AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0624210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0624210 MtrunA17_Chr8g0354571 58.203 512 154 4 11 465 16 524 0.0 607
Msa0624210 MtrunA17_Chr8g0354531 58.674 513 151 5 10 465 137 645 0.0 603
Msa0624210 MtrunA17_Chr8g0354511 58.594 512 152 4 11 465 16 524 0.0 594
Msa0624210 MtrunA17_Chr2g0313751 51.670 509 191 4 11 465 36 543 0.0 538
Msa0624210 MtrunA17_Chr2g0313821 50.581 516 201 2 4 465 1 516 0.0 532
Msa0624210 MtrunA17_Chr2g0313801 50.969 516 199 2 4 465 1 516 0.0 532
Msa0624210 MtrunA17_Chr2g0313761 57.110 429 179 2 41 465 84 511 0.0 527
Msa0624210 MtrunA17_Chr2g0313781 49.811 528 199 3 4 465 1 528 0.0 525
Msa0624210 MtrunA17_Chr2g0313771 57.783 424 175 2 45 465 101 523 0.0 520
Msa0624210 MtrunA17_Chr2g0313831 49.711 519 204 3 1 465 1 516 0.0 518
Msa0624210 MtrunA17_Chr2g0313791 50.194 516 198 3 4 465 1 511 0.0 517
Msa0624210 MtrunA17_Chr5g0446131 50.588 510 195 4 11 465 7 514 0.0 516
Msa0624210 MtrunA17_Chr2g0313811 56.393 438 175 2 44 465 91 528 5.31e-180 514
Msa0624210 MtrunA17_Chr2g0307301 48.527 509 207 3 11 465 11 518 2.60e-178 509
Msa0624210 MtrunA17_Chr2g0307291 48.256 516 207 5 9 465 4 518 1.16e-174 500
Msa0624210 MtrunA17_Chr2g0288661 47.308 520 217 5 1 465 1 518 1.05e-173 498
Msa0624210 MtrunA17_Chr4g0014051 43.436 518 235 4 4 465 13 528 1.61e-147 431
Msa0624210 MtrunA17_Chr1g0193811 39.627 429 246 6 45 465 93 516 1.73e-102 315
Msa0624210 MtrunA17_Chr4g0063221 40.416 433 238 7 45 465 95 519 1.51e-98 305
Msa0624210 MtrunA17_Chr8g0354541 73.596 178 47 0 288 465 1 178 2.12e-96 288
Msa0624210 MtrunA17_Chr7g0262111 39.486 428 239 8 45 465 91 505 3.95e-95 296
Msa0624210 MtrunA17_Chr6g0457421 35.116 430 257 7 45 465 91 507 1.28e-91 287
Msa0624210 MtrunA17_Chr1g0154731 36.449 428 252 8 45 465 89 503 3.57e-90 283
Msa0624210 MtrunA17_Chr7g0215181 35.484 434 250 9 45 465 93 509 6.52e-90 283
Msa0624210 MtrunA17_Chr7g0235261 35.714 434 261 9 42 465 85 510 3.90e-88 278
Msa0624210 MtrunA17_Chr4g0004601 34.419 430 265 8 45 465 110 531 1.13e-86 275
Msa0624210 MtrunA17_Chr8g0354561 45.260 327 99 5 11 280 98 401 1.72e-85 268
Msa0624210 MtrunA17_Chr1g0203141 34.722 432 266 7 42 465 92 515 3.26e-85 271
Msa0624210 MtrunA17_Chr1g0203151 33.565 432 271 7 42 465 88 511 2.66e-80 258
Msa0624210 MtrunA17_Chr3g0128461 34.913 401 241 5 75 464 132 523 2.85e-80 258
Msa0624210 MtrunA17_Chr8g0362731 33.894 416 258 9 59 465 1 408 1.21e-79 253
Msa0624210 MtrunA17_Chr6g0472221 34.722 432 268 7 42 465 101 526 5.52e-78 252
Msa0624210 MtrunA17_Chr8g0336361 32.823 457 260 8 52 465 106 558 5.81e-77 250
Msa0624210 MtrunA17_Chr6g0479681 32.366 448 271 8 42 465 90 529 4.06e-76 247
Msa0624210 MtrunA17_Chr8g0364081 34.977 426 251 12 63 465 119 541 9.33e-74 241
Msa0624210 MtrunA17_Chr2g0308651 35.385 390 237 7 91 465 26 415 3.64e-72 234
Msa0624210 MtrunA17_Chr1g0179811 25.926 432 280 11 58 464 122 538 4.58e-36 140
Msa0624210 MtrunA17_Chr1g0182861 39.855 138 83 0 328 465 26 163 6.67e-36 130
Msa0624210 MtrunA17_Chr6g0472171 39.130 138 84 0 328 465 21 158 8.11e-36 130
Msa0624210 MtrunA17_Chr5g0396521 26.173 405 232 10 91 440 152 544 1.61e-34 135
Msa0624210 MtrunA17_Chr0c19g0493771 25.616 406 262 13 58 439 232 621 1.35e-32 131
Msa0624210 MtrunA17_Chr5g0403351 25.328 458 289 15 15 443 43 476 2.56e-29 120
Msa0624210 MtrunA17_Chr5g0445531 25.234 428 284 12 37 445 64 474 3.22e-27 114
Msa0624210 MtrunA17_Chr3g0108651 47.959 98 51 0 350 447 1 98 8.22e-27 104
Msa0624210 MtrunA17_Chr3g0101631 24.194 434 283 13 36 445 60 471 2.16e-26 111
Msa0624210 MtrunA17_Chr4g0024771 23.874 444 302 13 36 461 63 488 8.84e-26 109
Msa0624210 MtrunA17_Chr5g0445441 26.157 432 281 14 34 444 101 515 1.22e-25 109
Msa0624210 MtrunA17_Chr5g0445451 26.807 429 277 13 37 445 64 475 2.02e-25 108
Msa0624210 MtrunA17_Chr6g0472161 28.425 292 194 6 42 325 88 372 2.77e-25 107
Msa0624210 MtrunA17_Chr4g0058231 25.285 439 291 16 27 438 41 469 4.70e-25 107
Msa0624210 MtrunA17_Chr4g0058191 26.107 429 275 18 35 438 47 458 4.88e-25 107
Msa0624210 MtrunA17_Chr3g0101601 25.587 426 274 18 36 438 60 465 5.74e-25 107
Msa0624210 MtrunA17_Chr4g0020041 22.098 448 311 15 35 461 60 490 8.85e-25 107
Msa0624210 MtrunA17_Chr5g0445381 25.446 448 278 12 36 445 94 523 1.64e-24 106
Msa0624210 MtrunA17_Chr8g0372251 29.021 286 183 7 146 415 169 450 1.81e-24 106
Msa0624210 MtrunA17_Chr1g0162811 22.172 442 316 12 35 461 60 488 3.46e-24 105
Msa0624210 MtrunA17_Chr3g0101621 25.058 431 281 17 36 445 57 466 4.54e-24 104
Msa0624210 MtrunA17_Chr5g0445461 25.116 430 281 14 37 444 64 474 7.15e-24 104
Msa0624210 MtrunA17_Chr1g0184421 25.666 413 255 15 82 464 113 503 1.05e-23 103
Msa0624210 MtrunA17_Chr4g0035921 25.115 434 290 13 37 443 61 486 1.06e-23 103
Msa0624210 MtrunA17_Chr6g0449331 25.000 468 297 22 39 464 59 514 1.14e-23 103
Msa0624210 MtrunA17_Chr5g0403331 25.058 431 284 14 37 443 62 477 1.36e-23 103
Msa0624210 MtrunA17_Chr5g0405001 25.000 328 229 7 125 438 157 481 1.40e-23 103
Msa0624210 MtrunA17_Chr6g0449341 24.359 468 300 18 39 464 107 562 1.67e-23 103
Msa0624210 MtrunA17_Chr1g0174461 25.240 416 271 17 53 441 76 478 2.42e-23 102
Msa0624210 MtrunA17_Chr3g0101731 22.970 431 299 13 35 445 59 476 3.29e-23 102
Msa0624210 MtrunA17_Chr4g0038271 23.077 442 293 13 58 464 130 559 4.51e-23 102
Msa0624210 MtrunA17_Chr3g0101691 24.122 427 287 15 35 438 61 473 7.17e-23 101
Msa0624210 MtrunA17_Chr7g0246221 24.083 436 289 11 35 443 56 476 1.01e-22 100
Msa0624210 MtrunA17_Chr5g0445421 23.241 469 300 12 8 445 89 528 1.57e-22 100
Msa0624210 MtrunA17_Chr3g0101701 23.462 439 289 15 35 445 61 480 1.81e-22 100
Msa0624210 MtrunA17_Chr3g0116741 22.748 444 301 17 16 441 67 486 2.22e-22 99.8
Msa0624210 MtrunA17_Chr8g0351391 24.153 443 276 18 57 461 87 507 2.58e-22 99.8
Msa0624210 MtrunA17_Chr1g0182871 31.276 243 156 5 91 329 27 262 3.05e-22 95.9
Msa0624210 MtrunA17_Chr3g0101671 23.448 435 296 15 34 445 60 480 3.11e-22 99.4
Msa0624210 MtrunA17_Chr8g0380471 26.980 404 234 14 82 463 110 474 3.24e-22 99.0
Msa0624210 MtrunA17_Chr4g0058261 24.054 370 243 13 90 438 147 499 5.29e-22 99.0
Msa0624210 MtrunA17_Chr6g0465511 24.429 438 286 14 34 444 56 475 6.79e-22 98.2
Msa0624210 MtrunA17_Chr6g0466331 24.429 438 286 14 34 444 56 475 8.00e-22 98.2
Msa0624210 MtrunA17_Chr8g0334891 23.714 350 233 11 105 442 133 460 1.32e-21 97.4
Msa0624210 MtrunA17_Chr7g0260831 22.273 440 288 15 57 464 84 501 1.44e-21 97.4
Msa0624210 MtrunA17_Chr6g0449381 23.467 473 308 18 29 464 49 504 1.45e-21 97.4
Msa0624210 MtrunA17_Chr7g0248991 25.161 310 214 8 91 389 49 351 1.55e-21 95.9
Msa0624210 MtrunA17_Chr5g0431671 23.488 430 290 12 37 445 65 476 1.63e-21 97.1
Msa0624210 MtrunA17_Chr8g0361471 24.826 431 281 14 34 438 56 469 1.77e-21 97.1
Msa0624210 MtrunA17_Chr8g0351461 25.604 414 258 17 61 439 84 482 1.90e-21 97.1
Msa0624210 MtrunA17_Chr4g0058201 27.187 320 204 11 140 443 159 465 2.42e-21 96.7
Msa0624210 MtrunA17_Chr3g0101711 22.973 370 247 13 97 445 127 479 3.17e-21 96.3
Msa0624210 MtrunA17_Chr3g0119681 24.121 398 241 10 78 434 109 486 3.45e-21 96.3
Msa0624210 MtrunA17_Chr7g0255531 24.939 413 269 13 50 436 65 462 4.42e-21 95.9
Msa0624210 MtrunA17_Chr4g0058281 24.528 371 240 14 90 438 129 481 5.36e-21 95.5
Msa0624210 MtrunA17_Chr8g0390881 23.908 435 303 14 27 441 49 475 5.38e-21 95.5
Msa0624210 MtrunA17_Chr8g0351311 23.007 439 287 15 57 461 87 508 6.72e-21 95.5
Msa0624210 MtrunA17_Chr4g0047641 24.208 442 299 15 19 438 57 484 7.42e-21 95.1
Msa0624210 MtrunA17_Chr5g0419451 23.858 394 269 14 58 434 105 484 7.84e-21 95.1
Msa0624210 MtrunA17_Chr5g0403321 24.725 364 237 11 97 438 126 474 1.22e-20 94.7
Msa0624210 MtrunA17_Chr3g0101811 23.297 455 311 16 35 461 60 504 1.24e-20 94.7
Msa0624210 MtrunA17_Chr8g0351401 25.275 455 282 19 43 457 66 502 1.38e-20 94.4
Msa0624210 MtrunA17_Chr6g0463791 23.923 418 272 14 53 445 78 474 1.41e-20 94.4
Msa0624210 MtrunA17_Chr5g0431641 23.902 410 281 12 53 445 80 475 1.54e-20 94.4
Msa0624210 MtrunA17_Chr3g0101661 22.248 427 304 13 35 443 61 477 2.10e-20 94.0
Msa0624210 MtrunA17_Chr4g0026941 25.180 417 249 16 58 434 114 507 2.68e-20 93.6
Msa0624210 MtrunA17_Chr3g0101721 23.060 451 304 15 35 461 60 491 2.68e-20 93.6
Msa0624210 MtrunA17_Chr2g0280081 26.575 365 234 14 94 436 120 472 2.98e-20 94.4
Msa0624210 MtrunA17_Chr2g0280081 28.571 294 179 12 164 436 690 973 2.05e-19 91.7
Msa0624210 MtrunA17_Chr4g0058211 31.461 178 119 3 263 438 10 186 3.67e-20 89.0
Msa0624210 MtrunA17_Chr1g0156101 23.028 469 295 16 28 457 55 496 4.31e-20 92.8
Msa0624210 MtrunA17_Chr3g0101571 23.799 437 287 18 35 445 58 474 4.61e-20 92.8
Msa0624210 MtrunA17_Chr1g0174451 25.522 431 289 16 50 456 74 496 5.24e-20 92.8
Msa0624210 MtrunA17_Chr1g0151221 23.983 467 282 18 53 464 79 527 5.69e-20 92.8
Msa0624210 MtrunA17_Chr8g0364651 27.500 240 162 6 207 439 235 469 5.84e-20 92.4
