Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0139720 | sp|Q9FGL2|TIP23_ARATH | 79.352 | 247 | 50 | 1 | 1 | 246 | 1 | 247 | 4.33e-136 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0139720 | G7JXC6 | 98.374 | 246 | 4 | 0 | 1 | 246 | 1 | 246 | 2.49e-163 | 461 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005350 | Msa0139720 | -0.833464 | 5.255032e-56 | -8.615850e-47 |
| Msa0006700 | Msa0139720 | -0.840162 | 1.026805e-57 | -8.615850e-47 |
| Msa0008850 | Msa0139720 | -0.806461 | 8.135569e-50 | -8.615850e-47 |
| Msa0012780 | Msa0139720 | 0.801318 | 9.526163e-49 | -8.615850e-47 |
| Msa0012820 | Msa0139720 | 0.827441 | 1.561509e-54 | -8.615850e-47 |
| Msa0020630 | Msa0139720 | -0.832786 | 7.747498e-56 | -8.615850e-47 |
| Msa0034310 | Msa0139720 | 0.821737 | 3.444190e-53 | -8.615850e-47 |
| Msa0036230 | Msa0139720 | 0.819841 | 9.396653e-53 | -8.615850e-47 |
| Msa0036580 | Msa0139720 | 0.813556 | 2.411053e-51 | -8.615850e-47 |
| Msa0038310 | Msa0139720 | -0.818580 | 1.819688e-52 | -8.615850e-47 |
| Msa0043940 | Msa0139720 | -0.821124 | 4.771390e-53 | -8.615850e-47 |
| Msa0048950 | Msa0139720 | 0.818552 | 1.846801e-52 | -8.615850e-47 |
| Msa0049400 | Msa0139720 | 0.830432 | 2.946669e-55 | -8.615850e-47 |
| Msa0051100 | Msa0139720 | -0.823051 | 1.705745e-53 | -8.615850e-47 |
| Msa0053900 | Msa0139720 | -0.841577 | 4.366182e-58 | -8.615850e-47 |
| Msa0055280 | Msa0139720 | -0.851047 | 1.144070e-60 | -8.615850e-47 |
| Msa0061600 | Msa0139720 | 0.859493 | 3.980941e-63 | -8.615850e-47 |
| Msa0068410 | Msa0139720 | -0.829807 | 4.185656e-55 | -8.615850e-47 |
| Msa0074080 | Msa0139720 | -0.812785 | 3.558958e-51 | -8.615850e-47 |
| Msa0078430 | Msa0139720 | -0.818410 | 1.988965e-52 | -8.615850e-47 |
| Msa0079770 | Msa0139720 | -0.802720 | 4.907248e-49 | -8.615850e-47 |
| Msa0081310 | Msa0139720 | 0.809642 | 1.710525e-50 | -8.615850e-47 |
| Msa0086170 | Msa0139720 | 0.809609 | 1.738469e-50 | -8.615850e-47 |
| Msa0092710 | Msa0139720 | -0.816357 | 5.766348e-52 | -8.615850e-47 |
| Msa0099730 | Msa0139720 | -0.837932 | 3.880758e-57 | -8.615850e-47 |
| Msa0101060 | Msa0139720 | -0.853599 | 2.148399e-61 | -8.615850e-47 |
| Msa0106120 | Msa0139720 | 0.837640 | 4.614135e-57 | -8.615850e-47 |
| Msa0106130 | Msa0139720 | 0.853930 | 1.724861e-61 | -8.615850e-47 |
| Msa0114250 | Msa0139720 | -0.807466 | 4.984962e-50 | -8.615850e-47 |
| Msa0126090 | Msa0139720 | -0.800244 | 1.578412e-48 | -8.615850e-47 |
| Msa0127440 | Msa0139720 | -0.817678 | 2.911584e-52 | -8.615850e-47 |
| Msa0139270 | Msa0139720 | 0.802723 | 4.899909e-49 | -8.615850e-47 |
| Msa0139460 | Msa0139720 | 0.802438 | 5.609270e-49 | -8.615850e-47 |
| Msa0139720 | Msa0148360 | -0.844850 | 5.855427e-59 | -8.615850e-47 |
| Msa0139720 | Msa0152740 | 0.837108 | 6.313935e-57 | -8.615850e-47 |
| Msa0139720 | Msa0156650 | 0.803323 | 3.683132e-49 | -8.615850e-47 |
| Msa0139720 | Msa0159750 | -0.830866 | 2.307240e-55 | -8.615850e-47 |
| Msa0139720 | Msa0164660 | -0.831324 | 1.780775e-55 | -8.615850e-47 |
| Msa0139720 | Msa0168640 | 0.814933 | 1.196961e-51 | -8.615850e-47 |
| Msa0139720 | Msa0171020 | -0.803315 | 3.696379e-49 | -8.615850e-47 |
| Msa0139720 | Msa0173620 | 0.814778 | 1.295481e-51 | -8.615850e-47 |
| Msa0139720 | Msa0176620 | 0.825287 | 5.088750e-54 | -8.615850e-47 |
| Msa0139720 | Msa0182640 | -0.829090 | 6.252150e-55 | -8.615850e-47 |
| Msa0139720 | Msa0182930 | -0.810700 | 1.011602e-50 | -8.615850e-47 |
| Msa0139720 | Msa0197750 | 0.903911 | 2.124667e-79 | -8.615850e-47 |
| Msa0139720 | Msa0213080 | -0.801713 | 7.909191e-49 | -8.615850e-47 |
| Msa0139720 | Msa0216210 | -0.803747 | 3.008073e-49 | -8.615850e-47 |
| Msa0139720 | Msa0219210 | 0.804242 | 2.372699e-49 | -8.615850e-47 |
| Msa0139720 | Msa0223100 | -0.821107 | 4.813112e-53 | -8.615850e-47 |
| Msa0139720 | Msa0223290 | -0.807283 | 5.452919e-50 | -8.615850e-47 |
| Msa0139720 | Msa0235550 | -0.808948 | 2.409618e-50 | -8.615850e-47 |
| Msa0139720 | Msa0242700 | 0.819083 | 1.398885e-52 | -8.615850e-47 |
| Msa0139720 | Msa0260180 | -0.810184 | 1.307733e-50 | -8.615850e-47 |
| Msa0139720 | Msa0264940 | 0.815672 | 8.197804e-52 | -8.615850e-47 |
| Msa0139720 | Msa0265210 | -0.800535 | 1.376906e-48 | -8.615850e-47 |
| Msa0139720 | Msa0265580 | -0.804950 | 1.689229e-49 | -8.615850e-47 |
| Msa0139720 | Msa0271040 | -0.804205 | 2.415142e-49 | -8.615850e-47 |
| Msa0139720 | Msa0274520 | -0.805431 | 1.339461e-49 | -8.615850e-47 |
| Msa0139720 | Msa0277280 | 0.900936 | 4.443379e-78 | -8.615850e-47 |
| Msa0139720 | Msa0282170 | -0.854026 | 1.618944e-61 | -8.615850e-47 |
| Msa0139720 | Msa0284870 | -0.803890 | 2.808807e-49 | -8.615850e-47 |
| Msa0139720 | Msa0288240 | -0.823658 | 1.230011e-53 | -8.615850e-47 |
| Msa0139720 | Msa0292180 | -0.804417 | 2.182474e-49 | -8.615850e-47 |
| Msa0139720 | Msa0298270 | 0.802958 | 4.381424e-49 | -8.615850e-47 |
| Msa0139720 | Msa0301180 | -0.800109 | 1.681544e-48 | -8.615850e-47 |
| Msa0139720 | Msa0302990 | 0.815567 | 8.654979e-52 | -8.615850e-47 |
| Msa0139720 | Msa0306130 | -0.829496 | 4.982591e-55 | -8.615850e-47 |
| Msa0139720 | Msa0309350 | -0.808540 | 2.945856e-50 | -8.615850e-47 |
| Msa0139720 | Msa0311810 | -0.800367 | 1.490249e-48 | -8.615850e-47 |
| Msa0139720 | Msa0320540 | -0.801334 | 9.455757e-49 | -8.615850e-47 |
| Msa0139720 | Msa0326670 | -0.820634 | 6.184497e-53 | -8.615850e-47 |
| Msa0139720 | Msa0354390 | -0.812353 | 4.424036e-51 | -8.615850e-47 |
| Msa0139720 | Msa0357380 | -0.810771 | 9.767594e-51 | -8.615850e-47 |
| Msa0139720 | Msa0371540 | -0.801230 | 9.930665e-49 | -8.615850e-47 |
| Msa0139720 | Msa0371570 | -0.805067 | 1.596431e-49 | -8.615850e-47 |
| Msa0139720 | Msa0375080 | 0.823951 | 1.050572e-53 | -8.615850e-47 |
| Msa0139720 | Msa0389060 | -0.822326 | 2.515108e-53 | -8.615850e-47 |
| Msa0139720 | Msa0401340 | -0.814199 | 1.739886e-51 | -8.615850e-47 |
| Msa0139720 | Msa0405660 | 0.815679 | 8.168717e-52 | -8.615850e-47 |
| Msa0139720 | Msa0418000 | -0.841928 | 3.527790e-58 | -8.615850e-47 |
| Msa0139720 | Msa0419620 | 0.822607 | 2.164445e-53 | -8.615850e-47 |
| Msa0139720 | Msa0419990 | -0.836772 | 7.692937e-57 | -8.615850e-47 |
| Msa0139720 | Msa0423680 | 0.878944 | 1.863063e-69 | -8.615850e-47 |
| Msa0139720 | Msa0427520 | 0.814193 | 1.744725e-51 | -8.615850e-47 |
| Msa0139720 | Msa0431520 | -0.816882 | 4.397602e-52 | -8.615850e-47 |
| Msa0139720 | Msa0431830 | -0.826431 | 2.723945e-54 | -8.615850e-47 |
| Msa0139720 | Msa0448120 | -0.806254 | 8.993107e-50 | -8.615850e-47 |
| Msa0139720 | Msa0455260 | -0.805842 | 1.097902e-49 | -8.615850e-47 |
| Msa0139720 | Msa0457290 | -0.803783 | 2.956555e-49 | -8.615850e-47 |
| Msa0139720 | Msa0462590 | -0.809030 | 2.314458e-50 | -8.615850e-47 |
| Msa0139720 | Msa0465670 | 0.823614 | 1.260018e-53 | -8.615850e-47 |
| Msa0139720 | Msa0465930 | -0.831042 | 2.088509e-55 | -8.615850e-47 |
| Msa0139720 | Msa0465970 | -0.831571 | 1.548285e-55 | -8.615850e-47 |
| Msa0139720 | Msa0466060 | -0.802699 | 4.957065e-49 | -8.615850e-47 |
| Msa0139720 | Msa0469550 | 0.844519 | 7.191317e-59 | -8.615850e-47 |
| Msa0139720 | Msa0470370 | 0.866169 | 3.470478e-65 | -8.615850e-47 |
| Msa0139720 | Msa0505660 | -0.805909 | 1.063288e-49 | -8.615850e-47 |
| Msa0139720 | Msa0511720 | 0.830525 | 2.795951e-55 | -8.615850e-47 |
| Msa0139720 | Msa0515260 | 0.847890 | 8.685764e-60 | -8.615850e-47 |
| Msa0139720 | Msa0517340 | -0.803079 | 4.137286e-49 | -8.615850e-47 |
| Msa0139720 | Msa0530950 | -0.819430 | 1.166344e-52 | -8.615850e-47 |
| Msa0139720 | Msa0531990 | 0.812739 | 3.644180e-51 | -8.615850e-47 |
| Msa0139720 | Msa0532100 | 0.816901 | 4.353899e-52 | -8.615850e-47 |
| Msa0139720 | Msa0546740 | -0.820684 | 6.021017e-53 | -8.615850e-47 |
| Msa0139720 | Msa0548820 | 0.809351 | 1.975331e-50 | -8.615850e-47 |
| Msa0139720 | Msa0548970 | 0.828549 | 8.451791e-55 | -8.615850e-47 |
| Msa0139720 | Msa0565490 | -0.810297 | 1.236271e-50 | -8.615850e-47 |
| Msa0139720 | Msa0568610 | -0.816051 | 6.747740e-52 | -8.615850e-47 |
| Msa0139720 | Msa0575990 | 0.831924 | 1.267144e-55 | -8.615850e-47 |
| Msa0139720 | Msa0576100 | 0.832223 | 1.068362e-55 | -8.615850e-47 |
| Msa0139720 | Msa0579340 | -0.849032 | 4.194420e-60 | -8.615850e-47 |
| Msa0139720 | Msa0599600 | 0.801378 | 9.263841e-49 | -8.615850e-47 |
| Msa0139720 | Msa0602530 | 0.810310 | 1.228506e-50 | -8.615850e-47 |
| Msa0139720 | Msa0603800 | 0.836279 | 1.026984e-56 | -8.615850e-47 |
| Msa0139720 | Msa0605460 | 0.873522 | 1.377302e-67 | -8.615850e-47 |
| Msa0139720 | Msa0605470 | 0.803331 | 3.667941e-49 | -8.615850e-47 |
