AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1244200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1244200 MtrunA17_Chr8g0354571 64.062 512 170 3 11 511 16 524 0.0 681
Msa1244200 MtrunA17_Chr8g0354531 64.522 513 167 5 10 511 137 645 0.0 675
Msa1244200 MtrunA17_Chr8g0354511 63.672 512 172 3 11 511 16 524 0.0 662
Msa1244200 MtrunA17_Chr2g0313821 54.651 516 226 2 4 511 1 516 0.0 603
Msa1244200 MtrunA17_Chr2g0313801 55.039 516 224 2 4 511 1 516 0.0 600
Msa1244200 MtrunA17_Chr2g0313781 54.167 528 222 3 4 511 1 528 0.0 597
Msa1244200 MtrunA17_Chr2g0313751 54.813 509 221 4 11 511 36 543 0.0 595
Msa1244200 MtrunA17_Chr2g0313771 54.685 523 224 4 1 511 2 523 0.0 590
Msa1244200 MtrunA17_Chr2g0313791 54.651 516 221 3 4 511 1 511 0.0 589
Msa1244200 MtrunA17_Chr2g0313831 52.794 519 234 3 1 511 1 516 0.0 583
Msa1244200 MtrunA17_Chr5g0446131 53.242 509 229 3 11 511 7 514 0.0 572
Msa1244200 MtrunA17_Chr2g0313811 55.969 511 205 3 21 511 18 528 0.0 570
Msa1244200 MtrunA17_Chr2g0307301 51.866 509 236 3 11 511 11 518 0.0 568
Msa1244200 MtrunA17_Chr2g0313761 55.439 478 204 3 42 511 35 511 0.0 565
Msa1244200 MtrunA17_Chr2g0307291 51.550 516 236 5 9 511 4 518 0.0 559
Msa1244200 MtrunA17_Chr2g0288661 50.962 520 244 5 1 511 1 518 0.0 556
Msa1244200 MtrunA17_Chr4g0014051 47.876 518 258 5 4 511 13 528 9.29e-172 494
Msa1244200 MtrunA17_Chr4g0063221 39.279 499 278 9 30 511 29 519 1.18e-112 343
Msa1244200 MtrunA17_Chr8g0354561 53.517 327 118 4 11 326 98 401 6.48e-112 337
Msa1244200 MtrunA17_Chr1g0193811 37.778 495 290 8 30 511 27 516 3.00e-109 334
Msa1244200 MtrunA17_Chr7g0262111 37.200 500 286 11 25 511 21 505 2.56e-103 319
Msa1244200 MtrunA17_Chr1g0154731 34.818 494 298 9 29 511 23 503 2.50e-97 303
Msa1244200 MtrunA17_Chr6g0457421 32.563 519 315 10 11 511 6 507 1.26e-96 301
Msa1244200 MtrunA17_Chr8g0354541 74.157 178 46 0 334 511 1 178 2.09e-96 289
Msa1244200 MtrunA17_Chr7g0215181 32.755 519 314 12 11 511 8 509 1.59e-94 296
Msa1244200 MtrunA17_Chr7g0235261 33.136 507 305 9 31 511 12 510 1.30e-92 291
Msa1244200 MtrunA17_Chr4g0004601 32.068 527 321 10 11 511 16 531 2.74e-92 291
Msa1244200 MtrunA17_Chr1g0203141 34.073 496 306 11 29 511 28 515 7.70e-92 289
Msa1244200 MtrunA17_Chr3g0128461 30.962 520 329 8 12 510 13 523 1.47e-85 273
Msa1244200 MtrunA17_Chr1g0203151 32.317 492 316 9 29 511 28 511 8.78e-83 266
Msa1244200 MtrunA17_Chr8g0336361 31.034 551 325 10 12 511 12 558 3.97e-82 265
Msa1244200 MtrunA17_Chr6g0472221 33.013 521 323 10 11 511 12 526 2.01e-81 263
Msa1244200 MtrunA17_Chr8g0364081 33.019 530 317 17 11 511 21 541 1.54e-79 258
Msa1244200 MtrunA17_Chr8g0362731 34.837 399 244 8 121 511 18 408 1.49e-78 251
Msa1244200 MtrunA17_Chr6g0479681 31.703 511 311 12 29 511 29 529 3.86e-78 254
Msa1244200 MtrunA17_Chr2g0308651 35.641 390 236 7 137 511 26 415 5.16e-72 235
Msa1244200 MtrunA17_Chr6g0472171 39.855 138 83 0 374 511 21 158 9.65e-37 133
Msa1244200 MtrunA17_Chr1g0179811 25.636 472 311 11 64 510 82 538 1.67e-36 142
Msa1244200 MtrunA17_Chr1g0182861 40.580 138 82 0 374 511 26 163 1.70e-36 132
Msa1244200 MtrunA17_Chr5g0396521 25.624 441 257 12 104 486 117 544 5.78e-35 138
Msa1244200 MtrunA17_Chr0c19g0493771 26.950 423 255 16 90 485 226 621 2.32e-32 131
Msa1244200 MtrunA17_Chr5g0403351 25.977 435 275 13 83 489 61 476 2.36e-32 129
Msa1244200 MtrunA17_Chr6g0472161 27.247 356 239 9 29 371 24 372 2.40e-28 116