Msa0624210 MtrunA17_Chr4g0076161 22.482 427 287 11 37 438 64 471 5.94e-20 92.4
Msa0624210 MtrunA17_Chr1g0163491 22.736 497 310 18 15 464 51 520 8.70e-20 92.0
Msa0624210 MtrunA17_Chr6g0484811 23.583 441 305 15 20 438 43 473 1.01e-19 91.7
Msa0624210 MtrunA17_Chr8g0390871 30.588 170 116 2 274 441 28 197 1.05e-19 87.8
Msa0624210 MtrunA17_Chr4g0052861 24.434 442 282 17 33 445 50 468 1.16e-19 91.7
Msa0624210 MtrunA17_Chr1g0164321 22.616 451 303 14 51 464 105 546 1.50e-19 91.3
Msa0624210 MtrunA17_Chr6g0463801 24.413 426 292 11 36 445 61 472 1.58e-19 91.3
Msa0624210 MtrunA17_Chr1g0204271 23.834 386 233 14 91 439 118 479 1.72e-19 90.9
Msa0624210 MtrunA17_Chr7g0227281 30.882 204 120 5 275 464 297 493 2.02e-19 90.9
Msa0624210 MtrunA17_Chr1g0205361 24.342 456 288 17 20 443 40 470 3.89e-19 90.1
Msa0624210 MtrunA17_Chr1g0163451 27.473 273 166 10 208 464 267 523 4.63e-19 89.7
Msa0624210 MtrunA17_Chr4g0047661 22.323 439 300 16 27 438 61 485 4.86e-19 89.7
Msa0624210 MtrunA17_Chr5g0446161 22.947 414 278 14 53 445 82 475 5.70e-19 89.4
Msa0624210 MtrunA17_Chr2g0321171 24.831 443 260 15 58 462 88 495 6.55e-19 89.4
Msa0624210 MtrunA17_Chr2g0280011 30.928 194 124 4 265 449 1 193 6.67e-19 85.1
Msa0624210 MtrunA17_Chr3g0101611 24.459 462 268 20 37 445 62 495 7.13e-19 89.4
Msa0624210 MtrunA17_Chr7g0225531 23.571 420 267 13 78 464 112 510 7.32e-19 89.4
Msa0624210 MtrunA17_Chr8g0387101 31.746 189 118 5 260 438 289 476 7.68e-19 89.0
Msa0624210 MtrunA17_Chr4g0052851 25.866 433 274 20 35 447 56 461 7.73e-19 89.0
Msa0624210 MtrunA17_Chr8g0344151 24.714 437 288 15 35 445 58 479 8.33e-19 89.0
Msa0624210 MtrunA17_Chr8g0351421 25.526 380 238 15 91 439 118 483 8.52e-19 89.0
Msa0624210 MtrunA17_Chr8g0334941 24.534 322 209 11 129 438 2 301 8.95e-19 87.4
Msa0624210 MtrunA17_Chr1g0163391 24.236 458 262 19 58 464 78 501 9.11e-19 89.0
Msa0624210 MtrunA17_Chr8g0351441 24.538 379 243 12 91 439 117 482 9.13e-19 89.0
Msa0624210 MtrunA17_Chr4g0046331 24.661 442 278 17 37 444 60 480 9.19e-19 89.0
Msa0624210 MtrunA17_Chr4g0047631 24.658 438 285 19 27 438 62 480 9.23e-19 89.0
Msa0624210 MtrunA17_Chr5g0431591 25.083 303 205 7 155 445 1 293 9.36e-19 87.0
Msa0624210 MtrunA17_Chr1g0163371 29.515 227 137 7 253 464 3 221 1.07e-18 84.7
Msa0624210 MtrunA17_Chr4g0004481 22.961 466 285 17 44 465 57 492 1.15e-18 88.6
Msa0624210 MtrunA17_Chr1g0174441 23.179 453 305 16 19 441 61 500 1.22e-18 88.6
Msa0624210 MtrunA17_Chr8g0387001 22.717 449 295 12 49 463 73 503 1.26e-18 88.6
Msa0624210 MtrunA17_Chr1g0174481 28.916 249 157 9 202 441 236 473 1.28e-18 88.2
Msa0624210 MtrunA17_Chr1g0163281 22.353 425 263 12 81 464 120 518 1.31e-18 88.6
Msa0624210 MtrunA17_Chr8g0377341 25.622 402 262 15 53 434 109 493 1.43e-18 88.2
Msa0624210 MtrunA17_Chr7g0227291 22.912 467 290 16 40 464 55 493 1.52e-18 88.2
Msa0624210 MtrunA17_Chr7g0255131 22.581 465 276 18 49 463 76 506 1.62e-18 88.2
Msa0624210 MtrunA17_Chr3g0084921 24.153 472 296 22 5 441 38 482 1.82e-18 87.8
Msa0624210 MtrunA17_Chr5g0446151 22.611 429 296 12 36 445 65 476 2.01e-18 87.8
Msa0624210 MtrunA17_Chr4g0067191 23.312 459 281 16 60 464 73 514 2.44e-18 87.4
Msa0624210 MtrunA17_Chr4g0046351 23.409 440 284 15 37 444 60 478 2.80e-18 87.4
Msa0624210 MtrunA17_Chr6g0449361 22.453 481 303 21 30 464 46 502 2.98e-18 87.4
Msa0624210 MtrunA17_Chr2g0280071 26.829 328 215 10 128 438 188 507 4.06e-18 87.4
Msa0624210 MtrunA17_Chr6g0451751 24.601 313 200 10 146 434 189 489 4.30e-18 87.0
Msa0624210 MtrunA17_Chr7g0265611 25.926 297 205 8 154 441 198 488 4.31e-18 86.7
Msa0624210 MtrunA17_Chr3g0101821 23.598 428 291 12 35 440 58 471 4.54e-18 86.7
Msa0624210 MtrunA17_Chr4g0047691 23.611 432 297 16 27 438 65 483 4.61e-18 86.7
Msa0624210 MtrunA17_Chr6g0449351 22.269 476 311 20 29 465 8 463 4.86e-18 86.3
Msa0624210 MtrunA17_Chr1g0162801 22.768 448 309 14 35 461 60 491 6.21e-18 86.3
Msa0624210 MtrunA17_Chr2g0307321 41.935 93 50 1 119 207 1 93 6.39e-18 79.3
Msa0624210 MtrunA17_Chr3g0101751 23.385 449 305 12 35 461 65 496 7.75e-18 85.9
Msa0624210 MtrunA17_Chr3g0101761 23.163 449 306 13 35 461 58 489 8.00e-18 85.9
Msa0624210 MtrunA17_Chr7g0246151 25.100 251 176 5 193 439 229 471 8.12e-18 85.9
Msa0624210 MtrunA17_Chr4g0053621 24.084 382 240 13 93 447 116 474 9.47e-18 85.9
Msa0624210 MtrunA17_Chr1g0164211 24.706 255 177 6 193 443 224 467 1.08e-17 85.5
Msa0624210 MtrunA17_Chr2g0280121 26.158 367 239 13 94 438 124 480 1.13e-17 85.5
Msa0624210 MtrunA17_Chr8g0380501 23.810 462 291 18 41 464 52 490 1.29e-17 85.1
Msa0624210 MtrunA17_Chr7g0235551 24.714 437 294 15 35 445 56 483 1.49e-17 85.1
Msa0624210 MtrunA17_Chr3g0101651 22.740 365 254 11 97 445 128 480 1.54e-17 85.1
Msa0624210 MtrunA17_Chr1g0198191 27.600 250 166 8 196 434 236 481 1.63e-17 85.1
Msa0624210 MtrunA17_Chr6g0472311 27.919 197 137 4 253 445 296 491 1.71e-17 85.1
Msa0624210 MtrunA17_Chr5g0430071 24.092 303 211 9 176 465 54 350 2.39e-17 83.6
Msa0624210 MtrunA17_Chr3g0101801 23.516 438 289 14 35 445 65 483 2.50e-17 84.3
Msa0624210 MtrunA17_Chr3g0101581 21.903 452 310 13 37 460 61 497 2.88e-17 84.3
Msa0624210 MtrunA17_Chr7g0260821 21.792 413 261 17 57 434 85 470 3.26e-17 84.0
Msa0624210 MtrunA17_Chr5g0430031 23.193 332 235 10 146 465 174 497 3.39e-17 84.0
Msa0624210 MtrunA17_Chr1g0163421 22.247 454 295 17 51 464 104 539 3.67e-17 84.0
Msa0624210 MtrunA17_Chr8g0339331 21.875 416 289 11 53 441 81 487 3.94e-17 84.0
Msa0624210 MtrunA17_Chr5g0430081 22.484 467 331 17 18 465 41 495 4.29e-17 83.6
Msa0624210 MtrunA17_Chr1g0184461 24.205 409 264 14 83 464 114 503 4.44e-17 83.6
Msa0624210 MtrunA17_Chr7g0258211 21.798 445 298 14 34 445 60 487 5.32e-17 83.6
Msa0624210 MtrunA17_Chr1g0200951 21.163 430 288 14 53 452 105 513 6.09e-17 83.2
Msa0624210 MtrunA17_Chr1g0174431 27.835 194 125 4 272 451 1 193 7.23e-17 79.3
Msa0624210 MtrunA17_Chr8g0362481 22.749 422 285 16 50 443 3 411 7.25e-17 82.8
Msa0624210 MtrunA17_Chr5g0431511 21.831 426 302 15 39 443 60 475 7.95e-17 82.8
Msa0624210 MtrunA17_Chr4g0046321 22.353 425 297 12 37 438 60 474 8.01e-17 82.8
Msa0624210 MtrunA17_Chr5g0431501 26.291 213 148 4 235 445 272 477 8.24e-17 82.8
Msa0624210 MtrunA17_Chr5g0431461 26.291 213 148 4 235 445 272 477 8.24e-17 82.8
Msa0624210 MtrunA17_Chr8g0351801 23.922 255 179 4 203 443 238 491 9.90e-17 82.8
Msa0624210 MtrunA17_Chr7g0218611 23.853 327 214 11 130 437 157 467 1.18e-16 82.4
Msa0624210 MtrunA17_Chr1g0160861 25.092 271 183 9 198 464 73 327 1.18e-16 80.9
Msa0624210 MtrunA17_Chr1g0197871 28.095 210 139 5 234 441 267 466 1.22e-16 82.0
Msa0624210 MtrunA17_Chr4g0011981 24.746 295 195 9 160 438 181 464 1.34e-16 82.0
Msa0624210 MtrunA17_Chr7g0258221 22.799 443 308 14 37 457 58 488 1.50e-16 82.0
Msa0624210 MtrunA17_Chr5g0400411 25.385 390 262 11 56 437 94 462 1.65e-16 81.6
Msa0624210 MtrunA17_Chr2g0280061 29.897 194 126 4 265 449 1 193 1.83e-16 78.2
Msa0624210 MtrunA17_Chr1g0163501 24.053 449 273 17 58 464 76 498 2.01e-16 81.6
Msa0624210 MtrunA17_Chr6g0458561 22.434 419 280 15 53 441 97 500 2.93e-16 81.3
Msa0624210 MtrunA17_Chr4g0011851 28.144 167 117 3 274 438 18 183 3.69e-16 77.4
Msa0624210 MtrunA17_Chr2g0280041 29.787 188 122 4 260 438 320 506 3.82e-16 80.9
Msa0624210 MtrunA17_Chr5g0446101 26.667 195 140 3 253 445 95 288 4.93e-16 79.0
Msa0624210 MtrunA17_Chr3g0116681 23.877 423 286 15 37 438 64 471 5.44e-16 80.1
Msa0624210 MtrunA17_Chr8g0344191 27.331 311 190 13 158 445 216 513 5.83e-16 80.5
Msa0624210 MtrunA17_Chr4g0052881 23.438 384 243 13 78 434 99 458 5.89e-16 80.1
Msa0624210 MtrunA17_Chr3g0086651 23.114 411 274 14 58 438 76 474 6.05e-16 80.1
Msa0624210 MtrunA17_Chr6g0451681 29.379 177 119 5 263 434 267 442 6.85e-16 79.7
Msa0624210 MtrunA17_Chr6g0463621 24.870 193 136 4 273 460 2 190 6.94e-16 76.3
Msa0624210 MtrunA17_Chr5g0401691 23.873 377 216 11 92 434 135 474 7.68e-16 79.7
Msa0624210 MtrunA17_Chr4g0011961 24.422 303 197 9 154 438 175 463 7.91e-16 79.7
Msa0624210 MtrunA17_Chr1g0178971 25.000 412 255 15 58 438 93 481 8.11e-16 79.7
Msa0624210 MtrunA17_Chr3g0086661 23.114 411 274 14 58 438 76 474 8.35e-16 79.7
Msa0624210 MtrunA17_Chr1g0174471 23.478 460 293 17 15 443 65 496 9.74e-16 79.7
Msa0624210 MtrunA17_Chr1g0163461 29.268 205 122 6 275 464 322 518 9.75e-16 79.7
Msa0624210 MtrunA17_Chr1g0197851 26.104 249 171 6 193 438 225 463 9.78e-16 79.3
Msa0624210 MtrunA17_Chr4g0017411 24.454 458 292 19 18 450 37 465 9.83e-16 79.3
Msa0624210 MtrunA17_Chr7g0224551 23.964 338 219 12 124 438 148 470 1.02e-15 79.3
Msa0624210 MtrunA17_Chr5g0403451 26.222 225 132 6 272 464 56 278 1.27e-15 77.0
Msa0624210 MtrunA17_Chr5g0430131 24.390 246 168 6 202 438 235 471 1.30e-15 79.0
Msa0624210 MtrunA17_Chr8g0357421 22.173 451 306 14 35 461 60 489 1.32e-15 79.0
Msa0624210 MtrunA17_Chr6g0451781 25.763 295 188 9 160 434 239 522 1.37e-15 79.3
Msa0624210 MtrunA17_Chr3g0082701 25.994 327 204 11 135 434 175 490 1.62e-15 79.0