| Msa0139720 | Msa0618290 | -0.802674 | 5.014468e-49 | -8.615850e-47 |
| Msa0139720 | Msa0618520 | -0.803045 | 4.204179e-49 | -8.615850e-47 |
| Msa0139720 | Msa0620640 | -0.857205 | 1.912537e-62 | -8.615850e-47 |
| Msa0139720 | Msa0621890 | -0.820057 | 8.386565e-53 | -8.615850e-47 |
| Msa0139720 | Msa0622040 | 0.805919 | 1.057950e-49 | -8.615850e-47 |
| Msa0139720 | Msa0622340 | -0.812275 | 4.601822e-51 | -8.615850e-47 |
| Msa0139720 | Msa0623170 | -0.812905 | 3.350552e-51 | -8.615850e-47 |
| Msa0139720 | Msa0628100 | -0.832881 | 7.337980e-56 | -8.615850e-47 |
| Msa0139720 | Msa0645100 | 0.847959 | 8.312549e-60 | -8.615850e-47 |
| Msa0139720 | Msa0646040 | 0.900174 | 9.533483e-78 | -8.615850e-47 |
| Msa0139720 | Msa0650650 | -0.844900 | 5.676191e-59 | -8.615850e-47 |
| Msa0139720 | Msa0650740 | -0.843393 | 1.440421e-58 | -8.615850e-47 |
| Msa0139720 | Msa0654060 | -0.804711 | 1.894427e-49 | -8.615850e-47 |
| Msa0139720 | Msa0655660 | 0.823212 | 1.563729e-53 | -8.615850e-47 |
| Msa0139720 | Msa0656270 | -0.814867 | 1.238139e-51 | -8.615850e-47 |
| Msa0139720 | Msa0665910 | 0.848742 | 5.049202e-60 | -8.615850e-47 |
| Msa0139720 | Msa0670220 | 0.837693 | 4.470585e-57 | -8.615850e-47 |
| Msa0139720 | Msa0684590 | 0.835349 | 1.767235e-56 | -8.615850e-47 |
| Msa0139720 | Msa0684600 | 0.846620 | 1.936794e-59 | -8.615850e-47 |
| Msa0139720 | Msa0684720 | 0.822653 | 2.110988e-53 | -8.615850e-47 |
| Msa0139720 | Msa0700070 | -0.812989 | 3.212125e-51 | -8.615850e-47 |
| Msa0139720 | Msa0701770 | -0.842559 | 2.401882e-58 | -8.615850e-47 |
| Msa0139720 | Msa0714600 | -0.846021 | 2.820702e-59 | -8.615850e-47 |
| Msa0139720 | Msa0721150 | -0.815321 | 9.815633e-52 | -8.615850e-47 |
| Msa0139720 | Msa0724050 | -0.804244 | 2.371363e-49 | -8.615850e-47 |
| Msa0139720 | Msa0728610 | 0.801885 | 7.290046e-49 | -8.615850e-47 |
| Msa0139720 | Msa0731710 | -0.853054 | 3.079111e-61 | -8.615850e-47 |
| Msa0139720 | Msa0735280 | 0.836248 | 1.045683e-56 | -8.615850e-47 |
| Msa0139720 | Msa0739570 | -0.824175 | 9.306214e-54 | -8.615850e-47 |
| Msa0139720 | Msa0761760 | -0.819166 | 1.339249e-52 | -8.615850e-47 |
| Msa0139720 | Msa0763880 | -0.801567 | 8.473705e-49 | -8.615850e-47 |
| Msa0139720 | Msa0782330 | -0.821832 | 3.273681e-53 | -8.615850e-47 |
| Msa0139720 | Msa0792790 | 0.841359 | 4.985257e-58 | -8.615850e-47 |
| Msa0139720 | Msa0793060 | -0.801565 | 8.481129e-49 | -8.615850e-47 |
| Msa0139720 | Msa0796430 | 0.991520 | 4.386399e-188 | -8.615850e-47 |
| Msa0139720 | Msa0801100 | -0.800868 | 1.177904e-48 | -8.615850e-47 |
| Msa0139720 | Msa0804060 | -0.804745 | 1.864253e-49 | -8.615850e-47 |
| Msa0139720 | Msa0811000 | -0.833804 | 4.321381e-56 | -8.615850e-47 |
| Msa0139720 | Msa0828570 | -0.812878 | 3.396098e-51 | -8.615850e-47 |
| Msa0139720 | Msa0834270 | 0.988821 | 1.512114e-175 | -8.615850e-47 |
| Msa0139720 | Msa0842240 | -0.822249 | 2.620614e-53 | -8.615850e-47 |
| Msa0139720 | Msa0860270 | -0.834590 | 2.744965e-56 | -8.615850e-47 |
| Msa0139720 | Msa0862020 | -0.813516 | 2.460458e-51 | -8.615850e-47 |
| Msa0139720 | Msa0883640 | 0.838654 | 2.529691e-57 | -8.615850e-47 |
| Msa0139720 | Msa0887070 | -0.808882 | 2.489270e-50 | -8.615850e-47 |
| Msa0139720 | Msa0903730 | -0.834878 | 2.322964e-56 | -8.615850e-47 |
| Msa0139720 | Msa0910830 | 0.830148 | 3.456327e-55 | -8.615850e-47 |
| Msa0139720 | Msa0926800 | -0.821539 | 3.825993e-53 | -8.615850e-47 |
| Msa0139720 | Msa0948050 | 0.804034 | 2.621735e-49 | -8.615850e-47 |
| Msa0139720 | Msa0951710 | -0.805729 | 1.160008e-49 | -8.615850e-47 |
| Msa0139720 | Msa0951720 | -0.826045 | 3.364134e-54 | -8.615850e-47 |
| Msa0139720 | Msa0958020 | -0.804681 | 1.922464e-49 | -8.615850e-47 |
| Msa0139720 | Msa0960090 | 0.839077 | 1.965335e-57 | -8.615850e-47 |
| Msa0139720 | Msa0965520 | -0.812510 | 4.087652e-51 | -8.615850e-47 |
| Msa0139720 | Msa0967820 | 0.805326 | 1.409102e-49 | -8.615850e-47 |
| Msa0139720 | Msa0971860 | -0.801806 | 7.567753e-49 | -8.615850e-47 |
| Msa0139720 | Msa0973230 | -0.816230 | 6.156365e-52 | -8.615850e-47 |
| Msa0139720 | Msa0981010 | -0.872559 | 2.898287e-67 | -8.615850e-47 |
| Msa0139720 | Msa0985700 | 0.839092 | 1.948788e-57 | -8.615850e-47 |
| Msa0139720 | Msa1002040 | -0.826165 | 3.150397e-54 | -8.615850e-47 |
| Msa0139720 | Msa1002990 | 0.811906 | 5.538693e-51 | -8.615850e-47 |
| Msa0139720 | Msa1004210 | -0.804220 | 2.398697e-49 | -8.615850e-47 |
| Msa0139720 | Msa1006940 | 0.854448 | 1.222694e-61 | -8.615850e-47 |
| Msa0139720 | Msa1032350 | -0.810948 | 8.942974e-51 | -8.615850e-47 |
| Msa0139720 | Msa1037060 | 0.821843 | 3.254304e-53 | -8.615850e-47 |
| Msa0139720 | Msa1038320 | -0.816813 | 4.556757e-52 | -8.615850e-47 |
| Msa0139720 | Msa1046610 | -0.800904 | 1.157965e-48 | -8.615850e-47 |
| Msa0139720 | Msa1072350 | -0.812306 | 4.531511e-51 | -8.615850e-47 |
| Msa0139720 | Msa1079610 | -0.814771 | 1.300206e-51 | -8.615850e-47 |
| Msa0139720 | Msa1079730 | 0.835954 | 1.241841e-56 | -8.615850e-47 |
| Msa0139720 | Msa1081600 | -0.810273 | 1.250982e-50 | -8.615850e-47 |
| Msa0139720 | Msa1082820 | 0.811975 | 5.349512e-51 | -8.615850e-47 |
| Msa0139720 | Msa1095480 | -0.808365 | 3.210334e-50 | -8.615850e-47 |
| Msa0139720 | Msa1109890 | 0.830042 | 3.669337e-55 | -8.615850e-47 |
| Msa0139720 | Msa1112730 | 0.817176 | 3.777983e-52 | -8.615850e-47 |
| Msa0139720 | Msa1118140 | -0.810401 | 1.174190e-50 | -8.615850e-47 |
| Msa0139720 | Msa1132560 | 0.998240 | 1.230775e-259 | -8.615850e-47 |
| Msa0139720 | Msa1142500 | -0.813892 | 2.033504e-51 | -8.615850e-47 |
| Msa0139720 | Msa1142860 | 0.812727 | 3.666077e-51 | -8.615850e-47 |
| Msa0139720 | Msa1143240 | 0.804596 | 2.002699e-49 | -8.615850e-47 |
| Msa0139720 | Msa1159360 | -0.810738 | 9.929643e-51 | -8.615850e-47 |
| Msa0139720 | Msa1164800 | 0.824024 | 1.009916e-53 | -8.615850e-47 |
| Msa0139720 | Msa1166370 | -0.804029 | 2.627579e-49 | -8.615850e-47 |
| Msa0139720 | Msa1168040 | 0.830117 | 3.517722e-55 | -8.615850e-47 |
| Msa0139720 | Msa1171060 | 0.803312 | 3.701986e-49 | -8.615850e-47 |
| Msa0139720 | Msa1175600 | 0.823970 | 1.039905e-53 | -8.615850e-47 |
| Msa0139720 | Msa1178160 | -0.810342 | 1.209117e-50 | -8.615850e-47 |
| Msa0139720 | Msa1182830 | -0.821943 | 3.086028e-53 | -8.615850e-47 |
| Msa0139720 | Msa1207480 | 0.867492 | 1.315235e-65 | -8.615850e-47 |
| Msa0139720 | Msa1216600 | 0.825465 | 4.619695e-54 | -8.615850e-47 |
| Msa0139720 | Msa1217810 | -0.828353 | 9.426950e-55 | -8.615850e-47 |
| Msa0139720 | Msa1218650 | -0.812873 | 3.405823e-51 | -8.615850e-47 |
| Msa0139720 | Msa1221570 | 0.803030 | 4.234709e-49 | -8.615850e-47 |
| Msa0139720 | Msa1222030 | 0.829992 | 3.774294e-55 | -8.615850e-47 |
| Msa0139720 | Msa1223160 | 0.804846 | 1.775322e-49 | -8.615850e-47 |
| Msa0139720 | Msa1238480 | -0.812456 | 4.202027e-51 | -8.615850e-47 |
| Msa0139720 | Msa1241820 | -0.810629 | 1.048139e-50 | -8.615850e-47 |
| Msa0139720 | Msa1257030 | 0.806717 | 7.181951e-50 | -8.615850e-47 |
| Msa0139720 | Msa1258280 | -0.805000 | 1.648992e-49 | -8.615850e-47 |
| Msa0139720 | Msa1265960 | -0.814293 | 1.658812e-51 | -8.615850e-47 |
| Msa0139720 | Msa1282920 | -0.811901 | 5.550809e-51 | -8.615850e-47 |
| Msa0139720 | Msa1298290 | -0.814517 | 1.479677e-51 | -8.615850e-47 |
| Msa0139720 | Msa1305750 | -0.800869 | 1.177266e-48 | -8.615850e-47 |
| Msa0139720 | Msa1306190 | -0.819700 | 1.011784e-52 | -8.615850e-47 |
| Msa0139720 | Msa1306200 | -0.853431 | 2.400486e-61 | -8.615850e-47 |
| Msa0139720 | Msa1314710 | 0.819392 | 1.189843e-52 | -8.615850e-47 |
| Msa0139720 | Msa1317710 | -0.814310 | 1.644558e-51 | -8.615850e-47 |
| Msa0139720 | Msa1322190 | -0.801301 | 9.605327e-49 | -8.615850e-47 |
| Msa0139720 | Msa1323030 | 0.805132 | 1.547232e-49 | -8.615850e-47 |
| Msa0139720 | Msa1323160 | 0.869623 | 2.694673e-66 | -8.615850e-47 |
| Msa0139720 | Msa1335970 | 0.826187 | 3.113462e-54 | -8.615850e-47 |
| Msa0139720 | Msa1355260 | -0.810207 | 1.292815e-50 | -8.615850e-47 |
| Msa0139720 | Msa1357490 | 0.830108 | 3.535252e-55 | -8.615850e-47 |
| Msa0139720 | Msa1360380 | -0.800900 | 1.160059e-48 | -8.615850e-47 |
| Msa0139720 | Msa1361190 | -0.822979 | 1.773138e-53 | -8.615850e-47 |
| Msa0139720 | Msa1370930 | 0.810509 | 1.112440e-50 | -8.615850e-47 |
| Msa0139720 | Msa1380490 | 0.855657 | 5.445367e-62 | -8.615850e-47 |
| Msa0139720 | Msa1386260 | 0.814850 | 1.248515e-51 | -8.615850e-47 |
| Msa0139720 | Msa1393440 | 0.831001 | 2.137898e-55 | -8.615850e-47 |
| Msa0139720 | Msa1395690 | 0.829161 | 6.009744e-55 | -8.615850e-47 |
