT+TGG - chr4_2:74403568-74403587 Msa0622040:intron 45.0%
ACTAACTGAAGTCGGAGCAT+CGG + chr4_2:74403676-74403695 None:intergenic 45.0%
!! CCCATATGGGTTTTATCCAC+AGG - chr4_2:74404930-74404949 Msa0622040:CDS 45.0%
CCCTGTGGATAAAACCCATA+TGG + chr4_2:74404934-74404953 None:intergenic 45.0%
! GAGATATGATGGGAGTTGTC+AGG + chr4_2:74405348-74405367 None:intergenic 45.0%
GGGTGAGACAAGAGATATGA+TGG + chr4_2:74405359-74405378 None:intergenic 45.0%
TCATATCTCTTGTCTCACCC+CGG - chr4_2:74405359-74405378 Msa0622040:intron 45.0%
TCAAACTTGGGATGTGTGTG+TGG - chr4_2:74405403-74405422 Msa0622040:intron 45.0%
CACCAATGACACCAAAGCTA+TGG - chr4_2:74405444-74405463 Msa0622040:intron 45.0%
!! TGCCATAGCTTTGGTGTCAT+TGG + chr4_2:74405449-74405468 None:intergenic 45.0%
AGCTAGCTCATGAGAAAGGT+TGG + chr4_2:74405604-74405623 None:intergenic 45.0%
! GATGCTGCTTATGGTAGTCT+TGG + chr4_2:74405749-74405768 None:intergenic 45.0%
CGCATCACCTCTTTGATCTT+AGG - chr4_2:74405809-74405828 Msa0622040:intron 45.0%
!! GTAGTTGGGTTGTTGCTTTC+TGG + chr4_2:74406109-74406128 None:intergenic 45.0%
CACGCAACAGGCAAATTAAG+AGG + chr4_2:74406222-74406241 None:intergenic 45.0%
!! CTCTTAATTTGCCTGTTGCG+TGG - chr4_2:74406220-74406239 Msa0622040:intron 45.0%
TAAATGGGGAAAGAGCCGTA+AGG + chr4_2:74406304-74406323 None:intergenic 45.0%
! GGGTGAAAGTATATGTGTCG+GGG + chr4_2:74406377-74406396 None:intergenic 45.0%
! GGGGTGAAAGTATATGTGTC+GGG + chr4_2:74406378-74406397 None:intergenic 45.0%
TACGTGTCCGGAATGAATAC+TGG - chr4_2:74406582-74406601 Msa0622040:intron 45.0%
! AGAAGGTTTTCCGGCAAAGA+AGG - chr4_2:74407056-74407075 Msa0622040:intron 45.0%
! GAAGGTTTTCCGGCAAAGAA+GGG - chr4_2:74407057-74407076 Msa0622040:intron 45.0%
CGTGTCAAATATTGGGGTGA+AGG - chr4_2:74407149-74407168 Msa0622040:intron 45.0%
! GGGGTGAAGGTATAAATGTG+GGG - chr4_2:74407162-74407181 Msa0622040:intron 45.0%
! GGGTGAAGGTATAAATGTGG+GGG - chr4_2:74407163-74407182 Msa0622040:intron 45.0%
AAGGTATAAATGTGGGGGTG+TGG - chr4_2:74407168-74407187 Msa0622040:intron 45.0%
! AGGTATAAATGTGGGGGTGT+GGG - chr4_2:74407169-74407188 Msa0622040:intron 45.0%
TCTCGAAGGTAAGTAAAGCC+TGG - chr4_2:74407565-74407584 Msa0622040:CDS 45.0%
GGCAGAAACAATTCTTGACC+AGG + chr4_2:74407586-74407605 None:intergenic 45.0%
