Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0623950 | Msa1191700 | 0.953008 | 7.036553e-111 | -8.615850e-47 |
| Msa0623950 | Msa1404200 | 0.922832 | 5.881406e-89 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0623950 | MtrunA17_Chr2g0307141 | 45.588 | 136 | 41 | 4 | 1 | 103 | 225 | 360 | 4.01e-22 | 88.6 |
| Msa0623950 | MtrunA17_Chr2g0307131 | 42.222 | 135 | 45 | 4 | 1 | 102 | 221 | 355 | 9.54e-19 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 16 sgRNAs with CRISPR-Local
Find 559 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATGAACTTGAAAAGCGTT+TGG | 0.404274 | 4_3:+1745857 | Msa0623950:CDS |
| TTATGCAATTCCACATGAAA+TGG | 0.413126 | 4_3:-1745996 | None:intergenic |
| CCGTCATTGCTGCAGAGGTT+TGG | 0.423224 | 4_3:-1755545 | None:intergenic |
| TCATTTGATGAGAGCATTGA+AGG | 0.427338 | 4_3:+1745960 | Msa0623950:CDS |
| ATTGCTGCAGAGGTTTGGTT+TGG | 0.454544 | 4_3:-1755540 | None:intergenic |
| TCATTTGATGAGAACATTGA+AGG | 0.468182 | 4_3:+1755575 | Msa0623950:CDS |
| ATCGCTACAGAGGTCTGGTT+TGG | 0.482022 | 4_3:-1745925 | None:intergenic |
| GAGAGCATTGAAGGTGTTGT+TGG | 0.490602 | 4_3:+1745969 | Msa0623950:CDS |
| TCGTCATCGCTACAGAGGTC+TGG | 0.520023 | 4_3:-1745930 | None:intergenic |
| AGGCAACAACTTGAGCATAA+AGG | 0.528487 | 4_3:+1756078 | Msa0623950:CDS |
| CCAAACCTCTGCAGCAATGA+CGG | 0.528577 | 4_3:+1755545 | Msa0623950:CDS |
| AGGAACCGTCATTGCTGCAG+AGG | 0.588862 | 4_3:-1755550 | None:intergenic |
| ACTTCAATGTTGTCATGCGT+AGG | 0.604852 | 4_3:-1756114 | None:intergenic |
| AGGAATCGTCATCGCTACAG+AGG | 0.620384 | 4_3:-1745935 | None:intergenic |
| AATGCTCTCATCAAATGACG+AGG | 0.687926 | 4_3:-1745955 | None:intergenic |
| AATGTTCTCATCAAATGACG+AGG | 0.702664 | 4_3:-1755570 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAAGTATTTTTTATTCT+AGG | + | chr4_3:1746405-1746424 | Msa0623950:intron | 10.0% |
| !!! | AATCTTATTTATTTTATAGT+TGG | + | chr4_3:1746526-1746545 | Msa0623950:intron | 10.0% |
| !!! | ATCTTATTTATTTTATAGTT+GGG | + | chr4_3:1746527-1746546 | Msa0623950:intron | 10.0% |
| !! | AACTGAATTTAAAAAAAAAA+CGG | - | chr4_3:1746884-1746903 | None:intergenic | 10.0% |
| !!! | TAATCAAAAGTATAAATTAA+TGG | + | chr4_3:1748412-1748431 | Msa0623950:intron | 10.0% |
| !! | TGAATTATTTGAATATATTA+AGG | + | chr4_3:1748787-1748806 | Msa0623950:intron | 10.0% |
| !!! | TTTTATATATTTGATTCAAA+GGG | - | chr4_3:1749296-1749315 | None:intergenic | 10.0% |
| !!! | TTTTTATATATTTGATTCAA+AGG | - | chr4_3:1749297-1749316 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAACAAAGAA+GGG | - | chr4_3:1749474-1749493 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAACAAAGA+AGG | - | chr4_3:1749475-1749494 | None:intergenic | 10.0% |
| !!! | TATTTTTAAATTTTGAAACT+TGG | + | chr4_3:1749536-1749555 | Msa0623950:intron | 10.0% |
| !!! | ATTTTTAAATTTTGAAACTT+GGG | + | chr4_3:1749537-1749556 | Msa0623950:intron | 10.0% |
| !! | TATTGCAAATTAAAATAATA+TGG | + | chr4_3:1750243-1750262 | Msa0623950:intron | 10.0% |
| !! | ATTATACTGAATAAAAATAA+AGG | - | chr4_3:1751161-1751180 | None:intergenic | 10.0% |
| !!! | ATTATGTTACTTAAAATAAA+TGG | - | chr4_3:1751872-1751891 | None:intergenic | 10.0% |
| !!! | TTATATATAATTAACACTTT+TGG | - | chr4_3:1752519-1752538 | None:intergenic | 10.0% |
| !! | TAGATAATTAAAGATATTAA+CGG | + | chr4_3:1753326-1753345 | Msa0623950:intron | 10.0% |
| !!! | AATTTGCTTATAATTAAAAA+TGG | + | chr4_3:1753530-1753549 | Msa0623950:intron | 10.0% |
| !!! | AATTTGTTTAAAAGTATATT+TGG | + | chr4_3:1753850-1753869 | Msa0623950:intron | 10.0% |
| !! | TAAATAAAGATTAATTTCAT+AGG | - | chr4_3:1754407-1754426 | None:intergenic | 10.0% |
| !!! | AAATTTTGTAAGTTTTAAAT+AGG | + | chr4_3:1754650-1754669 | Msa0623950:intron | 10.0% |
| !! | TTTCAAATATGTTATTAAAA+GGG | + | chr4_3:1754697-1754716 | Msa0623950:intron | 10.0% |
| !!! | AATCTTTTTTTAGTTATTAT+TGG | + | chr4_3:1755866-1755885 | Msa0623950:intron | 10.0% |
| !!! | TAAAATAAATATTTTGTTCT+AGG | + | chr4_3:1755932-1755951 | Msa0623950:intron | 10.0% |
| !! | AAGATTGATATTAAATATAA+TGG | - | chr4_3:1756037-1756056 | None:intergenic | 10.0% |
| !! | AATATATCTAGCAAATATAA+TGG | - | chr4_3:1746438-1746457 | None:intergenic | 15.0% |
| !!! | ATTTTGTTGTCTTTTTATTT+TGG | + | chr4_3:1746459-1746478 | Msa0623950:intron | 15.0% |
| !!! | TTTTGTTGTCTTTTTATTTT+GGG | + | chr4_3:1746460-1746479 | Msa0623950:intron | 15.0% |
| !!! | TTTTTTAAATTCAGTTAAGA+AGG | + | chr4_3:1746888-1746907 | Msa0623950:intron | 15.0% |
| !!! | AATTACTTTGTTATTTCATT+TGG | + | chr4_3:1747329-1747348 | Msa0623950:intron | 15.0% |
| !! | AAAAATTCTTAGTCTAAAAA+AGG | + | chr4_3:1747722-1747741 | Msa0623950:intron | 15.0% |
| !! | ACCAAAAAAAAAAAGTAAAT+TGG | + | chr4_3:1749251-1749270 | Msa0623950:intron | 15.0% |
| !!! | ACCAATTTACTTTTTTTTTT+TGG | - | chr4_3:1749255-1749274 | None:intergenic | 15.0% |
| !! | TTTATATATTTGATTCAAAG+GGG | - | chr4_3:1749295-1749314 | None:intergenic | 15.0% |
| !! | TTCAAAATTTAAAAATAGCA+TGG | - | chr4_3:1749533-1749552 | None:intergenic | 15.0% |
| !!! | TCATTTATTTATTTTCTATG+TGG | + | chr4_3:1749680-1749699 | Msa0623950:intron | 15.0% |
| !!! | CATTTATTTATTTTCTATGT+GGG | + | chr4_3:1749681-1749700 | Msa0623950:intron | 15.0% |
| !! | TATTTACTTGTAAAGAAAAT+AGG | + | chr4_3:1749796-1749815 | Msa0623950:intron | 15.0% |
| !!! | AAAATGCTAAGTTAATTTTA+GGG | - | chr4_3:1749883-1749902 | None:intergenic | 15.0% |
| !! | GTTTGGAAAATAAAATAATA+TGG | + | chr4_3:1750079-1750098 | Msa0623950:intron | 15.0% |
| !! | AAATGTTAGAATTTATTATG+TGG | - | chr4_3:1750617-1750636 | None:intergenic | 15.0% |
| !!! | AATTAGAAATTTCTAAAACA+TGG | - | chr4_3:1750966-1750985 | None:intergenic | 15.0% |
| !!! | TGTTTTAGAAATTTCTAATT+TGG | + | chr4_3:1750966-1750985 | Msa0623950:intron | 15.0% |
| !!! | GTTTTAGAAATTTCTAATTT+GGG | + | chr4_3:1750967-1750986 | Msa0623950:intron | 15.0% |
| !! | ATATTGAATAAAAATAAAGG+TGG | - | chr4_3:1751326-1751345 | None:intergenic | 15.0% |
| !!! | GATTTTTATAAACTCTAAAT+GGG | - | chr4_3:1751971-1751990 | None:intergenic | 15.0% |
| !!! | TGATTTTTATAAACTCTAAA+TGG | - | chr4_3:1751972-1751991 | None:intergenic | 15.0% |
| !!! | TGACAATTATTTTTTACAAA+TGG | + | chr4_3:1752353-1752372 | Msa0623950:intron | 15.0% |
| !! | TGCTATATTAAATAAGTTTA+AGG | - | chr4_3:1752495-1752514 | None:intergenic | 15.0% |
| !! | AAAAAATTCAAGTAAATGAA+AGG | + | chr4_3:1752915-1752934 | Msa0623950:intron | 15.0% |
| !! | AAAAATTCAAGTAAATGAAA+GGG | + | chr4_3:1752916-1752935 | Msa0623950:intron | 15.0% |
| !! | TATACATTAGTTAAAAAGTA+TGG | - | chr4_3:1753221-1753240 | None:intergenic | 15.0% |
| !! | TATTATATCTGTTATATTGT+TGG | - | chr4_3:1753779-1753798 | None:intergenic | 15.0% |