Msa0624210 MtrunA17_Chr1g0197881 26.104 249 171 6 193 438 224 462 1.63e-15 78.6
Msa0624210 MtrunA17_Chr2g0334021 29.082 196 124 4 256 438 277 470 2.02e-15 78.6
Msa0624210 MtrunA17_Chr5g0413911 27.807 187 127 4 255 434 310 495 2.06e-15 78.6
Msa0624210 MtrunA17_Chr1g0163211 28.788 198 121 5 275 464 315 500 2.10e-15 78.6
Msa0624210 MtrunA17_Chr8g0362701 22.989 435 302 14 35 445 57 482 2.15e-15 78.6
Msa0624210 MtrunA17_Chr1g0197891 25.703 249 172 6 193 438 225 463 2.26e-15 78.2
Msa0624210 MtrunA17_Chr3g0135841 22.785 474 284 16 53 464 82 535 2.76e-15 78.2
Msa0624210 MtrunA17_Chr8g0357431 23.198 444 311 14 35 461 60 490 2.95e-15 78.2
Msa0624210 MtrunA17_Chr8g0372711 27.933 179 119 3 264 438 286 458 3.07e-15 77.8
Msa0624210 MtrunA17_Chr5g0395381 26.383 235 156 7 212 443 225 445 3.30e-15 77.8
Msa0624210 MtrunA17_Chr5g0443401 23.443 273 183 6 197 456 219 478 3.47e-15 77.8
Msa0624210 MtrunA17_Chr1g0160851 27.011 174 124 3 272 443 298 470 3.54e-15 77.8
Msa0624210 MtrunA17_Chr7g0246121 25.000 236 167 4 212 445 248 475 3.68e-15 77.8
Msa0624210 MtrunA17_Chr1g0205371 24.107 448 299 14 20 443 41 471 3.95e-15 77.4
Msa0624210 MtrunA17_Chr2g0296661 25.058 431 262 17 50 445 69 473 4.68e-15 77.4
Msa0624210 MtrunA17_Chr4g0039391 29.310 174 119 4 274 445 306 477 4.88e-15 77.4
Msa0624210 MtrunA17_Chr5g0395331 24.138 232 162 5 214 443 258 477 4.99e-15 77.4
Msa0624210 MtrunA17_Chr4g0008101 22.195 410 268 14 64 434 92 489 5.28e-15 77.4
Msa0624210 MtrunA17_Chr1g0167321 22.148 447 313 12 35 461 57 488 5.55e-15 77.0
Msa0624210 MtrunA17_Chr6g0484841 21.818 440 313 12 20 438 43 472 5.74e-15 77.0
Msa0624210 MtrunA17_Chr5g0395321 25.847 236 156 8 212 443 250 470 5.91e-15 77.0
Msa0624210 MtrunA17_Chr8g0356001 26.457 223 147 6 220 438 265 474 6.60e-15 77.0
Msa0624210 MtrunA17_Chr5g0430101 21.895 306 217 9 146 438 173 469 6.76e-15 77.0
Msa0624210 MtrunA17_Chr5g0429651 26.894 264 165 7 220 463 251 506 8.27e-15 76.6
Msa0624210 MtrunA17_Chr3g0094231 28.902 173 117 5 271 438 299 470 8.41e-15 76.6
Msa0624210 MtrunA17_Chr5g0419691 22.785 316 231 4 125 438 160 464 9.39e-15 76.3
Msa0624210 MtrunA17_Chr1g0163351 21.930 456 293 15 51 464 70 504 9.55e-15 76.3
Msa0624210 MtrunA17_Chr5g0400421 28.655 171 112 3 272 437 298 463 1.03e-14 76.3
Msa0624210 MtrunA17_Chr2g0314731 24.710 259 175 7 211 465 244 486 1.10e-14 76.3
Msa0624210 MtrunA17_Chr5g0409051 26.374 182 127 4 263 438 299 479 1.16e-14 76.3
Msa0624210 MtrunA17_Chr5g0430091 21.951 328 226 11 155 465 183 497 1.18e-14 76.3
Msa0624210 MtrunA17_Chr1g0210091 29.101 189 126 4 253 434 315 502 1.48e-14 75.9
Msa0624210 MtrunA17_Chr7g0218601 24.631 203 145 4 236 438 273 467 1.50e-14 75.9
Msa0624210 MtrunA17_Chr4g0046681 29.651 172 116 5 267 434 26 196 1.57e-14 73.2
Msa0624210 MtrunA17_Chr4g0046631 23.833 407 265 16 58 434 93 484 1.76e-14 75.5
Msa0624210 MtrunA17_Chr3g0104351 23.039 408 257 12 91 462 127 513 2.41e-14 75.1
Msa0624210 MtrunA17_Chr8g0369791 22.434 419 276 14 56 462 81 462 3.10e-14 74.7
Msa0624210 MtrunA17_Chr3g0086691 23.601 411 272 17 58 438 76 474 3.30e-14 74.7
Msa0624210 MtrunA17_Chr7g0246131 26.275 255 178 6 193 443 229 477 3.33e-14 74.7
Msa0624210 MtrunA17_Chr2g0293411 25.556 180 124 3 263 437 286 460 5.72e-14 73.9
Msa0624210 MtrunA17_Chr2g0307311 44.444 72 39 1 37 108 52 122 6.75e-14 68.6
Msa0624210 MtrunA17_Chr3g0101831 22.695 423 300 10 35 440 60 472 1.16e-13 73.2
Msa0624210 MtrunA17_Chr6g0451691 26.122 245 157 7 203 434 260 493 1.17e-13 73.2
Msa0624210 MtrunA17_Chr4g0011941 25.749 167 121 3 274 438 3 168 1.24e-13 69.7
Msa0624210 MtrunA17_Chr4g0011871 24.790 238 166 4 203 438 239 465 1.52e-13 72.8
Msa0624210 MtrunA17_Chr4g0011901 23.630 292 202 9 160 438 181 464 2.20e-13 72.0
Msa0624210 MtrunA17_Chr5g0406651 23.202 431 284 13 36 438 54 465 2.35e-13 72.0
Msa0624210 MtrunA17_Chr3g0101591 26.842 190 119 4 275 445 42 230 2.43e-13 69.7
Msa0624210 MtrunA17_Chr2g0304871 23.239 426 283 19 58 452 86 498 3.83e-13 71.6
Msa0624210 MtrunA17_Chr6g0451641 26.582 237 163 7 203 434 252 482 4.11e-13 71.2
Msa0624210 MtrunA17_Chr6g0451811 28.659 164 112 4 275 434 8 170 4.24e-13 68.6
Msa0624210 MtrunA17_Chr6g0451741 25.820 244 158 7 203 434 279 511 4.33e-13 71.2
Msa0624210 MtrunA17_Chr4g0056951 26.829 205 139 6 215 415 259 456 5.57e-13 70.9
Msa0624210 MtrunA17_Chr8g0382901 22.926 458 301 15 11 438 8 443 1.01e-12 70.5
Msa0624210 MtrunA17_Chr3g0141801 24.806 258 176 7 210 462 237 481 1.12e-12 70.1
Msa0624210 MtrunA17_Chr5g0408181 23.389 419 272 14 56 462 79 460 1.71e-12 69.3
Msa0624210 MtrunA17_Chr2g0280261 24.709 429 287 13 36 445 58 469 1.75e-12 69.3
Msa0624210 MtrunA17_Chr1g0153371 21.851 389 270 13 58 438 81 443 2.27e-12 68.9
Msa0624210 MtrunA17_Chr2g0314781 27.624 181 120 5 288 465 1 173 2.66e-12 65.1
Msa0624210 MtrunA17_Chr4g0046661 31.148 183 120 6 259 436 11 192 3.85e-12 65.9
Msa0624210 MtrunA17_Chr4g0057001 24.514 257 183 6 196 445 239 491 4.37e-12 68.2
Msa0624210 MtrunA17_Chr1g0163401 22.248 436 260 15 81 464 103 511 7.62e-12 67.4
Msa0624210 MtrunA17_Chr5g0430041 27.419 124 89 1 319 441 23 146 8.81e-12 63.9
Msa0624210 MtrunA17_Chr5g0430151 26.613 124 90 1 319 441 23 146 1.59e-11 63.2
Msa0624210 MtrunA17_Chr2g0296651 21.883 393 255 14 81 445 100 468 2.07e-11 65.9
Msa0624210 MtrunA17_Chr5g0445371 23.967 242 146 6 205 445 1 205 2.81e-11 63.5
Msa0624210 MtrunA17_Chr7g0246181 26.016 246 169 6 198 439 235 471 2.99e-11 65.5
Msa0624210 MtrunA17_Chr1g0156081 21.364 440 295 15 53 457 97 520 3.69e-11 65.1
Msa0624210 MtrunA17_Chr4g0011921 24.051 316 209 11 141 438 162 464 3.69e-11 65.1
Msa0624210 MtrunA17_Chr3g0101541 28.906 128 89 2 319 445 1 127 4.01e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0624210 AT3G14680.1 52.778 432 193 3 39 465 87 512 1.15e-169 487
Msa0624210 AT3G14690.1 46.365 509 212 4 12 465 10 512 5.44e-168 483
Msa0624210 AT3G14690.2 46.365 509 212 4 12 465 45 547 1.95e-167 483
Msa0624210 AT3G14660.1 51.620 432 198 3 39 465 87 512 1.77e-165 477
Msa0624210 AT3G14610.1 52.656 433 193 4 39 465 86 512 9.98e-165 475
Msa0624210 AT3G14640.1 51.382 434 198 4 39 465 87 514 5.59e-164 473
Msa0624210 AT3G14640.2 51.382 434 198 4 39 465 109 536 1.70e-163 473
Msa0624210 AT3G14630.1 52.778 432 191 4 40 465 84 508 1.51e-162 469
Msa0624210 AT3G14630.2 52.778 432 191 4 40 465 139 563 2.85e-162 470
Msa0624210 AT3G14650.1 50.926 432 201 3 39 465 87 512 5.67e-161 465
Msa0624210 AT3G14620.1 49.652 431 201 5 37 460 89 510 1.38e-152 444
Msa0624210 AT3G14660.2 50.986 355 163 3 116 465 18 366 3.03e-130 382
Msa0624210 AT2G26710.1 40.416 433 233 7 45 465 96 515 3.66e-111 338
Msa0624210 AT2G46960.2 36.961 441 256 9 38 465 86 517 1.05e-95 298
Msa0624210 AT3G14660.3 47.782 293 142 3 39 326 87 373 3.08e-94 290
Msa0624210 AT2G46960.1 37.592 407 233 8 71 465 4 401 3.01e-91 283
Msa0624210 AT1G75130.1 36.047 430 256 6 42 465 87 503 1.51e-88 279
Msa0624210 AT2G46950.1 36.744 430 250 10 45 463 150 568 2.03e-88 281
Msa0624210 AT4G27710.1 36.092 435 252 7 45 465 95 517 2.49e-88 279
Msa0624210 AT5G24910.1 35.991 439 256 8 42 462 98 529 2.75e-87 277
Msa0624210 AT5G52400.1 34.803 431 258 7 45 465 102 519 4.47e-82 263
Msa0624210 AT5G24900.2 35.714 392 232 7 84 462 23 407 2.57e-81 258
Msa0624210 AT5G24900.1 34.515 423 246 9 60 462 113 524 5.74e-80 258
Msa0624210 AT5G38450.1 34.266 429 268 7 45 465 94 516 6.81e-77 249
Msa0624210 AT1G67110.1 33.100 429 266 6 45 465 95 510 1.38e-72 238
Msa0624210 AT1G17060.1 30.483 269 133 3 22 236 22 290 1.38e-40 148
Msa0624210 AT2G46950.2 33.562 292 172 10 45 325 150 430 1.56e-39 148
Msa0624210 AT4G27710.2 32.302 291 166 8 45 320 95 369 3.60e-37 140
Msa0624210 AT3G53130.1 25.532 423 293 11 58 464 122 538 4.89e-36 140
Msa0624210 AT5G24910.2 29.841 315 196 8 42 338 98 405 3.10e-35 135
Msa0624210 AT4G15110.1 26.161 409 224 12 91 438 159 550 6.60e-33 131
Msa0624210 AT1G31800.1 25.253 396 276 9 58 439 153 542 2.78e-29 121
Msa0624210 AT3G48310.1 23.409 440 304 14 27 449 45 468 1.03e-28 119
Msa0624210 AT2G45510.1 24.249 433 282 15 39 439 63 481 1.53e-27 115
Msa0624210 AT2G44890.1 24.537 432 282 13 39 439 63 481 1.92e-27 115
Msa0624210 AT5G38450.2 29.293 297 199 6 45 333 94 387 2.71e-27 113
Msa0624210 AT3G48290.1 24.208 442 297 14 25 445 44 468 2.66e-26 111
Msa0624210 AT3G48270.1 23.570 437 307 13 27 449 44 467 3.43e-26 111
Msa0624210 AT3G48280.1 24.769 432 292 15 35 449 52 467 6.02e-26 110
Msa0624210 AT3G48300.1 24.356 427 290 15 27 436 42 452 1.30e-25 109
Msa0624210 AT3G48300.2 24.356 427 290 15 27 436 44 454 1.32e-25 109
Msa0624210 AT2G30770.1 24.406 463 302 13 6 445 34 471 8.35e-25 107
Msa0624210 AT4G13310.1 24.895 478 300 17 6 452 33 482 1.21e-24 107
Msa0624210 AT3G26125.1 23.709 426 275 13 75 462 116 529 1.67e-24 106
Msa0624210 AT3G48290.2 24.242 462 298 17 25 445 44 494 2.37e-24 106
Msa0624210 AT1G11680.1 25.215 349 229 10 105 442 135 462 2.39e-24 105