GAGAAACCGAGTTCGATTTC+TGG + chr4_2:74407607-74407626 None:intergenic 45.0%
TCCCAAACGATTTGTCCTAG+AGG - chr4_2:74407625-74407644 Msa0622040:CDS 45.0%
!! CTCCTCTAGGACAAATCGTT+TGG + chr4_2:74407630-74407649 None:intergenic 45.0%
!! CTTCCATTTTTCCTGGTTCC+TGG + chr4_2:74407771-74407790 None:intergenic 45.0%
! CCTTCTTTTGGTAGGATTGG+TGG + chr4_2:74407859-74407878 None:intergenic 45.0%
CCACCAATCCTACCAAAAGA+AGG - chr4_2:74407856-74407875 Msa0622040:intron 45.0%
! ACGCCTTCTTTTGGTAGGAT+TGG + chr4_2:74407862-74407881 None:intergenic 45.0%
! GTATCACGCCTTCTTTTGGT+AGG + chr4_2:74407867-74407886 None:intergenic 45.0%
GCCTTTGTACTTGAAGCATG+TGG + chr4_2:74407895-74407914 None:intergenic 45.0%
CTTCTTGTGAGAGCCAAGAA+GGG + chr4_2:74407921-74407940 None:intergenic 45.0%
TCTTCTTGTGAGAGCCAAGA+AGG + chr4_2:74407922-74407941 None:intergenic 45.0%
!! CAAGGGGCACCTAGTTAATT+TGG + chr4_2:74408038-74408057 None:intergenic 45.0%
GTACGTGAATGATGCACAAG+GGG + chr4_2:74408054-74408073 None:intergenic 45.0%
GGTACGTGAATGATGCACAA+GGG + chr4_2:74408055-74408074 None:intergenic 45.0%
TGGTACGTGAATGATGCACA+AGG + chr4_2:74408056-74408075 None:intergenic 45.0%
ACGTACCACTTATACAGGTC+CGG - chr4_2:74408068-74408087 Msa0622040:intron 45.0%
!! AAATTGTTTTGCCCTTGGGC+TGG - chr4_2:74408253-74408272 Msa0622040:intron 45.0%
TCACCTGTGATGAATGTCAC+TGG + chr4_2:74408585-74408604 None:intergenic 45.0%
AAGCAATACATCGAGAGTGG+AGG - chr4_2:74408636-74408655 Msa0622040:CDS 45.0%
TGATATCCTCAGCAGCTTCT+TGG + chr4_2:74408728-74408747 None:intergenic 45.0%
!!! ATTAATTATTTTTAAAATCA+AGG + chr4_2:74401502-74401521 None:intergenic 5.0%
!!! TTGATTTTAAAAATAATTAA+TGG - chr4_2:74401501-74401520 Msa0622040:intron 5.0%
!! AAAAAAAAAAAAAAAAAAAG+AGG + chr4_2:74404384-74404403 None:intergenic 5.0%
!!! TAAAATTTATACTTTTTTTA+AGG + chr4_2:74404625-74404644 None:intergenic 5.0%
CCTGTTGTCCTGTTCCTTCA+CGG - chr4_2:74399836-74399855 Msa0622040:three_prime_UTR 50.0%
AGAGTTCAGGAAAGCCGTGA+AGG + chr4_2:74399853-74399872 None:intergenic 50.0%
TTCACGGCTTTCCTGAACTC+TGG - chr4_2:74399852-74399871 Msa0622040:three_prime_UTR 50.0%
AGCAACAGCACAGTAACCGA+GGG + chr4_2:74399912-74399931 None:intergenic 50.0%
CAACGATGTCACCCACCAAA+TGG + chr4_2:74399997-74400016 None:intergenic 50.0%