| !! | AGGCTAATTATATTTATATT+TGG | + | chr4_3:1753983-1754002 | Msa0623950:intron | 15.0% |
| !!! | AATTATTTTAGTTAACTGAT+AGG | + | chr4_3:1754012-1754031 | Msa0623950:intron | 15.0% |
| !!! | ATATATAGATTAAAGGTATT+AGG | - | chr4_3:1754288-1754307 | None:intergenic | 15.0% |
| !! | CTATCAAATATATAGATTAA+AGG | - | chr4_3:1754295-1754314 | None:intergenic | 15.0% |
| !! | AAACAAAAAGTAATAATTAG+AGG | - | chr4_3:1754370-1754389 | None:intergenic | 15.0% |
| !!! | GATATTTTTGTCAAATTTAA+TGG | - | chr4_3:1754588-1754607 | None:intergenic | 15.0% |
| !! | GTTTCAAATATGTTATTAAA+AGG | + | chr4_3:1754696-1754715 | Msa0623950:intron | 15.0% |
| !!! | ATTGTTTTGTAGTAAAAAAA+AGG | - | chr4_3:1754993-1755012 | None:intergenic | 15.0% |
| !!! | ATGAGCATAATTTTTTTATA+AGG | + | chr4_3:1755131-1755150 | Msa0623950:intron | 15.0% |
| !!! | TTCATTTTGTTTGTATTTTT+CGG | + | chr4_3:1755188-1755207 | Msa0623950:intron | 15.0% |
| !! | TGAAAATATGTTAGATAAAT+AGG | + | chr4_3:1755412-1755431 | Msa0623950:intron | 15.0% |
| !!! | TTTTTTTTTGAAGTAGTTAT+TGG | + | chr4_3:1755892-1755911 | Msa0623950:intron | 15.0% |
| !! | AATATATCAAGCAAAAATAA+TGG | - | chr4_3:1755965-1755984 | None:intergenic | 15.0% |
| !!! | ATTTTGTTGTCTTTTTATTT+TGG | + | chr4_3:1746459-1746478 | Msa0623950:intron | 15.0% |
| !!! | AATCTTAATTATTTTAGAGT+TGG | + | chr4_3:1756051-1756070 | Msa0623950:intron | 15.0% |
| !!! | ATCTTAATTATTTTAGAGTT+GGG | + | chr4_3:1756052-1756071 | Msa0623950:intron | 15.0% |
| !!! | TATGGAAATATATGTTGATT+TGG | + | chr4_3:1746023-1746042 | Msa0623950:intron | 20.0% |
| !!! | TTTGTTGTCTTTTTATTTTG+GGG | + | chr4_3:1746461-1746480 | Msa0623950:intron | 20.0% |
| !!! | TAATTAAAAAGCATGAGAAA+AGG | - | chr4_3:1747189-1747208 | None:intergenic | 20.0% |
| !! | CTAGAACATATGATTATATA+GGG | - | chr4_3:1747213-1747232 | None:intergenic | 20.0% |
| !!! | TCTAGAACATATGATTATAT+AGG | - | chr4_3:1747214-1747233 | None:intergenic | 20.0% |
| !! | TTTCCTATAAATTGATCATT+AGG | + | chr4_3:1747370-1747389 | Msa0623950:intron | 20.0% |
| !!! | TGATTTTCTCTTTTTTCATA+TGG | + | chr4_3:1747616-1747635 | Msa0623950:intron | 20.0% |
| !!! | AGAATTTTTTTCAATGATTC+TGG | - | chr4_3:1747711-1747730 | None:intergenic | 20.0% |
| !!! | TTTTTGTGAGTAATTTTGAT+CGG | - | chr4_3:1747906-1747925 | None:intergenic | 20.0% |
| !!! | ACATGTTTTTCAAAGAATTT+CGG | - | chr4_3:1748290-1748309 | None:intergenic | 20.0% |
| !! | AAAGATTGTATTCAAAAGAA+CGG | - | chr4_3:1748550-1748569 | None:intergenic | 20.0% |
| !! | TAAGAAGAATAATGAAACAT+GGG | - | chr4_3:1748593-1748612 | None:intergenic | 20.0% |
| !! | CAACTAAAGTATAATGAATA+TGG | - | chr4_3:1748750-1748769 | None:intergenic | 20.0% |
| !! | CTAAGAATAAAACAGTAAAT+TGG | + | chr4_3:1749208-1749227 | Msa0623950:intron | 20.0% |
| !! | TCTATTCTAGATAAACAATA+AGG | - | chr4_3:1749346-1749365 | None:intergenic | 20.0% |
| !!! | TGAAGTACTATTGTAATATA+TGG | + | chr4_3:1749372-1749391 | Msa0623950:intron | 20.0% |
| !! | AGTACTTAAGCTATATTTAT+TGG | + | chr4_3:1749430-1749449 | Msa0623950:intron | 20.0% |
| !!! | AATATACTTTTTCAAGCAAA+AGG | + | chr4_3:1749585-1749604 | Msa0623950:intron | 20.0% |
| !!! | ATTTGATTTTCTTAGTTATG+TGG | + | chr4_3:1749634-1749653 | Msa0623950:intron | 20.0% |
| !!! | GAAAATGCTAAGTTAATTTT+AGG | - | chr4_3:1749884-1749903 | None:intergenic | 20.0% |
| !! | CCTGAATTTAAATGTATTTA+TGG | - | chr4_3:1749962-1749981 | None:intergenic | 20.0% |
| !! | CCATAAATACATTTAAATTC+AGG | + | chr4_3:1749959-1749978 | Msa0623950:intron | 20.0% |
| !! | CCTGAATTTAAATGAATTTA+TGG | - | chr4_3:1750024-1750043 | None:intergenic | 20.0% |
| !! | CCATAAATTCATTTAAATTC+AGG | + | chr4_3:1750021-1750040 | Msa0623950:intron | 20.0% |
| !! | AACATTTCAATAATAGAACA+CGG | + | chr4_3:1750106-1750125 | Msa0623950:intron | 20.0% |
| !!! | GTTGCAAATTTTCAATAATA+TGG | + | chr4_3:1750149-1750168 | Msa0623950:intron | 20.0% |
| !! | GTAAAAATTAGGGTTAATTA+GGG | - | chr4_3:1750316-1750335 | None:intergenic | 20.0% |
| !! | AAAAAGCTAGGTAAAAATTA+GGG | - | chr4_3:1750326-1750345 | None:intergenic | 20.0% |
| !!! | ATTTTCAGATTTGATATGAA+TGG | - | chr4_3:1750527-1750546 | None:intergenic | 20.0% |
| !! | TAGAATTTATTATGTGGTAA+AGG | - | chr4_3:1750611-1750630 | None:intergenic | 20.0% |
| !!! | TTAAATGAGGAGAAATTTTT+TGG | - | chr4_3:1750687-1750706 | None:intergenic | 20.0% |
| !! | AAATGTTAGAATTTATTGTG+TGG | - | chr4_3:1750762-1750781 | None:intergenic | 20.0% |
| !!! | AAATGTGTGTTTTTTTTTTG+AGG | + | chr4_3:1750906-1750925 | Msa0623950:intron | 20.0% |
| !! | ATACTGAATAAAAATAAAGG+TGG | - | chr4_3:1751158-1751177 | None:intergenic | 20.0% |
| !! | TAAATAAGTTAAACGAAGTT+TGG | + | chr4_3:1751443-1751462 | Msa0623950:intron | 20.0% |
| !! | ACATAATATATAGTTTAAGC+AGG | + | chr4_3:1751596-1751615 | Msa0623950:intron | 20.0% |
| !! | CAACTAACTTACATTAAAAA+AGG | - | chr4_3:1751802-1751821 | None:intergenic | 20.0% |
| !!! | CTTTTTTAATGTAAGTTAGT+TGG | + | chr4_3:1751800-1751819 | Msa0623950:intron | 20.0% |
| !! | AGTAATTTAATAGTTCCATA+AGG | - | chr4_3:1752157-1752176 | None:intergenic | 20.0% |
| !! | ATAAGTTATATCGTCTAATT+GGG | - | chr4_3:1752184-1752203 | None:intergenic | 20.0% |
| !! | AATAAGTTATATCGTCTAAT+TGG | - | chr4_3:1752185-1752204 | None:intergenic | 20.0% |
| !! | ATAATACATTCAATTGCAAA+TGG | + | chr4_3:1752765-1752784 | Msa0623950:intron | 20.0% |
| !!! | TGAATTTTTTTCAATGATTC+TGG | - | chr4_3:1752905-1752924 | None:intergenic | 20.0% |
| !! | GTTGAAATTTACTTGAAATT+TGG | - | chr4_3:1752969-1752988 | None:intergenic | 20.0% |
| !!! | AAATAATGGAAAATGTTAAC+CGG | + | chr4_3:1753420-1753439 | Msa0623950:intron | 20.0% |
| !!! | AGGAAGTACTAATTATTTAA+GGG | - | chr4_3:1753472-1753491 | None:intergenic | 20.0% |
| !! | TTGTTTATAATTAAAAACGG+AGG | - | chr4_3:1753492-1753511 | None:intergenic | 20.0% |
| !! | TTGCTTATAATTAAAAATGG+AGG | + | chr4_3:1753533-1753552 | Msa0623950:intron | 20.0% |
| !! | TGCTTATAATTAAAAATGGA+GGG | + | chr4_3:1753534-1753553 | Msa0623950:intron | 20.0% |
| !! | AAGTTTGTCACAATATAAAA+GGG | - | chr4_3:1753736-1753755 | None:intergenic | 20.0% |
| !! | AAAGTTTGTCACAATATAAA+AGG | - | chr4_3:1753737-1753756 | None:intergenic | 20.0% |
| !! | CTATAAGAATGTTATATTGT+TGG | - | chr4_3:1753827-1753846 | None:intergenic | 20.0% |
| !! | CAACAATATAACATTCTTAT+AGG | + | chr4_3:1753825-1753844 | Msa0623950:intron | 20.0% |
| !!! | TATGAGTTTTTATTGATTAG+TGG | + | chr4_3:1753945-1753964 | Msa0623950:intron | 20.0% |
| !! | ATTGATTATCATCCTATATA+AGG | + | chr4_3:1754091-1754110 | Msa0623950:intron | 20.0% |
| !! | ATGTTTGTGTACAATATATT+GGG | - | chr4_3:1754125-1754144 | None:intergenic | 20.0% |