Msa0624210 AT5G24950.1 23.756 442 299 14 27 445 45 471 2.82e-24 105
Msa0624210 AT4G13290.1 24.689 482 288 19 6 452 34 475 5.50e-24 104
Msa0624210 AT1G57750.1 32.308 195 121 4 274 464 308 495 8.11e-24 104
Msa0624210 AT4G39510.1 33.005 203 120 5 272 464 308 504 3.94e-23 102
Msa0624210 AT5G23190.1 22.991 448 296 15 51 462 103 537 4.56e-23 102
Msa0624210 AT2G44890.2 24.065 428 271 13 39 439 63 463 4.70e-23 102
Msa0624210 AT1G67110.2 28.720 289 188 5 45 325 95 373 5.49e-23 100
Msa0624210 AT5G08250.2 22.889 450 297 15 51 464 104 539 8.38e-23 101
Msa0624210 AT5G08250.1 22.667 450 298 14 51 464 42 477 8.80e-23 101
Msa0624210 AT5G04660.1 28.512 242 162 6 199 434 241 477 1.09e-22 101
Msa0624210 AT2G21910.1 23.714 447 295 14 51 464 72 505 2.07e-22 100
Msa0624210 AT5G52320.1 27.239 268 165 6 224 465 239 502 2.95e-22 99.8
Msa0624210 AT3G10560.1 27.572 243 163 6 198 434 243 478 3.69e-22 99.8
Msa0624210 AT2G23180.1 28.028 289 184 9 193 464 230 511 6.46e-22 99.0
Msa0624210 AT1G47620.1 33.000 200 125 4 272 464 317 514 6.69e-22 99.0
Msa0624210 AT1G24540.1 21.992 482 332 16 15 463 48 518 7.96e-22 98.6
Msa0624210 AT4G39500.1 31.633 196 131 3 272 464 270 465 1.15e-21 97.8
Msa0624210 AT2G26170.2 24.892 462 271 18 53 464 2 437 1.34e-21 97.4
Msa0624210 AT1G13710.1 24.648 426 286 15 58 461 96 508 1.41e-21 97.8
Msa0624210 AT2G26170.1 24.892 462 271 18 53 464 85 520 1.42e-21 97.8
Msa0624210 AT4G39500.2 31.633 196 131 3 272 464 320 515 1.74e-21 97.4
Msa0624210 AT4G37340.1 26.420 405 251 16 67 447 87 468 2.13e-21 97.4
Msa0624210 AT5G52320.2 27.481 262 160 6 224 459 239 496 3.83e-21 96.3
Msa0624210 AT5G06900.1 23.023 430 295 15 37 445 58 472 5.89e-21 95.9
Msa0624210 AT4G37400.1 25.653 421 271 16 37 434 55 456 7.41e-21 95.5
Msa0624210 AT1G50560.1 25.223 337 214 9 146 459 184 505 1.18e-20 95.1
Msa0624210 AT4G13770.1 26.154 325 211 8 139 445 161 474 1.53e-20 94.7
Msa0624210 AT3G48320.1 23.864 440 302 15 27 449 45 468 1.56e-20 94.7
Msa0624210 AT5G02900.1 32.500 200 128 5 272 464 279 478 1.85e-20 94.4
Msa0624210 AT3G26830.1 21.333 450 282 12 32 439 47 466 2.31e-20 94.0
Msa0624210 AT3G25180.1 26.437 435 275 17 35 441 63 480 2.54e-20 94.0
Msa0624210 AT1G65340.1 26.154 325 196 10 157 465 207 503 2.75e-20 94.0
Msa0624210 AT3G26310.1 22.749 422 291 14 39 438 56 464 3.38e-20 93.6
Msa0624210 AT3G26270.1 22.093 430 302 14 37 443 56 475 3.65e-20 93.6
Msa0624210 AT5G25120.1 23.294 425 283 15 39 438 55 461 4.87e-20 93.2
Msa0624210 AT1G11610.1 23.502 434 295 13 27 438 46 464 5.51e-20 92.8
Msa0624210 AT1G13140.1 22.673 419 278 13 76 462 117 521 5.82e-20 93.2
Msa0624210 AT1G11610.2 23.502 434 295 13 27 438 46 464 6.10e-20 92.8
Msa0624210 AT3G26210.1 23.239 426 291 15 35 437 53 465 6.90e-20 92.8
Msa0624210 AT4G31500.1 25.284 352 230 12 111 443 134 471 7.04e-20 92.8
Msa0624210 AT3G26300.1 23.094 446 287 16 29 445 54 472 8.03e-20 92.4
Msa0624210 AT4G32170.1 31.683 202 124 5 272 464 306 502 1.24e-19 92.0
Msa0624210 AT4G15360.1 23.922 255 184 5 190 441 232 479 1.79e-19 91.7
Msa0624210 AT1G34540.1 23.094 459 305 18 37 464 55 496 2.05e-19 91.3
Msa0624210 AT4G36220.1 24.471 331 231 5 126 438 154 483 2.61e-19 90.9
Msa0624210 AT5G09970.1 24.331 411 266 15 53 436 112 504 2.67e-19 90.9
Msa0624210 AT4G39480.1 27.801 241 155 5 240 464 275 512 2.87e-19 90.9
Msa0624210 AT1G13140.2 22.829 403 271 12 76 462 117 495 3.94e-19 90.5
Msa0624210 AT3G20950.1 27.413 259 167 8 192 441 240 486 4.34e-19 90.5
Msa0624210 AT3G26230.1 23.744 438 292 15 35 443 48 472 4.84e-19 90.1
Msa0624210 AT5G36220.1 24.932 365 237 14 97 445 129 472 5.68e-19 89.7
Msa0624210 AT3G20935.1 24.710 259 174 5 203 441 51 308 6.35e-19 88.2
Msa0624210 AT4G19230.1 24.163 418 272 13 56 464 80 461 6.49e-19 89.4
Msa0624210 AT3G10570.1 26.271 236 164 5 204 434 248 478 6.53e-19 89.7
Msa0624210 AT5G07990.1 27.572 243 163 7 204 440 237 472 7.75e-19 89.4
Msa0624210 AT3G26280.2 23.557 433 283 16 35 437 71 485 1.18e-18 89.0
Msa0624210 AT4G39490.1 22.940 449 291 15 58 464 80 515 1.19e-18 89.0
Msa0624210 AT3G26280.1 23.557 433 283 16 35 437 54 468 1.21e-18 89.0
Msa0624210 AT1G11600.1 26.246 301 200 10 164 447 194 489 1.37e-18 88.6
Msa0624210 AT1G13150.1 22.782 417 280 13 76 462 110 514 1.43e-18 88.6
Msa0624210 AT2G14100.1 27.160 243 164 6 203 441 248 481 1.52e-18 88.6
Msa0624210 AT4G15330.2 25.417 240 162 5 208 441 220 448 1.77e-18 88.2
Msa0624210 AT3G26320.1 21.963 428 295 13 35 438 53 465 1.88e-18 88.2
Msa0624210 AT4G15330.1 25.417 240 162 5 208 441 248 476 2.15e-18 88.2
Msa0624210 AT5G04630.1 28.205 234 157 7 207 434 246 474 2.24e-18 88.2
Msa0624210 AT4G19230.2 24.227 388 256 11 55 436 79 434 2.47e-18 87.8
Msa0624210 AT1G50520.1 25.321 312 208 9 146 441 183 485 2.54e-18 88.2
Msa0624210 AT4G12320.1 27.586 261 172 8 206 463 254 500 2.96e-18 87.8
Msa0624210 AT5G47990.1 24.262 305 206 9 146 434 180 475 5.85e-18 86.7
Msa0624210 AT5G25140.1 23.529 442 286 17 27 438 42 461 6.20e-18 86.7
Msa0624210 AT2G30750.1 26.645 304 199 7 155 445 179 471 6.87e-18 86.7
Msa0624210 AT3G20130.2 29.050 179 114 4 272 441 280 454 8.53e-18 86.3
Msa0624210 AT5G63450.1 22.573 443 282 14 58 464 84 501 8.59e-18 86.3
Msa0624210 AT2G25160.1 27.239 268 177 9 186 445 231 488 1.02e-17 86.3
Msa0624210 AT4G12310.1 27.203 261 173 8 206 463 256 502 1.12e-17 85.9
Msa0624210 AT5G63450.2 22.573 443 282 14 58 464 142 559 1.21e-17 85.9
Msa0624210 AT3G20130.1 29.050 179 114 4 272 441 308 482 1.25e-17 85.9
Msa0624210 AT5G36220.2 26.032 315 198 12 146 445 32 326 1.42e-17 84.3
Msa0624210 AT1G13090.2 21.396 444 311 12 32 451 47 476 1.48e-17 85.5
Msa0624210 AT3G20940.1 25.681 257 175 7 192 441 236 483 1.63e-17 85.5
Msa0624210 AT3G20140.1 23.358 274 191 7 180 441 212 478 1.67e-17 85.5
Msa0624210 AT3G20120.2 22.291 323 223 9 155 459 52 364 2.41e-17 84.0
Msa0624210 AT3G20120.3 22.291 323 223 9 155 459 52 364 2.41e-17 84.0
Msa0624210 AT3G20120.1 22.291 323 223 9 155 459 52 364 2.41e-17 84.0
Msa0624210 AT2G27010.1 20.650 431 309 10 24 441 48 458 2.45e-17 84.7
Msa0624210 AT5G10600.1 22.819 447 264 15 34 437 68 476 2.81e-17 84.7
Msa0624210 AT5G35715.1 21.818 385 280 12 53 420 6 386 2.85e-17 84.3
Msa0624210 AT1G64930.1 28.272 191 130 4 263 447 299 488 2.90e-17 84.7
Msa0624210 AT1G63710.1 22.273 440 294 12 58 464 82 506 3.59e-17 84.3
Msa0624210 AT3G44250.1 20.095 423 312 12 35 438 50 465 5.01e-17 84.0
Msa0624210 AT5G10610.1 27.500 240 153 8 206 437 234 460 5.85e-17 83.6
Msa0624210 AT3G20120.4 22.291 323 223 9 155 459 188 500 6.73e-17 83.6
Msa0624210 AT1G13100.1 21.190 420 292 15 53 445 65 472 7.90e-17 83.2
Msa0624210 AT2G46660.1 24.020 408 263 17 53 436 113 497 8.63e-17 83.2
Msa0624210 AT1G13080.2 21.656 314 213 8 146 438 50 351 9.75e-17 82.4
Msa0624210 AT4G37430.1 22.683 410 267 15 58 437 73 462 9.85e-17 82.8
Msa0624210 AT4G12300.1 25.758 264 181 7 203 463 247 498 1.06e-16 82.8
Msa0624210 AT1G64940.1 27.039 233 157 7 224 452 270 493 1.76e-16 82.4
Msa0624210 AT4G15380.1 23.111 450 301 13 38 460 68 499 1.80e-16 82.4
Msa0624210 AT1G13080.1 21.656 314 213 8 146 438 168 469 2.07e-16 82.0
Msa0624210 AT4G00360.1 24.385 447 280 19 58 464 82 510 2.35e-16 82.0
Msa0624210 AT2G27690.1 23.659 410 255 14 58 434 76 460 2.97e-16 81.6
Msa0624210 AT3G26200.1 22.333 403 282 14 35 415 50 443 3.68e-16 81.3
Msa0624210 AT5G24960.1 24.276 449 288 16 27 445 46 472 4.13e-16 80.9
Msa0624210 AT5G04330.1 25.391 256 174 6 193 438 224 472 4.23e-16 80.9
Msa0624210 AT2G45970.1 21.924 447 290 14 58 464 82 509 4.42e-16 81.3
Msa0624210 AT2G45550.1 25.912 274 182 9 192 453 231 495 5.09e-16 80.9
Msa0624210 AT4G15350.1 21.867 375 262 11 88 441 112 476 6.99e-16 80.5
Msa0624210 AT1G28430.1 24.291 247 168 5 203 441 245 480 8.39e-16 80.1
Msa0624210 AT5G25180.1 22.350 434 301 14 27 438 42 461 8.65e-16 80.1
Msa0624210 AT5G42580.1 23.323 313 221 7 155 459 186 487 9.54e-16 80.1
Msa0624210 AT4G37310.1 22.967 418 280 15 58 447 77 480 1.01e-15 79.7
Msa0624210 AT2G45570.1 24.825 286 190 10 192 461 231 507 1.41e-15 79.3
Msa0624210 AT2G40890.1 27.111 225 149 4 224 434 236 459 1.48e-15 79.3
Msa0624210 AT3G20100.1 24.898 245 170 5 203 441 246 482 1.56e-15 79.3
Msa0624210 AT3G26190.1 21.780 427 299 15 39 442 54 468 1.66e-15 79.3
Msa0624210 AT4G37370.1 23.729 354 229 12 97 432 122 452 2.60e-15 78.6
Msa0624210 AT5G25900.1 26.210 248 166 5 193 438 247 479 2.86e-15 78.6
Msa0624210 AT2G42250.1 23.037 382 259 15 77 434 107 477 4.29e-15 77.8
Msa0624210 AT2G27000.1 22.449 441 305 14 24 440 52 479 4.29e-15 77.8
Msa0624210 AT3G20960.1 23.750 320 216 9 131 441 78 378 4.55e-15 77.4
Msa0624210 AT1G33730.1 25.703 249 160 8 201 438 105 339 5.41e-15 76.6
Msa0624210 AT1G33730.2 25.703 249 160 8 201 438 105 339 5.41e-15 76.6
Msa0624210 AT1G74550.1 29.070 172 119 3 275 444 286 456 5.46e-15 77.4
Msa0624210 AT1G01600.1 22.768 448 288 17 58 464 82 512 6.27e-15 77.4