!! GTTGCTCTCATCGACTCACT+TGG - chr4_2:74400013-74400032 Msa0622040:CDS 50.0%
CACCCCAATCATGAGCTACA+AGG + chr4_2:74400054-74400073 None:intergenic 50.0%
! CATGATTGGGGTGCCATCAT+TGG - chr4_2:74400061-74400080 Msa0622040:CDS 50.0%
! ATTGGGGTGCCATCATTGGT+TGG - chr4_2:74400065-74400084 Msa0622040:CDS 50.0%
ACAGCTCGCATTCCATCAAC+AGG + chr4_2:74400175-74400194 None:intergenic 50.0%
GATGGAATGCGAGCTGTGTA+TGG - chr4_2:74400178-74400197 Msa0622040:CDS 50.0%
CAATCCATGTGACAGGAACC+CGG - chr4_2:74400972-74400991 Msa0622040:intron 50.0%
AATCCATGTGACAGGAACCC+GGG - chr4_2:74400973-74400992 Msa0622040:intron 50.0%
ATGCCTTCTTTGGGCAGGAT+TGG + chr4_2:74401077-74401096 None:intergenic 50.0%
AGAGGGTTGGAACCTTGGAT+TGG + chr4_2:74401321-74401340 None:intergenic 50.0%
ATCCAAGGTTCCAACCCTCT+CGG - chr4_2:74401321-74401340 Msa0622040:intron 50.0%
AGTGATGTGTAGGCTCACGA+AGG + chr4_2:74401585-74401604 None:intergenic 50.0%
!! TGACGGCTTGTAGGTATCGA+TGG + chr4_2:74401631-74401650 None:intergenic 50.0%
AAGCATGTCTGACGGCTTGT+AGG + chr4_2:74401640-74401659 None:intergenic 50.0%
TGATTTCCTCGGCAGCTTCT+CGG + chr4_2:74402010-74402029 None:intergenic 50.0%
CCCTACATGGCCTAAACACA+TGG + chr4_2:74402426-74402445 None:intergenic 50.0%
GTTTGCAAGCTCGGAAGGAA+TGG + chr4_2:74402827-74402846 None:intergenic 50.0%
! CCTTTGTTTGCAAGCTCGGA+AGG + chr4_2:74402832-74402851 None:intergenic 50.0%
CCTTCCGAGCTTGCAAACAA+AGG - chr4_2:74402829-74402848 Msa0622040:intron 50.0%
AGGAGTAGAGCACAGAACAG+TGG - chr4_2:74403482-74403501 Msa0622040:intron 50.0%
CCTGTTGTCCTGTTCCTTCA+CGG - chr4_2:74399836-74399855 Msa0622040:three_prime_UTR 50.0%
!! CGCCAAGAGTACCAAAGTTC+AGG + chr4_2:74403582-74403601 None:intergenic 50.0%
!! GTTGCTCTCATCGACTCACT+CGG - chr4_2:74400013-74400032 Msa0622040:CDS 50.0%
CATGAGCAACGAGGAAGACT+TGG + chr4_2:74403761-74403780 None:intergenic 50.0%
TCTTCCTCGTTGCTCATGAC+TGG - chr4_2:74403763-74403782 Msa0622040:intron 50.0%
CTTCCTCGTTGCTCATGACT+GGG - chr4_2:74403764-74403783 Msa0622040:intron 50.0%
TTCCTCGTTGCTCATGACTG+GGG - chr4_2:74403765-74403784 Msa0622040:intron 50.0%
AAAGCTCGCATGCCATCAAC+AGG + chr4_2:74403891-74403910 None:intergenic 50.0%
!! GATGGCATGCGAGCTTTGTT+TGG - chr4_2:74403894-74403913 Msa0622040:intron 50.0%