| !! | TATGTTTGTGTACAATATAT+TGG | - | chr4_3:1754126-1754145 | None:intergenic | 20.0% |
| !!! | AATATTTTGTCGAGAAAAAA+AGG | - | chr4_3:1754556-1754575 | None:intergenic | 20.0% |
| !! | ATGTTATTAAAAGGGTAATA+AGG | + | chr4_3:1754705-1754724 | Msa0623950:intron | 20.0% |
| !! | AAAATATAAAAAGATACGAG+GGG | - | chr4_3:1755160-1755179 | None:intergenic | 20.0% |
| !! | GAAAATATAAAAAGATACGA+GGG | - | chr4_3:1755161-1755180 | None:intergenic | 20.0% |
| !! | AGAAAATATAAAAAGATACG+AGG | - | chr4_3:1755162-1755181 | None:intergenic | 20.0% |
| !!! | TCATTTTGTTTGTATTTTTC+GGG | + | chr4_3:1755189-1755208 | Msa0623950:intron | 20.0% |
| !!! | GGGATTTTTAGTTAAAATTA+TGG | + | chr4_3:1755679-1755698 | Msa0623950:intron | 20.0% |
| !! | GGTACTTCTAGTTAAAATTA+TGG | + | chr4_3:1746066-1746085 | Msa0623950:intron | 25.0% |
| ! | ACAATGCATAAAAATATGCA+AGG | - | chr4_3:1746277-1746296 | None:intergenic | 25.0% |
| !!! | TTTATTTTATAGTTGGGTGA+AGG | + | chr4_3:1746533-1746552 | Msa0623950:intron | 25.0% |
| ! | CTTATCGATAAATGTATCTT+TGG | + | chr4_3:1746713-1746732 | Msa0623950:intron | 25.0% |
| ! | TTTAAATTCAGTTAAGAAGG+TGG | + | chr4_3:1746891-1746910 | Msa0623950:intron | 25.0% |
| ! | CTATAAATACTGAACTCTTA+GGG | + | chr4_3:1747055-1747074 | Msa0623950:intron | 25.0% |
| ! | ATGATTACTTAATCCTCTTT+AGG | + | chr4_3:1747238-1747257 | Msa0623950:intron | 25.0% |
| ! | AGACCTAATGATCAATTTAT+AGG | - | chr4_3:1747376-1747395 | None:intergenic | 25.0% |
| !!! | ATGAATGCTTTTGAGTAATA+CGG | - | chr4_3:1747540-1747559 | None:intergenic | 25.0% |
| ! | ACAACTGCAAATATTAGTTA+TGG | - | chr4_3:1747982-1748001 | None:intergenic | 25.0% |
| !! | TTCCTTTGAAAAATCTTGAT+TGG | + | chr4_3:1748026-1748045 | Msa0623950:intron | 25.0% |
| !!! | TTCCAATCAAGATTTTTCAA+AGG | - | chr4_3:1748031-1748050 | None:intergenic | 25.0% |
| ! | TGAATGTATTAACATATCCA+AGG | - | chr4_3:1748061-1748080 | None:intergenic | 25.0% |
| ! | CTAAGAAGAATAATGAAACA+TGG | - | chr4_3:1748594-1748613 | None:intergenic | 25.0% |
| ! | AAAGTATAATGAATATGGCT+AGG | - | chr4_3:1748745-1748764 | None:intergenic | 25.0% |
| ! | ATTCAACTACTACTCTTAAA+AGG | + | chr4_3:1748867-1748886 | Msa0623950:intron | 25.0% |
| !!! | TTTTTTTTTTACTCTCCAGA+AGG | + | chr4_3:1748946-1748965 | Msa0623950:intron | 25.0% |
| ! | AACATAAATTGCGCATATTA+AGG | - | chr4_3:1749128-1749147 | None:intergenic | 25.0% |
| ! | AACGCCACAATTTATTAATT+GGG | - | chr4_3:1749564-1749583 | None:intergenic | 25.0% |
| !! | AAATACAAAGTGATGGAAAA+TGG | - | chr4_3:1749781-1749800 | None:intergenic | 25.0% |
| ! | TACAAGTAAATACAAAGTGA+TGG | - | chr4_3:1749788-1749807 | None:intergenic | 25.0% |
| !!! | ACATTTAAATTCAGGTTGTT+TGG | + | chr4_3:1749967-1749986 | Msa0623950:intron | 25.0% |
| !!! | TCATTTAAATTCAGGTTGTT+TGG | + | chr4_3:1750029-1750048 | Msa0623950:intron | 25.0% |
| ! | CATTTAAGAATACAGTTGTT+TGG | + | chr4_3:1750062-1750081 | Msa0623950:intron | 25.0% |
| ! | GGTTGGAAAATAAGATAATA+TGG | + | chr4_3:1750127-1750146 | Msa0623950:intron | 25.0% |
| ! | GGTAAAAATTAGGGTTAATT+AGG | - | chr4_3:1750317-1750336 | None:intergenic | 25.0% |
| ! | GAAAAAGCTAGGTAAAAATT+AGG | - | chr4_3:1750327-1750346 | None:intergenic | 25.0% |
| ! | CGAATTTATTGCATTGAAAT+GGG | - | chr4_3:1750353-1750372 | None:intergenic | 25.0% |
| !! | GTAAAAGTGCATTTAATGAA+TGG | - | chr4_3:1750505-1750524 | None:intergenic | 25.0% |
| ! | CAAACAATTGCATTTAAATG+AGG | - | chr4_3:1750555-1750574 | None:intergenic | 25.0% |
| ! | AAGATTGATCTTAAAGAAGA+AGG | - | chr4_3:1750579-1750598 | None:intergenic | 25.0% |
| ! | ATACATCTCTAAATCATCAT+TGG | - | chr4_3:1751112-1751131 | None:intergenic | 25.0% |
| ! | TCTTCTAACACTATATCAAA+TGG | - | chr4_3:1751373-1751392 | None:intergenic | 25.0% |
| ! | AAAGTTATAAGACATCAAAC+AGG | + | chr4_3:1751530-1751549 | Msa0623950:intron | 25.0% |
| ! | AGCTACAAGTTAACAATTAT+CGG | + | chr4_3:1751568-1751587 | Msa0623950:intron | 25.0% |
| ! | TCACCTACATATAAATTTAG+AGG | + | chr4_3:1751619-1751638 | Msa0623950:intron | 25.0% |
| ! | GATCCTCTAAATTTATATGT+AGG | - | chr4_3:1751625-1751644 | None:intergenic | 25.0% |
| !!! | CTAATGATAGAAAAGTATCT+TGG | - | chr4_3:1751775-1751794 | None:intergenic | 25.0% |
| ! | ACATATATTCAATCATAGTC+AGG | - | chr4_3:1751843-1751862 | None:intergenic | 25.0% |
| ! | GTAATACATCATATTCCTTA+TGG | + | chr4_3:1752139-1752158 | Msa0623950:intron | 25.0% |
| !! | AGGTTTGTATGAGATTTTAT+AGG | + | chr4_3:1752320-1752339 | Msa0623950:intron | 25.0% |
| !!! | AAGTTGGTGATATTAAAGAT+AGG | + | chr4_3:1752412-1752431 | Msa0623950:intron | 25.0% |
| ! | ATAGAATTCACTTGGATATT+TGG | + | chr4_3:1752586-1752605 | Msa0623950:intron | 25.0% |
| ! | TTCAAATTCATACAAATGCT+CGG | - | chr4_3:1752627-1752646 | None:intergenic | 25.0% |
| ! | ATGGTATCTCATCTTATATT+TGG | - | chr4_3:1752650-1752669 | None:intergenic | 25.0% |
| ! | ATTGAATGTATTATCCATGT+GGG | - | chr4_3:1752759-1752778 | None:intergenic | 25.0% |
| ! | AATTGAATGTATTATCCATG+TGG | - | chr4_3:1752760-1752779 | None:intergenic | 25.0% |
| !!! | AGTTCTTTTAATTTCTCAAC+TGG | + | chr4_3:1752993-1753012 | Msa0623950:intron | 25.0% |
| !!! | ATTGGACATGTATTTTGAAA+CGG | - | chr4_3:1753162-1753181 | None:intergenic | 25.0% |
| ! | ATAGTGCACATTACAAAAAT+TGG | - | chr4_3:1753180-1753199 | None:intergenic | 25.0% |
| !! | GAGGGAGTATAATTAAATAA+TGG | + | chr4_3:1753406-1753425 | Msa0623950:intron | 25.0% |
| !!! | GAGGAAGTACTAATTATTTA+AGG | - | chr4_3:1753473-1753492 | None:intergenic | 25.0% |
| ! | ATATTTGGAAGTGATAAAGT+CGG | + | chr4_3:1753865-1753884 | Msa0623950:intron | 25.0% |
| ! | AGTGGTCAAATAAAGTAAAA+AGG | + | chr4_3:1753963-1753982 | Msa0623950:intron | 25.0% |
| ! | TATCATCCTATATAAGGTTA+TGG | + | chr4_3:1754097-1754116 | Msa0623950:intron | 25.0% |
| ! | TGTTTGTGTACAATATATTG+GGG | - | chr4_3:1754124-1754143 | None:intergenic | 25.0% |
| ! | TAAAAGATGAGAAAAGTTAG+CGG | - | chr4_3:1754222-1754241 | None:intergenic | 25.0% |
| !! | CATCTTTTACATATCATTAC+CGG | + | chr4_3:1754233-1754252 | Msa0623950:intron | 25.0% |
| ! | GTATATAAAGAGAGAGAAAA+AGG | - | chr4_3:1754809-1754828 | None:intergenic | 25.0% |
| !!! | TTCCTTCCATGTTTTTTTAA+TGG | + | chr4_3:1754960-1754979 | Msa0623950:intron | 25.0% |
| ! | TGTAGTAAAAAAAAGGATCA+AGG | - | chr4_3:1754986-1755005 | None:intergenic | 25.0% |
| !! | TAAGATCACTACACAAATTT+TGG | - | chr4_3:1755087-1755106 | None:intergenic | 25.0% |
| ! | AATGAATTGAGAGTCTAATT+TGG | + | chr4_3:1755221-1755240 | Msa0623950:intron | 25.0% |
| ! | TTCCTTTGACATATAATTTC+CGG | - | chr4_3:1755268-1755287 | None:intergenic | 25.0% |
| ! | GTAAAAATATGTTAGCTAGA+TGG | - | chr4_3:1755361-1755380 | None:intergenic | 25.0% |