Msa1244200 MtrunA17_Chr3g0101631 24.943 441 281 14 79 491 53 471 2.52e-28 117
Msa1244200 MtrunA17_Chr5g0445531 25.576 434 283 13 81 491 58 474 4.15e-28 117
Msa1244200 MtrunA17_Chr5g0445441 26.777 422 272 13 89 490 111 515 9.91e-28 116
Msa1244200 MtrunA17_Chr4g0024771 24.485 437 294 13 89 507 70 488 1.17e-27 115
Msa1244200 MtrunA17_Chr5g0445451 27.660 423 269 13 89 491 70 475 3.42e-27 114
Msa1244200 MtrunA17_Chr3g0101601 26.559 433 271 19 79 484 53 465 8.66e-27 113
Msa1244200 MtrunA17_Chr3g0108651 47.959 98 51 0 396 493 1 98 1.02e-26 104
Msa1244200 MtrunA17_Chr4g0058231 25.629 437 285 17 78 484 43 469 1.56e-26 112
Msa1244200 MtrunA17_Chr5g0445381 26.179 424 274 11 89 491 101 506 2.03e-26 112
Msa1244200 MtrunA17_Chr4g0058191 25.977 435 278 17 78 484 40 458 6.23e-26 110
Msa1244200 MtrunA17_Chr3g0101621 26.027 438 278 18 79 491 50 466 6.99e-26 110
Msa1244200 MtrunA17_Chr1g0162811 23.251 443 308 13 84 507 59 488 8.15e-26 110
Msa1244200 MtrunA17_Chr2g0307311 43.220 118 62 2 41 154 6 122 9.60e-26 102
Msa1244200 MtrunA17_Chr5g0445461 25.708 424 274 14 89 490 70 474 1.35e-25 110
Msa1244200 MtrunA17_Chr5g0403331 25.352 426 279 14 88 489 67 477 4.67e-25 108
Msa1244200 MtrunA17_Chr4g0035921 24.651 430 289 12 87 489 65 486 5.58e-25 108
Msa1244200 MtrunA17_Chr3g0101691 25.173 433 283 16 79 484 55 473 1.28e-24 107
Msa1244200 MtrunA17_Chr8g0372251 26.817 399 257 13 87 461 63 450 1.30e-24 107
Msa1244200 MtrunA17_Chr4g0020041 22.172 442 306 15 87 507 66 490 1.36e-24 107
Msa1244200 MtrunA17_Chr5g0445421 24.879 414 271 11 89 491 144 528 1.52e-24 107
Msa1244200 MtrunA17_Chr3g0116741 24.105 419 287 17 88 487 80 486 2.17e-24 106
Msa1244200 MtrunA17_Chr1g0174461 25.806 434 276 18 84 487 61 478 2.32e-24 106
Msa1244200 MtrunA17_Chr3g0101701 24.306 432 280 15 88 491 68 480 3.78e-24 105
Msa1244200 MtrunA17_Chr3g0101731 22.951 427 290 12 88 491 66 476 8.70e-24 104
Msa1244200 MtrunA17_Chr4g0058201 25.566 442 280 19 78 489 43 465 1.80e-23 103
Msa1244200 MtrunA17_Chr5g0405001 23.990 421 284 11 88 484 73 481 1.87e-23 103
Msa1244200 MtrunA17_Chr5g0431671 23.583 441 296 13 72 491 56 476 2.58e-23 103
Msa1244200 MtrunA17_Chr7g0246221 23.598 428 287 11 88 489 63 476 2.59e-23 103
Msa1244200 MtrunA17_Chr6g0449331 24.838 463 295 21 89 510 64 514 2.71e-23 103
Msa1244200 MtrunA17_Chr4g0076161 23.557 433 283 12 81 484 58 471 3.39e-23 102
Msa1244200 MtrunA17_Chr4g0058261 23.583 441 285 18 78 484 77 499 3.78e-23 102
Msa1244200 MtrunA17_Chr5g0403321 24.424 434 282 15 85 489 63 479 3.87e-23 102
Msa1244200 MtrunA17_Chr3g0101711 22.940 449 295 16 73 491 52 479 4.98e-23 102
Msa1244200 MtrunA17_Chr4g0047641 24.178 426 290 13 80 484 71 484 5.71e-23 102
Msa1244200 MtrunA17_Chr3g0101671 23.653 427 289 14 88 491 68 480 8.21e-23 101
Msa1244200 MtrunA17_Chr1g0184421 25.243 412 256 15 129 510 114 503 1.38e-22 100
Msa1244200 MtrunA17_Chr6g0449341 25.519 482 291 23 78 510 100 562 1.71e-22 100
Msa1244200 MtrunA17_Chr4g0038271 22.851 442 294 13 104 510 130 559 2.16e-22 100
Msa1244200 MtrunA17_Chr5g0431641 24.485 437 296 13 72 491 56 475 2.38e-22 100
Msa1244200 MtrunA17_Chr6g0463791 24.594 431 273 15 89 491 68 474 2.53e-22 100
Msa1244200 MtrunA17_Chr4g0058281 24.235 425 274 17 89 484 76 481 2.91e-22 100
Msa1244200 MtrunA17_Chr1g0182871 31.276 243 156 5 137 375 27 262 4.02e-22 95.9
Msa1244200 MtrunA17_Chr3g0101661 23.131 428 297 14 84 489 60 477 4.03e-22 99.8