CTTCACCAAGGAAAACCCTG+TGG + chr4_2:74404949-74404968 None:intergenic 50.0%
AACTTGGGATGTGTGTGTGG+TGG - chr4_2:74405406-74405425 Msa0622040:intron 50.0%
! TGTGGTGGAGATGCAAGCTA+TGG - chr4_2:74405421-74405440 Msa0622040:intron 50.0%
!! GCACTTTGGTGCCATAGCTT+TGG + chr4_2:74405458-74405477 None:intergenic 50.0%
CTTGGTCCAGCTTCTTGTGA+TGG + chr4_2:74405731-74405750 None:intergenic 50.0%
GAGAGAGCAATTCACGATGC+TGG - chr4_2:74406782-74406801 Msa0622040:CDS 50.0%
! GGTATAAATGTGGGGGTGTG+GGG - chr4_2:74407170-74407189 Msa0622040:intron 50.0%
AATCCAGAGTTCGGTCTCGA+AGG - chr4_2:74407551-74407570 Msa0622040:intron 50.0%
TTACCTTCGAGACCGAACTC+TGG + chr4_2:74407557-74407576 None:intergenic 50.0%
! TTTTCCTGGTTCCTGGCACA+TGG + chr4_2:74407764-74407783 None:intergenic 50.0%
GTGCCAGGAACCAGGAAAAA+TGG - chr4_2:74407765-74407784 Msa0622040:CDS 50.0%
TTGTGAGAGCCAAGAAGGGA+GGG + chr4_2:74407917-74407936 None:intergenic 50.0%
TTCGACCGGACCTGTATAAG+TGG + chr4_2:74408076-74408095 None:intergenic 50.0%
ACTTATACAGGTCCGGTCGA+AGG - chr4_2:74408075-74408094 Msa0622040:intron 50.0%
GTGCCAGTGACATTCATCAC+AGG - chr4_2:74408579-74408598 Msa0622040:CDS 50.0%
CAACAACCAAGAAGCTGCTG+AGG - chr4_2:74408719-74408738 Msa0622040:intron 50.0%
CCGTGAAGGAACAGGACAAC+AGG + chr4_2:74399839-74399858 None:intergenic 55.0%
CAGGAAAGCCGTGAAGGAAC+AGG + chr4_2:74399847-74399866 None:intergenic 55.0%
!! CGCCAAGAGTACCAGAGTTC+AGG + chr4_2:74399866-74399885 None:intergenic 55.0%
AGCCAAGAGCAGCAATCTGG+TGG + chr4_2:74399889-74399908 None:intergenic 55.0%
ATTGCTGCTCTTGGCTCCCT+CGG - chr4_2:74399893-74399912 Msa0622040:three_prime_UTR 55.0%
GAGCAACAGCACAGTAACCG+AGG + chr4_2:74399913-74399932 None:intergenic 55.0%
GCTCCAGATCTCCGTGGTTA+CGG - chr4_2:74399929-74399948 Msa0622040:three_prime_UTR 55.0%
CGGGTTCCTGTCACATGGAT+TGG + chr4_2:74400974-74400993 None:intergenic 55.0%
TTTCCCGGGTTCCTGTCACA+TGG + chr4_2:74400979-74400998 None:intergenic 55.0%
GTGACAGGAACCCGGGAAAA+TGG - chr4_2:74400980-74400999 Msa0622040:intron 55.0%
CCTTCTTTGGGCAGGATTGG+TGG + chr4_2:74401074-74401093 None:intergenic 55.0%
CCACCAATCCTGCCCAAAGA+AGG - chr4_2:74401071-74401090 Msa0622040:intron 55.0%
CTTCTTGCGAGAGCCAGGAA+GGG + chr4_2:74401136-74401155 None:intergenic 55.0%