| !!! | GATAAATAGGTTTTATGTAG+TGG | + | chr4_3:1755425-1755444 | Msa0623950:intron | 25.0% |
| ! | ATCAAATACATGAAAGAACT+TGG | + | chr4_3:1755456-1755475 | Msa0623950:intron | 25.0% |
| !! | AAAAGCAATGTCTTATCTTT+TGG | + | chr4_3:1755734-1755753 | Msa0623950:intron | 25.0% |
| AACAAAAACAGAGTTACGTA+TGG | + | chr4_3:1745892-1745911 | Msa0623950:CDS | 30.0% | |
| ACAAAAACAGAGTTACGTAT+GGG | + | chr4_3:1745893-1745912 | Msa0623950:CDS | 30.0% | |
| TTATGCAATTCCACATGAAA+TGG | - | chr4_3:1745999-1746018 | None:intergenic | 30.0% | |
| !! | GTTGATTTGGATCTAATGAT+AGG | + | chr4_3:1746036-1746055 | Msa0623950:intron | 30.0% |
| ! | AAACGCAATGTCTTATCTTT+TGG | + | chr4_3:1746120-1746139 | Msa0623950:intron | 30.0% |
| GACAACAAATAGTTACAATG+CGG | - | chr4_3:1746155-1746174 | None:intergenic | 30.0% | |
| ! | AAACGCAATGTCTTATCTTT+TGG | + | chr4_3:1746120-1746139 | Msa0623950:intron | 30.0% |
| ATTACCATCATTACTCACTA+GGG | + | chr4_3:1746214-1746233 | Msa0623950:intron | 30.0% | |
| !!! | CACTAGGGATTTTTTTTTTG+TGG | + | chr4_3:1746229-1746248 | Msa0623950:intron | 30.0% |
| !!! | TAGGGATTTTTTTTTTGTGG+TGG | + | chr4_3:1746232-1746251 | Msa0623950:intron | 30.0% |
| ATAAAAATATGCAAGGTTCG+GGG | - | chr4_3:1746270-1746289 | None:intergenic | 30.0% | |
| CATAAAAATATGCAAGGTTC+GGG | - | chr4_3:1746271-1746290 | None:intergenic | 30.0% | |
| GCATAAAAATATGCAAGGTT+CGG | - | chr4_3:1746272-1746291 | None:intergenic | 30.0% | |
| ! | TATTTGTGACTTTTGTTCAG+CGG | - | chr4_3:1746673-1746692 | None:intergenic | 30.0% |
| TAGATTTGCATATTCCAGTA+AGG | - | chr4_3:1746812-1746831 | None:intergenic | 30.0% | |
| !!! | ACACTAAGTTTTAGGGAAAT+TGG | - | chr4_3:1747026-1747045 | None:intergenic | 30.0% |
| TTCCCTAAAACTTAGTGTAA+TGG | + | chr4_3:1747028-1747047 | Msa0623950:intron | 30.0% | |
| ! | GTCCATTACACTAAGTTTTA+GGG | - | chr4_3:1747033-1747052 | None:intergenic | 30.0% |
| CCTAAGAGTTCAGTATTTAT+AGG | - | chr4_3:1747057-1747076 | None:intergenic | 30.0% | |
| CCTATAAATACTGAACTCTT+AGG | + | chr4_3:1747054-1747073 | Msa0623950:intron | 30.0% | |
| !! | AAAAACACATTTTGATGAGC+AGG | + | chr4_3:1747084-1747103 | Msa0623950:intron | 30.0% |
| ATTCATGATCTAACCTAAAG+AGG | - | chr4_3:1747254-1747273 | None:intergenic | 30.0% | |
| TTAAACGTTTAACTAGGTCA+AGG | - | chr4_3:1747426-1747445 | None:intergenic | 30.0% | |
| GAATGGTTAAACGTTTAACT+AGG | - | chr4_3:1747432-1747451 | None:intergenic | 30.0% | |
| CACAATAAGTCATGATTGAA+TGG | - | chr4_3:1747449-1747468 | None:intergenic | 30.0% | |
| AATCATGACTTATTGTGAGA+CGG | + | chr4_3:1747452-1747471 | Msa0623950:intron | 30.0% | |
| TATATTGCCTGTGATATCAA+AGG | + | chr4_3:1747486-1747505 | Msa0623950:intron | 30.0% | |
| ! | ACAAGCATGTGATATTTTGT+TGG | + | chr4_3:1747512-1747531 | Msa0623950:intron | 30.0% |
| ! | TATCATTGATGACAAGAACA+AGG | - | chr4_3:1747587-1747606 | None:intergenic | 30.0% |
| CTACGTAAAATTACATAGCT+TGG | - | chr4_3:1747777-1747796 | None:intergenic | 30.0% | |
| !! | AGGAAGCTCTTTGAAATAAA+TGG | - | chr4_3:1748011-1748030 | None:intergenic | 30.0% |
| GGATATGTTAATACATTCAG+AGG | + | chr4_3:1748062-1748081 | Msa0623950:intron | 30.0% | |
| AGAATGAAAGAAAGATGAGT+CGG | - | chr4_3:1748186-1748205 | None:intergenic | 30.0% | |
| !! | AGATACAAAGTTGATAGTTC+TGG | + | chr4_3:1748255-1748274 | Msa0623950:intron | 30.0% |
| !! | GATACAAAGTTGATAGTTCT+GGG | + | chr4_3:1748256-1748275 | Msa0623950:intron | 30.0% |
| ACAAAAATTCGTGATGCAAT+TGG | + | chr4_3:1748324-1748343 | Msa0623950:intron | 30.0% | |
| AGTTTCTTAACAAGTGTCTT+AGG | - | chr4_3:1748470-1748489 | None:intergenic | 30.0% | |
| ATGGAAAGATGATATGTTTG+AGG | - | chr4_3:1748629-1748648 | None:intergenic | 30.0% | |
| ATGCATTGAAGAAACAAGAA+TGG | - | chr4_3:1748648-1748667 | None:intergenic | 30.0% | |
| ACGTAGTTGTATTGAACATA+AGG | + | chr4_3:1748919-1748938 | Msa0623950:intron | 30.0% | |
| CGTAGTTGTATTGAACATAA+GGG | + | chr4_3:1748920-1748939 | Msa0623950:intron | 30.0% | |
| !! | TTTTTGGTAGATAGAAGAGA+TGG | - | chr4_3:1749239-1749258 | None:intergenic | 30.0% |
| TAGATAAACAATAAGGCTAG+TGG | - | chr4_3:1749339-1749358 | None:intergenic | 30.0% | |
| !! | TGCTACGTTTTGATAAAGAA+GGG | - | chr4_3:1749411-1749430 | None:intergenic | 30.0% |
| CAACGCCACAATTTATTAAT+TGG | - | chr4_3:1749565-1749584 | None:intergenic | 30.0% | |
| TATGTGGGTTTATCAATTTC+AGG | + | chr4_3:1749696-1749715 | Msa0623950:intron | 30.0% | |
| !! | GGGTTAGAATTTGTTGAAAA+CGG | + | chr4_3:1749741-1749760 | Msa0623950:intron | 30.0% |
| !! | TTAGAATTTGTTGAAAACGG+TGG | + | chr4_3:1749744-1749763 | Msa0623950:intron | 30.0% |
| CTTACTTACTAAAGTTTGTC+AGG | + | chr4_3:1749842-1749861 | Msa0623950:intron | 30.0% | |
| GTATTTATGGCGTGTATTAA+GGG | - | chr4_3:1749949-1749968 | None:intergenic | 30.0% | |
| TGTATTTATGGCGTGTATTA+AGG | - | chr4_3:1749950-1749969 | None:intergenic | 30.0% | |
| GAATTTATGGCGTGTATTAA+GGG | - | chr4_3:1750011-1750030 | None:intergenic | 30.0% | |
| TGAATTTATGGCGTGTATTA+AGG | - | chr4_3:1750012-1750031 | None:intergenic | 30.0% | |
| TTTCAATAATAGAACACGGT+TGG | + | chr4_3:1750110-1750129 | Msa0623950:intron | 30.0% | |
| TTTATTGCATTGAAATGGGA+GGG | - | chr4_3:1750349-1750368 | None:intergenic | 30.0% | |
| ATTTATTGCATTGAAATGGG+AGG | - | chr4_3:1750350-1750369 | None:intergenic | 30.0% | |
| GCGAATTTATTGCATTGAAA+TGG | - | chr4_3:1750354-1750373 | None:intergenic | 30.0% | |
| ACATTTATTGCATGACAAAG+GGG | - | chr4_3:1750393-1750412 | None:intergenic | 30.0% | |
| GACATTTATTGCATGACAAA+GGG | - | chr4_3:1750394-1750413 | None:intergenic | 30.0% | |
| TGACATTTATTGCATGACAA+AGG | - | chr4_3:1750395-1750414 | None:intergenic | 30.0% | |
| TGAGAATTCGAAATGCTTTA+AGG | - | chr4_3:1750459-1750478 | None:intergenic | 30.0% | |
| TCTCCTCATTTAAATGCAAT+TGG | + | chr4_3:1750549-1750568 | Msa0623950:intron | 30.0% | |
| CAACCAATTGCATTTAAATG+AGG | - | chr4_3:1750700-1750719 | None:intergenic | 30.0% | |
| ! | GGATTGACTCAAAGAAAATA+TGG | - | chr4_3:1750945-1750964 | None:intergenic | 30.0% |
| CAAATTATTCCATCTGAATG+TGG | + | chr4_3:1751193-1751212 | Msa0623950:intron | 30.0% | |
| ATACGTCTCTAAATCATCAT+TGG | - | chr4_3:1751280-1751299 | None:intergenic | 30.0% | |
| ATTAATGTATCCAAACTGAG+TGG | - | chr4_3:1751673-1751692 | None:intergenic | 30.0% | |
| TTTCGGATTGAAATTCCATA+TGG | - | chr4_3:1751748-1751767 | None:intergenic | 30.0% | |
| ATGGAATTTCAATCCGAAAA+TGG | + | chr4_3:1751749-1751768 | Msa0623950:intron | 30.0% | |
| !!! | AAAAGTATCTTGGCCATTTT+CGG | - | chr4_3:1751765-1751784 | None:intergenic | 30.0% |
| ATGTAAGTTAGTTGGTCATA+AGG | + | chr4_3:1751808-1751827 | Msa0623950:intron | 30.0% | |
| AATTTATGCAAACACGTTCT+TGG | - | chr4_3:1752053-1752072 | None:intergenic | 30.0% | |