Msa0624210 AT3G20960.2 23.750 320 216 9 131 441 181 481 6.93e-15 77.4
Msa0624210 AT3G61040.1 27.811 169 118 3 272 437 296 463 7.22e-15 77.0
Msa0624210 AT3G26160.1 21.516 409 289 15 35 420 52 451 7.36e-15 77.0
Msa0624210 AT3G03470.1 27.723 202 132 5 246 434 275 475 8.45e-15 77.0
Msa0624210 AT2G24180.1 24.715 263 183 8 197 456 239 489 1.10e-14 76.6
Msa0624210 AT4G20240.1 24.694 409 259 18 6 391 34 416 1.58e-14 75.9
Msa0624210 AT1G13110.1 21.875 416 287 14 45 434 64 467 1.90e-14 75.9
Msa0624210 AT2G45580.2 26.374 182 132 2 258 438 142 322 2.17e-14 74.7
Msa0624210 AT2G12190.1 24.555 281 173 8 207 456 240 512 2.69e-14 75.5
Msa0624210 AT2G45580.1 26.374 182 132 2 258 438 296 476 3.15e-14 75.1
Msa0624210 AT1G64950.1 26.336 262 168 8 207 452 240 492 3.35e-14 75.1
Msa0624210 AT4G37330.1 22.977 383 244 16 78 437 101 455 4.41e-14 74.7
Msa0624210 AT4G37410.1 22.931 423 280 18 37 434 55 456 5.29e-14 74.3
Msa0624210 AT1G33720.4 25.620 242 162 7 201 438 116 343 5.80e-14 73.6
Msa0624210 AT1G33720.3 25.620 242 162 7 201 438 116 343 5.80e-14 73.6
Msa0624210 AT1G33720.5 25.620 242 162 7 201 438 116 343 5.80e-14 73.6
Msa0624210 AT4G37360.1 30.688 189 120 6 263 447 287 468 6.13e-14 74.3
Msa0624210 AT1G33720.1 25.620 242 162 7 201 438 248 475 6.25e-14 74.3
Msa0624210 AT3G26150.1 21.395 430 302 17 35 440 52 469 9.45e-14 73.6
Msa0624210 AT4G12330.1 26.050 238 160 7 203 437 254 478 1.16e-13 73.6
Msa0624210 AT1G33720.2 25.000 256 171 7 201 438 116 368 1.58e-13 72.4
Msa0624210 AT5G06905.1 26.122 245 157 7 214 441 245 482 3.56e-13 72.0
Msa0624210 AT5G42590.1 24.150 294 204 7 152 434 175 460 3.90e-13 71.6
Msa0624210 AT5G25130.1 21.319 455 315 16 27 457 42 477 5.50e-13 71.2
Msa0624210 AT1G74540.1 25.962 208 143 4 239 436 248 454 6.52e-13 71.2
Msa0624210 AT3G50660.1 26.000 250 153 6 231 465 280 512 8.27e-13 70.9
Msa0624210 AT1G16410.1 22.750 400 262 15 93 456 133 521 1.26e-12 70.5
Msa0624210 AT3G53300.1 20.465 430 303 15 37 440 52 468 2.20e-12 69.3
Msa0624210 AT2G23220.1 25.379 264 171 8 193 450 247 490 3.97e-12 68.6
Msa0624210 AT2G29090.2 22.673 419 280 13 56 462 93 479 7.59e-12 67.8
Msa0624210 AT2G29090.1 22.673 419 280 13 56 462 93 479 7.59e-12 67.8
Msa0624210 AT4G13310.2 24.093 386 237 16 6 363 33 390 8.17e-12 67.4
Msa0624210 AT3G19270.1 21.717 396 268 11 56 440 78 442 2.55e-11 65.9
Msa0624210 AT3G19270.2 21.554 399 271 11 56 443 78 445 2.82e-11 65.9
Msa0624210 AT3G26180.2 21.608 199 152 3 249 444 144 341 4.60e-11 64.7
Msa0624210 AT1G55940.1 25.592 211 143 5 231 434 260 463 6.94e-11 64.7

Find 145 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCATCATGATTTGGATTT+TGG 0.086543 4_3:-2194301 None:intergenic
TAATTGCTACTATTCCTTTA+TGG 0.112978 4_3:+2192285 Msa0624210:CDS
TGGCCAAAACTTTGCCTTAT+TGG 0.137774 4_3:+2195081 Msa0624210:CDS
ATTCCTCCAGAGAACCTTTC+TGG 0.180535 4_3:-2194995 None:intergenic
CTTGCACGTTCTTGCCATTC+AGG 0.181436 4_3:-2194251 None:intergenic
AAGTGCTTCAATCTTGTTTC+GGG 0.220616 4_3:-2195608 None:intergenic
AACACTTGTTTGATTTGTTC+CGG 0.238223 4_3:-2193386 None:intergenic
AATTGCTACTATTCCTTTAT+GGG 0.243184 4_3:+2192286 Msa0624210:CDS
AAACAAGATTGAAGCACTTT+TGG 0.249940 4_3:+2195612 Msa0624210:three_prime_UTR
TGCATCTGATACCAGCTTAT+TGG 0.260225 4_3:-2195555 None:intergenic
CCACTGCATCTTTGTTAGTT+TGG 0.268150 4_3:+2194204 Msa0624210:CDS
TACTACTTTGGCTTCCAATA+AGG 0.270487 4_3:-2195095 None:intergenic
TAAGTGTTTGTGATAATTTC+TGG 0.276293 4_3:+2195398 Msa0624210:three_prime_UTR
GCCATCAATGATGATTTATT+AGG 0.288793 4_3:+2194062 Msa0624210:CDS
CGGATCTTAGCCCCGTGTTT+TGG 0.297729 4_3:-2195199 None:intergenic
CTAGCAGAGAGCATCTTTCT+AGG 0.300146 4_3:-2195777 None:intergenic
CACTTTCACCAGCTACCTTC+TGG 0.302879 4_3:+2192249 Msa0624210:CDS
GCCCTTCCCCTAGGGTTTCC+TGG 0.304738 4_3:+2195806 Msa0624210:three_prime_UTR
AGTTTGGACAATGGTGTTAT+TGG 0.316922 4_3:+2194220 Msa0624210:CDS
TTCACCATGACTGTGATATA+TGG 0.320687 4_3:+2194948 Msa0624210:CDS
TGACTTAACCCATCATGATT+TGG 0.331413 4_3:-2194308 None:intergenic
TGTTGCCATACCGATACTTT+TGG 0.340038 4_3:+2194925 Msa0624210:CDS
TTTCATGACCTTGAATTTCA+AGG 0.352446 4_3:-2194106 None:intergenic
GAGGGAAAGGGATTGGCATT+TGG 0.353703 4_3:+2195329 Msa0624210:three_prime_UTR
ACCACAAGGAATTCAGCTTC+TGG 0.357033 4_3:-2192313 None:intergenic
GCCTAATAAATCATCATTGA+TGG 0.373911 4_3:-2194063 None:intergenic
ATTTGATCTTATAAGATTGC+AGG 0.376123 4_3:+2193808 Msa0624210:CDS
ACACTTGTTTGATTTGTTCC+GGG 0.394862 4_3:-2193385 None:intergenic
GGGTCCATGATGATCACTTT+TGG 0.395601 4_3:-2193365 None:intergenic
AAAGTGCTTCAATCTTGTTT+CGG 0.396476 4_3:-2195609 None:intergenic
CGTTGGATTAGTAAGTTATG+AGG 0.413311 4_3:+2193466 Msa0624210:CDS
TGATCAGCTGTTAGTTGCTC+TGG 0.414249 4_3:+2195830 Msa0624210:three_prime_UTR
TTAGTTGGTATTATTTAGTA+AGG 0.416431 4_3:+2195519 Msa0624210:three_prime_UTR
TCCATTTGCTAATCATATCA+TGG 0.418520 4_3:-2193664 None:intergenic
GGACAATGGTGTTATTGGCT+AGG 0.425719 4_3:+2194225 Msa0624210:CDS
AAGGGAATTGAACTTTGGTT+TGG 0.426217 4_3:-2193429 None:intergenic
TGTAAGCAATTCTACATTGC+AGG 0.427094 4_3:+2194173 Msa0624210:CDS
TAGGGTTTCGCCCTTCCCCT+AGG 0.429665 4_3:+2195797 Msa0624210:three_prime_UTR
GCGATTTCTAGAACAGCATT+TGG 0.431431 4_3:+2193758 Msa0624210:CDS
TTTAAACCAGAAAGGTTCTC+TGG 0.435887 4_3:+2194989 Msa0624210:CDS
GAGATTTATGATTTAGTCGA+GGG 0.436844 4_3:+2193999 Msa0624210:CDS
ATACACGAAGTCCGATGAAA+TGG 0.438094 4_3:+2193846 Msa0624210:CDS
CCTTTCATTCAAAACTTGAC+TGG 0.439251 4_3:+2193731 Msa0624210:CDS
TACCTACAAGTTCCAACAAA+AGG 0.441178 4_3:+2193958 Msa0624210:CDS
AGCTTCTGGAAAGCCCATAA+AGG 0.443503 4_3:-2192299 None:intergenic
CTTCCAATAAGGCAAAGTTT+TGG 0.453837 4_3:-2195084 None:intergenic
AATTTATCAATGTGAAATGC+AGG 0.455594 4_3:-2193524 None:intergenic
GATGGCTTCTCCATTGTCCA+TGG 0.458759 4_3:-2194045 None:intergenic
TATACAAAGTAAGATGGAAA+AGG 0.465890 4_3:-2195432 None:intergenic
TTAGCAAGGGAATTGAACTT+TGG 0.465912 4_3:-2193434 None:intergenic
GTTCTAGGACCCCATCCAAA+TGG 0.468767 4_3:-2195052 None:intergenic
TCACCATGACTGTGATATAT+GGG 0.470077 4_3:+2194949 Msa0624210:CDS
TCAAATAACCTTGAAATTCA+AGG 0.470347 4_3:+2194098 Msa0624210:CDS
TAGTATTGCATGTGTATGTT+AGG 0.476192 4_3:+2195285 Msa0624210:three_prime_UTR
AAGTAGTGACATTACTACTT+TGG 0.476599 4_3:-2195107 None:intergenic
AATGATATGATGTACAAATC+CGG 0.478746 4_3:-2195717 None:intergenic
GAAGACATCAAACAATTGTA+TGG 0.482962 4_3:-2195658 None:intergenic
TAGCAGAGAGCATCTTTCTA+GGG 0.484708 4_3:-2195776 None:intergenic
CAAAAGAGTTTAAACCAGAA+AGG 0.488467 4_3:+2194981 Msa0624210:CDS
AACCAAAATCCAAATCATGA+TGG 0.488741 4_3:+2194299 Msa0624210:CDS
CAAAGACATCCATACAGAAA+AGG 0.491499 4_3:-2195750 None:intergenic
TTTGGCAGCAGCTATGTAGC+AGG 0.491976 4_3:+2193776 Msa0624210:CDS
TTGATTAGTACTTGGTTGGT+TGG 0.492966 4_3:+2195352 Msa0624210:three_prime_UTR
CTAGAAAGATGCTCTCTGCT+AGG 0.493439 4_3:+2195778 Msa0624210:three_prime_UTR
GCCAGGAAACCCTAGGGGAA+GGG 0.493682 4_3:-2195807 None:intergenic
ATAGAATATACAAAGTAAGA+TGG 0.494392 4_3:-2195438 None:intergenic
AACAAGAGAGGGAAAGGGAT+TGG 0.495412 4_3:+2195322 Msa0624210:three_prime_UTR
TATTGGCTAGGTTTCCTGAA+TGG 0.499274 4_3:+2194237 Msa0624210:CDS
TTCTAGGACCCCATCCAAAT+GGG 0.504793 4_3:-2195051 None:intergenic
GGAATTGCAAAGGCCACAAA+AGG 0.506652 4_3:+2195013 Msa0624210:CDS
GTAAGAATCCAGAAGGTAGC+TGG 0.508985 4_3:-2192257 None:intergenic
CTTTCTTTGCAGCCAAAACA+CGG 0.514214 4_3:+2195187 Msa0624210:CDS
GCCATGATATGATTAGCAAA+TGG 0.516109 4_3:+2193663 Msa0624210:CDS
TGGCTGCTTTGAATAAATGC+TGG 0.516482 4_3:-2193644 None:intergenic
TGATTTATTAGGCTTACTGA+TGG 0.517189 4_3:+2194073 Msa0624210:CDS
ATGGCAACATTTATTCCTGC+AGG 0.519108 4_3:-2194911 None:intergenic
CTGTTGGTGGATATAATCTC+AGG 0.519172 4_3:-2194835 None:intergenic
AGGGTTTCGCCCTTCCCCTA+GGG 0.522263 4_3:+2195798 Msa0624210:three_prime_UTR
TTGGTTGGTTGGTCAAGACT+AGG 0.523367 4_3:+2195363 Msa0624210:three_prime_UTR
TAGAAAGATGCTCTCTGCTA+GGG 0.526241 4_3:+2195779 Msa0624210:three_prime_UTR
AAGTTATGAGGGTGACGAAT+GGG 0.526252 4_3:+2193478 Msa0624210:CDS
TCTCAGAGAGTTAAGTTACA+AGG 0.526310 4_3:-2195468 None:intergenic
GCATTTGGTTGATTAGTACT+TGG 0.526595 4_3:+2195344 Msa0624210:three_prime_UTR
CTGATCAGCCAGGAAACCCT+AGG 0.528111 4_3:-2195814 None:intergenic
TTTCTTTGCAGCCAAAACAC+GGG 0.530148 4_3:+2195188 Msa0624210:CDS
GTTGGATTAGTAAGTTATGA+GGG 0.532684 4_3:+2193467 Msa0624210:CDS
TTTGATCTTATAAGATTGCA+GGG 0.533158 4_3:+2193809 Msa0624210:CDS
ATTTATCAATGTGAAATGCA+GGG 0.533762 4_3:-2193523 None:intergenic
TCTTTGTCTTACCATTTCAT+CGG 0.535987 4_3:-2193857 None:intergenic
CATGAAAAGAGTAAGACAGC+TGG 0.540594 4_3:+2194122 Msa0624210:CDS
GAATAAAACAAGAGAGGGAA+AGG 0.541132 4_3:+2195316 Msa0624210:three_prime_UTR
AGAGATTTATGATTTAGTCG+AGG 0.542148 4_3:+2193998 Msa0624210:CDS
ACCAAAATCCAAATCATGAT+GGG 0.542219 4_3:+2194300 Msa0624210:CDS
TCCAGAAGCTGAATTCCTTG+TGG 0.542304 4_3:+2192312 Msa0624210:CDS
CGAACTAAGAAAACTGTTGG+TGG 0.543941 4_3:-2194848 None:intergenic
TTGGTTGATTAGTACTTGGT+TGG 0.545897 4_3:+2195348 Msa0624210:three_prime_UTR