| Msa0139720 | Msa1397340 | -0.804927 | 1.707694e-49 | -8.615850e-47 |
| Msa0139720 | Msa1397970 | -0.804877 | 1.749052e-49 | -8.615850e-47 |
| Msa0139720 | Msa1399430 | -0.807034 | 6.154348e-50 | -8.615850e-47 |
| Msa0139720 | Msa1399500 | -0.809343 | 1.982675e-50 | -8.615850e-47 |
| Msa0139720 | Msa1409750 | -0.814673 | 1.366908e-51 | -8.615850e-47 |
| Msa0139720 | Msa1412760 | 0.800871 | 1.175872e-48 | -8.615850e-47 |
| Msa0139720 | Msa1416470 | 0.812669 | 3.774852e-51 | -8.615850e-47 |
| Msa0139720 | Msa1418190 | 0.806384 | 8.444952e-50 | -8.615850e-47 |
| Msa0139720 | Msa1419110 | -0.817486 | 3.216870e-52 | -8.615850e-47 |
| Msa0139720 | Msa1420020 | 0.819290 | 1.255003e-52 | -8.615850e-47 |
| Msa0139720 | Msa1425010 | -0.826872 | 2.137726e-54 | -8.615850e-47 |
| Msa0139720 | Msa1426420 | 0.840604 | 7.869591e-58 | -8.615850e-47 |
| Msa0139720 | Msa1427830 | -0.815150 | 1.071452e-51 | -8.615850e-47 |
| Msa0139720 | Msa1428420 | -0.801865 | 7.358773e-49 | -8.615850e-47 |
| Msa0139720 | Msa1431000 | -0.814956 | 1.182769e-51 | -8.615850e-47 |
| Msa0139720 | Msa1439120 | -0.825134 | 5.531979e-54 | -8.615850e-47 |
| Msa0139720 | Msa1439230 | -0.811307 | 7.475399e-51 | -8.615850e-47 |
| Msa0139720 | Msa1440220 | -0.847202 | 1.342740e-59 | -8.615850e-47 |
| Msa0139720 | Msa1449670 | 0.819060 | 1.415688e-52 | -8.615850e-47 |
| Msa0139720 | Msa1450020 | -0.855971 | 4.408917e-62 | -8.615850e-47 |
| Msa0139720 | Msa1454110 | -0.814766 | 1.303110e-51 | -8.615850e-47 |
| Msa0139720 | Msa1455660 | -0.821856 | 3.232425e-53 | -8.615850e-47 |
| Msa0139720 | Msa1460310 | 0.814770 | 1.300487e-51 | -8.615850e-47 |
| Msa0139720 | Msa1460380 | -0.801827 | 7.491606e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0139720 | MtrunA17_Chr5g0399341 | 98.374 | 246 | 4 | 0 | 1 | 246 | 1 | 246 | 4.79e-167 | 461 |
| Msa0139720 | MtrunA17_Chr8g0340161 | 77.912 | 249 | 53 | 2 | 1 | 248 | 1 | 248 | 3.03e-131 | 370 |
| Msa0139720 | MtrunA17_Chr2g0331261 | 75.820 | 244 | 58 | 1 | 4 | 246 | 5 | 248 | 2.74e-124 | 353 |
| Msa0139720 | MtrunA17_Chr4g0030861 | 62.832 | 226 | 81 | 2 | 24 | 246 | 26 | 251 | 1.76e-91 | 270 |
| Msa0139720 | MtrunA17_Chr7g0264961 | 62.041 | 245 | 92 | 1 | 3 | 246 | 5 | 249 | 9.16e-90 | 265 |
| Msa0139720 | MtrunA17_Chr1g0212671 | 54.656 | 247 | 109 | 2 | 3 | 247 | 5 | 250 | 2.17e-89 | 265 |
| Msa0139720 | MtrunA17_Chr1g0146161 | 54.393 | 239 | 104 | 3 | 1 | 238 | 1 | 235 | 4.55e-83 | 248 |
| Msa0139720 | MtrunA17_Chr7g0222791 | 54.472 | 246 | 111 | 1 | 3 | 247 | 5 | 250 | 2.01e-79 | 239 |
| Msa0139720 | MtrunA17_Chr1g0188771 | 50.833 | 240 | 117 | 1 | 3 | 241 | 5 | 244 | 9.02e-79 | 238 |
| Msa0139720 | MtrunA17_Chr1g0146171 | 52.209 | 249 | 111 | 5 | 1 | 246 | 1 | 244 | 1.97e-78 | 236 |
| Msa0139720 | MtrunA17_Chr6g0478191 | 53.333 | 240 | 111 | 1 | 3 | 241 | 5 | 244 | 2.74e-73 | 224 |
| Msa0139720 | MtrunA17_Chr4g0020781 | 48.990 | 198 | 99 | 2 | 44 | 240 | 4 | 200 | 4.48e-58 | 183 |
| Msa0139720 | MtrunA17_Chr5g0426131 | 38.866 | 247 | 133 | 8 | 8 | 248 | 26 | 260 | 3.43e-40 | 139 |
| Msa0139720 | MtrunA17_Chr2g0326621 | 38.153 | 249 | 134 | 7 | 9 | 238 | 28 | 275 | 1.34e-38 | 135 |
| Msa0139720 | MtrunA17_Chr7g0264111 | 39.301 | 229 | 122 | 5 | 19 | 231 | 39 | 266 | 6.28e-38 | 134 |
| Msa0139720 | MtrunA17_Chr4g0029071 | 37.712 | 236 | 130 | 5 | 19 | 238 | 39 | 273 | 3.25e-36 | 129 |
| Msa0139720 | MtrunA17_Chr3g0145671 | 39.631 | 217 | 116 | 5 | 19 | 223 | 37 | 250 | 4.56e-36 | 129 |
| Msa0139720 | MtrunA17_Chr1g0199731 | 37.991 | 229 | 125 | 5 | 19 | 231 | 39 | 266 | 1.74e-33 | 122 |
| Msa0139720 | MtrunA17_Chr3g0113211 | 35.398 | 226 | 130 | 5 | 19 | 231 | 55 | 277 | 4.25e-31 | 116 |
| Msa0139720 | MtrunA17_Chr5g0436701 | 35.841 | 226 | 129 | 5 | 19 | 231 | 55 | 277 | 2.56e-30 | 114 |
| Msa0139720 | MtrunA17_Chr5g0397391 | 37.168 | 226 | 126 | 6 | 19 | 231 | 52 | 274 | 3.64e-29 | 111 |
| Msa0139720 | MtrunA17_Chr8g0386961 | 36.283 | 226 | 128 | 7 | 19 | 231 | 52 | 274 | 8.58e-29 | 110 |
| Msa0139720 | MtrunA17_Chr4g0006001 | 36.889 | 225 | 127 | 6 | 19 | 231 | 56 | 277 | 9.40e-29 | 110 |
| Msa0139720 | MtrunA17_Chr2g0284611 | 35.874 | 223 | 131 | 7 | 3 | 223 | 24 | 236 | 3.65e-27 | 105 |
| Msa0139720 | MtrunA17_Chr3g0079421 | 36.170 | 235 | 136 | 7 | 15 | 247 | 22 | 244 | 4.25e-27 | 105 |
| Msa0139720 | MtrunA17_Chr2g0284591 | 33.921 | 227 | 139 | 6 | 3 | 228 | 22 | 238 | 2.44e-26 | 103 |
| Msa0139720 | MtrunA17_Chr2g0284631 | 34.167 | 240 | 141 | 8 | 14 | 249 | 86 | 312 | 4.79e-26 | 103 |
| Msa0139720 | MtrunA17_Chr7g0217331 | 34.272 | 213 | 133 | 3 | 19 | 231 | 37 | 242 | 7.33e-26 | 102 |
| Msa0139720 | MtrunA17_Chr8g0379901 | 32.068 | 237 | 144 | 6 | 14 | 246 | 34 | 257 | 7.69e-26 | 102 |
| Msa0139720 | MtrunA17_Chr5g0435051 | 33.610 | 241 | 141 | 7 | 14 | 248 | 35 | 262 | 9.60e-26 | 101 |
| Msa0139720 | MtrunA17_Chr2g0333771 | 35.749 | 207 | 114 | 5 | 23 | 223 | 84 | 277 | 1.81e-25 | 102 |
| Msa0139720 | MtrunA17_Chr4g0001221 | 35.122 | 205 | 118 | 4 | 23 | 223 | 79 | 272 | 3.73e-25 | 100 |
| Msa0139720 | MtrunA17_Chr8g0379911 | 32.365 | 241 | 149 | 5 | 10 | 246 | 26 | 256 | 7.60e-25 | 99.4 |
| Msa0139720 | MtrunA17_Chr4g0044201 | 33.621 | 232 | 128 | 7 | 18 | 246 | 34 | 242 | 1.09e-23 | 96.3 |
| Msa0139720 | MtrunA17_Chr1g0201331 | 36.792 | 212 | 114 | 6 | 23 | 228 | 78 | 275 | 4.06e-23 | 95.5 |
| Msa0139720 | MtrunA17_Chr2g0284581 | 31.739 | 230 | 146 | 7 | 18 | 246 | 37 | 256 | 9.63e-23 | 94.0 |
| Msa0139720 | MtrunA17_Chr2g0284601 | 33.491 | 212 | 132 | 6 | 36 | 246 | 5 | 208 | 3.70e-21 | 88.6 |
| Msa0139720 | MtrunA17_Chr1g0184541 | 33.491 | 212 | 129 | 6 | 19 | 228 | 62 | 263 | 7.73e-19 | 83.6 |
| Msa0139720 | MtrunA17_Chr6g0467461 | 37.607 | 117 | 53 | 3 | 127 | 242 | 3 | 100 | 3.90e-17 | 74.7 |
| Msa0139720 | MtrunA17_Chr4g0038591 | 32.129 | 249 | 137 | 8 | 11 | 237 | 43 | 281 | 1.37e-16 | 77.8 |
| Msa0139720 | MtrunA17_Chr8g0362451 | 39.604 | 101 | 41 | 3 | 143 | 242 | 8 | 89 | 8.34e-15 | 68.2 |
| Msa0139720 | MtrunA17_Chr4g0001121 | 45.000 | 60 | 33 | 0 | 164 | 223 | 6 | 65 | 1.44e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0139720 | AT5G47450.1 | 79.352 | 247 | 50 | 1 | 1 | 246 | 1 | 247 | 4.40e-137 | 385 |
| Msa0139720 | AT4G17340.1 | 82.400 | 250 | 43 | 1 | 1 | 249 | 1 | 250 | 2.03e-133 | 376 |
| Msa0139720 | AT3G16240.1 | 77.049 | 244 | 55 | 1 | 1 | 243 | 1 | 244 | 9.76e-130 | 367 |
| Msa0139720 | AT3G26520.1 | 64.069 | 231 | 82 | 1 | 7 | 236 | 10 | 240 | 9.56e-99 | 288 |
| Msa0139720 | AT2G36830.1 | 61.134 | 247 | 95 | 1 | 3 | 248 | 5 | 251 | 3.62e-98 | 287 |
| Msa0139720 | AT4G01470.1 | 55.061 | 247 | 108 | 2 | 3 | 246 | 5 | 251 | 4.44e-88 | 261 |
| Msa0139720 | AT1G17810.1 | 53.600 | 250 | 110 | 2 | 5 | 248 | 10 | 259 | 3.30e-76 | 232 |
| Msa0139720 | AT1G73190.1 | 53.909 | 243 | 106 | 2 | 5 | 241 | 10 | 252 | 3.40e-76 | 232 |
| Msa0139720 | AT2G25810.1 | 53.600 | 250 | 111 | 3 | 1 | 249 | 1 | 246 | 1.01e-75 | 230 |
| Msa0139720 | AT3G47440.1 | 45.798 | 238 | 126 | 3 | 1 | 236 | 4 | 240 | 7.29e-66 | 205 |
| Msa0139720 | AT5G60660.1 | 38.865 | 229 | 123 | 6 | 19 | 231 | 39 | 266 | 6.30e-37 | 132 |
| Msa0139720 | AT2G37170.2 | 38.306 | 248 | 134 | 8 | 9 | 238 | 68 | 314 | 7.93e-37 | 132 |
| Msa0139720 | AT2G37170.1 | 38.095 | 252 | 137 | 8 | 9 | 242 | 25 | 275 | 8.75e-37 | 131 |
| Msa0139720 | AT2G37180.1 | 37.860 | 243 | 134 | 6 | 19 | 245 | 37 | 278 | 1.92e-36 | 130 |
| Msa0139720 | AT4G35100.1 | 41.364 | 220 | 108 | 7 | 19 | 223 | 38 | 251 | 4.94e-36 | 129 |
| Msa0139720 | AT4G35100.2 | 41.364 | 220 | 108 | 7 | 19 | 223 | 38 | 251 | 4.94e-36 | 129 |
| Msa0139720 | AT3G53420.1 | 39.419 | 241 | 127 | 7 | 19 | 242 | 39 | 277 | 7.65e-36 | 129 |
| Msa0139720 | AT3G53420.2 | 39.419 | 241 | 127 | 7 | 19 | 242 | 39 | 277 | 7.65e-36 | 129 |
| Msa0139720 | AT3G54820.1 | 36.145 | 249 | 133 | 7 | 19 | 243 | 38 | 284 | 1.84e-35 | 128 |
| Msa0139720 | AT2G39010.1 | 35.802 | 243 | 133 | 6 | 11 | 231 | 24 | 265 | 1.23e-34 | 125 |
| Msa0139720 | AT2G16850.1 | 39.631 | 217 | 116 | 5 | 19 | 223 | 36 | 249 | 1.49e-33 | 122 |
| Msa0139720 | AT4G00430.1 | 37.333 | 225 | 126 | 5 | 19 | 231 | 53 | 274 | 3.09e-30 | 114 |
| Msa0139720 | AT4G23400.1 | 36.889 | 225 | 127 | 5 | 19 | 231 | 53 | 274 | 4.55e-30 | 114 |
| Msa0139720 | AT3G61430.2 | 36.444 | 225 | 128 | 5 | 19 | 231 | 52 | 273 | 6.24e-30 | 113 |
| Msa0139720 | AT3G61430.1 | 36.444 | 225 | 128 | 5 | 19 | 231 | 52 | 273 | 6.24e-30 | 113 |
| Msa0139720 | AT1G52180.1 | 60.674 | 89 | 35 | 0 | 123 | 211 | 34 | 122 | 9.41e-30 | 108 |
| Msa0139720 | AT1G01620.1 | 36.889 | 225 | 127 | 5 | 19 | 231 | 52 | 273 | 1.02e-29 | 113 |