| TTAGAGAGGTTTATAGTAGT+AGG | + | chr4_3:1752271-1752290 | Msa0623950:intron | 30.0% | |
| TAGAGAGGTTTATAGTAGTA+GGG | + | chr4_3:1752272-1752291 | Msa0623950:intron | 30.0% | |
| GTTTATAGTAGTAGGGTTTA+GGG | + | chr4_3:1752279-1752298 | Msa0623950:intron | 30.0% | |
| TTTATAGTAGTAGGGTTTAG+GGG | + | chr4_3:1752280-1752299 | Msa0623950:intron | 30.0% | |
| TTAGGGGATAAAATCAAAGT+AGG | + | chr4_3:1752296-1752315 | Msa0623950:intron | 30.0% | |
| CAAATGGATCATTTATTGTG+CGG | + | chr4_3:1752369-1752388 | Msa0623950:intron | 30.0% | |
| !! | GACATCTTGTAATGTTTTTG+TGG | + | chr4_3:1752559-1752578 | Msa0623950:intron | 30.0% |
| GTGGTAAAATAGAATTCACT+TGG | + | chr4_3:1752578-1752597 | Msa0623950:intron | 30.0% | |
| TCAAATTCATACAAATGCTC+GGG | - | chr4_3:1752626-1752645 | None:intergenic | 30.0% | |
| !! | TGCATTATTGGCTTATCTTA+TGG | - | chr4_3:1752669-1752688 | None:intergenic | 30.0% |
| ATAAGCCAATAATGCAACAA+AGG | + | chr4_3:1752673-1752692 | Msa0623950:intron | 30.0% | |
| TAAGCCAATAATGCAACAAA+GGG | + | chr4_3:1752674-1752693 | Msa0623950:intron | 30.0% | |
| GATAAGATCATCTTCATTTC+TGG | - | chr4_3:1752735-1752754 | None:intergenic | 30.0% | |
| !! | CAATGATTCTGGTTTAACAT+TGG | - | chr4_3:1752894-1752913 | None:intergenic | 30.0% |
| AGTAAACAGCTGAAAAATGT+TGG | - | chr4_3:1753033-1753052 | None:intergenic | 30.0% | |
| GTGCATTGAAATTGTCATAA+GGG | - | chr4_3:1753117-1753136 | None:intergenic | 30.0% | |
| ATGAAATATATTCGAGCAGA+AGG | - | chr4_3:1753139-1753158 | None:intergenic | 30.0% | |
| !!! | GTTGACTTGAACATGTATTT+TGG | + | chr4_3:1753379-1753398 | Msa0623950:intron | 30.0% |
| !! | CTTGAACATGTATTTTGGAA+CGG | + | chr4_3:1753384-1753403 | Msa0623950:intron | 30.0% |
| ATGTCTGGATGAATCATTAA+CGG | + | chr4_3:1754051-1754070 | Msa0623950:intron | 30.0% | |
| ! | ATTTGAGGTATAAAGAGTGA+CGG | + | chr4_3:1754173-1754192 | Msa0623950:intron | 30.0% |
| ! | TTCCTTTTCATTATGGATTC+AGG | + | chr4_3:1754258-1754277 | Msa0623950:intron | 30.0% |
| TACCTGAATCCATAATGAAA+AGG | - | chr4_3:1754263-1754282 | None:intergenic | 30.0% | |
| ! | AACGTTCACGTTTGATTTAT+TGG | + | chr4_3:1754457-1754476 | Msa0623950:intron | 30.0% |
| ! | ACGTTCACGTTTGATTTATT+GGG | + | chr4_3:1754458-1754477 | Msa0623950:intron | 30.0% |
| AAAAAGGCCAACAAATTGAT+GGG | - | chr4_3:1754540-1754559 | None:intergenic | 30.0% | |
| AAAAAAGGCCAACAAATTGA+TGG | - | chr4_3:1754541-1754560 | None:intergenic | 30.0% | |
| TCAAGGCCATTAAAAAAACA+TGG | - | chr4_3:1754969-1754988 | None:intergenic | 30.0% | |
| TACTACGTACTATATTAGCA+TGG | - | chr4_3:1755016-1755035 | None:intergenic | 30.0% | |
| !!! | GTACGTAGTACTTTTTCAAA+TGG | + | chr4_3:1755026-1755045 | Msa0623950:intron | 30.0% |
| AATATGTTAGCTAGATGGAT+AGG | - | chr4_3:1755356-1755375 | None:intergenic | 30.0% | |
| !! | TGTTCTTCTAAAACTTCCAA+AGG | - | chr4_3:1755486-1755505 | None:intergenic | 30.0% |
| TCATTTGATGAGAACATTGA+AGG | + | chr4_3:1755575-1755594 | Msa0623950:CDS | 30.0% | |
| ! | TAGGGAAAGATATGTTGATT+TGG | + | chr4_3:1755636-1755655 | Msa0623950:intron | 30.0% |
| !!! | ATTATTTTAGAGTTGGGTGA+AGG | + | chr4_3:1756058-1756077 | Msa0623950:intron | 30.0% |
| !! | GAATGAACTTGAAAAGCGTT+TGG | + | chr4_3:1745857-1745876 | Msa0623950:CDS | 35.0% |
| !! | TCATTTGATGAGAGCATTGA+AGG | + | chr4_3:1745960-1745979 | Msa0623950:CDS | 35.0% |
| GTGGAATTGCATAAGTGTTA+TGG | + | chr4_3:1746005-1746024 | Msa0623950:intron | 35.0% | |
| ! | GATCTAATGATAGGAGTACA+AGG | + | chr4_3:1746045-1746064 | Msa0623950:intron | 35.0% |
| ACAAATAGTTACAATGCGGA+TGG | - | chr4_3:1746151-1746170 | None:intergenic | 35.0% | |
| ! | AATGATGGTAATGTCAAGGA+TGG | - | chr4_3:1746206-1746225 | None:intergenic | 35.0% |
| ! | GAGTAATGATGGTAATGTCA+AGG | - | chr4_3:1746210-1746229 | None:intergenic | 35.0% |
| CATTACCATCATTACTCACT+AGG | + | chr4_3:1746213-1746232 | Msa0623950:intron | 35.0% | |
| AAATCCCTAGTGAGTAATGA+TGG | - | chr4_3:1746221-1746240 | None:intergenic | 35.0% | |
| !!! | GATTTTTTTTTTGTGGTGGC+CGG | + | chr4_3:1746236-1746255 | Msa0623950:intron | 35.0% |
| !!! | ATTTTTTTTTTGTGGTGGCC+GGG | + | chr4_3:1746237-1746256 | Msa0623950:intron | 35.0% |
| ACGAATATCTTCAACCTTAC+TGG | + | chr4_3:1746795-1746814 | Msa0623950:intron | 35.0% | |
| ! | CGTCCATTACACTAAGTTTT+AGG | - | chr4_3:1747034-1747053 | None:intergenic | 35.0% |
| !! | GGAAAAACCACATTTTTCGA+AGG | + | chr4_3:1747111-1747130 | Msa0623950:intron | 35.0% |
| !! | AACCACATTTTTCGAAGGAT+TGG | + | chr4_3:1747116-1747135 | Msa0623950:intron | 35.0% |
| ! | CATTGATTGATGAGATACCT+TGG | - | chr4_3:1747164-1747183 | None:intergenic | 35.0% |
| TTGTAGTCCTTTGATATCAC+AGG | - | chr4_3:1747496-1747515 | None:intergenic | 35.0% | |
| !! | ACTCAAAAGCATTCATGTCA+TGG | + | chr4_3:1747544-1747563 | Msa0623950:intron | 35.0% |
| ATTTAAACCCCAAGGTTAAG+TGG | - | chr4_3:1747880-1747899 | None:intergenic | 35.0% | |
| TTACTCACAAAAATGTGAGC+TGG | + | chr4_3:1747913-1747932 | Msa0623950:intron | 35.0% | |
| TTGATTGGAATTGAATGCCT+TGG | + | chr4_3:1748041-1748060 | Msa0623950:intron | 35.0% | |
| ! | AAAGTACTAATGAAGCAGCA+AGG | + | chr4_3:1748085-1748104 | Msa0623950:intron | 35.0% |
| ATTCAAGAATCACTCTGCAT+TGG | - | chr4_3:1748358-1748377 | None:intergenic | 35.0% | |
| ATGCTAGACATTAGACATTG+TGG | - | chr4_3:1748383-1748402 | None:intergenic | 35.0% | |
| TTCTTAACAAGTGTCTTAGG+CGG | - | chr4_3:1748467-1748486 | None:intergenic | 35.0% | |
| AACCAAAACATTGTAGAACG+CGG | + | chr4_3:1748836-1748855 | Msa0623950:intron | 35.0% | |
| !! | CTGCTACGTTTTGATAAAGA+AGG | - | chr4_3:1749412-1749431 | None:intergenic | 35.0% |
| TGGCTGAACAATTGAAAGAA+GGG | - | chr4_3:1749513-1749532 | None:intergenic | 35.0% | |
| ATGGCTGAACAATTGAAAGA+AGG | - | chr4_3:1749514-1749533 | None:intergenic | 35.0% | |
| GGGTCCCAATTAATAAATTG+TGG | + | chr4_3:1749557-1749576 | Msa0623950:intron | 35.0% | |
| TTTCAAGCAAAAGGAGTTCA+TGG | + | chr4_3:1749594-1749613 | Msa0623950:intron | 35.0% | |
| ! | TATCAATTTCAGGTACAAGC+AGG | + | chr4_3:1749706-1749725 | Msa0623950:intron | 35.0% |
| ! | ATCAATTTCAGGTACAAGCA+GGG | + | chr4_3:1749707-1749726 | Msa0623950:intron | 35.0% |
| GGAATAAATGCGCTAGAAAT+GGG | - | chr4_3:1749910-1749929 | None:intergenic | 35.0% | |
| TGGAATAAATGCGCTAGAAA+TGG | - | chr4_3:1749911-1749930 | None:intergenic | 35.0% | |
| !! | CTTTGTTTCTAAAGCTTGTC+TGG | + | chr4_3:1750281-1750300 | Msa0623950:intron | 35.0% |
| GTGCATTTAATGAATGGCAA+AGG | - | chr4_3:1750499-1750518 | None:intergenic | 35.0% | |
| AAATTCATTGCGTGACAAAG+GGG | - | chr4_3:1750650-1750669 | None:intergenic | 35.0% | |
| GAAATTCATTGCGTGACAAA+GGG | - | chr4_3:1750651-1750670 | None:intergenic | 35.0% | |