TCTTCTTGCGAGAGCCAGGA+AGG + chr4_2:74401137-74401156 None:intergenic 55.0%
GACATCTTCTTGCGAGAGCC+AGG + chr4_2:74401141-74401160 None:intergenic 55.0%
TTCTCCATGACCGAGAGGGT+TGG + chr4_2:74401334-74401353 None:intergenic 55.0%
!! CGGCTTGTAGGTATCGATGG+TGG + chr4_2:74401628-74401647 None:intergenic 55.0%
! AGAGTGGCGTCGCTTTCCTT+TGG - chr4_2:74402449-74402468 Msa0622040:intron 55.0%
CTCGAGTCTCATGTGAGTGG+TGG - chr4_2:74403108-74403127 Msa0622040:intron 55.0%
CCGTGAAGGAACAGGACAAC+AGG + chr4_2:74399839-74399858 None:intergenic 55.0%
CAGGAAAGCCGTGAAGGAAC+AGG + chr4_2:74399847-74399866 None:intergenic 55.0%
AGCAACAGCACGGTAACCGA+GGG + chr4_2:74403628-74403647 None:intergenic 55.0%
! GGAGATCTGGAGCAACAGCA+CGG + chr4_2:74399922-74399941 None:intergenic 55.0%
GCTCCAGATCTCCGTGGATA+CGG - chr4_2:74403645-74403664 Msa0622040:intron 55.0%
TCACCGTATCCACGGAGATC+TGG + chr4_2:74403651-74403670 None:intergenic 55.0%
!! CATCGGTGTCACCGTATCCA+CGG + chr4_2:74403659-74403678 None:intergenic 55.0%
! CATGACTGGGGTGCCATGAT+TGG - chr4_2:74403777-74403796 Msa0622040:intron 55.0%
! ACTGGGGTGCCATGATTGGT+TGG - chr4_2:74403781-74403800 Msa0622040:intron 55.0%
TCCGGCAAAGAAGGGTTCTG+TGG - chr4_2:74407065-74407084 Msa0622040:intron 55.0%
CCCACAGAACCCTTCTTTGC+CGG + chr4_2:74407069-74407088 None:intergenic 55.0%
CCGGCAAAGAAGGGTTCTGT+GGG - chr4_2:74407066-74407085 Msa0622040:intron 55.0%
CGGCAAAGAAGGGTTCTGTG+GGG - chr4_2:74407067-74407086 Msa0622040:intron 55.0%
GGCAAAGAAGGGTTCTGTGG+GGG - chr4_2:74407068-74407087 Msa0622040:intron 55.0%
GGTTCTGTGGGGGTCAACAA+GGG - chr4_2:74407078-74407097 Msa0622040:intron 55.0%
CAATCCATGTGCCAGGAACC+AGG - chr4_2:74407757-74407776 Msa0622040:CDS 55.0%
GTACAAAGGCCCTCCCTTCT+TGG - chr4_2:74407905-74407924 Msa0622040:intron 55.0%
CTTGTGAGAGCCAAGAAGGG+AGG + chr4_2:74407918-74407937 None:intergenic 55.0%
TCCGGTCGAAGGTTCAAACC+TGG - chr4_2:74408086-74408105 Msa0622040:intron 55.0%
CCCAGGTTTGAACCTTCGAC+CGG + chr4_2:74408090-74408109 None:intergenic 55.0%
CCGGTCGAAGGTTCAAACCT+GGG - chr4_2:74408087-74408106 Msa0622040:intron 55.0%
GGTTCAAACCTGGGTCAAGC+AGG - chr4_2:74408096-74408115 Msa0622040:intron 55.0%
CTTCATAGCCTGCTTGACCC+AGG + chr4_2:74408107-74408126 None:intergenic 55.0%