| Msa0139720 | AT2G45960.1 | 35.556 | 225 | 130 | 5 | 19 | 231 | 52 | 273 | 7.41e-29 | 110 |
| Msa0139720 | AT1G01620.2 | 39.153 | 189 | 102 | 4 | 55 | 231 | 14 | 201 | 9.89e-27 | 103 |
| Msa0139720 | AT4G18910.1 | 33.745 | 243 | 143 | 7 | 12 | 246 | 45 | 277 | 5.98e-26 | 103 |
| Msa0139720 | AT5G37810.1 | 33.913 | 230 | 139 | 6 | 19 | 246 | 43 | 261 | 8.58e-26 | 102 |
| Msa0139720 | AT1G80760.1 | 33.043 | 230 | 135 | 5 | 23 | 246 | 84 | 300 | 1.80e-25 | 102 |
| Msa0139720 | AT4G19030.1 | 32.099 | 243 | 147 | 6 | 12 | 246 | 48 | 280 | 2.06e-25 | 101 |
| Msa0139720 | AT5G37820.1 | 34.545 | 220 | 124 | 6 | 19 | 231 | 43 | 249 | 1.95e-24 | 99.0 |
| Msa0139720 | AT5G37820.2 | 33.191 | 235 | 134 | 7 | 19 | 246 | 79 | 297 | 3.09e-24 | 99.0 |
| Msa0139720 | AT3G06100.1 | 31.878 | 229 | 150 | 3 | 6 | 234 | 33 | 255 | 3.74e-24 | 98.2 |
| Msa0139720 | AT1G31885.1 | 32.653 | 245 | 141 | 5 | 5 | 232 | 20 | 257 | 4.11e-24 | 99.0 |
| Msa0139720 | AT3G06100.2 | 32.864 | 213 | 137 | 3 | 22 | 234 | 1 | 207 | 1.52e-22 | 92.8 |
| Msa0139720 | AT4G10380.1 | 32.895 | 228 | 132 | 6 | 6 | 223 | 59 | 275 | 1.73e-21 | 91.3 |
| Msa0139720 | AT1G31885.2 | 34.762 | 210 | 122 | 4 | 31 | 232 | 1 | 203 | 3.81e-21 | 89.7 |
| Msa0139720 | AT2G45960.2 | 35.025 | 197 | 116 | 4 | 19 | 206 | 52 | 245 | 5.80e-21 | 89.4 |
| Msa0139720 | AT2G45960.3 | 35.025 | 197 | 116 | 4 | 19 | 206 | 52 | 245 | 7.09e-21 | 89.7 |
| Msa0139720 | AT2G39010.2 | 32.222 | 180 | 106 | 4 | 11 | 175 | 24 | 202 | 2.45e-18 | 81.3 |
| Msa0139720 | AT2G34390.1 | 32.599 | 227 | 137 | 6 | 13 | 231 | 42 | 260 | 1.26e-17 | 80.5 |
| Msa0139720 | AT2G34390.2 | 33.028 | 218 | 130 | 6 | 22 | 231 | 9 | 218 | 1.03e-16 | 77.4 |
| Msa0139720 | AT3G06100.3 | 35.606 | 132 | 84 | 1 | 103 | 234 | 44 | 174 | 2.03e-15 | 72.8 |
| Msa0139720 | AT4G00430.2 | 34.783 | 161 | 97 | 3 | 19 | 174 | 53 | 210 | 5.58e-15 | 72.0 |
Find 109 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACCTACCTTCACCATTT+TGG | 0.184348 | 1_3:-73559727 | None:intergenic |
| GGCTTGGCTGGGTTGATTTA+TGG | 0.208743 | 1_3:+73561624 | Msa0139720:CDS |
| TTTCAAGTAAATTGCCAAAA+TGG | 0.224680 | 1_3:+73559713 | Msa0139720:exon |
| CCTTAGCGGTGACATAATTT+AGG | 0.257284 | 1_3:-73560986 | None:intergenic |
| TTGCTGATAACTGGATCTAT+TGG | 0.258320 | 1_3:+73561580 | Msa0139720:CDS |
| TCCTAACTGGTCTCTTCTAT+TGG | 0.261693 | 1_3:+73560925 | Msa0139720:CDS |
| ATTTATGGTGACGTCTTTAT+TGG | 0.274341 | 1_3:+73561639 | Msa0139720:CDS |
| CACAGCAGCTGACCCCAAAA+AGG | 0.277234 | 1_3:+73561425 | Msa0139720:CDS |
| TTGAACCCAGCTGTTACTTT+TGG | 0.284387 | 1_3:+73560876 | Msa0139720:CDS |
| GCTTGCTGTCATGAACCTTT+TGG | 0.293239 | 1_3:+73561752 | Msa0139720:three_prime_UTR |
| ACCATTGCACCGATTGCTAT+TGG | 0.294639 | 1_3:+73561459 | Msa0139720:CDS |
| GTGGAAACTTTGCTGATAAC+TGG | 0.301786 | 1_3:+73561571 | Msa0139720:CDS |
| TTTGAGATTATCATAACATT+TGG | 0.330146 | 1_3:+73561381 | Msa0139720:CDS |
| TCAAACACTAATCCAGCAAT+AGG | 0.335099 | 1_3:-73561363 | None:intergenic |
| ACCTGAGATGTTTGCTGCTA+TGG | 0.342340 | 1_3:-73560847 | None:intergenic |
| TAATTAACCGAAGACTAATT+AGG | 0.357090 | 1_3:-73559676 | None:intergenic |
| ATGAACCCGGCTCGCTCATT+CGG | 0.368228 | 1_3:+73561534 | Msa0139720:CDS |
| CCATTGCACCGATTGCTATT+GGG | 0.370396 | 1_3:+73561460 | Msa0139720:CDS |
| CTCTGATAGATAAGCCTTAA+GGG | 0.370976 | 1_3:-73559781 | None:intergenic |
| TATTGGGTTGGACCATTGAT+AGG | 0.371182 | 1_3:+73561597 | Msa0139720:CDS |
| TGCTGATAACTGGATCTATT+GGG | 0.375661 | 1_3:+73561581 | Msa0139720:CDS |
| CATGCATTTGCACTATTTGT+TGG | 0.376412 | 1_3:+73560819 | Msa0139720:CDS |
| TATGTTTCAGATGCTGGTGC+TGG | 0.377613 | 1_3:-73561672 | None:intergenic |
| TTGATAGGAGGAGGCTTGGC+TGG | 0.378621 | 1_3:+73561612 | Msa0139720:CDS |
| TATTGGATTGCCCAATTGCT+TGG | 0.382330 | 1_3:+73560942 | Msa0139720:CDS |
| AAGGGTGAGGGTGGTTAGTT+AGG | 0.388555 | 1_3:+73559466 | Msa0139720:five_prime_UTR |
| CAACGATGGAGCCAAGCAAT+TGG | 0.397490 | 1_3:-73560953 | None:intergenic |
| CCAACCCATGGAGTGGCTGC+TGG | 0.411983 | 1_3:+73561333 | Msa0139720:CDS |
| TAAGGGTATGTTTCAGATGC+TGG | 0.414974 | 1_3:-73561678 | None:intergenic |
| GGCAACATCACCATCCTAAC+TGG | 0.420270 | 1_3:+73560912 | Msa0139720:CDS |
| AAAATGGTGAAGGTAGGTTT+TGG | 0.422290 | 1_3:+73559729 | Msa0139720:exon |
| TAAAATTGAATCATGGTTGT+TGG | 0.422441 | 1_3:+73561699 | Msa0139720:exon |
| GCTGGACTGAACCCTATTGC+TGG | 0.425119 | 1_3:+73561351 | Msa0139720:CDS |
| ATGTTTCAGATGCTGGTGCT+GGG | 0.433498 | 1_3:-73561671 | None:intergenic |
| ACTCTGATAGATAAGCCTTA+AGG | 0.443526 | 1_3:-73559782 | None:intergenic |
| CAAAACACCTAATTAGTCTT+CGG | 0.444194 | 1_3:+73559669 | Msa0139720:five_prime_UTR |
| CTTGGATCCAGCGGGTTTAG+TGG | 0.446191 | 1_3:+73560782 | Msa0139720:CDS |
| TTCGGCCCAGCTGTGGTTAG+TGG | 0.448499 | 1_3:+73561552 | Msa0139720:CDS |
| TCAGTCCAGCAGCCACTCCA+TGG | 0.457656 | 1_3:-73561338 | None:intergenic |
| CTGGGCCGAATGAGCGAGCC+GGG | 0.457837 | 1_3:-73561539 | None:intergenic |
| ATTGCTATTGGGTTCGTTGT+CGG | 0.459779 | 1_3:+73561471 | Msa0139720:CDS |
| AAGTTTCCACTAACCACAGC+TGG | 0.477936 | 1_3:-73561558 | None:intergenic |
| GATTATCATAACATTTGGAT+TGG | 0.481301 | 1_3:+73561386 | Msa0139720:CDS |
| TGTTGCCCTTGCACCGTCCA+TGG | 0.481816 | 1_3:-73559530 | None:intergenic |
| GCTAATCCAAAAGTAACAGC+TGG | 0.483137 | 1_3:-73560882 | None:intergenic |
| TTCATTGAACCTCCACTGAA+TGG | 0.492137 | 1_3:-73561516 | None:intergenic |
| GCCATAGCAGCAAACATCTC+AGG | 0.493649 | 1_3:+73560846 | Msa0139720:CDS |
| AACGATGGAGCCAAGCAATT+GGG | 0.495370 | 1_3:-73560952 | None:intergenic |
| TGATAGGAGGAGGCTTGGCT+GGG | 0.495930 | 1_3:+73561613 | Msa0139720:CDS |
| TTGAAATAAAGAAAAGGGTG+AGG | 0.496455 | 1_3:+73559453 | Msa0139720:five_prime_UTR |
| ACCATTGATAGGAGGAGGCT+TGG | 0.499184 | 1_3:+73561608 | Msa0139720:CDS |
| ATACCCTTAAAATTGAATCA+TGG | 0.499958 | 1_3:+73561692 | Msa0139720:exon |
| TGCATAAGAATTCTTTGCCA+TGG | 0.501658 | 1_3:-73559615 | None:intergenic |
| CAAACACTAATCCAGCAATA+GGG | 0.503864 | 1_3:-73561362 | None:intergenic |
| TGAACAAGTTTAAGCTTGAA+AGG | 0.504042 | 1_3:-73561723 | None:intergenic |
| AAAATGTATATGATTGTGAA+AGG | 0.508605 | 1_3:-73559566 | None:intergenic |
| CACTAAACCCGCTGGATCCA+AGG | 0.511849 | 1_3:-73560781 | None:intergenic |
| GCCAAGCCTCCTCCTATCAA+TGG | 0.517459 | 1_3:-73561609 | None:intergenic |
| TCTAACATCAGATGCAGCCT+TGG | 0.521701 | 1_3:+73560764 | Msa0139720:CDS |
| CCCAATAGCAATCGGTGCAA+TGG | 0.522337 | 1_3:-73561460 | None:intergenic |
| GGCAATTTACTTGAAAACAA+AGG | 0.531006 | 1_3:-73559706 | None:intergenic |
| ATATGTCCATGGACGGTGCA+AGG | 0.535026 | 1_3:+73559524 | Msa0139720:five_prime_UTR |
| TGTATATGATTGTGAAAGGG+AGG | 0.536341 | 1_3:-73559562 | None:intergenic |
| GTTGGACCATTGATAGGAGG+AGG | 0.537767 | 1_3:+73561603 | Msa0139720:CDS |
| TTGCAGAGTGTTCCAACCCA+TGG | 0.540788 | 1_3:+73561321 | Msa0139720:intron |
| ATTTGCACTATTTGTTGGTG+TGG | 0.541154 | 1_3:+73560824 | Msa0139720:CDS |
| GCTGGGCCGAATGAGCGAGC+CGG | 0.544156 | 1_3:-73561540 | None:intergenic |
| CAGTGGAGGTTCAATGAACC+CGG | 0.550196 | 1_3:+73561521 | Msa0139720:CDS |
| CAGTCCAGCAGCCACTCCAT+GGG | 0.550781 | 1_3:-73561337 | None:intergenic |
| AAATGTATATGATTGTGAAA+GGG | 0.558417 | 1_3:-73559565 | None:intergenic |
| TACAATTTATTACAAGCAGC+GGG | 0.560033 | 1_3:-73561822 | None:intergenic |
| TGAACCTCCACTGAATGGAC+CGG | 0.561117 | 1_3:-73561511 | None:intergenic |
| CCAGCAGCCACTCCATGGGT+TGG | 0.562685 | 1_3:-73561333 | None:intergenic |
| TCCAATAGAAGAGACCAGTT+AGG | 0.566741 | 1_3:-73560926 | None:intergenic |
| TCGCTCATTCGGCCCAGCTG+TGG | 0.568998 | 1_3:+73561545 | Msa0139720:CDS |
| TAATGCTTGATTATAATGCT+AGG | 0.569994 | 1_3:-73559490 | None:intergenic |
| ACAACGAACCCAATAGCAAT+CGG | 0.576808 | 1_3:-73561468 | None:intergenic |
| ATTGCCAAAATGGTGAAGGT+AGG | 0.577657 | 1_3:+73559723 | Msa0139720:exon |
| GATAACTGGATCTATTGGGT+TGG | 0.583637 | 1_3:+73561585 | Msa0139720:CDS |
| TATGTCCATGGACGGTGCAA+GGG | 0.584097 | 1_3:+73559525 | Msa0139720:five_prime_UTR |
| CCTAAATTATGTCACCGCTA+AGG | 0.584592 | 1_3:+73560986 | Msa0139720:CDS |
| TGAAATAAAGAAAAGGGTGA+GGG | 0.584837 | 1_3:+73559454 | Msa0139720:five_prime_UTR |
| GATGCAGCCTTGGATCCAGC+GGG | 0.590239 | 1_3:+73560774 | Msa0139720:CDS |
| TCTAACAACTCATATGTCCA+TGG | 0.591289 | 1_3:+73559513 | Msa0139720:five_prime_UTR |
| AATAAAGAAAAGGGTGAGGG+TGG | 0.594742 | 1_3:+73559457 | Msa0139720:five_prime_UTR |
| GCTACTGCCACTAAACCCGC+TGG | 0.595890 | 1_3:-73560789 | None:intergenic |
| TAGCGGTGACATAATTTAGG+AGG | 0.596395 | 1_3:-73560983 | None:intergenic |