| TGAAATTCATTGCGTGACAA+AGG | - | chr4_3:1750652-1750671 | None:intergenic | 35.0% | |
| GACATTCATTGCATGACAAA+GGG | - | chr4_3:1750795-1750814 | None:intergenic | 35.0% | |
| TGACATTCATTGCATGACAA+AGG | - | chr4_3:1750796-1750815 | None:intergenic | 35.0% | |
| TGAAGATGATTTCTGCTAAG+GGG | - | chr4_3:1750859-1750878 | None:intergenic | 35.0% | |
| GTGAAGATGATTTCTGCTAA+GGG | - | chr4_3:1750860-1750879 | None:intergenic | 35.0% | |
| TATTACACGAGATTCAGATG+TGG | + | chr4_3:1751025-1751044 | Msa0623950:intron | 35.0% | |
| TAGAACTAACCACATTCAGA+TGG | - | chr4_3:1751205-1751224 | None:intergenic | 35.0% | |
| GATTTCAACATGCATCCATA+TGG | + | chr4_3:1751730-1751749 | Msa0623950:intron | 35.0% | |
| CTAAATGGGAATGAAGATAG+TGG | - | chr4_3:1751957-1751976 | None:intergenic | 35.0% | |
| AACACGTTCTTGGATTTACA+TGG | - | chr4_3:1752043-1752062 | None:intergenic | 35.0% | |
| !!! | TATTCGTCGCTTTTCTTCAT+TGG | + | chr4_3:1752201-1752220 | Msa0623950:intron | 35.0% |
| GGTTTATAGTAGTAGGGTTT+AGG | + | chr4_3:1752278-1752297 | Msa0623950:intron | 35.0% | |
| GGGATAAAATCAAAGTAGGT+AGG | + | chr4_3:1752300-1752319 | Msa0623950:intron | 35.0% | |
| !!! | GACATCGGGTTTTGAAATTT+TGG | + | chr4_3:1752466-1752485 | Msa0623950:intron | 35.0% |
| ! | AGAAGCATATGAAAACGTGA+AGG | - | chr4_3:1752807-1752826 | None:intergenic | 35.0% |
| !!! | TTTGGTTTTAACCCACATGA+CGG | - | chr4_3:1752951-1752970 | None:intergenic | 35.0% |
| TTATGTGTCAAACCTCATGT+CGG | + | chr4_3:1753058-1753077 | Msa0623950:intron | 35.0% | |
| GGTGCATTGAAATTGTCATA+AGG | - | chr4_3:1753118-1753137 | None:intergenic | 35.0% | |
| TAACGGTCAAAATTGTGCAT+TGG | + | chr4_3:1753343-1753362 | Msa0623950:intron | 35.0% | |
| !!! | AACATGTATTTTGGAACGGA+GGG | + | chr4_3:1753388-1753407 | Msa0623950:intron | 35.0% |
| TGCAATAACTAGCGTTTAGA+TGG | + | chr4_3:1753593-1753612 | Msa0623950:intron | 35.0% | |
| GCAATAACTAGCGTTTAGAT+GGG | + | chr4_3:1753594-1753613 | Msa0623950:intron | 35.0% | |
| ACCTCAAATTCTCTTCAGAT+GGG | - | chr4_3:1754162-1754181 | None:intergenic | 35.0% | |
| TACCTCAAATTCTCTTCAGA+TGG | - | chr4_3:1754163-1754182 | None:intergenic | 35.0% | |
| AAAGTTAGCGGCAGTTAATT+TGG | - | chr4_3:1754210-1754229 | None:intergenic | 35.0% | |
| TCCATAATGAAAAGGAACTC+CGG | - | chr4_3:1754255-1754274 | None:intergenic | 35.0% | |
| !! | TGATACAACTTGCTGGAATT+AGG | - | chr4_3:1754432-1754451 | None:intergenic | 35.0% |
| TACACATGCTAATGAACAAG+AGG | + | chr4_3:1754826-1754845 | Msa0623950:intron | 35.0% | |
| GGCCATTAAAAAAACATGGA+AGG | - | chr4_3:1754965-1754984 | None:intergenic | 35.0% | |
| !! | TTGAGAGTCTAATTTGGTGT+TGG | + | chr4_3:1755227-1755246 | Msa0623950:intron | 35.0% |
| TGCCGGAAATTATATGTCAA+AGG | + | chr4_3:1755263-1755282 | Msa0623950:intron | 35.0% | |
| ACAAAAATAGAGTCACGTAG+AGG | + | chr4_3:1755508-1755527 | Msa0623950:intron | 35.0% | |
| AATGTTCTCATCAAATGACG+AGG | - | chr4_3:1755573-1755592 | None:intergenic | 35.0% | |
| !! | GAGAACATTGAAGGTGTTAT+TGG | + | chr4_3:1755584-1755603 | Msa0623950:intron | 35.0% |
| !! | TATTGGTTCACCATTTCATG+TGG | + | chr4_3:1755601-1755620 | Msa0623950:intron | 35.0% |
| AGACATTACCATCATTACTC+AGG | + | chr4_3:1755757-1755776 | Msa0623950:intron | 35.0% | |
| ATTACCATCATTACTCAGGT+AGG | + | chr4_3:1755761-1755780 | Msa0623950:intron | 35.0% | |
| TTACCATCATTACTCAGGTA+GGG | + | chr4_3:1755762-1755781 | Msa0623950:intron | 35.0% | |
| !!! | CAGGTAGGGATTTCTTTTTT+TGG | + | chr4_3:1755776-1755795 | Msa0623950:intron | 35.0% |
| !! | TTTTTGGTCAAGTAGACTAG+TGG | + | chr4_3:1755792-1755811 | Msa0623950:intron | 35.0% |
| ! | TTTTGGTCAAGTAGACTAGT+GGG | + | chr4_3:1755793-1755812 | Msa0623950:intron | 35.0% |
| AATGCTCTCATCAAATGACG+AGG | - | chr4_3:1745958-1745977 | None:intergenic | 40.0% | |
| !! | TGTTGGTTCACCATTTCATG+TGG | + | chr4_3:1745986-1746005 | Msa0623950:intron | 40.0% |
| !!! | TTTTTTTTTTGTGGTGGCCG+GGG | + | chr4_3:1746238-1746257 | Msa0623950:intron | 40.0% |
| ACTTCAATGCTATCATGCGT+AGG | - | chr4_3:1746592-1746611 | None:intergenic | 40.0% | |
| CTCCAATCCTTCGAAAAATG+TGG | - | chr4_3:1747121-1747140 | None:intergenic | 40.0% | |
| GAGATACCTTGGTTTCTGAA+TGG | - | chr4_3:1747153-1747172 | None:intergenic | 40.0% | |
| ATGACTTATTGTGAGACGGA+GGG | + | chr4_3:1747456-1747475 | Msa0623950:intron | 40.0% | |
| AATCCCATCCACTTAACCTT+GGG | + | chr4_3:1747869-1747888 | Msa0623950:intron | 40.0% | |
| ! | ATCGGTTCATTTAAACCCCA+AGG | - | chr4_3:1747888-1747907 | None:intergenic | 40.0% |
| ! | TATTTTGCAACTCCAGTCAC+TGG | + | chr4_3:1747936-1747955 | Msa0623950:intron | 40.0% |
| ! | ATTTTGCAACTCCAGTCACT+GGG | + | chr4_3:1747937-1747956 | Msa0623950:intron | 40.0% |
| ACATTCCAGACATACTGTGA+TGG | + | chr4_3:1748110-1748129 | Msa0623950:intron | 40.0% | |
| ACATACTGTGATGGTAGCTT+AGG | + | chr4_3:1748119-1748138 | Msa0623950:intron | 40.0% | |
| CATACTGTGATGGTAGCTTA+GGG | + | chr4_3:1748120-1748139 | Msa0623950:intron | 40.0% | |
| ! | TACCGCGTTCTACAATGTTT+TGG | - | chr4_3:1748841-1748860 | None:intergenic | 40.0% |
| AGGCTAGTGGAACTTAAACA+TGG | - | chr4_3:1749326-1749345 | None:intergenic | 40.0% | |
| GAACAATTGAAAGAAGGGGT+TGG | - | chr4_3:1749508-1749527 | None:intergenic | 40.0% | |
| GGCTGAACAATTGAAAGAAG+GGG | - | chr4_3:1749512-1749531 | None:intergenic | 40.0% | |
| ACAAGCAGGGTTAGAATTTC+AGG | + | chr4_3:1749720-1749739 | Msa0623950:intron | 40.0% | |
| CAAGCAGGGTTAGAATTTCA+GGG | + | chr4_3:1749721-1749740 | Msa0623950:intron | 40.0% | |
| !! | GAATTTGTTGAAAACGGTGG+TGG | + | chr4_3:1749747-1749766 | Msa0623950:intron | 40.0% |
| TAAATGCGCTAGAAATGGGA+GGG | - | chr4_3:1749906-1749925 | None:intergenic | 40.0% | |
| ATAAATGCGCTAGAAATGGG+AGG | - | chr4_3:1749907-1749926 | None:intergenic | 40.0% | |
| TGAATGGCAAAGGAGTGAAA+AGG | - | chr4_3:1750489-1750508 | None:intergenic | 40.0% | |
| TTGCATGACAAAGGGTTAGA+AGG | - | chr4_3:1750787-1750806 | None:intergenic | 40.0% | |
| GAAGATGATTTCTGCTAAGG+GGG | - | chr4_3:1750858-1750877 | None:intergenic | 40.0% | |
| GGTGAAGATGATTTCTGCTA+AGG | - | chr4_3:1750861-1750880 | None:intergenic | 40.0% | |
| AAATCATCTTCACCCTCTCA+TGG | + | chr4_3:1750867-1750886 | Msa0623950:intron | 40.0% | |
| AATCATCTTCACCCTCTCAT+GGG | + | chr4_3:1750868-1750887 | Msa0623950:intron | 40.0% | |
| TGAACAAGTTCCACTCAGTT+TGG | + | chr4_3:1751660-1751679 | Msa0623950:intron | 40.0% | |
| TAACCTCTCTTAAGCCTTAG+AGG | + | chr4_3:1751906-1751925 | Msa0623950:intron | 40.0% | |
| !! | TAACCTCTAAGGCTTAAGAG+AGG | - | chr4_3:1751912-1751931 | None:intergenic | 40.0% |
| TTGAGACATGCTAACCTCTA+AGG | - | chr4_3:1751923-1751942 | None:intergenic | 40.0% | |
| ! | AATGGGAATGAAGATAGTGG+AGG | - | chr4_3:1751954-1751973 | None:intergenic | 40.0% |