Msa1244200 MtrunA17_Chr6g0449381 23.465 456 296 17 91 510 66 504 4.07e-22 99.4
Msa1244200 MtrunA17_Chr8g0390881 23.866 419 292 13 88 487 65 475 4.53e-22 99.4
Msa1244200 MtrunA17_Chr6g0465511 24.884 430 278 14 88 490 64 475 4.88e-22 99.4
Msa1244200 MtrunA17_Chr3g0101721 23.874 444 295 15 88 507 67 491 4.93e-22 99.4
Msa1244200 MtrunA17_Chr7g0255531 24.295 461 304 15 51 482 18 462 5.30e-22 99.4
Msa1244200 MtrunA17_Chr1g0174451 26.398 447 289 18 84 502 62 496 6.03e-22 99.0
Msa1244200 MtrunA17_Chr6g0466331 24.884 430 278 14 88 490 64 475 7.09e-22 98.6
Msa1244200 MtrunA17_Chr3g0101811 23.841 453 297 16 88 507 67 504 7.89e-22 98.6
Msa1244200 MtrunA17_Chr3g0101571 24.036 441 291 18 78 491 51 474 8.25e-22 98.6
Msa1244200 MtrunA17_Chr1g0151221 24.286 490 295 19 76 510 59 527 8.28e-22 98.6
Msa1244200 MtrunA17_Chr8g0380471 26.799 403 234 14 129 509 111 474 1.15e-21 97.8
Msa1244200 MtrunA17_Chr8g0351391 23.779 471 284 19 82 507 67 507 1.33e-21 97.8
Msa1244200 MtrunA17_Chr8g0351401 25.285 439 273 16 103 503 81 502 1.67e-21 97.8
Msa1244200 MtrunA17_Chr8g0344151 25.057 439 280 14 83 491 60 479 1.70e-21 97.8
Msa1244200 MtrunA17_Chr3g0119681 23.641 423 255 12 104 480 86 486 1.80e-21 97.8
Msa1244200 MtrunA17_Chr8g0361471 25.296 423 273 14 88 484 64 469 1.85e-21 97.4
Msa1244200 MtrunA17_Chr7g0248991 25.161 310 214 8 137 435 49 351 1.97e-21 95.9
Msa1244200 MtrunA17_Chr6g0484811 23.571 420 286 13 88 484 66 473 2.28e-21 97.1
Msa1244200 MtrunA17_Chr5g0446161 23.744 438 289 15 79 491 58 475 3.23e-21 96.7
Msa1244200 MtrunA17_Chr8g0351461 25.908 413 256 17 108 485 85 482 3.95e-21 96.7
Msa1244200 MtrunA17_Chr5g0401681 24.201 438 276 17 84 491 57 468 4.03e-21 96.3
Msa1244200 MtrunA17_Chr4g0047631 24.678 466 291 20 54 484 40 480 4.14e-21 96.7
Msa1244200 MtrunA17_Chr4g0052851 26.620 432 268 20 83 493 58 461 5.03e-21 96.3
Msa1244200 MtrunA17_Chr5g0419451 23.858 394 269 14 104 480 105 484 5.09e-21 96.3
Msa1244200 MtrunA17_Chr1g0156101 22.788 452 296 15 88 503 62 496 6.56e-21 95.9
Msa1244200 MtrunA17_Chr8g0334891 23.429 350 234 11 151 488 133 460 6.67e-21 95.5
Msa1244200 MtrunA17_Chr3g0101611 25.478 471 266 22 78 491 53 495 7.15e-21 95.9
Msa1244200 MtrunA17_Chr4g0052861 25.290 431 270 17 89 491 62 468 1.01e-20 95.1
Msa1244200 MtrunA17_Chr7g0260831 21.818 440 290 15 103 510 84 501 1.15e-20 95.1
Msa1244200 MtrunA17_Chr4g0046331 24.832 447 277 19 82 490 55 480 1.30e-20 95.1
Msa1244200 MtrunA17_Chr8g0344181 25.227 440 278 16 83 491 62 481 1.34e-20 94.7
Msa1244200 MtrunA17_Chr2g0280081 25.753 365 237 12 140 482 120 472 1.71e-20 95.5
Msa1244200 MtrunA17_Chr2g0280081 28.571 294 179 12 210 482 690 973 1.52e-19 92.4
Msa1244200 MtrunA17_Chr1g0164321 22.838 451 302 14 97 510 105 546 2.08e-20 94.4
Msa1244200 MtrunA17_Chr4g0026941 25.180 417 249 16 104 480 114 507 2.22e-20 94.4
Msa1244200 MtrunA17_Chr8g0351311 22.698 467 295 16 82 507 67 508 2.25e-20 94.4
Msa1244200 MtrunA17_Chr4g0047661 22.986 422 285 15 89 484 78 485 2.54e-20 94.0
Msa1244200 MtrunA17_Chr4g0058211 32.022 178 118 3 309 484 10 186 2.77e-20 89.4
Msa1244200 MtrunA17_Chr4g0047691 24.419 430 289 16 78 484 67 483 2.83e-20 94.0
Msa1244200 MtrunA17_Chr3g0084921 24.714 437 282 20 84 487 60 482 4.05e-20 93.6
Msa1244200 MtrunA17_Chr6g0449361 22.432 477 303 20 77 510 50 502 4.35e-20 93.2
Msa1244200 MtrunA17_Chr8g0364651 27.500 240 162 6 253 485 235 469 5.07e-20 93.2
Msa1244200 MtrunA17_Chr7g0227281 23.319 476 292 19 78 510 48 493 5.24e-20 92.8