| GATGGTGATGTTGCCTCCAA+TGG | 0.596576 | 1_3:-73560904 | None:intergenic |
| GTAAATTGCCAAAATGGTGA+AGG | 0.596896 | 1_3:+73559719 | Msa0139720:exon |
| ATAGAAGAGACCAGTTAGGA+TGG | 0.597084 | 1_3:-73560922 | None:intergenic |
| GGGTTTAGTGGCAGTAGCTG+TGG | 0.598717 | 1_3:+73560794 | Msa0139720:CDS |
| TTACAATTTATTACAAGCAG+CGG | 0.603382 | 1_3:-73561823 | None:intergenic |
| TGTTTCAGATGCTGGTGCTG+GGG | 0.605971 | 1_3:-73561670 | None:intergenic |
| TGGGTTGGACCATTGATAGG+AGG | 0.606483 | 1_3:+73561600 | Msa0139720:CDS |
| TTAGCCGCCGGTCCATTCAG+TGG | 0.614841 | 1_3:+73561504 | Msa0139720:CDS |
| TGGCAAAGAATTCTTATGCA+AGG | 0.616445 | 1_3:+73559618 | Msa0139720:five_prime_UTR |
| CTAATCCAAAAGTAACAGCT+GGG | 0.617109 | 1_3:-73560881 | None:intergenic |
| GCCGCCGGTCCATTCAGTGG+AGG | 0.622801 | 1_3:+73561507 | Msa0139720:CDS |
| GGAGCTAACATCTTAGCCGC+CGG | 0.625071 | 1_3:+73561492 | Msa0139720:CDS |
| AACTCTTCATATATATACCA+TGG | 0.629426 | 1_3:+73559598 | Msa0139720:five_prime_UTR |
| GTATATGATTGTGAAAGGGA+GGG | 0.633698 | 1_3:-73559561 | None:intergenic |
| AGATGCAGCCTTGGATCCAG+CGG | 0.648942 | 1_3:+73560773 | Msa0139720:CDS |
| ACAACTCATATGTCCATGGA+CGG | 0.650006 | 1_3:+73559517 | Msa0139720:five_prime_UTR |
| ATAGCAGCAAACATCTCAGG+TGG | 0.653320 | 1_3:+73560849 | Msa0139720:CDS |
| TAGGAGGAGACATGCAACGA+TGG | 0.659160 | 1_3:-73560967 | None:intergenic |
| AGTTTCCACTAACCACAGCT+GGG | 0.662001 | 1_3:-73561557 | None:intergenic |
| GAGTGTTCCAACCCATGGAG+TGG | 0.667041 | 1_3:+73561326 | Msa0139720:intron |
| ACCTCCACTGAATGGACCGG+CGG | 0.670839 | 1_3:-73561508 | None:intergenic |
| TGATAGATAAGCCTTAAGGG+AGG | 0.711676 | 1_3:-73559778 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATATATTAATATATTATGT+TGG | + | chr1_3:73561290-73561309 | Msa0139720:intron | 10.0% |
| !! | CATATATTAATATATTATGT+TGG | + | chr1_3:73561290-73561309 | Msa0139720:intron | 10.0% |
| !!! | AAAGTACATTACATAATTTT+AGG | + | chr1_3:73561017-73561036 | Msa0139720:intron | 15.0% |
| !! | TTCAATGATTTATTAATATG+TGG | - | chr1_3:73561244-73561263 | None:intergenic | 15.0% |
| !!! | AAAGTACATTACATAATTTT+AGG | + | chr1_3:73561017-73561036 | Msa0139720:intron | 15.0% |
| !! | TTCAATGATTTATTAATATG+TGG | - | chr1_3:73561244-73561263 | None:intergenic | 15.0% |
| !! | AAATGTATATGATTGTGAAA+GGG | - | chr1_3:73559568-73559587 | None:intergenic | 20.0% |
| !! | AAAATGTATATGATTGTGAA+AGG | - | chr1_3:73559569-73559588 | None:intergenic | 20.0% |
| !! | AAAATTATGCAAGAAATAAG+AGG | + | chr1_3:73559938-73559957 | Msa0139720:intron | 20.0% |
| !!! | TCTATGAGATTTTCATAAAT+TGG | - | chr1_3:73559997-73560016 | None:intergenic | 20.0% |
| !! | AAATGTTTGACAAATGATAA+CGG | + | chr1_3:73560169-73560188 | Msa0139720:intron | 20.0% |
| !! | ACTTCAATAAATTGCAATAT+TGG | + | chr1_3:73560271-73560290 | Msa0139720:intron | 20.0% |
| !! | AAATGTTTGACAAATGATAA+CGG | + | chr1_3:73560169-73560188 | Msa0139720:intron | 20.0% |
| !! | ACTTCAATAAATTGCAATAT+TGG | + | chr1_3:73560271-73560290 | Msa0139720:intron | 20.0% |
| !!! | TTTGAGATTATCATAACATT+TGG | + | chr1_3:73561381-73561400 | Msa0139720:CDS | 20.0% |
| !! | AAAGAAAAAACAAAACCAAA+AGG | - | chr1_3:73561770-73561789 | None:intergenic | 20.0% |
| !! | AAATGTATATGATTGTGAAA+GGG | - | chr1_3:73559568-73559587 | None:intergenic | 20.0% |
| !! | AAAATGTATATGATTGTGAA+AGG | - | chr1_3:73559569-73559588 | None:intergenic | 20.0% |
| !! | AAAATTATGCAAGAAATAAG+AGG | + | chr1_3:73559938-73559957 | Msa0139720:intron | 20.0% |
| !!! | TCTATGAGATTTTCATAAAT+TGG | - | chr1_3:73559997-73560016 | None:intergenic | 20.0% |
| !! | AAATGTTTGACAAATGATAA+CGG | + | chr1_3:73560169-73560188 | Msa0139720:intron | 20.0% |
| !! | ACTTCAATAAATTGCAATAT+TGG | + | chr1_3:73560271-73560290 | Msa0139720:intron | 20.0% |
| !! | AAATGTTTGACAAATGATAA+CGG | + | chr1_3:73560169-73560188 | Msa0139720:intron | 20.0% |
| !! | ACTTCAATAAATTGCAATAT+TGG | + | chr1_3:73560271-73560290 | Msa0139720:intron | 20.0% |
| !!! | TTTGAGATTATCATAACATT+TGG | + | chr1_3:73561381-73561400 | Msa0139720:CDS | 20.0% |
| !! | AAAGAAAAAACAAAACCAAA+AGG | - | chr1_3:73561770-73561789 | None:intergenic | 20.0% |
| ! | TAATGCTTGATTATAATGCT+AGG | - | chr1_3:73559493-73559512 | None:intergenic | 25.0% |
| ! | AACTCTTCATATATATACCA+TGG | + | chr1_3:73559598-73559617 | Msa0139720:five_prime_UTR | 25.0% |
| ! | TAATTAACCGAAGACTAATT+AGG | - | chr1_3:73559679-73559698 | None:intergenic | 25.0% |
| !! | TTTCAAGTAAATTGCCAAAA+TGG | + | chr1_3:73559713-73559732 | Msa0139720:exon | 25.0% |
| ! | AAATATAAGCTTACATCAGA+TGG | + | chr1_3:73560296-73560315 | Msa0139720:intron | 25.0% |
| ! | AAATATAAGCTTACATCAGA+TGG | + | chr1_3:73560296-73560315 | Msa0139720:intron | 25.0% |
| !! | TACTTTTGAATATACCTTAG+CGG | - | chr1_3:73561003-73561022 | None:intergenic | 25.0% |
| !!! | CATTACATAATTTTAGGTTC+AGG | + | chr1_3:73561023-73561042 | Msa0139720:intron | 25.0% |
| ! | GATTATCATAACATTTGGAT+TGG | + | chr1_3:73561386-73561405 | Msa0139720:CDS | 25.0% |
| ! | ATACCCTTAAAATTGAATCA+TGG | + | chr1_3:73561692-73561711 | Msa0139720:exon | 25.0% |
| !! | CAACCATGATTCAATTTTAA+GGG | - | chr1_3:73561698-73561717 | None:intergenic | 25.0% |
| !! | ACAACCATGATTCAATTTTA+AGG | - | chr1_3:73561699-73561718 | None:intergenic | 25.0% |
| ! | TAAAATTGAATCATGGTTGT+TGG | + | chr1_3:73561699-73561718 | Msa0139720:exon | 25.0% |
| ! | TTACAATTTATTACAAGCAG+CGG | - | chr1_3:73561826-73561845 | None:intergenic | 25.0% |
| ! | TAATGCTTGATTATAATGCT+AGG | - | chr1_3:73559493-73559512 | None:intergenic | 25.0% |
| ! | AACTCTTCATATATATACCA+TGG | + | chr1_3:73559598-73559617 | Msa0139720:five_prime_UTR | 25.0% |
| ! | TAATTAACCGAAGACTAATT+AGG | - | chr1_3:73559679-73559698 | None:intergenic | 25.0% |
| !! | TTTCAAGTAAATTGCCAAAA+TGG | + | chr1_3:73559713-73559732 | Msa0139720:exon | 25.0% |
| ! | AAATATAAGCTTACATCAGA+TGG | + | chr1_3:73560296-73560315 | Msa0139720:intron | 25.0% |
| ! | AAATATAAGCTTACATCAGA+TGG | + | chr1_3:73560296-73560315 | Msa0139720:intron | 25.0% |
| !! | TACTTTTGAATATACCTTAG+CGG | - | chr1_3:73561003-73561022 | None:intergenic | 25.0% |
| !!! | CATTACATAATTTTAGGTTC+AGG | + | chr1_3:73561023-73561042 | Msa0139720:intron | 25.0% |
| ! | GATTATCATAACATTTGGAT+TGG | + | chr1_3:73561386-73561405 | Msa0139720:CDS | 25.0% |
| ! | ATACCCTTAAAATTGAATCA+TGG | + | chr1_3:73561692-73561711 | Msa0139720:exon | 25.0% |
| !! | CAACCATGATTCAATTTTAA+GGG | - | chr1_3:73561698-73561717 | None:intergenic | 25.0% |
| !! | ACAACCATGATTCAATTTTA+AGG | - | chr1_3:73561699-73561718 | None:intergenic | 25.0% |
| ! | TAAAATTGAATCATGGTTGT+TGG | + | chr1_3:73561699-73561718 | Msa0139720:exon | 25.0% |
| ! | TTACAATTTATTACAAGCAG+CGG | - | chr1_3:73561826-73561845 | None:intergenic | 25.0% |
| TTGAAATAAAGAAAAGGGTG+AGG | + | chr1_3:73559453-73559472 | Msa0139720:five_prime_UTR | 30.0% | |
| TGAAATAAAGAAAAGGGTGA+GGG | + | chr1_3:73559454-73559473 | Msa0139720:five_prime_UTR | 30.0% | |
| !! | CAAAACACCTAATTAGTCTT+CGG | + | chr1_3:73559669-73559688 | Msa0139720:five_prime_UTR | 30.0% |
| GGCAATTTACTTGAAAACAA+AGG | - | chr1_3:73559709-73559728 | None:intergenic | 30.0% | |
| !! | AATAAGCTTTGTAGTTCTAG+AGG | + | chr1_3:73559961-73559980 | Msa0139720:intron | 30.0% |
| TTACGTGAGACAAAATTTGA+AGG | + | chr1_3:73560217-73560236 | Msa0139720:intron | 30.0% | |
| TGGTAACAATATTGGACTAT+TGG | + | chr1_3:73560320-73560339 | Msa0139720:intron | 30.0% | |
| ACTATTGGTACAAATGTAGA+AGG | + | chr1_3:73560335-73560354 | Msa0139720:intron | 30.0% | |
| TGGTAACAATATTGGACTAT+TGG | + | chr1_3:73560320-73560339 | Msa0139720:intron | 30.0% | |
| ACTATTGGTACAAATGTAGA+AGG | + | chr1_3:73560335-73560354 | Msa0139720:intron | 30.0% | |
| !!! | TACATAATTTTAGGTTCAGG+TGG | + | chr1_3:73561026-73561045 | Msa0139720:intron | 30.0% |
| !!! | GGTTGATGACAAATTGTTTT+GGG | + | chr1_3:73561060-73561079 | Msa0139720:intron | 30.0% |
| AAATTGTTTCAGTCGAGATT+TGG | - | chr1_3:73561096-73561115 | None:intergenic | 30.0% | |
| !!! | TTTCATCCTCCAGTTTTAAA+TGG | - | chr1_3:73561174-73561193 | None:intergenic | 30.0% |
| ! | ATTTATGGTGACGTCTTTAT+TGG | + | chr1_3:73561639-73561658 | Msa0139720:CDS | 30.0% |
| TGAACAAGTTTAAGCTTGAA+AGG | - | chr1_3:73561726-73561745 | None:intergenic | 30.0% | |
| TACAATTTATTACAAGCAGC+GGG | - | chr1_3:73561825-73561844 | None:intergenic | 30.0% | |
| TTGAAATAAAGAAAAGGGTG+AGG | + | chr1_3:73559453-73559472 | Msa0139720:five_prime_UTR | 30.0% | |
| TGAAATAAAGAAAAGGGTGA+GGG | + | chr1_3:73559454-73559473 | Msa0139720:five_prime_UTR | 30.0% | |
| !! | CAAAACACCTAATTAGTCTT+CGG | + | chr1_3:73559669-73559688 | Msa0139720:five_prime_UTR | 30.0% |