CAACTAACAGCTGATCAGCC+AGG 0.548592 4_3:-2195824 None:intergenic
GCAAATGCCAACCAATAAGC+TGG 0.551839 4_3:+2195544 Msa0624210:three_prime_UTR
ATGATGTTAACTGTATGAAT+AGG 0.553956 4_3:+2195635 Msa0624210:three_prime_UTR
AGCCAGGAAACCCTAGGGGA+AGG 0.556455 4_3:-2195808 None:intergenic
CGAGAGAAAGCCATGGACAA+TGG 0.556873 4_3:+2194035 Msa0624210:CDS
GGCTGCTTTGAATAAATGCT+GGG 0.563492 4_3:-2193643 None:intergenic
TTATTCCTGCAGGTAGCGAT+AGG 0.563876 4_3:-2194901 None:intergenic
TAATTTATTGATAAAACTCA+CGG 0.567068 4_3:-2195499 None:intergenic
ATCTTTGTTAGTTTGGACAA+TGG 0.573101 4_3:+2194211 Msa0624210:CDS
AAGTTCCAACAAAAGGATGA+AGG 0.573312 4_3:+2193965 Msa0624210:CDS
GTGGTTGAGACCAAAGAGGT+TGG 0.578237 4_3:+2192331 Msa0624210:CDS
GTGAACCAAAAGTATCGGTA+TGG 0.578316 4_3:-2194930 None:intergenic
GCTCGAACTAAGAAAACTGT+TGG 0.579739 4_3:-2194851 None:intergenic
AATACCAAAAGTGATCATCA+TGG 0.581471 4_3:+2193361 Msa0624210:CDS
CTGAATGGCAAGAACGTGCA+AGG 0.583115 4_3:+2194252 Msa0624210:CDS
AATCATGCGAGATTGATGTC+CGG 0.585214 4_3:+2193708 Msa0624210:CDS
TCTGATACCAGCTTATTGGT+TGG 0.588070 4_3:-2195551 None:intergenic
TCATGGTGAACCAAAAGTAT+CGG 0.588312 4_3:-2194935 None:intergenic
GGAAACCTATCGCTACCTGC+AGG 0.589083 4_3:+2194896 Msa0624210:CDS
TGATATGATTAGCAAATGGA+AGG 0.592903 4_3:+2193667 Msa0624210:CDS
TGGGGTCCTAGAACATGCAT+TGG 0.593187 4_3:+2195061 Msa0624210:CDS
TAAGTTATGAGGGTGACGAA+TGG 0.597722 4_3:+2193477 Msa0624210:CDS
TGATCAGCCAGGAAACCCTA+GGG 0.600388 4_3:-2195813 None:intergenic
ATCACAGAGATGAGGTGAGG+AGG 0.603195 4_3:-2195882 None:intergenic
AATAAAACAAGAGAGGGAAA+GGG 0.608790 4_3:+2195317 Msa0624210:three_prime_UTR
AAGCCGAATAAAACAAGAGA+GGG 0.612827 4_3:+2195311 Msa0624210:three_prime_UTR
CCTTGTGGTTGAGACCAAAG+AGG 0.614349 4_3:+2192327 Msa0624210:CDS
TGCAAAGAAAGGATAGCAGT+GGG 0.620612 4_3:-2195175 None:intergenic
CACCCCATATATCACAGTCA+TGG 0.625790 4_3:-2194952 None:intergenic
CATGCTTATAGTCTGCAGAA+AGG 0.626291 4_3:-2195150 None:intergenic
CTGCAAAGAAAGGATAGCAG+TGG 0.631280 4_3:-2195176 None:intergenic
AAACCAGAAAGGTTCTCTGG+AGG 0.634600 4_3:+2194992 Msa0624210:CDS
CCAAACTAACAAAGATGCAG+TGG 0.635378 4_3:-2194204 None:intergenic
TTCTTTGCAGCCAAAACACG+GGG 0.635892 4_3:+2195189 Msa0624210:CDS
TTGGCAGCAGCTATGTAGCA+GGG 0.636138 4_3:+2193777 Msa0624210:CDS
AAAAGTGATCATCATGGACC+CGG 0.637690 4_3:+2193367 Msa0624210:CDS
GAAAAGCTTCTAAGAGCACA+AGG 0.638368 4_3:+2192353 Msa0624210:CDS
TATGACTGTAAGAATCCAGA+AGG 0.644150 4_3:-2192264 None:intergenic
CCTCTTTGGTCTCAACCACA+AGG 0.644752 4_3:-2192327 None:intergenic
GTTCTCTGGAGGAATTGCAA+AGG 0.650068 4_3:+2195003 Msa0624210:CDS
AGCAGAGAGCATCTTTCTAG+GGG 0.653283 4_3:-2195775 None:intergenic
TAAAATACGAGAGAAAGCCA+TGG 0.657399 4_3:+2194028 Msa0624210:CDS
CAAGCCGAATAAAACAAGAG+AGG 0.664051 4_3:+2195310 Msa0624210:three_prime_UTR
CAGGACCTCATATAAAACCA+TGG 0.671962 4_3:-2194816 None:intergenic
TTGATCTTATAAGATTGCAG+GGG 0.692148 4_3:+2193810 Msa0624210:CDS
AGGTCACTATCACAGAGATG+AGG 0.693603 4_3:-2195890 None:intergenic
CACCATGACTGTGATATATG+GGG 0.697286 4_3:+2194950 Msa0624210:CDS
ACTATCACAGAGATGAGGTG+AGG 0.698142 4_3:-2195885 None:intergenic
GATCAGCCAGGAAACCCTAG+GGG 0.757604 4_3:-2195812 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAGATTAAAACTAAATTAA+TGG - chr4_3:2192598-2192617 None:intergenic 10.0%
!!! TTAATTTAGTTTTAATCTAA+TGG + chr4_3:2192598-2192617 Msa0624210:intron 10.0%
!!! AAATTAGAATAGATAATTTT+CGG - chr4_3:2192718-2192737 None:intergenic 10.0%
!!! ATCTATTCTAATTTTTTTTA+AGG + chr4_3:2192724-2192743 Msa0624210:intron 10.0%
!!! TTTTTTAACATAAAATATGT+TGG + chr4_3:2194670-2194689 Msa0624210:intron 10.0%
!!! TTTTTAACATAAAATATGTT+GGG + chr4_3:2194671-2194690 Msa0624210:intron 10.0%
!!! GTAAAAAAAAATTTAAAACT+TGG + chr4_3:2194875-2194894 Msa0624210:CDS 10.0%
!! AATTGGAAAAAAAAAATCAA+TGG - chr4_3:2192888-2192907 None:intergenic 15.0%
!! TAAATAATGATGACTAAATT+TGG - chr4_3:2194468-2194487 None:intergenic 15.0%
!!! ATTACCTTTAAGATATATTA+AGG + chr4_3:2194542-2194561 Msa0624210:intron 15.0%
!!! TTTTAACATAAAATATGTTG+GGG + chr4_3:2194672-2194691 Msa0624210:intron 15.0%
!!! TCAAAAGTTGATATATTTAT+AGG + chr4_3:2194729-2194748 Msa0624210:intron 15.0%
!! TATCAAAAAATTGTTACATT+TGG + chr4_3:2195238-2195257 Msa0624210:three_prime_UTR 15.0%
!! TAATTTATTGATAAAACTCA+CGG - chr4_3:2195502-2195521 None:intergenic 15.0%
!!! AGTTTTATCAATAAATTAGT+TGG + chr4_3:2195504-2195523 Msa0624210:three_prime_UTR 15.0%
!! ATAAATATATACCGTATTTC+TGG - chr4_3:2192505-2192524 None:intergenic 20.0%
!! GAAATACGGTATATATTTAT+AGG + chr4_3:2192505-2192524 Msa0624210:intron 20.0%
!! TTAAAACTAAATTAATGGCT+AGG - chr4_3:2192593-2192612 None:intergenic 20.0%
!!! ATAAACAAGGAATTTTTCTT+TGG - chr4_3:2192796-2192815 None:intergenic 20.0%
!! CAAGTGATGTTAATTATTTA+GGG - chr4_3:2193914-2193933 None:intergenic 20.0%
!! TCAAGTGATGTTAATTATTT+AGG - chr4_3:2193915-2193934 None:intergenic 20.0%
!! TAGTCATCATTATTTAACAA+TGG + chr4_3:2194472-2194491 Msa0624210:intron 20.0%
!!! AGTTATAAGAAAGTTTTTGT+TGG + chr4_3:2194700-2194719 Msa0624210:intron 20.0%
!!! GTTATAAGAAAGTTTTTGTT+GGG + chr4_3:2194701-2194720 Msa0624210:intron 20.0%
!! ATAGAATATACAAAGTAAGA+TGG - chr4_3:2195441-2195460 None:intergenic 20.0%
!!! TTAGTTGGTATTATTTAGTA+AGG + chr4_3:2195519-2195538 Msa0624210:three_prime_UTR 20.0%
! TAATTGCTACTATTCCTTTA+TGG + chr4_3:2192285-2192304 Msa0624210:CDS 25.0%
! AATTGCTACTATTCCTTTAT+GGG + chr4_3:2192286-2192305 Msa0624210:CDS 25.0%
! ATTTATAGGCATGTCATATA+TGG + chr4_3:2192519-2192538 Msa0624210:intron 25.0%
! TTTATAGGCATGTCATATAT+GGG + chr4_3:2192520-2192539 Msa0624210:intron 25.0%
!!! TCAAATTTAATTTGACACCT+TGG - chr4_3:2192562-2192581 None:intergenic 25.0%
! TAATTTATTCTTTCTCCTCT+TGG + chr4_3:2192681-2192700 Msa0624210:intron 25.0%
! CTTTGGTTAAAAAAAAGCAA+AGG - chr4_3:2192779-2192798 None:intergenic 25.0%
! AAAAAAAATCAATGGCTTCA+AGG - chr4_3:2192880-2192899 None:intergenic 25.0%
!! GCTTGAAATTTGAACTTTTA+CGG + chr4_3:2192988-2193007 Msa0624210:intron 25.0%
! ATAAACTATGCTGAGTTAAT+TGG + chr4_3:2193045-2193064 Msa0624210:intron 25.0%
!!! TACTTCATATCGATTTGATA+TGG - chr4_3:2193184-2193203 None:intergenic 25.0%
! TTATTAGCAATTGTTCCAAA+AGG - chr4_3:2193298-2193317 None:intergenic 25.0%
! CTAATAATTATGTGATGTGT+AGG + chr4_3:2193311-2193330 Msa0624210:intron 25.0%
! ATTTATCAATGTGAAATGCA+GGG - chr4_3:2193526-2193545 None:intergenic 25.0%
! AATTTATCAATGTGAAATGC+AGG - chr4_3:2193527-2193546 None:intergenic 25.0%
! ACATTGATAAATTGAGAGTA+AGG + chr4_3:2193534-2193553 Msa0624210:intron 25.0%
! GCATATTCTGTAAATAAGTT+AGG - chr4_3:2193622-2193641 None:intergenic 25.0%
! ATTTGATCTTATAAGATTGC+AGG + chr4_3:2193808-2193827 Msa0624210:CDS 25.0%
! TTTGATCTTATAAGATTGCA+GGG + chr4_3:2193809-2193828 Msa0624210:CDS 25.0%
! TTGATATATAACGTGTTTCT+AGG + chr4_3:2193931-2193950 Msa0624210:intron 25.0%
! TCAAATAACCTTGAAATTCA+AGG + chr4_3:2194098-2194117 Msa0624210:CDS 25.0%
! ATGATGACTAAATTTGGTAA+CGG - chr4_3:2194462-2194481 None:intergenic 25.0%
! GAGACCTTAATATATCTTAA+AGG - chr4_3:2194549-2194568 None:intergenic 25.0%
! TATACATGATAAGTACAACA+TGG - chr4_3:2194602-2194621 None:intergenic 25.0%
! GTATAAGTTAGCAACAAAAA+AGG - chr4_3:2194773-2194792 None:intergenic 25.0%
!!! TACCATAACATTTTTTCCAT+AGG + chr4_3:2194790-2194809 Msa0624210:intron 25.0%
! TAAGTGTTTGTGATAATTTC+TGG + chr4_3:2195398-2195417 Msa0624210:three_prime_UTR 25.0%
! TATACAAAGTAAGATGGAAA+AGG - chr4_3:2195435-2195454 None:intergenic 25.0%
! ATGATGTTAACTGTATGAAT+AGG + chr4_3:2195635-2195654 Msa0624210:three_prime_UTR 25.0%
! GAAAAAATGCAATTCAAATC+CGG + chr4_3:2195698-2195717 Msa0624210:three_prime_UTR 25.0%
! AATGATATGATGTACAAATC+CGG - chr4_3:2195720-2195739 None:intergenic 25.0%
CTAAATTAATGGCTAGGATT+TGG - chr4_3:2192587-2192606 None:intergenic 30.0%
GTTATTTGATCAAACATGTG+AGG - chr4_3:2192641-2192660 None:intergenic 30.0%
!!! ATATGTAGACCTTTTTTGCT+GGG - chr4_3:2192819-2192838 None:intergenic 30.0%
!!! AATATGTAGACCTTTTTTGC+TGG - chr4_3:2192820-2192839 None:intergenic 30.0%
TGTATTATATTAGAGAGTCG+TGG - chr4_3:2192855-2192874 None:intergenic 30.0%
ACTTGTGGTTAAATAGGAAT+TGG - chr4_3:2192905-2192924 None:intergenic 30.0%
ATTCCTATTTAACCACAAGT+TGG + chr4_3:2192905-2192924 Msa0624210:intron 30.0%
GTTAATTGGAGTAATGAAAG+AGG + chr4_3:2193059-2193078 Msa0624210:intron 30.0%
!!! TTTATTTTACCAACCATCGT+TGG - chr4_3:2193130-2193149 None:intergenic 30.0%
!! TTCATATCGATTTGATATGG+TGG - chr4_3:2193181-2193200 None:intergenic 30.0%
TTGCTTAGTTGGAATATGTT+TGG + chr4_3:2193249-2193268 Msa0624210:intron 30.0%
TTAGTTGGAATATGTTTGGT+AGG + chr4_3:2193253-2193272 Msa0624210:intron 30.0%
!! TAGGCAAGAGTTCATTTTTA+TGG + chr4_3:2193330-2193349 Msa0624210:intron 30.0%
!! AGGCAAGAGTTCATTTTTAT+GGG + chr4_3:2193331-2193350 Msa0624210:intron 30.0%
!! AAGAGTTCATTTTTATGGGA+AGG + chr4_3:2193335-2193354 Msa0624210:CDS 30.0%
AATACCAAAAGTGATCATCA+TGG + chr4_3:2193361-2193380 Msa0624210:CDS 30.0%