ATTGGGAGCTCACTGCAGCA+TGG - chr4_2:74408538-74408557 Msa0622040:intron 55.0%
CGCCACCAGATTGCTGCTCT+TGG - chr4_2:74399884-74399903 Msa0622040:three_prime_UTR 60.0%
GGGAGCCAAGAGCAGCAATC+TGG + chr4_2:74399892-74399911 None:intergenic 60.0%
GCTGTTGCTCCAGATCTCCG+TGG - chr4_2:74399923-74399942 Msa0622040:three_prime_UTR 60.0%
TCGCCGTAACCACGGAGATC+TGG + chr4_2:74399935-74399954 None:intergenic 60.0%
!! CATCGGTGTCGCCGTAACCA+CGG + chr4_2:74399943-74399962 None:intergenic 60.0%
GTACAATGCCCCTCCCTTCC+TGG - chr4_2:74401120-74401139 Msa0622040:intron 60.0%
TTGCGAGAGCCAGGAAGGGA+GGG + chr4_2:74401132-74401151 None:intergenic 60.0%
GACCGAGAGGGTTGGAACCT+TGG + chr4_2:74401326-74401345 None:intergenic 60.0%
GGTTCCAACCCTCTCGGTCA+TGG - chr4_2:74401327-74401346 Msa0622040:intron 60.0%
ATTGGGAGCTCACGGCAGCA+TGG - chr4_2:74401820-74401839 Msa0622040:intron 60.0%
CAACAACCGAGAAGCTGCCG+AGG - chr4_2:74402001-74402020 Msa0622040:intron 60.0%
AGGCCATGTAGGGCTGAGAG+TGG - chr4_2:74402433-74402452 Msa0622040:intron 60.0%
ACGCCACTCTCAGCCCTACA+TGG + chr4_2:74402439-74402458 None:intergenic 60.0%
CTCTTGGCGCCACCAGATTG+CGG - chr4_2:74399877-74399896 Msa0622040:three_prime_UTR 60.0%
GAGCAACAGCACGGTAACCG+AGG + chr4_2:74403629-74403648 None:intergenic 60.0%
GCTGTTGCTCCAGATCTCCG+TGG - chr4_2:74399923-74399942 Msa0622040:three_prime_UTR 60.0%
CACCCCAGTCATGAGCAACG+AGG + chr4_2:74403770-74403789 None:intergenic 60.0%
GGGTTCTGTGGGGGTCAACA+AGG - chr4_2:74407077-74407096 Msa0622040:intron 60.0%
GAGCTCACTGCAGCATGGAC+TGG - chr4_2:74408543-74408562 Msa0622040:intron 60.0%
! TTGGGCAGGATTGGTGGCCC+AGG + chr4_2:74401068-74401087 None:intergenic 65.0%
TGCGAGAGCCAGGAAGGGAG+GGG + chr4_2:74401131-74401150 None:intergenic 65.0%
CTTGCGAGAGCCAGGAAGGG+AGG + chr4_2:74401133-74401152 None:intergenic 65.0%
GAGCTCACGGCAGCATGGAC+CGG - chr4_2:74401825-74401844 Msa0622040:intron 65.0%
CGCCACCAGATTGCGGCTCT+CGG - chr4_2:74403600-74403619 Msa0622040:intron 65.0%
AGCCGAGAGCCGCAATCTGG+TGG + chr4_2:74403605-74403624 None:intergenic 65.0%
ATTGCGGCTCTCGGCTCCCT+CGG - chr4_2:74403609-74403628 Msa0622040:intron 65.0%
CAAGTGCAGGGCCAGCCCAA+GGG + chr4_2:74408267-74408286 None:intergenic 65.0%
ACAAGTGCAGGGCCAGCCCA+AGG + chr4_2:74408268-74408287 None:intergenic 65.0%