| GGCAATTTACTTGAAAACAA+AGG | - | chr1_3:73559709-73559728 | None:intergenic | 30.0% | |
| !! | AATAAGCTTTGTAGTTCTAG+AGG | + | chr1_3:73559961-73559980 | Msa0139720:intron | 30.0% |
| TTACGTGAGACAAAATTTGA+AGG | + | chr1_3:73560217-73560236 | Msa0139720:intron | 30.0% | |
| TGGTAACAATATTGGACTAT+TGG | + | chr1_3:73560320-73560339 | Msa0139720:intron | 30.0% | |
| ACTATTGGTACAAATGTAGA+AGG | + | chr1_3:73560335-73560354 | Msa0139720:intron | 30.0% | |
| TGGTAACAATATTGGACTAT+TGG | + | chr1_3:73560320-73560339 | Msa0139720:intron | 30.0% | |
| ACTATTGGTACAAATGTAGA+AGG | + | chr1_3:73560335-73560354 | Msa0139720:intron | 30.0% | |
| !!! | TACATAATTTTAGGTTCAGG+TGG | + | chr1_3:73561026-73561045 | Msa0139720:intron | 30.0% |
| !!! | GGTTGATGACAAATTGTTTT+GGG | + | chr1_3:73561060-73561079 | Msa0139720:intron | 30.0% |
| AAATTGTTTCAGTCGAGATT+TGG | - | chr1_3:73561096-73561115 | None:intergenic | 30.0% | |
| !!! | TTTCATCCTCCAGTTTTAAA+TGG | - | chr1_3:73561174-73561193 | None:intergenic | 30.0% |
| ! | ATTTATGGTGACGTCTTTAT+TGG | + | chr1_3:73561639-73561658 | Msa0139720:CDS | 30.0% |
| TGAACAAGTTTAAGCTTGAA+AGG | - | chr1_3:73561726-73561745 | None:intergenic | 30.0% | |
| TACAATTTATTACAAGCAGC+GGG | - | chr1_3:73561825-73561844 | None:intergenic | 30.0% | |
| TCTAACAACTCATATGTCCA+TGG | + | chr1_3:73559513-73559532 | Msa0139720:five_prime_UTR | 35.0% | |
| GTATATGATTGTGAAAGGGA+GGG | - | chr1_3:73559564-73559583 | None:intergenic | 35.0% | |
| TGTATATGATTGTGAAAGGG+AGG | - | chr1_3:73559565-73559584 | None:intergenic | 35.0% | |
| TGCATAAGAATTCTTTGCCA+TGG | - | chr1_3:73559618-73559637 | None:intergenic | 35.0% | |
| TGGCAAAGAATTCTTATGCA+AGG | + | chr1_3:73559618-73559637 | Msa0139720:five_prime_UTR | 35.0% | |
| GTAAATTGCCAAAATGGTGA+AGG | + | chr1_3:73559719-73559738 | Msa0139720:exon | 35.0% | |
| ! | AAAACCTACCTTCACCATTT+TGG | - | chr1_3:73559730-73559749 | None:intergenic | 35.0% |
| ! | AAAATGGTGAAGGTAGGTTT+TGG | + | chr1_3:73559729-73559748 | Msa0139720:exon | 35.0% |
| CTCTGATAGATAAGCCTTAA+GGG | - | chr1_3:73559784-73559803 | None:intergenic | 35.0% | |
| ACTCTGATAGATAAGCCTTA+AGG | - | chr1_3:73559785-73559804 | None:intergenic | 35.0% | |
| ATAAGCTTACATCAGATGGT+TGG | + | chr1_3:73560300-73560319 | Msa0139720:intron | 35.0% | |
| !! | CAGATGGTTGGTAACAATAT+TGG | + | chr1_3:73560312-73560331 | Msa0139720:intron | 35.0% |
| GTAGAAGGAATGATGAAATG+TGG | + | chr1_3:73560350-73560369 | Msa0139720:intron | 35.0% | |
| ATAAGCTTACATCAGATGGT+TGG | + | chr1_3:73560300-73560319 | Msa0139720:intron | 35.0% | |
| !! | CAGATGGTTGGTAACAATAT+TGG | + | chr1_3:73560312-73560331 | Msa0139720:intron | 35.0% |
| GTAGAAGGAATGATGAAATG+TGG | + | chr1_3:73560350-73560369 | Msa0139720:intron | 35.0% | |
| CATGCATTTGCACTATTTGT+TGG | + | chr1_3:73560819-73560838 | Msa0139720:CDS | 35.0% | |
| ! | ATTTGCACTATTTGTTGGTG+TGG | + | chr1_3:73560824-73560843 | Msa0139720:CDS | 35.0% |
| CTAATCCAAAAGTAACAGCT+GGG | - | chr1_3:73560884-73560903 | None:intergenic | 35.0% | |
| !!! | GTTACTTTTGGATTAGCCAT+TGG | + | chr1_3:73560888-73560907 | Msa0139720:CDS | 35.0% |
| !!! | TTTTAGGTTCAGGTGGTTAA+TGG | + | chr1_3:73561033-73561052 | Msa0139720:intron | 35.0% |
| !!! | CGGTTGATGACAAATTGTTT+TGG | + | chr1_3:73561059-73561078 | Msa0139720:intron | 35.0% |
| TTAGTTGAACTCCTGAACAT+CGG | + | chr1_3:73561139-73561158 | Msa0139720:intron | 35.0% | |
| !!! | CTCCAGTTTTAAATGGAAAG+GGG | - | chr1_3:73561167-73561186 | None:intergenic | 35.0% |
| !!! | CCTCCAGTTTTAAATGGAAA+GGG | - | chr1_3:73561168-73561187 | None:intergenic | 35.0% |
| !!! | TCCTCCAGTTTTAAATGGAA+AGG | - | chr1_3:73561169-73561188 | None:intergenic | 35.0% |
| CAAACACTAATCCAGCAATA+GGG | - | chr1_3:73561365-73561384 | None:intergenic | 35.0% | |
| TCAAACACTAATCCAGCAAT+AGG | - | chr1_3:73561366-73561385 | None:intergenic | 35.0% | |
| TTGCTGATAACTGGATCTAT+TGG | + | chr1_3:73561580-73561599 | Msa0139720:CDS | 35.0% | |
| TGCTGATAACTGGATCTATT+GGG | + | chr1_3:73561581-73561600 | Msa0139720:CDS | 35.0% | |
| TCTAACAACTCATATGTCCA+TGG | + | chr1_3:73559513-73559532 | Msa0139720:five_prime_UTR | 35.0% | |
| GTATATGATTGTGAAAGGGA+GGG | - | chr1_3:73559564-73559583 | None:intergenic | 35.0% | |
| TGTATATGATTGTGAAAGGG+AGG | - | chr1_3:73559565-73559584 | None:intergenic | 35.0% | |
| TGCATAAGAATTCTTTGCCA+TGG | - | chr1_3:73559618-73559637 | None:intergenic | 35.0% | |
| TGGCAAAGAATTCTTATGCA+AGG | + | chr1_3:73559618-73559637 | Msa0139720:five_prime_UTR | 35.0% | |
| GTAAATTGCCAAAATGGTGA+AGG | + | chr1_3:73559719-73559738 | Msa0139720:exon | 35.0% | |
| ! | AAAACCTACCTTCACCATTT+TGG | - | chr1_3:73559730-73559749 | None:intergenic | 35.0% |
| ! | AAAATGGTGAAGGTAGGTTT+TGG | + | chr1_3:73559729-73559748 | Msa0139720:exon | 35.0% |
| CTCTGATAGATAAGCCTTAA+GGG | - | chr1_3:73559784-73559803 | None:intergenic | 35.0% | |
| ACTCTGATAGATAAGCCTTA+AGG | - | chr1_3:73559785-73559804 | None:intergenic | 35.0% | |
| ATAAGCTTACATCAGATGGT+TGG | + | chr1_3:73560300-73560319 | Msa0139720:intron | 35.0% | |
| !! | CAGATGGTTGGTAACAATAT+TGG | + | chr1_3:73560312-73560331 | Msa0139720:intron | 35.0% |
| GTAGAAGGAATGATGAAATG+TGG | + | chr1_3:73560350-73560369 | Msa0139720:intron | 35.0% | |
| ATAAGCTTACATCAGATGGT+TGG | + | chr1_3:73560300-73560319 | Msa0139720:intron | 35.0% | |
| !! | CAGATGGTTGGTAACAATAT+TGG | + | chr1_3:73560312-73560331 | Msa0139720:intron | 35.0% |
| GTAGAAGGAATGATGAAATG+TGG | + | chr1_3:73560350-73560369 | Msa0139720:intron | 35.0% | |
| CATGCATTTGCACTATTTGT+TGG | + | chr1_3:73560819-73560838 | Msa0139720:CDS | 35.0% | |
| ! | ATTTGCACTATTTGTTGGTG+TGG | + | chr1_3:73560824-73560843 | Msa0139720:CDS | 35.0% |
| CTAATCCAAAAGTAACAGCT+GGG | - | chr1_3:73560884-73560903 | None:intergenic | 35.0% | |
| !!! | GTTACTTTTGGATTAGCCAT+TGG | + | chr1_3:73560888-73560907 | Msa0139720:CDS | 35.0% |
| !!! | TTTTAGGTTCAGGTGGTTAA+TGG | + | chr1_3:73561033-73561052 | Msa0139720:intron | 35.0% |
| !!! | CGGTTGATGACAAATTGTTT+TGG | + | chr1_3:73561059-73561078 | Msa0139720:intron | 35.0% |
| TTAGTTGAACTCCTGAACAT+CGG | + | chr1_3:73561139-73561158 | Msa0139720:intron | 35.0% | |
| !!! | CTCCAGTTTTAAATGGAAAG+GGG | - | chr1_3:73561167-73561186 | None:intergenic | 35.0% |
| !!! | CCTCCAGTTTTAAATGGAAA+GGG | - | chr1_3:73561168-73561187 | None:intergenic | 35.0% |
| !!! | TCCTCCAGTTTTAAATGGAA+AGG | - | chr1_3:73561169-73561188 | None:intergenic | 35.0% |
| CAAACACTAATCCAGCAATA+GGG | - | chr1_3:73561365-73561384 | None:intergenic | 35.0% | |
| TCAAACACTAATCCAGCAAT+AGG | - | chr1_3:73561366-73561385 | None:intergenic | 35.0% | |
| TTGCTGATAACTGGATCTAT+TGG | + | chr1_3:73561580-73561599 | Msa0139720:CDS | 35.0% | |
| TGCTGATAACTGGATCTATT+GGG | + | chr1_3:73561581-73561600 | Msa0139720:CDS | 35.0% | |
| AATAAAGAAAAGGGTGAGGG+TGG | + | chr1_3:73559457-73559476 | Msa0139720:five_prime_UTR | 40.0% | |
| ACAACTCATATGTCCATGGA+CGG | + | chr1_3:73559517-73559536 | Msa0139720:five_prime_UTR | 40.0% | |
| ATTGCCAAAATGGTGAAGGT+AGG | + | chr1_3:73559723-73559742 | Msa0139720:exon | 40.0% | |
| ! | TTTTAGCATTGCCTCCCTTA+AGG | + | chr1_3:73559767-73559786 | Msa0139720:CDS | 40.0% |
| TGATAGATAAGCCTTAAGGG+AGG | - | chr1_3:73559781-73559800 | None:intergenic | 40.0% | |
| AGCGAACACAAAAATCAGAG+TGG | - | chr1_3:73559814-73559833 | None:intergenic | 40.0% | |
| ! | ACTCTGATTTTTGTGTTCGC+TGG | + | chr1_3:73559813-73559832 | Msa0139720:CDS | 40.0% |
| ! | ATTTTTGTGTTCGCTGGAGT+TGG | + | chr1_3:73559819-73559838 | Msa0139720:CDS | 40.0% |
| AGACGTGACATAAATGAGGT+TGG | - | chr1_3:73560495-73560514 | None:intergenic | 40.0% | |
| ! | TCTGAGACGTGACATAAATG+AGG | - | chr1_3:73560499-73560518 | None:intergenic | 40.0% |
| !!! | TTGAACCCAGCTGTTACTTT+TGG | + | chr1_3:73560876-73560895 | Msa0139720:CDS | 40.0% |
| GCTAATCCAAAAGTAACAGC+TGG | - | chr1_3:73560885-73560904 | None:intergenic | 40.0% | |
| !!! | ACTTTTGGATTAGCCATTGG+AGG | + | chr1_3:73560891-73560910 | Msa0139720:CDS | 40.0% |
| ATAGAAGAGACCAGTTAGGA+TGG | - | chr1_3:73560925-73560944 | None:intergenic | 40.0% | |
| ! | TCCTAACTGGTCTCTTCTAT+TGG | + | chr1_3:73560925-73560944 | Msa0139720:CDS | 40.0% |
| TCCAATAGAAGAGACCAGTT+AGG | - | chr1_3:73560929-73560948 | None:intergenic | 40.0% | |
| TATTGGATTGCCCAATTGCT+TGG | + | chr1_3:73560942-73560961 | Msa0139720:CDS | 40.0% | |
| TAGCGGTGACATAATTTAGG+AGG | - | chr1_3:73560986-73561005 | None:intergenic | 40.0% | |
| CCTTAGCGGTGACATAATTT+AGG | - | chr1_3:73560989-73561008 | None:intergenic | 40.0% | |
| CCTAAATTATGTCACCGCTA+AGG | + | chr1_3:73560986-73561005 | Msa0139720:CDS | 40.0% | |
| GTTCAGGTGGTTAATGGTTT+CGG | + | chr1_3:73561039-73561058 | Msa0139720:intron | 40.0% | |