| GTGATCAGTAAACGTTAGAG+AGG | + | chr4_3:1752257-1752276 | Msa0623950:intron | 40.0% | |
| !! | GGGAGTATCATACTACAAGT+TGG | + | chr4_3:1752396-1752415 | Msa0623950:intron | 40.0% |
| CTCTCCCTTTGTTGCATTAT+TGG | - | chr4_3:1752681-1752700 | None:intergenic | 40.0% | |
| ATAATGCAACAAAGGGAGAG+AGG | + | chr4_3:1752681-1752700 | Msa0623950:intron | 40.0% | |
| AGATGATCTTATCTCCCACA+TGG | + | chr4_3:1752742-1752761 | Msa0623950:intron | 40.0% | |
| GCCTACAACCAATAATGCTA+CGG | - | chr4_3:1752872-1752891 | None:intergenic | 40.0% | |
| TCATGTCGGTAGCATACATT+GGG | + | chr4_3:1753072-1753091 | Msa0623950:intron | 40.0% | |
| !!! | GAACATGTATTTTGGAACGG+AGG | + | chr4_3:1753387-1753406 | Msa0623950:intron | 40.0% |
| GAAAATGTTAACCGGTGTTC+CGG | + | chr4_3:1753428-1753447 | Msa0623950:intron | 40.0% | |
| AAAATGTTAACCGGTGTTCC+GGG | + | chr4_3:1753429-1753448 | Msa0623950:intron | 40.0% | |
| TGATAGGAACTCAATGTGAG+TGG | + | chr4_3:1754028-1754047 | Msa0623950:intron | 40.0% | |
| TGGGGACCATAACCTTATAT+AGG | - | chr4_3:1754106-1754125 | None:intergenic | 40.0% | |
| CTCAAATTCTCTTCAGATGG+GGG | - | chr4_3:1754160-1754179 | None:intergenic | 40.0% | |
| CCTCAAATTCTCTTCAGATG+GGG | - | chr4_3:1754161-1754180 | None:intergenic | 40.0% | |
| ! | ACCGGAGTTCCTTTTCATTA+TGG | + | chr4_3:1754251-1754270 | Msa0623950:intron | 40.0% |
| TTCTCTCTGATACAACTTGC+TGG | - | chr4_3:1754439-1754458 | None:intergenic | 40.0% | |
| GCATGTTCCCATCAATTTGT+TGG | + | chr4_3:1754530-1754549 | Msa0623950:intron | 40.0% | |
| AAAATCGCTCACCAATCTCA+CGG | + | chr4_3:1754914-1754933 | Msa0623950:intron | 40.0% | |
| ACCATTTCATGTGGAAGCAA+GGG | + | chr4_3:1755610-1755629 | Msa0623950:intron | 40.0% | |
| ! | ATCCAATCTCAGAAGTGCAA+GGG | + | chr4_3:1755659-1755678 | Msa0623950:intron | 40.0% |
| AATCCCTACCTGAGTAATGA+TGG | - | chr4_3:1755768-1755787 | None:intergenic | 40.0% | |
| TTTGGTCAAGTAGACTAGTG+GGG | + | chr4_3:1755794-1755813 | Msa0623950:intron | 40.0% | |
| AGGCAACAACTTGAGCATAA+AGG | + | chr4_3:1756078-1756097 | Msa0623950:CDS | 40.0% | |
| ACTTCAATGTTGTCATGCGT+AGG | - | chr4_3:1756117-1756136 | None:intergenic | 40.0% | |
| !! | GAGAGCATTGAAGGTGTTGT+TGG | + | chr4_3:1745969-1745988 | Msa0623950:CDS | 45.0% |
| !! | GGGAAATTGGTTCGTCATGT+AGG | - | chr4_3:1747013-1747032 | None:intergenic | 45.0% |
| !! | ACATTTTGATGAGCAGGCGA+AGG | + | chr4_3:1747090-1747109 | Msa0623950:intron | 45.0% |
| AGGTCAAGGCAACAAAGTCA+GGG | - | chr4_3:1747412-1747431 | None:intergenic | 45.0% | |
| TAGGTCAAGGCAACAAAGTC+AGG | - | chr4_3:1747413-1747432 | None:intergenic | 45.0% | |
| CATGACTTATTGTGAGACGG+AGG | + | chr4_3:1747455-1747474 | Msa0623950:intron | 45.0% | |
| TTCATATGGTTCATGCGCAG+TGG | + | chr4_3:1747630-1747649 | Msa0623950:intron | 45.0% | |
| CATGCATGCAGTAGCACTAA+TGG | + | chr4_3:1747665-1747684 | Msa0623950:intron | 45.0% | |
| AGCTTGGTACACGAAAACGA+CGG | - | chr4_3:1747761-1747780 | None:intergenic | 45.0% | |
| CAATCCCATCCACTTAACCT+TGG | + | chr4_3:1747868-1747887 | Msa0623950:intron | 45.0% | |
| ATCCCATCCACTTAACCTTG+GGG | + | chr4_3:1747870-1747889 | Msa0623950:intron | 45.0% | |
| AACCCCAAGGTTAAGTGGAT+GGG | - | chr4_3:1747875-1747894 | None:intergenic | 45.0% | |
| AAACCCCAAGGTTAAGTGGA+TGG | - | chr4_3:1747876-1747895 | None:intergenic | 45.0% | |
| AGCTACCATCACAGTATGTC+TGG | - | chr4_3:1748118-1748137 | None:intergenic | 45.0% | |
| ATGGTAGCTTAGGGCTAACA+GGG | + | chr4_3:1748129-1748148 | Msa0623950:intron | 45.0% | |
| TATGGCGTGTATTAAGGGTG+AGG | - | chr4_3:1749944-1749963 | None:intergenic | 45.0% | |
| GAAATGGGAGGGAAAAAGCT+AGG | - | chr4_3:1750338-1750357 | None:intergenic | 45.0% | |
| TATTGCATGACAAAGGGGTG+AGG | - | chr4_3:1750388-1750407 | None:intergenic | 45.0% | |
| !!! | CGTCGCTTTTCTTCATTGGT+TGG | + | chr4_3:1752205-1752224 | Msa0623950:intron | 45.0% |
| GATCATTTATTGTGCGGCGA+GGG | + | chr4_3:1752375-1752394 | Msa0623950:intron | 45.0% | |
| ATCATTTATTGTGCGGCGAG+GGG | + | chr4_3:1752376-1752395 | Msa0623950:intron | 45.0% | |
| TTCATATGCTTCTTGCGCAG+TGG | + | chr4_3:1752814-1752833 | Msa0623950:intron | 45.0% | |
| CATGCATGCCGTAGCATTAT+TGG | + | chr4_3:1752861-1752880 | Msa0623950:intron | 45.0% | |
| ! | GCCGTAGCATTATTGGTTGT+AGG | + | chr4_3:1752868-1752887 | Msa0623950:intron | 45.0% |
| CAATGTATGCTACCGACATG+AGG | - | chr4_3:1753073-1753092 | None:intergenic | 45.0% | |
| CTCATGTCGGTAGCATACAT+TGG | + | chr4_3:1753071-1753090 | Msa0623950:intron | 45.0% | |
| AAATGTTAACCGGTGTTCCG+GGG | + | chr4_3:1753430-1753449 | Msa0623950:intron | 45.0% | |
| ACTCAATGTGAGTGGATGTC+TGG | + | chr4_3:1754036-1754055 | Msa0623950:intron | 45.0% | |
| CCCCATCTGAAGAGAATTTG+AGG | + | chr4_3:1754158-1754177 | Msa0623950:intron | 45.0% | |
| GGTATAAAGAGTGACGGTTG+AGG | + | chr4_3:1754179-1754198 | Msa0623950:intron | 45.0% | |
| !! | GTCTAATTTGGTGTTGGTGC+AGG | + | chr4_3:1755233-1755252 | Msa0623950:intron | 45.0% |
| GAAAGAACTTGGAGAGCCTT+TGG | + | chr4_3:1755467-1755486 | Msa0623950:intron | 45.0% | |
| ! | ATTGCTGCAGAGGTTTGGTT+TGG | - | chr4_3:1755543-1755562 | None:intergenic | 45.0% |
| CACCATTTCATGTGGAAGCA+AGG | + | chr4_3:1755609-1755628 | Msa0623950:intron | 45.0% | |
| ACCCTTGCTTCCACATGAAA+TGG | - | chr4_3:1755614-1755633 | None:intergenic | 45.0% | |
| !! | ATGTGGAAGCAAGGGTGTTA+GGG | + | chr4_3:1755618-1755637 | Msa0623950:intron | 45.0% |
| ! | GATCCAATCTCAGAAGTGCA+AGG | + | chr4_3:1755658-1755677 | Msa0623950:intron | 45.0% |
| !! | ATCCCTTGCACTTCTGAGAT+TGG | - | chr4_3:1755664-1755683 | None:intergenic | 45.0% |
| !! | AAGATTAATATTAAATATAA+TGG | - | chr4_3:1746512-1746531 | None:intergenic | 5.0% |
| !!! | ATAAATAAATTTTTAAAATG+AGG | - | chr4_3:1746743-1746762 | None:intergenic | 5.0% |
| !! | ATTATATTGAATAAAAATAA+AGG | - | chr4_3:1751329-1751348 | None:intergenic | 5.0% |
| !!! | AATTTGTTTATAATTAAAAA+CGG | - | chr4_3:1753495-1753514 | None:intergenic | 5.0% |
| !!! | AAATTTTGATTTAAAAAAAT+AGG | + | chr4_3:1753697-1753716 | Msa0623950:intron | 5.0% |
| !!! | AAGTTTTTTAAATTTTAAAT+AGG | - | chr4_3:1754732-1754751 | None:intergenic | 5.0% |
| !! | TTAAAATTTAAAAAACTTAA+AGG | + | chr4_3:1754734-1754753 | Msa0623950:intron | 5.0% |
| ATCGCTACAGAGGTCTGGTT+TGG | - | chr4_3:1745928-1745947 | None:intergenic | 50.0% | |
| AGGAATCGTCATCGCTACAG+AGG | - | chr4_3:1745938-1745957 | None:intergenic | 50.0% | |
| ! | TGAGCTTGGCTCAGTTGGTA+TGG | - | chr4_3:1746300-1746319 | None:intergenic | 50.0% |
| TGAGTAAGTCCTCGTGAGCT+TGG | - | chr4_3:1746314-1746333 | None:intergenic | 50.0% | |
| AAGCTCACGAGGACTTACTC+AGG | + | chr4_3:1746313-1746332 | Msa0623950:intron | 50.0% | |