GGGAGCCGAGAGCCGCAATC+TGG + chr4_2:74403608-74403627 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 74399761 74409032 74399761 ID=Msa0622040;Name=Msa0622040
chr4_2 mRNA 74399761 74409032 74399761 ID=Msa0622040-mRNA-1;Parent=Msa0622040;Name=Msa0622040-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.42|0.25|1|0.57|0.37|8|250|599
chr4_2 exon 74399761 74400257 74399761 ID=Msa0622040-mRNA-1:exon:22433;Parent=Msa0622040-mRNA-1
chr4_2 exon 74400777 74400964 74400777 ID=Msa0622040-mRNA-1:exon:22432;Parent=Msa0622040-mRNA-1
chr4_2 exon 74404849 74405072 74404849 ID=Msa0622040-mRNA-1:exon:22431;Parent=Msa0622040-mRNA-1
chr4_2 exon 74405127 74405368 74405127 ID=Msa0622040-mRNA-1:exon:22430;Parent=Msa0622040-mRNA-1
chr4_2 exon 74406736 74406975 74406736 ID=Msa0622040-mRNA-1:exon:22429;Parent=Msa0622040-mRNA-1
chr4_2 exon 74407562 74407806 74407562 ID=Msa0622040-mRNA-1:exon:22428;Parent=Msa0622040-mRNA-1
chr4_2 exon 74408565 74408734 74408565 ID=Msa0622040-mRNA-1:exon:22427;Parent=Msa0622040-mRNA-1
chr4_2 exon 74408789 74409032 74408789 ID=Msa0622040-mRNA-1:exon:22426;Parent=Msa0622040-mRNA-1
chr4_2 CDS 74408789 74409032 74408789 ID=Msa0622040-mRNA-1:cds;Parent=Msa0622040-mRNA-1
chr4_2 CDS 74408565 74408734 74408565 ID=Msa0622040-mRNA-1:cds;Parent=Msa0622040-mRNA-1
chr4_2 CDS 74407562 74407806 74407562 ID=Msa0622040-mRNA-1:cds;Parent=Msa0622040-mRNA-1
chr4_2 CDS 74406736 74406975 74406736 ID=Msa0622040-mRNA-1:cds;Parent=Msa0622040-mRNA-1
chr4_2 CDS 74405127 74405368 74405127 ID=Msa0622040-mRNA-1:cds;Parent=Msa0622040-mRNA-1
chr4_2 CDS 74404849 74405072 74404849 ID=Msa0622040-mRNA-1:cds;Parent=Msa0622040-mRNA-1
chr4_2 CDS 74400777 74400964 74400777 ID=Msa0622040-mRNA-1:cds;Parent=Msa0622040-mRNA-1
chr4_2 CDS 74400011 74400257 74400011 ID=Msa0622040-mRNA-1:cds;Parent=Msa0622040-mRNA-1
chr4_2 three_prime_UTR 74399761 74400010 74399761 ID=Msa0622040-mRNA-1:three_prime_utr;Parent=Msa0622040-mRNA-1
Gene Sequence

>Msa0622040