| TAGTTGAACTCCTGAACATC+GGG | + | chr1_3:73561140-73561159 | Msa0139720:intron | 40.0% | |
| ! | GACCCCTTTCCATTTAAAAC+TGG | + | chr1_3:73561162-73561181 | Msa0139720:intron | 40.0% |
| ! | CCCTTTCCATTTAAAACTGG+AGG | + | chr1_3:73561165-73561184 | Msa0139720:intron | 40.0% |
| ! | TTCCAATTGAGCCCTTTTTG+GGG | - | chr1_3:73561440-73561459 | None:intergenic | 40.0% |
| ! | GTTCCAATTGAGCCCTTTTT+GGG | - | chr1_3:73561441-73561460 | None:intergenic | 40.0% |
| ACAACGAACCCAATAGCAAT+CGG | - | chr1_3:73561471-73561490 | None:intergenic | 40.0% | |
| ! | ATTGCTATTGGGTTCGTTGT+CGG | + | chr1_3:73561471-73561490 | Msa0139720:CDS | 40.0% |
| TTCATTGAACCTCCACTGAA+TGG | - | chr1_3:73561519-73561538 | None:intergenic | 40.0% | |
| GTGGAAACTTTGCTGATAAC+TGG | + | chr1_3:73561571-73561590 | Msa0139720:CDS | 40.0% | |
| GATAACTGGATCTATTGGGT+TGG | + | chr1_3:73561585-73561604 | Msa0139720:CDS | 40.0% | |
| !! | TATTGGGTTGGACCATTGAT+AGG | + | chr1_3:73561597-73561616 | Msa0139720:CDS | 40.0% |
| ! | TAAGGGTATGTTTCAGATGC+TGG | - | chr1_3:73561681-73561700 | None:intergenic | 40.0% |
| AATAAAGAAAAGGGTGAGGG+TGG | + | chr1_3:73559457-73559476 | Msa0139720:five_prime_UTR | 40.0% | |
| ACAACTCATATGTCCATGGA+CGG | + | chr1_3:73559517-73559536 | Msa0139720:five_prime_UTR | 40.0% | |
| ATTGCCAAAATGGTGAAGGT+AGG | + | chr1_3:73559723-73559742 | Msa0139720:exon | 40.0% | |
| ! | TTTTAGCATTGCCTCCCTTA+AGG | + | chr1_3:73559767-73559786 | Msa0139720:CDS | 40.0% |
| TGATAGATAAGCCTTAAGGG+AGG | - | chr1_3:73559781-73559800 | None:intergenic | 40.0% | |
| AGCGAACACAAAAATCAGAG+TGG | - | chr1_3:73559814-73559833 | None:intergenic | 40.0% | |
| ! | ACTCTGATTTTTGTGTTCGC+TGG | + | chr1_3:73559813-73559832 | Msa0139720:CDS | 40.0% |
| ! | ATTTTTGTGTTCGCTGGAGT+TGG | + | chr1_3:73559819-73559838 | Msa0139720:CDS | 40.0% |
| AGACGTGACATAAATGAGGT+TGG | - | chr1_3:73560495-73560514 | None:intergenic | 40.0% | |
| ! | TCTGAGACGTGACATAAATG+AGG | - | chr1_3:73560499-73560518 | None:intergenic | 40.0% |
| !!! | TTGAACCCAGCTGTTACTTT+TGG | + | chr1_3:73560876-73560895 | Msa0139720:CDS | 40.0% |
| GCTAATCCAAAAGTAACAGC+TGG | - | chr1_3:73560885-73560904 | None:intergenic | 40.0% | |
| !!! | ACTTTTGGATTAGCCATTGG+AGG | + | chr1_3:73560891-73560910 | Msa0139720:CDS | 40.0% |
| ATAGAAGAGACCAGTTAGGA+TGG | - | chr1_3:73560925-73560944 | None:intergenic | 40.0% | |
| ! | TCCTAACTGGTCTCTTCTAT+TGG | + | chr1_3:73560925-73560944 | Msa0139720:CDS | 40.0% |
| TCCAATAGAAGAGACCAGTT+AGG | - | chr1_3:73560929-73560948 | None:intergenic | 40.0% | |
| TATTGGATTGCCCAATTGCT+TGG | + | chr1_3:73560942-73560961 | Msa0139720:CDS | 40.0% | |
| TAGCGGTGACATAATTTAGG+AGG | - | chr1_3:73560986-73561005 | None:intergenic | 40.0% | |
| CCTTAGCGGTGACATAATTT+AGG | - | chr1_3:73560989-73561008 | None:intergenic | 40.0% | |
| CCTAAATTATGTCACCGCTA+AGG | + | chr1_3:73560986-73561005 | Msa0139720:CDS | 40.0% | |
| GTTCAGGTGGTTAATGGTTT+CGG | + | chr1_3:73561039-73561058 | Msa0139720:intron | 40.0% | |
| TAGTTGAACTCCTGAACATC+GGG | + | chr1_3:73561140-73561159 | Msa0139720:intron | 40.0% | |
| ! | GACCCCTTTCCATTTAAAAC+TGG | + | chr1_3:73561162-73561181 | Msa0139720:intron | 40.0% |
| ! | CCCTTTCCATTTAAAACTGG+AGG | + | chr1_3:73561165-73561184 | Msa0139720:intron | 40.0% |
| ! | TTCCAATTGAGCCCTTTTTG+GGG | - | chr1_3:73561440-73561459 | None:intergenic | 40.0% |
| ! | GTTCCAATTGAGCCCTTTTT+GGG | - | chr1_3:73561441-73561460 | None:intergenic | 40.0% |
| ACAACGAACCCAATAGCAAT+CGG | - | chr1_3:73561471-73561490 | None:intergenic | 40.0% | |
| ! | ATTGCTATTGGGTTCGTTGT+CGG | + | chr1_3:73561471-73561490 | Msa0139720:CDS | 40.0% |
| TTCATTGAACCTCCACTGAA+TGG | - | chr1_3:73561519-73561538 | None:intergenic | 40.0% | |
| GTGGAAACTTTGCTGATAAC+TGG | + | chr1_3:73561571-73561590 | Msa0139720:CDS | 40.0% | |
| GATAACTGGATCTATTGGGT+TGG | + | chr1_3:73561585-73561604 | Msa0139720:CDS | 40.0% | |
| !! | TATTGGGTTGGACCATTGAT+AGG | + | chr1_3:73561597-73561616 | Msa0139720:CDS | 40.0% |
| ! | TAAGGGTATGTTTCAGATGC+TGG | - | chr1_3:73561681-73561700 | None:intergenic | 40.0% |
| GTTGGTCACTTATCATACGC+AGG | - | chr1_3:73560108-73560127 | None:intergenic | 45.0% | |
| AGACGTGGCATAAATGAGGT+TGG | - | chr1_3:73560126-73560145 | None:intergenic | 45.0% | |
| ! | TCTGAGACGTGGCATAAATG+AGG | - | chr1_3:73560130-73560149 | None:intergenic | 45.0% |
| ! | AAACACACATGTCTGAGACG+TGG | - | chr1_3:73560141-73560160 | None:intergenic | 45.0% |
| TCTAACATCAGATGCAGCCT+TGG | + | chr1_3:73560764-73560783 | Msa0139720:CDS | 45.0% | |
| ! | ACCTGAGATGTTTGCTGCTA+TGG | - | chr1_3:73560850-73560869 | None:intergenic | 45.0% |
| ATAGCAGCAAACATCTCAGG+TGG | + | chr1_3:73560849-73560868 | Msa0139720:CDS | 45.0% | |
| AACGATGGAGCCAAGCAATT+GGG | - | chr1_3:73560955-73560974 | None:intergenic | 45.0% | |
| !!! | AAATTGTTTTGGGAAGCCCG+AGG | + | chr1_3:73561070-73561089 | Msa0139720:intron | 45.0% |
| TTTCAGTCGAGATTTGGCCT+CGG | - | chr1_3:73561090-73561109 | None:intergenic | 45.0% | |
| ! | GGTTCCAATTGAGCCCTTTT+TGG | - | chr1_3:73561442-73561461 | None:intergenic | 45.0% |
| !! | ACCATTGCACCGATTGCTAT+TGG | + | chr1_3:73561459-73561478 | Msa0139720:CDS | 45.0% |
| !! | CCATTGCACCGATTGCTATT+GGG | + | chr1_3:73561460-73561479 | Msa0139720:CDS | 45.0% |
| AGTTTCCACTAACCACAGCT+GGG | - | chr1_3:73561560-73561579 | None:intergenic | 45.0% | |
| AAGTTTCCACTAACCACAGC+TGG | - | chr1_3:73561561-73561580 | None:intergenic | 45.0% | |
| ATGTTTCAGATGCTGGTGCT+GGG | - | chr1_3:73561674-73561693 | None:intergenic | 45.0% | |
| TATGTTTCAGATGCTGGTGC+TGG | - | chr1_3:73561675-73561694 | None:intergenic | 45.0% | |
| !!! | GCTTGCTGTCATGAACCTTT+TGG | + | chr1_3:73561752-73561771 | Msa0139720:three_prime_UTR | 45.0% |
| GTTGGTCACTTATCATACGC+AGG | - | chr1_3:73560108-73560127 | None:intergenic | 45.0% | |
| AGACGTGGCATAAATGAGGT+TGG | - | chr1_3:73560126-73560145 | None:intergenic | 45.0% | |
| ! | TCTGAGACGTGGCATAAATG+AGG | - | chr1_3:73560130-73560149 | None:intergenic | 45.0% |
| ! | AAACACACATGTCTGAGACG+TGG | - | chr1_3:73560141-73560160 | None:intergenic | 45.0% |
| TCTAACATCAGATGCAGCCT+TGG | + | chr1_3:73560764-73560783 | Msa0139720:CDS | 45.0% | |
| ! | ACCTGAGATGTTTGCTGCTA+TGG | - | chr1_3:73560850-73560869 | None:intergenic | 45.0% |
| ATAGCAGCAAACATCTCAGG+TGG | + | chr1_3:73560849-73560868 | Msa0139720:CDS | 45.0% | |
| AACGATGGAGCCAAGCAATT+GGG | - | chr1_3:73560955-73560974 | None:intergenic | 45.0% | |
| !!! | AAATTGTTTTGGGAAGCCCG+AGG | + | chr1_3:73561070-73561089 | Msa0139720:intron | 45.0% |
| TTTCAGTCGAGATTTGGCCT+CGG | - | chr1_3:73561090-73561109 | None:intergenic | 45.0% | |
| ! | GGTTCCAATTGAGCCCTTTT+TGG | - | chr1_3:73561442-73561461 | None:intergenic | 45.0% |
| !! | ACCATTGCACCGATTGCTAT+TGG | + | chr1_3:73561459-73561478 | Msa0139720:CDS | 45.0% |
| !! | CCATTGCACCGATTGCTATT+GGG | + | chr1_3:73561460-73561479 | Msa0139720:CDS | 45.0% |
| AGTTTCCACTAACCACAGCT+GGG | - | chr1_3:73561560-73561579 | None:intergenic | 45.0% | |
| AAGTTTCCACTAACCACAGC+TGG | - | chr1_3:73561561-73561580 | None:intergenic | 45.0% | |
| ATGTTTCAGATGCTGGTGCT+GGG | - | chr1_3:73561674-73561693 | None:intergenic | 45.0% | |
| TATGTTTCAGATGCTGGTGC+TGG | - | chr1_3:73561675-73561694 | None:intergenic | 45.0% | |
| !!! | GCTTGCTGTCATGAACCTTT+TGG | + | chr1_3:73561752-73561771 | Msa0139720:three_prime_UTR | 45.0% |
| ! | AAGGGTGAGGGTGGTTAGTT+AGG | + | chr1_3:73559466-73559485 | Msa0139720:five_prime_UTR | 50.0% |
| ATATGTCCATGGACGGTGCA+AGG | + | chr1_3:73559524-73559543 | Msa0139720:five_prime_UTR | 50.0% | |
| TATGTCCATGGACGGTGCAA+GGG | + | chr1_3:73559525-73559544 | Msa0139720:five_prime_UTR | 50.0% | |
| GCCATAGCAGCAAACATCTC+AGG | + | chr1_3:73560846-73560865 | Msa0139720:CDS | 50.0% | |
| ! | GATGGTGATGTTGCCTCCAA+TGG | - | chr1_3:73560907-73560926 | None:intergenic | 50.0% |
| GGCAACATCACCATCCTAAC+TGG | + | chr1_3:73560912-73560931 | Msa0139720:CDS | 50.0% | |
| CAACGATGGAGCCAAGCAAT+TGG | - | chr1_3:73560956-73560975 | None:intergenic | 50.0% | |
| TAGGAGGAGACATGCAACGA+TGG | - | chr1_3:73560970-73560989 | None:intergenic | 50.0% | |
| TTCAGTCGAGATTTGGCCTC+GGG | - | chr1_3:73561089-73561108 | None:intergenic | 50.0% | |
| ! | TTGCAGAGTGTTCCAACCCA+TGG | + | chr1_3:73561321-73561340 | Msa0139720:intron | 50.0% |
| ACAGCAGCTGACCCCAAAAA+GGG | + | chr1_3:73561426-73561445 | Msa0139720:CDS | 50.0% | |
| GACCCCAAAAAGGGCTCAAT+TGG | + | chr1_3:73561435-73561454 | Msa0139720:CDS | 50.0% | |
| CCCAATAGCAATCGGTGCAA+TGG | - | chr1_3:73561463-73561482 | None:intergenic | 50.0% | |