!! AACACTTGTTTGATTTGTTC+CGG - chr4_3:2193389-2193408 None:intergenic 30.0%
AACGAACAAAAACTTAGCAA+GGG - chr4_3:2193450-2193469 None:intergenic 30.0%
!! GTTGGATTAGTAAGTTATGA+GGG + chr4_3:2193467-2193486 Msa0624210:CDS 30.0%
! TCCATTTGCTAATCATATCA+TGG - chr4_3:2193667-2193686 None:intergenic 30.0%
TGATATGATTAGCAAATGGA+AGG + chr4_3:2193667-2193686 Msa0624210:CDS 30.0%
TTGATCTTATAAGATTGCAG+GGG + chr4_3:2193810-2193829 Msa0624210:CDS 30.0%
TCTTTGTCTTACCATTTCAT+CGG - chr4_3:2193860-2193879 None:intergenic 30.0%
AGAGATTTATGATTTAGTCG+AGG + chr4_3:2193998-2194017 Msa0624210:CDS 30.0%
GAGATTTATGATTTAGTCGA+GGG + chr4_3:2193999-2194018 Msa0624210:CDS 30.0%
GCCATCAATGATGATTTATT+AGG + chr4_3:2194062-2194081 Msa0624210:CDS 30.0%
GCCTAATAAATCATCATTGA+TGG - chr4_3:2194066-2194085 None:intergenic 30.0%
TGATTTATTAGGCTTACTGA+TGG + chr4_3:2194073-2194092 Msa0624210:CDS 30.0%
TTTCATGACCTTGAATTTCA+AGG - chr4_3:2194109-2194128 None:intergenic 30.0%
! ATCTTTGTTAGTTTGGACAA+TGG + chr4_3:2194211-2194230 Msa0624210:CDS 30.0%
! CAAGAAGTTTTGCAAGTTTT+TGG + chr4_3:2194275-2194294 Msa0624210:CDS 30.0%
AACCAAAATCCAAATCATGA+TGG + chr4_3:2194299-2194318 Msa0624210:CDS 30.0%
ACCAAAATCCAAATCATGAT+GGG + chr4_3:2194300-2194319 Msa0624210:CDS 30.0%
ATGTCATAAAAAAAGTCACG+TGG - chr4_3:2194516-2194535 None:intergenic 30.0%
!!! ACGTGACTTTTTTTATGACA+TGG + chr4_3:2194515-2194534 Msa0624210:intron 30.0%
ATATATTAAGGTCTCCACAA+TGG + chr4_3:2194554-2194573 Msa0624210:intron 30.0%
AACATAAAATATGTTGGGGA+CGG + chr4_3:2194676-2194695 Msa0624210:intron 30.0%
CACCTATGGAAAAAATGTTA+TGG - chr4_3:2194795-2194814 None:intergenic 30.0%
CAAAAGAGTTTAAACCAGAA+AGG + chr4_3:2194981-2195000 Msa0624210:CDS 30.0%
! AAATGAAACTTGACCTTTTG+TGG - chr4_3:2195029-2195048 None:intergenic 30.0%
!! CAAGTTTCATTTTTCCCATT+TGG + chr4_3:2195037-2195056 Msa0624210:CDS 30.0%
!! TTTCATTTTTCCCATTTGGA+TGG + chr4_3:2195041-2195060 Msa0624210:CDS 30.0%
!! TTCATTTTTCCCATTTGGAT+GGG + chr4_3:2195042-2195061 Msa0624210:CDS 30.0%
AAGTAGTGACATTACTACTT+TGG - chr4_3:2195110-2195129 None:intergenic 30.0%
! GATATTACAGTTTTTGCAGA+CGG - chr4_3:2195222-2195241 None:intergenic 30.0%
TAGTATTGCATGTGTATGTT+AGG + chr4_3:2195285-2195304 Msa0624210:three_prime_UTR 30.0%
!!! TTTCCCTCTCTTGTTTTATT+CGG - chr4_3:2195317-2195336 None:intergenic 30.0%
AATAAAACAAGAGAGGGAAA+GGG + chr4_3:2195317-2195336 Msa0624210:three_prime_UTR 30.0%
! AAAGTGCTTCAATCTTGTTT+CGG - chr4_3:2195612-2195631 None:intergenic 30.0%
!! AAACAAGATTGAAGCACTTT+TGG + chr4_3:2195612-2195631 Msa0624210:three_prime_UTR 30.0%
GAAGACATCAAACAATTGTA+TGG - chr4_3:2195661-2195680 None:intergenic 30.0%
!!! GCATTTTTTCTCAGTTTCAT+AGG - chr4_3:2195688-2195707 None:intergenic 30.0%
TATGACTGTAAGAATCCAGA+AGG - chr4_3:2192267-2192286 None:intergenic 35.0%
! GAGATCAAATGGTTTGGATT+TGG - chr4_3:2192435-2192454 None:intergenic 35.0%
GATAAGATCAAATGACACCA+AGG + chr4_3:2192542-2192561 Msa0624210:intron 35.0%
GTGAGGACTTAATGAATTGA+TGG - chr4_3:2192624-2192643 None:intergenic 35.0%
!!! CTTTTTTGCTGGGATAAACA+AGG - chr4_3:2192809-2192828 None:intergenic 35.0%
CTTGTTTATCCCAGCAAAAA+AGG + chr4_3:2192807-2192826 Msa0624210:intron 35.0%
CTCAGCATAGTTTATCTTTG+TGG - chr4_3:2193040-2193059 None:intergenic 35.0%
AGAGATATAGTATCCAACGA+TGG + chr4_3:2193114-2193133 Msa0624210:intron 35.0%
ATATAGTATCCAACGATGGT+TGG + chr4_3:2193118-2193137 Msa0624210:intron 35.0%
ATGAAGTAACCAACGATGAT+TGG + chr4_3:2193196-2193215 Msa0624210:intron 35.0%
TGAAGTAACCAACGATGATT+GGG + chr4_3:2193197-2193216 Msa0624210:intron 35.0%
!! ACACTTGTTTGATTTGTTCC+GGG - chr4_3:2193388-2193407 None:intergenic 35.0%
AAGGGAATTGAACTTTGGTT+TGG - chr4_3:2193432-2193451 None:intergenic 35.0%
TTAGCAAGGGAATTGAACTT+TGG - chr4_3:2193437-2193456 None:intergenic 35.0%
CAACGAACAAAAACTTAGCA+AGG - chr4_3:2193451-2193470 None:intergenic 35.0%
! CTTGCTAAGTTTTTGTTCGT+TGG + chr4_3:2193449-2193468 Msa0624210:CDS 35.0%
!! CGTTGGATTAGTAAGTTATG+AGG + chr4_3:2193466-2193485 Msa0624210:CDS 35.0%
GCCATGATATGATTAGCAAA+TGG + chr4_3:2193663-2193682 Msa0624210:CDS 35.0%
!!! TCAAGTTTTGAATGAAAGGC+CGG - chr4_3:2193730-2193749 None:intergenic 35.0%
!!! CCAGTCAAGTTTTGAATGAA+AGG - chr4_3:2193734-2193753 None:intergenic 35.0%
CCTTTCATTCAAAACTTGAC+TGG + chr4_3:2193731-2193750 Msa0624210:CDS 35.0%
TACCTACAAGTTCCAACAAA+AGG + chr4_3:2193958-2193977 Msa0624210:CDS 35.0%
! ATCCTTTTGTTGGAACTTGT+AGG - chr4_3:2193963-2193982 None:intergenic 35.0%
AAGTTCCAACAAAAGGATGA+AGG + chr4_3:2193965-2193984 Msa0624210:CDS 35.0%
! GATTTCCTTCATCCTTTTGT+TGG - chr4_3:2193973-2193992 None:intergenic 35.0%
TAAAATACGAGAGAAAGCCA+TGG + chr4_3:2194028-2194047 Msa0624210:CDS 35.0%
TGTAAGCAATTCTACATTGC+AGG + chr4_3:2194173-2194192 Msa0624210:CDS 35.0%
!! AGTTTGGACAATGGTGTTAT+TGG + chr4_3:2194220-2194239 Msa0624210:CDS 35.0%
!! ACCCATCATGATTTGGATTT+TGG - chr4_3:2194304-2194323 None:intergenic 35.0%
TGACTTAACCCATCATGATT+TGG - chr4_3:2194311-2194330 None:intergenic 35.0%
! TTGTTGATATTGTGCCATTG+TGG - chr4_3:2194571-2194590 None:intergenic 35.0%
!!! ATTTTTTCCATAGGTGACCA+TGG + chr4_3:2194799-2194818 Msa0624210:intron 35.0%
TATAAAACCATGGTCACCTA+TGG - chr4_3:2194809-2194828 None:intergenic 35.0%
! TCATGGTGAACCAAAAGTAT+CGG - chr4_3:2194938-2194957 None:intergenic 35.0%
TTCACCATGACTGTGATATA+TGG + chr4_3:2194948-2194967 Msa0624210:CDS 35.0%
TCACCATGACTGTGATATAT+GGG + chr4_3:2194949-2194968 Msa0624210:CDS 35.0%
TTTAAACCAGAAAGGTTCTC+TGG + chr4_3:2194989-2195008 Msa0624210:CDS 35.0%
!! TCATTTTTCCCATTTGGATG+GGG + chr4_3:2195043-2195062 Msa0624210:CDS 35.0%
! CTTCCAATAAGGCAAAGTTT+TGG - chr4_3:2195087-2195106 None:intergenic 35.0%
! TACTACTTTGGCTTCCAATA+AGG - chr4_3:2195098-2195117 None:intergenic 35.0%
AAGCCGAATAAAACAAGAGA+GGG + chr4_3:2195311-2195330 Msa0624210:three_prime_UTR 35.0%
GAATAAAACAAGAGAGGGAA+AGG + chr4_3:2195316-2195335 Msa0624210:three_prime_UTR 35.0%
GCATTTGGTTGATTAGTACT+TGG + chr4_3:2195344-2195363 Msa0624210:three_prime_UTR 35.0%
TTGGTTGATTAGTACTTGGT+TGG + chr4_3:2195348-2195367 Msa0624210:three_prime_UTR 35.0%
TTGATTAGTACTTGGTTGGT+TGG + chr4_3:2195352-2195371 Msa0624210:three_prime_UTR 35.0%
TCTCAGAGAGTTAAGTTACA+AGG - chr4_3:2195471-2195490 None:intergenic 35.0%
! AAGTGCTTCAATCTTGTTTC+GGG - chr4_3:2195611-2195630 None:intergenic 35.0%
! ACAAGTTCTCCTTTTCTGTA+TGG + chr4_3:2195741-2195760 Msa0624210:three_prime_UTR 35.0%
CAAAGACATCCATACAGAAA+AGG - chr4_3:2195753-2195772 None:intergenic 35.0%
! AGAAGCTTTTCCAACCTCTT+TGG - chr4_3:2192344-2192363 None:intergenic 40.0%
! GAAAAGCTTCTAAGAGCACA+AGG + chr4_3:2192353-2192372 Msa0624210:CDS 40.0%
GTTGGAGAGATCAAATGGTT+TGG - chr4_3:2192441-2192460 None:intergenic 40.0%
ACATCGTTGGAGAGATCAAA+TGG - chr4_3:2192446-2192465 None:intergenic 40.0%
TGTACGAATGGAAAGATCTG+TGG - chr4_3:2192473-2192492 None:intergenic 40.0%
CACCAAACTGTCCAGAAATA+CGG + chr4_3:2192491-2192510 Msa0624210:intron 40.0%
!! TACCGTATTTCTGGACAGTT+TGG - chr4_3:2192496-2192515 None:intergenic 40.0%
TCGGAAAGCAATTAACCAAG+AGG - chr4_3:2192699-2192718 None:intergenic 40.0%
CCACCAACTTGTGGTTAAAT+AGG - chr4_3:2192911-2192930 None:intergenic 40.0%
! CCTATTTAACCACAAGTTGG+TGG + chr4_3:2192908-2192927 Msa0624210:intron 40.0%
TTGTTAGACCCAATCATCGT+TGG - chr4_3:2193208-2193227 None:intergenic 40.0%
CGATGATTGGGTCTAACAAA+AGG + chr4_3:2193209-2193228 Msa0624210:intron 40.0%
!!! CCAACTAAGCAACTTTTTCG+AGG - chr4_3:2193241-2193260 None:intergenic 40.0%
CCTCGAAAAAGTTGCTTAGT+TGG + chr4_3:2193238-2193257 Msa0624210:intron 40.0%
CCAAAAGGCTTAGCAACTTA+TGG - chr4_3:2193283-2193302 None:intergenic 40.0%
! CCATAAGTTGCTAAGCCTTT+TGG + chr4_3:2193280-2193299 Msa0624210:intron 40.0%
AAAAGTGATCATCATGGACC+CGG + chr4_3:2193367-2193386 Msa0624210:CDS 40.0%
TAAGTTATGAGGGTGACGAA+TGG + chr4_3:2193477-2193496 Msa0624210:CDS 40.0%
AAGTTATGAGGGTGACGAAT+GGG + chr4_3:2193478-2193497 Msa0624210:CDS 40.0%
! GGCTGCTTTGAATAAATGCT+GGG - chr4_3:2193646-2193665 None:intergenic 40.0%
! TGGCTGCTTTGAATAAATGC+TGG - chr4_3:2193647-2193666 None:intergenic 40.0%
AATCATGCGAGATTGATGTC+CGG + chr4_3:2193708-2193727 Msa0624210:CDS 40.0%
!! GCGATTTCTAGAACAGCATT+TGG + chr4_3:2193758-2193777 Msa0624210:CDS 40.0%
ATACACGAAGTCCGATGAAA+TGG + chr4_3:2193846-2193865 Msa0624210:CDS 40.0%
CATGAAAAGAGTAAGACAGC+TGG + chr4_3:2194122-2194141 Msa0624210:CDS 40.0%
CCAAACTAACAAAGATGCAG+TGG - chr4_3:2194207-2194226 None:intergenic 40.0%
CCACTGCATCTTTGTTAGTT+TGG + chr4_3:2194204-2194223 Msa0624210:CDS 40.0%
! TATTGGCTAGGTTTCCTGAA+TGG + chr4_3:2194237-2194256 Msa0624210:CDS 40.0%
ACGTGAGGATGAAAGTTTGA+TGG - chr4_3:2194434-2194453 None:intergenic 40.0%
!! TTGGTAACGGAAAATACGTG+AGG - chr4_3:2194449-2194468 None:intergenic 40.0%
!!! GGTGACCATGGTTTTATATG+AGG + chr4_3:2194811-2194830 Msa0624210:intron 40.0%
CAGGACCTCATATAAAACCA+TGG - chr4_3:2194819-2194838 None:intergenic 40.0%
! CTGTTGGTGGATATAATCTC+AGG - chr4_3:2194838-2194857 None:intergenic 40.0%