Msa1244200 MtrunA17_Chr3g0101821 24.709 429 283 13 84 486 57 471 6.70e-20 92.8
Msa1244200 MtrunA17_Chr4g0046351 23.371 445 284 17 82 490 55 478 6.80e-20 92.8
Msa1244200 MtrunA17_Chr3g0101751 24.208 442 296 12 88 507 72 496 1.01e-19 92.0
Msa1244200 MtrunA17_Chr1g0174441 23.908 435 285 16 84 487 81 500 1.34e-19 92.0
Msa1244200 MtrunA17_Chr8g0390871 30.588 170 116 2 320 487 28 197 1.71e-19 87.8
Msa1244200 MtrunA17_Chr6g0463801 24.762 420 286 11 88 491 67 472 1.94e-19 91.3
Msa1244200 MtrunA17_Chr3g0101761 23.982 442 297 13 88 507 65 489 2.17e-19 91.3
Msa1244200 MtrunA17_Chr7g0235551 24.888 446 296 16 76 491 47 483 2.40e-19 90.9
Msa1244200 MtrunA17_Chr1g0163491 22.588 456 290 15 97 510 86 520 2.53e-19 90.9
Msa1244200 MtrunA17_Chr5g0446151 23.394 436 294 13 79 491 58 476 2.54e-19 90.9
Msa1244200 MtrunA17_Chr1g0204271 23.834 386 233 14 137 485 118 479 2.55e-19 90.9
Msa1244200 MtrunA17_Chr3g0101651 23.112 437 291 15 84 491 60 480 2.85e-19 90.9
Msa1244200 MtrunA17_Chr8g0377341 26.119 402 260 15 99 480 109 493 3.07e-19 90.9
Msa1244200 MtrunA17_Chr1g0163451 27.839 273 165 10 254 510 267 523 3.32e-19 90.5
Msa1244200 MtrunA17_Chr4g0004481 23.142 471 288 17 85 511 52 492 3.64e-19 90.5
Msa1244200 MtrunA17_Chr2g0280011 30.928 194 124 4 311 495 1 193 3.69e-19 86.3
Msa1244200 MtrunA17_Chr1g0174481 24.942 433 278 16 84 487 59 473 4.45e-19 90.1
Msa1244200 MtrunA17_Chr8g0351421 23.756 442 289 17 78 485 56 483 4.87e-19 90.1
Msa1244200 MtrunA17_Chr1g0163391 24.672 458 260 19 104 510 78 501 4.96e-19 90.1
Msa1244200 MtrunA17_Chr8g0387101 31.746 189 118 5 306 484 289 476 5.64e-19 89.7
Msa1244200 MtrunA17_Chr1g0163371 29.956 227 136 7 299 510 3 221 5.85e-19 85.9
Msa1244200 MtrunA17_Chr8g0351441 24.538 379 243 12 137 485 117 482 6.24e-19 89.7
Msa1244200 MtrunA17_Chr6g0451751 24.594 431 272 16 89 480 73 489 7.48e-19 89.7
Msa1244200 MtrunA17_Chr4g0046321 22.454 432 294 13 82 484 55 474 7.52e-19 89.7
Msa1244200 MtrunA17_Chr3g0101581 22.343 461 311 14 78 506 52 497 7.55e-19 89.4
Msa1244200 MtrunA17_Chr4g0067191 23.581 458 281 17 106 510 73 514 7.56e-19 89.4
Msa1244200 MtrunA17_Chr5g0430081 22.624 442 314 15 88 511 64 495 9.51e-19 89.4
Msa1244200 MtrunA17_Chr2g0321171 24.605 443 261 15 104 508 88 495 9.76e-19 89.0
Msa1244200 MtrunA17_Chr7g0225531 26.786 280 180 8 240 510 247 510 1.07e-18 89.0
Msa1244200 MtrunA17_Chr6g0449351 22.199 473 309 20 78 511 11 463 1.10e-18 89.0
Msa1244200 MtrunA17_Chr1g0162801 23.462 439 299 14 90 507 69 491 1.13e-18 89.0
Msa1244200 MtrunA17_Chr5g0431511 22.196 428 300 15 84 489 59 475 1.22e-18 89.0
Msa1244200 MtrunA17_Chr5g0431591 25.083 303 205 7 201 491 1 293 1.26e-18 87.0
Msa1244200 MtrunA17_Chr8g0387001 22.717 449 295 12 95 509 73 503 1.78e-18 88.2
Msa1244200 MtrunA17_Chr2g0280071 26.829 328 215 10 174 484 188 507 1.86e-18 89.0
Msa1244200 MtrunA17_Chr1g0205361 25.098 255 176 7 239 489 227 470 1.94e-18 88.2
Msa1244200 MtrunA17_Chr7g0258221 23.702 443 304 14 83 503 58 488 2.40e-18 87.8
Msa1244200 MtrunA17_Chr5g0430031 22.122 443 315 15 88 511 66 497 2.52e-18 87.8
Msa1244200 MtrunA17_Chr1g0163281 22.992 361 223 9 185 510 178 518 2.60e-18 87.8
Msa1244200 MtrunA17_Chr8g0344191 25.227 440 279 18 83 491 93 513 3.09e-18 87.8
Msa1244200 MtrunA17_Chr8g0334941 24.224 322 210 11 175 484 2 301 3.47e-18 85.9
Msa1244200 MtrunA17_Chr7g0265611 26.263 297 204 8 200 487 198 488 3.79e-18 87.4