ATGGAAGGAATAGAACACAGAACAGTGGAAGTGAATGGCATCAAAATGCATATTGCAGAGAAAGGAAAAGAAGGACCTGTTGTCCTGTTCCTTCACGGCTTTCCTGAACTCTGGTACTCTTGGCGCCACCAGATTGCTGCTCTTGGCTCCCTCGGTTACTGTGCTGTTGCTCCAGATCTCCGTGGTTACGGCGACACCGATGCTCCAGCTTCCATTAGTAGTTACACAATCTTCCATTTGGTGGCTCATGATTGGGGTGCCATCATTGGTTGGTATCTTTGTTTGTTTCGCCCTGAAAGAATCAAAGCCTATGTTTGTCTCAGTGTTCCGTATTTACCCAGAAATCCAAAAGTGAAACCTGTTGATGGAATGCGAGCTGTGTATGGTGATGATTATTATATCTGCAGATTCCAGGAACCCGGGAAAATGGAAGCTGAAATTGCTAAAGGTAGTCCAGAACTGTTGATCAAGGCCATGCTTACAAGTCGTAATCCTGGGCCACCAATCCTGCCCAAAGAAGGCATATTATCTCATCCCAGTGTTTCAAGTACAATGCCCCTCCCTTCCTGGCTCTCGCAAGAAGATGTCACTTGCTATGCTTCCAAATTTGAAAAGACAGGATTTAGTGGTGGTCTTAACTACTACAGAAACTTCAACTTAAATTGGGAGCTCACGGCAGCATGGACCGGAGCACAAATTAAAGTACCAGTGAAGTTCATCATAGGTGATCTGGATTTAGTTTACACTTCTTTTGGCACCAAACAATACATCGAGAGCGGTGGTTTCAAGAAAGATGTGCCAAATTTGGAGGAAGTGGTTATACAGAAAGGTGTGGCTCACTTCAACAACCGAGAAGCTGCCGAGGAAATCAGTAATCACATTTATGATTTTATCAAGAAATCGCCTTCACTTCACAAACTCAAACACATACACATCACAAACAAAAAAGAGATGGAAGGAGTAGAGCACAGAACAGTGGAAGTAAATGGAATCAAAATGCATATTGCTGAGAAAGGAAAAGAAGGACCTGTTGTCCTGTTCCTTCACGGCTTTCCTGAACTTTGGTACTCTTGGCGCCACCAGATTGCGGCTCTCGGCTCCCTCGGTTACCGTGCTGTTGCTCCAGATCTCCGTGGATACGGTGATATCGTTGCTCTCATCGACTCACTCGGCGTTGACCAAGTCTTCCTCGTTGCTCATGACTGGGGTGCCATGATTGGTTGGTATCTTTGTTTGTTTCGCCCTGAAAGAATCAAAGCTTATGTTTGTCTCAGTGTGCCGTATTTACCCAGAAACCCAAAAGTGAAACCTGTTGATGGCATGCGAGCTTTGTTTGGTGATGATTACTATATCTGCAGATTCCAGAACATGCTTACAAGTAGGAATTCTGGGCCACCAATCCTACCAAAAGAAGGCGTGATACCTAATCCACATGCTTCAAGTACAAAGGCCCTCCCTTCTTGGCTCTCACAAGAAGATATCACTTACTATGCTTCTAAATTTGAAAAGACAGGATTCAGTGGTGCCCTTAACTACTATAGAAATCTCAACTTAAATTGGGAGCTCACTGCAGCATGGACTGGAGCAAAAATTAAGGTGCCAGTGACATTCATCACAGGTGATTTAGATGCAGTTTACACTTCATTTGGTACAAAGCAATACATCGAGAGTGGAGGTTTTAAGAAAGATGTGCCAAATTTGGAGGAAGTTGTTATACAGGAAGGTGTGGCTCACTTCAACAACCAAGAAGCTGCTGAGGATATCAGCAATCACATTTACGATTTTATCAAGAAATTCTGA
Protein sequence

>Msa0622040

MEGIEHRTVEVNGIKMHIAEKGKEGPVVLFLHGFPELWYSWRHQIAALGSLGYCAVAPDLRGYGDTDAPASISSYTIFHLVAHDWGAIIGWYLCLFRPERIKAYVCLSVPYLPRNPKVKPVDGMRAVYGDDYYICRFQEPGKMEAEIAKGSPELLIKAMLTSRNPGPPILPKEGILSHPSVSSTMPLPSWLSQEDVTCYASKFEKTGFSGGLNYYRNFNLNWELTAAWTGAQIKVPVKFIIGDLDLVYTSFGTKQYIESGGFKKDVPNLEEVVIQKGVAHFNNREAAEEISNHIYDFIKKSPSLHKLKHIHITNKKEMEGVEHRTVEVNGIKMHIAEKGKEGPVVLFLHGFPELWYSWRHQIAALGSLGYRAVAPDLRGYGDIVALIDSLGVDQVFLVAHDWGAMIGWYLCLFRPERIKAYVCLSVPYLPRNPKVKPVDGMRALFGDDYYICRFQNMLTSRNSGPPILPKEGVIPNPHASSTKALPSWLSQEDITYYASKFEKTGFSGALNYYRNLNLNWELTAAWTGAKIKVPVTFITGDLDAVYTSFGTKQYIESGGFKKDVPNLEEVVIQEGVAHFNNQEAAEDISNHIYDFIKKF*