| TGAACCTCCACTGAATGGAC+CGG | - | chr1_3:73561514-73561533 | None:intergenic | 50.0% | |
| CAGTGGAGGTTCAATGAACC+CGG | + | chr1_3:73561521-73561540 | Msa0139720:CDS | 50.0% | |
| ! | TGGGTTGGACCATTGATAGG+AGG | + | chr1_3:73561600-73561619 | Msa0139720:CDS | 50.0% |
| GTTGGACCATTGATAGGAGG+AGG | + | chr1_3:73561603-73561622 | Msa0139720:CDS | 50.0% | |
| ACCATTGATAGGAGGAGGCT+TGG | + | chr1_3:73561608-73561627 | Msa0139720:CDS | 50.0% | |
| !! | GGCTTGGCTGGGTTGATTTA+TGG | + | chr1_3:73561624-73561643 | Msa0139720:CDS | 50.0% |
| ! | TGTTTCAGATGCTGGTGCTG+GGG | - | chr1_3:73561673-73561692 | None:intergenic | 50.0% |
| ! | AAGGGTGAGGGTGGTTAGTT+AGG | + | chr1_3:73559466-73559485 | Msa0139720:five_prime_UTR | 50.0% |
| ATATGTCCATGGACGGTGCA+AGG | + | chr1_3:73559524-73559543 | Msa0139720:five_prime_UTR | 50.0% | |
| TATGTCCATGGACGGTGCAA+GGG | + | chr1_3:73559525-73559544 | Msa0139720:five_prime_UTR | 50.0% | |
| GCCATAGCAGCAAACATCTC+AGG | + | chr1_3:73560846-73560865 | Msa0139720:CDS | 50.0% | |
| ! | GATGGTGATGTTGCCTCCAA+TGG | - | chr1_3:73560907-73560926 | None:intergenic | 50.0% |
| GGCAACATCACCATCCTAAC+TGG | + | chr1_3:73560912-73560931 | Msa0139720:CDS | 50.0% | |
| CAACGATGGAGCCAAGCAAT+TGG | - | chr1_3:73560956-73560975 | None:intergenic | 50.0% | |
| TAGGAGGAGACATGCAACGA+TGG | - | chr1_3:73560970-73560989 | None:intergenic | 50.0% | |
| TTCAGTCGAGATTTGGCCTC+GGG | - | chr1_3:73561089-73561108 | None:intergenic | 50.0% | |
| ! | TTGCAGAGTGTTCCAACCCA+TGG | + | chr1_3:73561321-73561340 | Msa0139720:intron | 50.0% |
| ACAGCAGCTGACCCCAAAAA+GGG | + | chr1_3:73561426-73561445 | Msa0139720:CDS | 50.0% | |
| GACCCCAAAAAGGGCTCAAT+TGG | + | chr1_3:73561435-73561454 | Msa0139720:CDS | 50.0% | |
| CCCAATAGCAATCGGTGCAA+TGG | - | chr1_3:73561463-73561482 | None:intergenic | 50.0% | |
| TGAACCTCCACTGAATGGAC+CGG | - | chr1_3:73561514-73561533 | None:intergenic | 50.0% | |
| CAGTGGAGGTTCAATGAACC+CGG | + | chr1_3:73561521-73561540 | Msa0139720:CDS | 50.0% | |
| ! | TGGGTTGGACCATTGATAGG+AGG | + | chr1_3:73561600-73561619 | Msa0139720:CDS | 50.0% |
| GTTGGACCATTGATAGGAGG+AGG | + | chr1_3:73561603-73561622 | Msa0139720:CDS | 50.0% | |
| ACCATTGATAGGAGGAGGCT+TGG | + | chr1_3:73561608-73561627 | Msa0139720:CDS | 50.0% | |
| !! | GGCTTGGCTGGGTTGATTTA+TGG | + | chr1_3:73561624-73561643 | Msa0139720:CDS | 50.0% |
| ! | TGTTTCAGATGCTGGTGCTG+GGG | - | chr1_3:73561673-73561692 | None:intergenic | 50.0% |
| AGATGCAGCCTTGGATCCAG+CGG | + | chr1_3:73560773-73560792 | Msa0139720:CDS | 55.0% | |
| CACTAAACCCGCTGGATCCA+AGG | - | chr1_3:73560784-73560803 | None:intergenic | 55.0% | |
| ! | CTTGGATCCAGCGGGTTTAG+TGG | + | chr1_3:73560782-73560801 | Msa0139720:CDS | 55.0% |
| GGGTTTAGTGGCAGTAGCTG+TGG | + | chr1_3:73560794-73560813 | Msa0139720:CDS | 55.0% | |
| GAGTGTTCCAACCCATGGAG+TGG | + | chr1_3:73561326-73561345 | Msa0139720:intron | 55.0% | |
| GCTGGACTGAACCCTATTGC+TGG | + | chr1_3:73561351-73561370 | Msa0139720:CDS | 55.0% | |
| !!! | CTTTTTGGGGTCAGCTGCTG+TGG | - | chr1_3:73561427-73561446 | None:intergenic | 55.0% |
| CACAGCAGCTGACCCCAAAA+AGG | + | chr1_3:73561425-73561444 | Msa0139720:CDS | 55.0% | |
| GGAGCTAACATCTTAGCCGC+CGG | + | chr1_3:73561492-73561511 | Msa0139720:CDS | 55.0% | |
| ! | ATGAACCCGGCTCGCTCATT+CGG | + | chr1_3:73561534-73561553 | Msa0139720:CDS | 55.0% |
| GCCAAGCCTCCTCCTATCAA+TGG | - | chr1_3:73561612-73561631 | None:intergenic | 55.0% | |
| TTGATAGGAGGAGGCTTGGC+TGG | + | chr1_3:73561612-73561631 | Msa0139720:CDS | 55.0% | |
| TGATAGGAGGAGGCTTGGCT+GGG | + | chr1_3:73561613-73561632 | Msa0139720:CDS | 55.0% | |
| AGATGCAGCCTTGGATCCAG+CGG | + | chr1_3:73560773-73560792 | Msa0139720:CDS | 55.0% | |
| CACTAAACCCGCTGGATCCA+AGG | - | chr1_3:73560784-73560803 | None:intergenic | 55.0% | |
| ! | CTTGGATCCAGCGGGTTTAG+TGG | + | chr1_3:73560782-73560801 | Msa0139720:CDS | 55.0% |
| GGGTTTAGTGGCAGTAGCTG+TGG | + | chr1_3:73560794-73560813 | Msa0139720:CDS | 55.0% | |
| GAGTGTTCCAACCCATGGAG+TGG | + | chr1_3:73561326-73561345 | Msa0139720:intron | 55.0% | |
| GCTGGACTGAACCCTATTGC+TGG | + | chr1_3:73561351-73561370 | Msa0139720:CDS | 55.0% | |
| !!! | CTTTTTGGGGTCAGCTGCTG+TGG | - | chr1_3:73561427-73561446 | None:intergenic | 55.0% |
| CACAGCAGCTGACCCCAAAA+AGG | + | chr1_3:73561425-73561444 | Msa0139720:CDS | 55.0% | |
| GGAGCTAACATCTTAGCCGC+CGG | + | chr1_3:73561492-73561511 | Msa0139720:CDS | 55.0% | |
| ! | ATGAACCCGGCTCGCTCATT+CGG | + | chr1_3:73561534-73561553 | Msa0139720:CDS | 55.0% |
| GCCAAGCCTCCTCCTATCAA+TGG | - | chr1_3:73561612-73561631 | None:intergenic | 55.0% | |
| TTGATAGGAGGAGGCTTGGC+TGG | + | chr1_3:73561612-73561631 | Msa0139720:CDS | 55.0% | |
| TGATAGGAGGAGGCTTGGCT+GGG | + | chr1_3:73561613-73561632 | Msa0139720:CDS | 55.0% | |
| TGTTGCCCTTGCACCGTCCA+TGG | - | chr1_3:73559533-73559552 | None:intergenic | 60.0% | |
| GATGCAGCCTTGGATCCAGC+GGG | + | chr1_3:73560774-73560793 | Msa0139720:CDS | 60.0% | |
| GCTACTGCCACTAAACCCGC+TGG | - | chr1_3:73560792-73560811 | None:intergenic | 60.0% | |
| GGAAAGGGGTCCCGATGTTC+AGG | - | chr1_3:73561153-73561172 | None:intergenic | 60.0% | |
| CAGTCCAGCAGCCACTCCAT+GGG | - | chr1_3:73561340-73561359 | None:intergenic | 60.0% | |
| TCAGTCCAGCAGCCACTCCA+TGG | - | chr1_3:73561341-73561360 | None:intergenic | 60.0% | |
| TTAGCCGCCGGTCCATTCAG+TGG | + | chr1_3:73561504-73561523 | Msa0139720:CDS | 60.0% | |
| ACCTCCACTGAATGGACCGG+CGG | - | chr1_3:73561511-73561530 | None:intergenic | 60.0% | |
| TTCGGCCCAGCTGTGGTTAG+TGG | + | chr1_3:73561552-73561571 | Msa0139720:CDS | 60.0% | |
| TGTTGCCCTTGCACCGTCCA+TGG | - | chr1_3:73559533-73559552 | None:intergenic | 60.0% | |
| GATGCAGCCTTGGATCCAGC+GGG | + | chr1_3:73560774-73560793 | Msa0139720:CDS | 60.0% | |
| GCTACTGCCACTAAACCCGC+TGG | - | chr1_3:73560792-73560811 | None:intergenic | 60.0% | |
| GGAAAGGGGTCCCGATGTTC+AGG | - | chr1_3:73561153-73561172 | None:intergenic | 60.0% | |
| CAGTCCAGCAGCCACTCCAT+GGG | - | chr1_3:73561340-73561359 | None:intergenic | 60.0% | |
| TCAGTCCAGCAGCCACTCCA+TGG | - | chr1_3:73561341-73561360 | None:intergenic | 60.0% | |
| TTAGCCGCCGGTCCATTCAG+TGG | + | chr1_3:73561504-73561523 | Msa0139720:CDS | 60.0% | |
| ACCTCCACTGAATGGACCGG+CGG | - | chr1_3:73561511-73561530 | None:intergenic | 60.0% | |
| TTCGGCCCAGCTGTGGTTAG+TGG | + | chr1_3:73561552-73561571 | Msa0139720:CDS | 60.0% | |
| CCAGCAGCCACTCCATGGGT+TGG | - | chr1_3:73561336-73561355 | None:intergenic | 65.0% | |
| CCAACCCATGGAGTGGCTGC+TGG | + | chr1_3:73561333-73561352 | Msa0139720:CDS | 65.0% | |
| TCGCTCATTCGGCCCAGCTG+TGG | + | chr1_3:73561545-73561564 | Msa0139720:CDS | 65.0% | |
| CCAGCAGCCACTCCATGGGT+TGG | - | chr1_3:73561336-73561355 | None:intergenic | 65.0% | |
| CCAACCCATGGAGTGGCTGC+TGG | + | chr1_3:73561333-73561352 | Msa0139720:CDS | 65.0% | |
| TCGCTCATTCGGCCCAGCTG+TGG | + | chr1_3:73561545-73561564 | Msa0139720:CDS | 65.0% | |
| GCCGCCGGTCCATTCAGTGG+AGG | + | chr1_3:73561507-73561526 | Msa0139720:CDS | 70.0% | |
| CTGGGCCGAATGAGCGAGCC+GGG | - | chr1_3:73561542-73561561 | None:intergenic | 70.0% | |
| GCTGGGCCGAATGAGCGAGC+CGG | - | chr1_3:73561543-73561562 | None:intergenic | 70.0% | |
| GCCGCCGGTCCATTCAGTGG+AGG | + | chr1_3:73561507-73561526 | Msa0139720:CDS | 70.0% | |
| CTGGGCCGAATGAGCGAGCC+GGG | - | chr1_3:73561542-73561561 | None:intergenic | 70.0% | |
| GCTGGGCCGAATGAGCGAGC+CGG | - | chr1_3:73561543-73561562 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 73559453 | 73561852 | 73559453 | ID=Msa0139720;Name=Msa0139720 |
| chr1_3 | mRNA | 73559453 | 73561852 | 73559453 | ID=Msa0139720-mRNA-1;Parent=Msa0139720;Name=Msa0139720-mRNA-1;_AED=0.02;_eAED=0.02;_QI=279|1|1|1|1|1|3|151|249 |
| chr1_3 | exon | 73559453 | 73559858 | 73559453 | ID=Msa0139720-mRNA-1:exon:25596;Parent=Msa0139720-mRNA-1 |
| chr1_3 | exon | 73560760 | 73561007 | 73560760 | ID=Msa0139720-mRNA-1:exon:25597;Parent=Msa0139720-mRNA-1 |
| chr1_3 | exon | 73561327 | 73561852 | 73561327 | ID=Msa0139720-mRNA-1:exon:25598;Parent=Msa0139720-mRNA-1 |
| chr1_3 | five_prime_UTR | 73559453 | 73559731 | 73559453 | ID=Msa0139720-mRNA-1:five_prime_utr;Parent=Msa0139720-mRNA-1 |
| chr1_3 | CDS | 73559732 | 73559858 | 73559732 | ID=Msa0139720-mRNA-1:cds;Parent=Msa0139720-mRNA-1 |
| chr1_3 | CDS | 73560760 | 73561007 | 73560760 | ID=Msa0139720-mRNA-1:cds;Parent=Msa0139720-mRNA-1 |
| chr1_3 | CDS | 73561327 | 73561701 | 73561327 | ID=Msa0139720-mRNA-1:cds;Parent=Msa0139720-mRNA-1 |
| chr1_3 | three_prime_UTR | 73561702 | 73561852 | 73561702 | ID=Msa0139720-mRNA-1:three_prime_utr;Parent=Msa0139720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