Msa1244200 MtrunA17_Chr7g0227291 23.176 466 288 16 87 510 56 493 4.06e-18 87.0
Msa1244200 MtrunA17_Chr4g0017411 25.227 440 274 19 83 496 55 465 4.17e-18 87.0
Msa1244200 MtrunA17_Chr1g0163421 22.687 454 293 17 97 510 104 539 5.96e-18 87.0
Msa1244200 MtrunA17_Chr2g0307321 41.935 93 50 1 165 253 1 93 6.66e-18 79.3
Msa1244200 MtrunA17_Chr4g0053621 24.346 382 239 13 139 493 116 474 6.67e-18 86.7
Msa1244200 MtrunA17_Chr3g0116681 24.700 417 278 15 89 484 70 471 6.97e-18 86.7
Msa1244200 MtrunA17_Chr2g0280121 26.301 365 237 13 140 482 124 478 7.51e-18 86.3
Msa1244200 MtrunA17_Chr1g0164211 25.098 255 176 6 239 489 224 467 9.01e-18 86.3
Msa1244200 MtrunA17_Chr7g0224561 23.529 425 282 16 88 484 61 470 9.62e-18 86.3
Msa1244200 MtrunA17_Chr1g0200951 21.395 430 287 14 99 498 105 513 1.03e-17 85.9
Msa1244200 MtrunA17_Chr5g0431501 22.685 432 297 13 84 491 59 477 1.03e-17 85.9
Msa1244200 MtrunA17_Chr5g0431461 22.685 432 297 13 84 491 59 477 1.03e-17 85.9
Msa1244200 MtrunA17_Chr5g0400411 24.879 414 278 13 81 483 71 462 1.10e-17 85.9
Msa1244200 MtrunA17_Chr8g0339331 22.300 426 295 11 89 487 71 487 1.15e-17 85.9
Msa1244200 MtrunA17_Chr1g0198191 28.000 250 165 8 242 480 236 481 1.26e-17 85.9
Msa1244200 MtrunA17_Chr7g0246151 25.100 251 176 5 239 485 229 471 1.48e-17 85.5
Msa1244200 MtrunA17_Chr8g0380501 24.353 464 290 19 85 510 50 490 1.98e-17 85.1
Msa1244200 MtrunA17_Chr6g0472311 28.426 197 136 4 299 491 296 491 2.19e-17 85.1
Msa1244200 MtrunA17_Chr8g0362481 23.641 423 280 16 96 489 3 411 2.57e-17 84.3
Msa1244200 MtrunA17_Chr6g0466901 22.821 390 262 12 136 496 119 498 3.33e-17 84.3
Msa1244200 MtrunA17_Chr3g0135841 23.139 497 297 17 76 510 62 535 3.40e-17 84.3
Msa1244200 MtrunA17_Chr7g0260821 22.062 417 255 17 103 480 85 470 3.40e-17 84.3
Msa1244200 MtrunA17_Chr8g0357421 22.973 444 297 14 88 507 67 489 3.71e-17 84.3
Msa1244200 MtrunA17_Chr5g0430071 24.092 303 211 9 222 511 54 350 4.07e-17 83.2
Msa1244200 MtrunA17_Chr3g0101801 23.888 427 287 13 88 491 72 483 5.07e-17 84.0
Msa1244200 MtrunA17_Chr1g0174431 28.351 194 124 4 318 497 1 193 5.16e-17 80.1
Msa1244200 MtrunA17_Chr5g0401691 23.756 442 259 13 79 480 71 474 5.24e-17 84.0
Msa1244200 MtrunA17_Chr7g0258211 21.875 448 301 15 75 491 58 487 5.44e-17 83.6
Msa1244200 MtrunA17_Chr4g0011981 25.085 295 194 9 206 484 181 464 7.25e-17 83.2
Msa1244200 MtrunA17_Chr8g0357431 24.027 437 302 14 88 507 67 490 7.45e-17 83.2
Msa1244200 MtrunA17_Chr2g0280061 29.897 194 126 4 311 495 1 193 9.42e-17 79.3
Msa1244200 MtrunA17_Chr1g0160861 25.461 271 182 9 244 510 73 327 1.08e-16 81.3
Msa1244200 MtrunA17_Chr7g0218611 23.853 327 214 11 176 483 157 467 1.09e-16 82.8
Msa1244200 MtrunA17_Chr1g0197871 28.571 210 138 5 280 487 267 466 1.13e-16 82.8
Msa1244200 MtrunA17_Chr7g0224551 23.059 425 284 16 88 484 61 470 1.15e-16 82.8
Msa1244200 MtrunA17_Chr1g0163501 24.276 449 272 17 104 510 76 498 1.22e-16 82.4
Msa1244200 MtrunA17_Chr6g0458561 22.770 426 290 15 89 487 87 500 1.55e-16 82.4
Msa1244200 MtrunA17_Chr5g0443401 22.500 440 294 13 82 502 67 478 1.83e-16 82.0
Msa1244200 MtrunA17_Chr4g0052881 24.113 423 266 15 88 480 61 458 1.88e-16 82.0
Msa1244200 MtrunA17_Chr2g0280041 29.787 188 122 4 306 484 320 506 2.22e-16 82.0
Msa1244200 MtrunA17_Chr4g0011851 28.743 167 116 3 320 484 18 183 2.70e-16 77.8
Msa1244200 MtrunA17_Chr1g0163461 22.467 454 294 17 97 510 83 518 2.84e-16 81.6