CGAACTAAGAAAACTGTTGG+TGG - chr4_3:2194851-2194870 None:intergenic 40.0%
GCTCGAACTAAGAAAACTGT+TGG - chr4_3:2194854-2194873 None:intergenic 40.0%
ATGGCAACATTTATTCCTGC+AGG - chr4_3:2194914-2194933 None:intergenic 40.0%
! TGTTGCCATACCGATACTTT+TGG + chr4_3:2194925-2194944 Msa0624210:CDS 40.0%
!! GTGAACCAAAAGTATCGGTA+TGG - chr4_3:2194933-2194952 None:intergenic 40.0%
CACCATGACTGTGATATATG+GGG + chr4_3:2194950-2194969 Msa0624210:CDS 40.0%
! TTTTGGCCAATGCATGTTCT+AGG - chr4_3:2195070-2195089 None:intergenic 40.0%
TGGCCAAAACTTTGCCTTAT+TGG + chr4_3:2195081-2195100 Msa0624210:CDS 40.0%
CATGCTTATAGTCTGCAGAA+AGG - chr4_3:2195153-2195172 None:intergenic 40.0%
TGCAAAGAAAGGATAGCAGT+GGG - chr4_3:2195178-2195197 None:intergenic 40.0%
CTTTCTTTGCAGCCAAAACA+CGG + chr4_3:2195187-2195206 Msa0624210:CDS 40.0%
TTTCTTTGCAGCCAAAACAC+GGG + chr4_3:2195188-2195207 Msa0624210:CDS 40.0%
CAAGCCGAATAAAACAAGAG+AGG + chr4_3:2195310-2195329 Msa0624210:three_prime_UTR 40.0%
TCTGATACCAGCTTATTGGT+TGG - chr4_3:2195554-2195573 None:intergenic 40.0%
TGCATCTGATACCAGCTTAT+TGG - chr4_3:2195558-2195577 None:intergenic 40.0%
!! TAGCAGAGAGCATCTTTCTA+GGG - chr4_3:2195779-2195798 None:intergenic 40.0%
TAGAAAGATGCTCTCTGCTA+GGG + chr4_3:2195779-2195798 Msa0624210:three_prime_UTR 40.0%
GTAAGAATCCAGAAGGTAGC+TGG - chr4_3:2192260-2192279 None:intergenic 45.0%
! AGCTTCTGGAAAGCCCATAA+AGG - chr4_3:2192302-2192321 None:intergenic 45.0%
TCCAGAAGCTGAATTCCTTG+TGG + chr4_3:2192312-2192331 Msa0624210:CDS 45.0%
ACCACAAGGAATTCAGCTTC+TGG - chr4_3:2192316-2192335 None:intergenic 45.0%
! CTAAGAGCACAAGGTCTTCA+AGG + chr4_3:2192362-2192381 Msa0624210:intron 45.0%
!! TGGACAGTTTGGTGTACGAA+TGG - chr4_3:2192485-2192504 None:intergenic 45.0%
GAAAGATTGCCACCAACTTG+TGG - chr4_3:2192920-2192939 None:intergenic 45.0%
! GGGTCCATGATGATCACTTT+TGG - chr4_3:2193368-2193387 None:intergenic 45.0%
!! GGACAATGGTGTTATTGGCT+AGG + chr4_3:2194225-2194244 Msa0624210:CDS 45.0%
TTATTCCTGCAGGTAGCGAT+AGG - chr4_3:2194904-2194923 None:intergenic 45.0%
CACCCCATATATCACAGTCA+TGG - chr4_3:2194955-2194974 None:intergenic 45.0%
AAACCAGAAAGGTTCTCTGG+AGG + chr4_3:2194992-2195011 Msa0624210:CDS 45.0%
ATTCCTCCAGAGAACCTTTC+TGG - chr4_3:2194998-2195017 None:intergenic 45.0%
! GTTCTCTGGAGGAATTGCAA+AGG + chr4_3:2195003-2195022 Msa0624210:CDS 45.0%
GGAATTGCAAAGGCCACAAA+AGG + chr4_3:2195013-2195032 Msa0624210:CDS 45.0%
!! TTCTAGGACCCCATCCAAAT+GGG - chr4_3:2195054-2195073 None:intergenic 45.0%
CTGCAAAGAAAGGATAGCAG+TGG - chr4_3:2195179-2195198 None:intergenic 45.0%
!!! CGTGTTTTGGCTGCAAAGAA+AGG - chr4_3:2195189-2195208 None:intergenic 45.0%
TTCTTTGCAGCCAAAACACG+GGG + chr4_3:2195189-2195208 Msa0624210:CDS 45.0%
AACAAGAGAGGGAAAGGGAT+TGG + chr4_3:2195322-2195341 Msa0624210:three_prime_UTR 45.0%
! TTGGTTGGTTGGTCAAGACT+AGG + chr4_3:2195363-2195382 Msa0624210:three_prime_UTR 45.0%
GCAAATGCCAACCAATAAGC+TGG + chr4_3:2195544-2195563 Msa0624210:three_prime_UTR 45.0%
!! AGCAGAGAGCATCTTTCTAG+GGG - chr4_3:2195778-2195797 None:intergenic 45.0%
!! CTAGCAGAGAGCATCTTTCT+AGG - chr4_3:2195780-2195799 None:intergenic 45.0%
CTAGAAAGATGCTCTCTGCT+AGG + chr4_3:2195778-2195797 Msa0624210:three_prime_UTR 45.0%
TGATCAGCTGTTAGTTGCTC+TGG + chr4_3:2195830-2195849 Msa0624210:three_prime_UTR 45.0%
CACTTTCACCAGCTACCTTC+TGG + chr4_3:2192249-2192268 Msa0624210:CDS 50.0%
CCTCTTTGGTCTCAACCACA+AGG - chr4_3:2192330-2192349 None:intergenic 50.0%
CCTTGTGGTTGAGACCAAAG+AGG + chr4_3:2192327-2192346 Msa0624210:CDS 50.0%
GTGGTTGAGACCAAAGAGGT+TGG + chr4_3:2192331-2192350 Msa0624210:CDS 50.0%
TTTGGCAGCAGCTATGTAGC+AGG + chr4_3:2193776-2193795 Msa0624210:CDS 50.0%
TTGGCAGCAGCTATGTAGCA+GGG + chr4_3:2193777-2193796 Msa0624210:CDS 50.0%
CGAGAGAAAGCCATGGACAA+TGG + chr4_3:2194035-2194054 Msa0624210:CDS 50.0%
GATGGCTTCTCCATTGTCCA+TGG - chr4_3:2194048-2194067 None:intergenic 50.0%
CTTGCACGTTCTTGCCATTC+AGG - chr4_3:2194254-2194273 None:intergenic 50.0%
CTGAATGGCAAGAACGTGCA+AGG + chr4_3:2194252-2194271 Msa0624210:CDS 50.0%
!! GTTCTAGGACCCCATCCAAA+TGG - chr4_3:2195055-2195074 None:intergenic 50.0%
TGGGGTCCTAGAACATGCAT+TGG + chr4_3:2195061-2195080 Msa0624210:CDS 50.0%
! GAGGGAAAGGGATTGGCATT+TGG + chr4_3:2195329-2195348 Msa0624210:three_prime_UTR 50.0%
TGATCAGCCAGGAAACCCTA+GGG - chr4_3:2195816-2195835 None:intergenic 50.0%
CAACTAACAGCTGATCAGCC+AGG - chr4_3:2195827-2195846 None:intergenic 50.0%
GAGGAGCTAAAAACCTGAGG+AGG - chr4_3:2195866-2195885 None:intergenic 50.0%
GAGGAGGAGCTAAAAACCTG+AGG - chr4_3:2195869-2195888 None:intergenic 50.0%
ATCACAGAGATGAGGTGAGG+AGG - chr4_3:2195885-2195904 None:intergenic 50.0%
GATCTGTGGCGCAACATCGT+TGG - chr4_3:2192459-2192478 None:intergenic 55.0%
GGAAACCTATCGCTACCTGC+AGG + chr4_3:2194896-2194915 Msa0624210:CDS 55.0%
! CGGATCTTAGCCCCGTGTTT+TGG - chr4_3:2195202-2195221 None:intergenic 55.0%
GATCAGCCAGGAAACCCTAG+GGG - chr4_3:2195815-2195834 None:intergenic 55.0%
CTGATCAGCCAGGAAACCCT+AGG - chr4_3:2195817-2195836 None:intergenic 55.0%
TAGGGTTTCGCCCTTCCCCT+AGG + chr4_3:2195797-2195816 Msa0624210:three_prime_UTR 60.0%
AGGGTTTCGCCCTTCCCCTA+GGG + chr4_3:2195798-2195817 Msa0624210:three_prime_UTR 60.0%
GCCAGGAAACCCTAGGGGAA+GGG - chr4_3:2195810-2195829 None:intergenic 60.0%
AGCCAGGAAACCCTAGGGGA+AGG - chr4_3:2195811-2195830 None:intergenic 60.0%
GCCCTTCCCCTAGGGTTTCC+TGG + chr4_3:2195806-2195825 Msa0624210:three_prime_UTR 65.0%
TGGTACGCTCGCTCCTCCTC+AGG + chr4_3:2195850-2195869 Msa0624210:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 2192242 2195906 2192242 ID=Msa0624210;Name=Msa0624210
chr4_3 mRNA 2192242 2195906 2192242 ID=Msa0624210-mRNA-1;Parent=Msa0624210;Name=Msa0624210-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0.8|0.83|1|0.8|0.66|6|649|465
chr4_3 exon 2192242 2192374 2192242 ID=Msa0624210-mRNA-1:exon:576;Parent=Msa0624210-mRNA-1
chr4_3 exon 2193333 2193550 2193333 ID=Msa0624210-mRNA-1:exon:577;Parent=Msa0624210-mRNA-1
chr4_3 exon 2193635 2193867 2193635 ID=Msa0624210-mRNA-1:exon:578;Parent=Msa0624210-mRNA-1
chr4_3 exon 2193953 2194340 2193953 ID=Msa0624210-mRNA-1:exon:579;Parent=Msa0624210-mRNA-1
chr4_3 exon 2194812 2195859 2194812 ID=Msa0624210-mRNA-1:exon:580;Parent=Msa0624210-mRNA-1
chr4_3 exon 2195880 2195906 2195880 ID=Msa0624210-mRNA-1:exon:581;Parent=Msa0624210-mRNA-1
chr4_3 CDS 2192242 2192374 2192242 ID=Msa0624210-mRNA-1:cds;Parent=Msa0624210-mRNA-1
chr4_3 CDS 2193333 2193550 2193333 ID=Msa0624210-mRNA-1:cds;Parent=Msa0624210-mRNA-1
chr4_3 CDS 2193635 2193867 2193635 ID=Msa0624210-mRNA-1:cds;Parent=Msa0624210-mRNA-1
chr4_3 CDS 2193953 2194340 2193953 ID=Msa0624210-mRNA-1:cds;Parent=Msa0624210-mRNA-1
chr4_3 CDS 2194812 2195237 2194812 ID=Msa0624210-mRNA-1:cds;Parent=Msa0624210-mRNA-1
chr4_3 three_prime_UTR 2195238 2195859 2195238 ID=Msa0624210-mRNA-1:three_prime_utr;Parent=Msa0624210-mRNA-1
chr4_3 three_prime_UTR 2195880 2195906 2195880 ID=Msa0624210-mRNA-1:three_prime_utr;Parent=Msa0624210-mRNA-1
Gene Sequence

>Msa0624210

ATGGAGGCACTTTCACCAGCTACCTTCTGGATTCTTACAGTCATAATTGCTACTATTCCTTTATGGGCTTTCCAGAAGCTGAATTCCTTGTGGTTGAGACCAAAGAGGTTGGAAAAGCTTCTAAGAGCACAAGGCAAGAGTTCATTTTTATGGGAAGGTAGAATACCAAAAGTGATCATCATGGACCCGGAACAAATCAAACAAGTGTTTAACAAGATGCAAGACTTCACCAAACCAAAGTTCAATTCCCTTGCTAAGTTTTTGTTCGTTGGATTAGTAAGTTATGAGGGTGACGAATGGGCAAAACATCGAAAGATTATAAACCCTGCATTTCACATTGATAAATTGAGAAATATGCTCCCAGCATTTATTCAAAGCAGCCATGATATGATTAGCAAATGGAAGGAAATGTTGACATCAGATGAATCATGCGAGATTGATGTCCGGCCTTTCATTCAAAACTTGACTGGTGATGCGATTTCTAGAACAGCATTTGGCAGCAGCTATGTAGCAGGGTCAAAAATATTTGATCTTATAAGATTGCAGGGGCATATTCTATTTAATACACGAAGTCCGATGAAATGGTTTCTACCTACAAGTTCCAACAAAAGGATGAAGGAAATCGATAGAGAGATTTATGATTTAGTCGAGGGTATCATTAAAATACGAGAGAAAGCCATGGACAATGGAGAAGCCATCAATGATGATTTATTAGGCTTACTGATGGAATCAAATAACCTTGAAATTCAAGGTCATGAAAAGAGTAAGACAGCTGGAATGACATATGATGAAGTAGTTAAAGAATGTAAGCAATTCTACATTGCAGGACAAGAGACCACTGCATCTTTGTTAGTTTGGACAATGGTGTTATTGGCTAGGTTTCCTGAATGGCAAGAACGTGCAAGGCAAGAAGTTTTGCAAGTTTTTGGAAACCAAAATCCAAATCATGATGGGTTAAGTCAACTTAAAATTGTGACCATGGTTTTATATGAGGTCCTGAGATTATATCCACCAACAGTTTTCTTAGTTCGAGCTGTAAAAAAAAATTTAAAACTTGGAAACCTATCGCTACCTGCAGGAATAAATGTTGCCATACCGATACTTTTGGTTCACCATGACTGTGATATATGGGGTGATGATGCAAAAGAGTTTAAACCAGAAAGGTTCTCTGGAGGAATTGCAAAGGCCACAAAAGGTCAAGTTTCATTTTTCCCATTTGGATGGGGTCCTAGAACATGCATTGGCCAAAACTTTGCCTTATTGGAAGCCAAAGTAGTAATGTCACTACTTCTGCAAAATTTCTCATTTGACCTTTCTGCAGACTATAAGCATGATCCCACTGCTATCCTTTCTTTGCAGCCAAAACACGGGGCTAAGATCCGTCTGCAAAAACTGTAA
Protein sequence

>Msa0624210

MEALSPATFWILTVIIATIPLWAFQKLNSLWLRPKRLEKLLRAQGKSSFLWEGRIPKVIIMDPEQIKQVFNKMQDFTKPKFNSLAKFLFVGLVSYEGDEWAKHRKIINPAFHIDKLRNMLPAFIQSSHDMISKWKEMLTSDESCEIDVRPFIQNLTGDAISRTAFGSSYVAGSKIFDLIRLQGHILFNTRSPMKWFLPTSSNKRMKEIDREIYDLVEGIIKIREKAMDNGEAINDDLLGLLMESNNLEIQGHEKSKTAGMTYDEVVKECKQFYIAGQETTASLLVWTMVLLARFPEWQERARQEVLQVFGNQNPNHDGLSQLKIVTMVLYEVLRLYPPTVFLVRAVKKNLKLGNLSLPAGINVAIPILLVHHDCDIWGDDAKEFKPERFSGGIAKATKGQVSFFPFGWGPRTCIGQNFALLEAKVVMSLLLQNFSFDLSADYKHDPTAILSLQPKHGAKIRLQKL*