| TCACGAGGACTTACTCAGGT+AGG | + | chr4_3:1746317-1746336 | Msa0623950:intron | 50.0% | |
| CACGAGGACTTACTCAGGTA+GGG | + | chr4_3:1746318-1746337 | Msa0623950:intron | 50.0% | |
| ! | AAGGTGGATTTCTCGCACTG+TGG | + | chr4_3:1746907-1746926 | Msa0623950:intron | 50.0% |
| ! | AGGTGGATTTCTCGCACTGT+GGG | + | chr4_3:1746908-1746927 | Msa0623950:intron | 50.0% |
| AGGTAGAGCGACAAGGTCAA+AGG | + | chr4_3:1746950-1746969 | Msa0623950:intron | 50.0% | |
| ACACGAAAACGACGGATCAG+AGG | - | chr4_3:1747753-1747772 | None:intergenic | 50.0% | |
| GATGGTAGCTTAGGGCTAAC+AGG | + | chr4_3:1748128-1748147 | Msa0623950:intron | 50.0% | |
| CAACCACCACATCATCGTTG+GGG | - | chr4_3:1748704-1748723 | None:intergenic | 50.0% | |
| GCAACCACCACATCATCGTT+GGG | - | chr4_3:1748705-1748724 | None:intergenic | 50.0% | |
| AGCAACCACCACATCATCGT+TGG | - | chr4_3:1748706-1748725 | None:intergenic | 50.0% | |
| GTGGTTGCTTCTGTTTCAGC+AGG | + | chr4_3:1748717-1748736 | Msa0623950:intron | 50.0% | |
| ACTCTCCAGAAGGACATGAC+TGG | + | chr4_3:1748956-1748975 | Msa0623950:intron | 50.0% | |
| AAGGGTGAGGAGGTCAAAAC+TGG | - | chr4_3:1749931-1749950 | None:intergenic | 50.0% | |
| GACTATGCTGACCCATGAGA+GGG | - | chr4_3:1750882-1750901 | None:intergenic | 50.0% | |
| TGACTATGCTGACCCATGAG+AGG | - | chr4_3:1750883-1750902 | None:intergenic | 50.0% | |
| CTCATGGGTCAGCATAGTCA+AGG | + | chr4_3:1750883-1750902 | Msa0623950:intron | 50.0% | |
| GGATCATTTATTGTGCGGCG+AGG | + | chr4_3:1752374-1752393 | Msa0623950:intron | 50.0% | |
| GGTAGACTGTTCCGTCATGT+GGG | + | chr4_3:1752937-1752956 | Msa0623950:intron | 50.0% | |
| ! | GTGCATTGGCATGTGTGAAG+TGG | + | chr4_3:1753357-1753376 | Msa0623950:intron | 50.0% |
| AATGTTAACCGGTGTTCCGG+GGG | + | chr4_3:1753431-1753450 | Msa0623950:intron | 50.0% | |
| !! | GTGAGAGAGTACCGTGAGAT+TGG | - | chr4_3:1754928-1754947 | None:intergenic | 50.0% |
| TTGGTGCAGGTTCAACTTGC+CGG | + | chr4_3:1755246-1755265 | Msa0623950:intron | 50.0% | |
| CCAAACCTCTGCAGCAATGA+CGG | + | chr4_3:1755545-1755564 | Msa0623950:CDS | 50.0% | |
| !! | CATGTGGAAGCAAGGGTGTT+AGG | + | chr4_3:1755617-1755636 | Msa0623950:intron | 50.0% |
| TCCGAGTTCGAACTCAGGTA+GGG | + | chr4_3:1755819-1755838 | Msa0623950:intron | 50.0% | |
| TCCCTACCTGAGTTCGAACT+CGG | - | chr4_3:1755823-1755842 | None:intergenic | 50.0% | |
| TCGTCATCGCTACAGAGGTC+TGG | - | chr4_3:1745933-1745952 | None:intergenic | 55.0% | |
| CATCGTGAGGTAGAGCGACA+AGG | + | chr4_3:1746943-1746962 | Msa0623950:intron | 55.0% | |
| CCTTGGTTTCTGAATGGCGC+TGG | - | chr4_3:1747147-1747166 | None:intergenic | 55.0% | |
| CCAGCGCCATTCAGAAACCA+AGG | + | chr4_3:1747144-1747163 | Msa0623950:intron | 55.0% | |
| AACTCCAGTCACTGGGAGCT+CGG | + | chr4_3:1747944-1747963 | Msa0623950:intron | 55.0% | |
| CATGCTCCCCAACGATGATG+TGG | + | chr4_3:1748695-1748714 | Msa0623950:intron | 55.0% | |
| GCGTTCCAGTCATGTCCTTC+TGG | - | chr4_3:1748964-1748983 | None:intergenic | 55.0% | |
| GGCGTGTATTAAGGGTGAGG+AGG | - | chr4_3:1749941-1749960 | None:intergenic | 55.0% | |
| TGCATGACAAAGGGGTGAGG+AGG | - | chr4_3:1750385-1750404 | None:intergenic | 55.0% | |
| ! | CCTTGCGCTTGCTAAGGGTT+GGG | - | chr4_3:1752438-1752457 | None:intergenic | 55.0% |
| ! | ACCTTGCGCTTGCTAAGGGT+TGG | - | chr4_3:1752439-1752458 | None:intergenic | 55.0% |
| ! | GCTCACCTTGCGCTTGCTAA+GGG | - | chr4_3:1752443-1752462 | None:intergenic | 55.0% |
| ! | AGCTCACCTTGCGCTTGCTA+AGG | - | chr4_3:1752444-1752463 | None:intergenic | 55.0% |
| CGCAAGGTGAGCTACGACAT+CGG | + | chr4_3:1752451-1752470 | Msa0623950:intron | 55.0% | |
| GCAAGGTGAGCTACGACATC+GGG | + | chr4_3:1752452-1752471 | Msa0623950:intron | 55.0% | |
| GGGTAGACTGTTCCGTCATG+TGG | + | chr4_3:1752936-1752955 | Msa0623950:intron | 55.0% | |
| ATTGGGCCGCATGACTACAC+TGG | + | chr4_3:1753089-1753108 | Msa0623950:intron | 55.0% | |
| TTGGGCCGCATGACTACACT+GGG | + | chr4_3:1753090-1753109 | Msa0623950:intron | 55.0% | |
| AGGGACCCAGTGTAGTCATG+CGG | - | chr4_3:1753098-1753117 | None:intergenic | 55.0% | |
| ! | GTCTTGTTAACCAGTGCCCC+CGG | - | chr4_3:1753450-1753469 | None:intergenic | 55.0% |
| CCGTCATTGCTGCAGAGGTT+TGG | - | chr4_3:1755548-1755567 | None:intergenic | 55.0% | |
| AGGAACCGTCATTGCTGCAG+AGG | - | chr4_3:1755553-1755572 | None:intergenic | 55.0% | |
| GTCCGAGTTCGAACTCAGGT+AGG | + | chr4_3:1755818-1755837 | Msa0623950:intron | 55.0% | |
| AAGGTTCGGGGTTCGAACCC+CGG | - | chr4_3:1746258-1746277 | None:intergenic | 60.0% | |
| CCTCGTGAGCTTGGCTCAGT+TGG | - | chr4_3:1746305-1746324 | None:intergenic | 60.0% | |
| CCAACTGAGCCAAGCTCACG+AGG | + | chr4_3:1746302-1746321 | Msa0623950:intron | 60.0% | |
| ! | CTCGCACTGTGGGCTGTGAT+CGG | + | chr4_3:1746918-1746937 | Msa0623950:intron | 60.0% |
| TCAACCGAGCTCCCAGTGAC+TGG | - | chr4_3:1747951-1747970 | None:intergenic | 60.0% | |
| GCTCCCCAACGATGATGTGG+TGG | + | chr4_3:1748698-1748717 | Msa0623950:intron | 60.0% | |
| CCCAACCCTTAGCAAGCGCA+AGG | + | chr4_3:1752435-1752454 | Msa0623950:intron | 60.0% | |
| GGGTGTCCGAGTTCGAACTC+AGG | + | chr4_3:1755814-1755833 | Msa0623950:intron | 60.0% | |
| GCTGTGATCGGCGCATCGTG+AGG | + | chr4_3:1746930-1746949 | Msa0623950:intron | 65.0% | |
| GGTTGGATCCGTGCGTCGCA+CGG | + | chr4_3:1752222-1752241 | Msa0623950:intron | 65.0% | |
| GTTGGATCCGTGCGTCGCAC+GGG | + | chr4_3:1752223-1752242 | Msa0623950:intron | 65.0% | |
| ACATCGACCCGTGCGACGCA+CGG | - | chr4_3:1752233-1752252 | None:intergenic | 65.0% | |
| AACCAGTGCCCCCGGAACAC+CGG | - | chr4_3:1753442-1753461 | None:intergenic | 65.0% | |
| ! | AACCGGTGTTCCGGGGGCAC+TGG | + | chr4_3:1753437-1753456 | Msa0623950:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 1745855 | 1756169 | 1745855 | ID=Msa0623950;Name=Msa0623950 |
| chr4_3 | mRNA | 1745855 | 1756169 | 1745855 | ID=Msa0623950-mRNA-1;Parent=Msa0623950;Name=Msa0623950-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|0|0.33|1|0|0|3|19|103 |
| chr4_3 | exon | 1745855 | 1746004 | 1745855 | ID=Msa0623950-mRNA-1:exon:475;Parent=Msa0623950-mRNA-1 |
| chr4_3 | exon | 1755518 | 1755596 | 1755518 | ID=Msa0623950-mRNA-1:exon:476;Parent=Msa0623950-mRNA-1 |
| chr4_3 | exon | 1756068 | 1756169 | 1756068 | ID=Msa0623950-mRNA-1:exon:477;Parent=Msa0623950-mRNA-1 |
| chr4_3 | CDS | 1745855 | 1746004 | 1745855 | ID=Msa0623950-mRNA-1:cds;Parent=Msa0623950-mRNA-1 |
| chr4_3 | CDS | 1755518 | 1755596 | 1755518 | ID=Msa0623950-mRNA-1:cds;Parent=Msa0623950-mRNA-1 |
| chr4_3 | CDS | 1756068 | 1756150 | 1756068 | ID=Msa0623950-mRNA-1:cds;Parent=Msa0623950-mRNA-1 |
| chr4_3 | three_prime_UTR | 1756151 | 1756169 | 1756151 | ID=Msa0623950-mRNA-1:three_prime_utr;Parent=Msa0623950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