Msa1244200 MtrunA17_Chr8g0362701 23.557 433 296 15 84 491 60 482 3.02e-16 81.3
Msa1244200 MtrunA17_Chr1g0184461 23.940 401 259 14 137 510 122 503 3.08e-16 81.3
Msa1244200 MtrunA17_Chr1g0163211 22.766 470 305 17 78 510 52 500 3.24e-16 81.3
Msa1244200 MtrunA17_Chr8g0351801 23.529 255 180 4 249 489 238 491 3.87e-16 81.3
Msa1244200 MtrunA17_Chr3g0086651 23.358 411 273 14 104 484 76 474 4.48e-16 80.9
Msa1244200 MtrunA17_Chr6g0463621 25.389 193 135 4 319 506 2 190 4.94e-16 77.0
Msa1244200 MtrunA17_Chr4g0011961 24.752 303 196 9 200 484 175 463 4.99e-16 80.5
Msa1244200 MtrunA17_Chr5g0446101 27.179 195 139 3 299 491 95 288 5.17e-16 79.0
Msa1244200 MtrunA17_Chr5g0430101 21.667 420 291 14 88 484 65 469 5.66e-16 80.5
Msa1244200 MtrunA17_Chr3g0086661 23.358 411 273 14 104 484 76 474 7.10e-16 80.1
Msa1244200 MtrunA17_Chr1g0174471 24.256 437 285 16 84 489 75 496 7.15e-16 80.5
Msa1244200 MtrunA17_Chr1g0197851 26.506 249 170 6 239 484 225 463 8.32e-16 80.1
Msa1244200 MtrunA17_Chr6g0451681 29.944 177 118 5 309 480 267 442 8.56e-16 79.7
Msa1244200 MtrunA17_Chr6g0451781 23.488 430 278 17 89 480 106 522 9.17e-16 80.1
Msa1244200 MtrunA17_Chr5g0403451 26.667 225 131 6 318 510 56 278 9.35e-16 77.8
Msa1244200 MtrunA17_Chr8g0372711 28.492 179 118 3 310 484 286 458 1.09e-15 79.7
Msa1244200 MtrunA17_Chr1g0210091 23.490 447 280 13 71 480 81 502 1.15e-15 79.7
Msa1244200 MtrunA17_Chr1g0163351 22.340 470 298 16 87 510 56 504 1.28e-15 79.3
Msa1244200 MtrunA17_Chr1g0197881 26.506 249 170 6 239 484 224 462 1.31e-15 79.3
Msa1244200 MtrunA17_Chr2g0296661 25.556 450 269 19 78 491 54 473 1.37e-15 79.3
Msa1244200 MtrunA17_Chr8g0382901 23.150 419 294 13 75 484 44 443 1.41e-15 80.1
Msa1244200 MtrunA17_Chr8g0382901 22.066 426 289 13 83 484 516 922 1.03e-13 73.9
Msa1244200 MtrunA17_Chr4g0046631 24.524 420 276 16 89 480 78 484 1.48e-15 79.3
Msa1244200 MtrunA17_Chr1g0167321 22.737 453 311 13 79 507 51 488 1.51e-15 79.3
Msa1244200 MtrunA17_Chr3g0082701 26.300 327 203 11 181 480 175 490 1.52e-15 79.3
Msa1244200 MtrunA17_Chr5g0413911 27.807 187 127 4 301 480 310 495 1.72e-15 79.0
Msa1244200 MtrunA17_Chr5g0430131 24.080 299 202 9 201 484 183 471 2.06e-15 79.0
Msa1244200 MtrunA17_Chr1g0197891 26.104 249 171 6 239 484 225 463 2.17e-15 78.6
Msa1244200 MtrunA17_Chr3g0101831 23.866 419 286 13 88 486 67 472 2.63e-15 78.6
Msa1244200 MtrunA17_Chr3g0086691 23.251 443 291 18 77 484 46 474 2.83e-15 78.6
Msa1244200 MtrunA17_Chr5g0395381 26.809 235 155 7 258 489 225 445 2.94e-15 78.2
Msa1244200 MtrunA17_Chr1g0160851 27.586 174 123 3 318 489 298 470 3.03e-15 78.2
Msa1244200 MtrunA17_Chr6g0484841 21.535 469 316 15 50 484 22 472 3.51e-15 78.2
Msa1244200 MtrunA17_Chr3g0094231 29.480 173 116 5 317 484 299 470 3.66e-15 78.2
Msa1244200 MtrunA17_Chr5g0395331 24.569 232 161 5 260 489 258 477 3.74e-15 78.2
Msa1244200 MtrunA17_Chr1g0178971 25.000 412 255 15 104 484 93 481 3.95e-15 77.8
Msa1244200 MtrunA17_Chr5g0395321 21.459 466 317 16 51 489 27 470 4.12e-15 77.8
Msa1244200 MtrunA17_Chr5g0430091 22.566 452 302 16 88 511 66 497 4.97e-15 77.8
Msa1244200 MtrunA17_Chr7g0246121 25.000 236 167 4 258 491 248 475 5.96e-15 77.4
Msa1244200 MtrunA17_Chr2g0334021 28.947 190 120 4 308 484 283 470 6.33e-15 77.4
Msa1244200 MtrunA17_Chr8g0356001 26.906 223 146 6 266 484 265 474 6.39e-15 77.4
Msa1244200 MtrunA17_Chr5g0419691 23.101 316 230 4 171 484 160 464 6.46e-15 77.0
Msa1244200 MtrunA17_Chr4g0039391 29.310 174 119 4 320 491 306 477 7.97e-15 77.0
Msa1244200 MtrunA17_Chr2g0304871 24.208 442 289 20 89 498 71 498 8.21e-15 77.0
Msa1244200 MtrunA17_Chr5g0429651 26.894 264 165 7 266 509 251 506 8.21e-15 77.0
Msa1244200 MtrunA17_Chr4g0008101 22.356 416 272 14 104 480 86 489 8.22e-15 77.0
Msa1244200 MtrunA17_Chr5g0409051 26.374 182 127 4 309 484 299 479 8.36e-15 77.0
Msa1244200 MtrunA17_Chr2g0314731 25.097 259 174 7 257 511 244 486 1.13e-14 76.3
Msa1244200 MtrunA17_Chr5g0400421 29.240 171 111 3 318 483 298 463 1.16e-14 76.3
Msa1244200 MtrunA17_Chr8g0369791 22.398 442 288 16 82 508 61 462 1.34e-14 76.3
Msa1244200 MtrunA17_Chr4g0046681 30.233 172 115 5 313 480 26 196 1.60e-14 73.2
Msa1244200 MtrunA17_Chr7g0218601 24.631 203 145 4 282 484 273 467 1.73e-14 75.9
Msa1244200 MtrunA17_Chr3g0104351 23.039 408 257 12 137 508 127 513 1.83e-14 75.9
Msa1244200 MtrunA17_Chr1g0205371 26.378 254 174 6 239 489 228 471 2.03e-14 75.5
Msa1244200 MtrunA17_Chr4g0011901 23.488 430 299 14 74 484 46 464 3.51e-14 75.1
Msa1244200 MtrunA17_Chr4g0011871 23.113 424 278 13 90 484 61 465 3.58e-14 74.7
Msa1244200 MtrunA17_Chr7g0246131 26.275 255 178 6 239 489 229 477 5.01e-14 74.3
Msa1244200 MtrunA17_Chr2g0293411 26.111 180 123 3 309 483 286 460 7.50e-14 73.9
Msa1244200 MtrunA17_Chr4g0011941 26.347 167 120 3 320 484 3 168 8.70e-14 70.5
Msa1244200 MtrunA17_Chr6g0451691 26.531 245 156 7 249 480 260 493 1.17e-13 73.6
Msa1244200 MtrunA17_Chr5g0406651 23.641 423 276 14 90 484 62 465 1.67e-13 72.8
Msa1244200 MtrunA17_Chr7g0254641 21.053 475 327 14 58 490 20 488 2.21e-13 72.4
Msa1244200 MtrunA17_Chr3g0101591 27.711 166 117 3 321 484 42 206 2.94e-13 69.7
Msa1244200 MtrunA17_Chr3g0141801 22.991 448 294 17 79 508 67 481 3.00e-13 72.0
Msa1244200 MtrunA17_Chr1g0153371 22.010 418 286 14 77 484 56 443 3.90e-13 71.6
Msa1244200 MtrunA17_Chr1g0156081 21.508 451 309 15 85 503 83 520 4.75e-13 71.6
Msa1244200 MtrunA17_Chr6g0451741 26.230 244 157 7 249 480 279 511 5.38e-13 71.2
Msa1244200 MtrunA17_Chr6g0451811 29.268 164 111 4 321 480 8 170 5.70e-13 68.2
Msa1244200 MtrunA17_Chr5g0408181 23.529 442 283 16 82 508 59 460 6.25e-13 70.9
Msa1244200 MtrunA17_Chr2g0280261 25.229 436 286 14 79 491 51 469 7.12e-13 70.9
Msa1244200 MtrunA17_Chr4g0056951 21.429 420 278 17 77 465 62 460 8.72e-13 70.5
Msa1244200 MtrunA17_Chr8g0348751 20.267 449 291 12 104 508 82 507 9.22e-13 70.5
Msa1244200 MtrunA17_Chr2g0314781 28.177 181 119 5 334 511 1 173 2.15e-12 65.5
Msa1244200 MtrunA17_Chr4g0046661 31.694 183 119 6 305 482 11 192 3.36e-12 66.2
Msa1244200 MtrunA17_Chr4g0057001 24.514 257 183 6 242 491 239 491 5.02e-12 68.2
Msa1244200 MtrunA17_Chr1g0163401 22.477 436 259 15 127 510 103 511 5.34e-12 68.2
Msa1244200 MtrunA17_Chr5g0430041 27.419 124 89 1 365 487 23 146 1.23e-11 63.5
Msa1244200 MtrunA17_Chr2g0296651 22.251 382 250 13 133 491 111 468 1.31e-11 67.0
Msa1244200 MtrunA17_Chr5g0430151 26.613 124 90 1 365 487 23 146 2.00e-11 63.2
Msa1244200 MtrunA17_Chr5g0445371 24.380 242 145 6 251 491 1 205 2.49e-11 63.9
Msa1244200 MtrunA17_Chr4g0011921 24.367 316 208 11 187 484 162 464 2.61e-11 65.9
Msa1244200 MtrunA17_Chr3g0101541 29.688 128 88 2 365 491 1 127 3.39e-11 61.2
Msa1244200 MtrunA17_Chr7g0246181 26.016 246 169 6 244 485 235 471 4.55e-11 65.1
Msa1244200 MtrunA17_Chr1g0156061 24.809 262 177 7 248 503 205 452 7.20e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1244200 AT3G14690.1 49.116 509 244 4 12 511 10 512 0.0 532
Msa1244200 AT3G14690.2 49.116 509 244 4 12 511 45 547 0.0 531
Msa1244200 AT3G14680.1 50.202 496 232 4 25 511 23 512 0.0 521
Msa1244200 AT3G14660.1 49.597 496 235 4 25 511 23 512 1.16e-180 517
Msa1244200 AT3G14610.1 49.000 500 239 5 22 511 19 512 6.81e-178 510
Msa1244200 AT3G14640.1 48.996 498 237 5 25 511 23 514 1.12e-176 507
Msa1244200 AT3G14640.2 48.996 498 237 5 25 511 45 536 3.43e-176 506
Msa1244200 AT3G14650.1 48.589 496 240 4 25 511 23 512 1.71e-175 504
Msa1244200 AT3G14630.1 48.932 515 241 7 12 511 1 508 2.86e-175 503
Msa1244200 AT3G14630.2 48.932 515 241 7 12 511 56 563 7.46e-175 504
Msa1244200 AT3G14620.1 48.185 496 237 6 22 506 24 510 6.88e-170 490
Msa1244200 AT3G14660.2 50.986 355 163 3 162 511 18 366 1.71e-129 381
Msa1244200 AT2G26710.1 38.685 517 285 9 11 511 15 515 5.39e-127 380
Msa1244200 AT3G14660.3 45.658 357 179 4 25 372 23 373 2.70e-109 330
Msa1244200 AT2G46960.2 36.364 506 295 11 24 511 21 517 7.52e-106 326
Msa1244200 AT4G27710.1 36.527 501 287 9 30 511 29 517 5.04e-102 316
Msa1244200 AT2G46950.1 36.364 495 288 12 33 511 87 570 2.94e-100 313
Msa1244200 AT1G75130.1 34.205 497 300 9 28 511 21 503 3.58e-96 301
Msa1244200 AT5G24910.1 33.520 537 316 13 1 508 5 529 2.33e-92 291
Msa1244200 AT2G46960.1 38.182 385 219 7 137 511 26 401 1.09e-90 283
Msa1244200 AT5G52400.1 33.021 533 321 12 1 511 1 519 2.50e-87 278
Msa1244200 AT5G24900.1 32.863 496 302 11 36 508 37 524 1.39e-86 276
Msa1244200 AT5G38450.1 31.907 514 331 9 11 511 9 516 5.93e-85 272
Msa1244200 AT1G67110.1 30.291 515 333 7 10 511 9 510 7.71e-81 261
Msa1244200 AT5G24900.2 35.844 385 227 7 137 508 30 407 8.24e-81 258
Msa1244200 AT1G17060.1 35.688 269 165 3 22 282 22 290 1.38e-57 194
Msa1244200 AT2G46950.2 33.521 355 209 12 33 371 87 430 5.20e-51 180
Msa1244200 AT4G27710.2 33.333 357 202 10 30 366 29 369 2.55e-50 177
Msa1244200 AT5G24910.2 28.087 413 256 13 1 384 5 405 2.02e-40 150
Msa1244200 AT3G53130.1 25.054 463 325 11 64 510 82 538 1.28e-36 142
Msa1244200 AT5G38450.2 26.963 382 263 8 11 379 9 387 1.63e-34 134
Msa1244200 AT4G15110.1 25.901 444 249 14 104 484 124 550 4.70e-33 133
Msa1244200 AT1G67110.2 25.600 375 256 6 10 371 9 373 2.64e-30 122
Msa1244200 AT3G48310.1 23.821 424 289 14 89 495 62 468 7.73e-30 122
Msa1244200 AT1G31800.1 25.366 410 278 10 90 485 147 542 6.55e-29 120
Msa1244200 AT2G44890.1 24.374 439 288 13 78 485 56 481 3.01e-28 118
Msa1244200 AT2G45510.1 23.756 442 291 14 76 485 54 481 3.74e-28 118
Msa1244200 AT3G48280.1 25.352 426 283 15 88 495 59 467 5.10e-28 117
Msa1244200 AT3G48270.1 23.810 420 294 12 89 495 61 467 6.34e-28 117
Msa1244200 AT3G48290.1 24.586 423 282 13 89 491 63 468 8.34e-28 116
Msa1244200 AT3G48300.1 24.515 412 275 15 89 482 59 452 1.73e-27 115
Msa1244200 AT3G48300.2 24.515 412 275 15 89 482 61 454 1.76e-27 115
Msa1244200 AT4G13310.1 25.110 454 289 16 78 498 47 482 1.60e-26 113
Msa1244200 AT2G30770.1 24.194 434 287 12 84 491 54 471 6.19e-26 111
Msa1244200 AT3G48290.2 24.605 443 283 16 89 491 63 494 6.37e-26 111
Msa1244200 AT4G13290.1 24.724 453 274 18 83 498 53 475 1.66e-25 110
Msa1244200 AT5G24950.1 23.963 434 289 14 84 491 53 471 4.12e-25 108
Msa1244200 AT3G26125.1 23.474 426 276 13 121 508 116 529 7.17e-24 105
Msa1244200 AT2G44890.2 23.908 435 277 13 78 485 56 463 8.13e-24 105
Msa1244200 AT1G11680.1 24.928 349 230 10 151 488 135 462 1.58e-23 103
Msa1244200 AT2G26170.1 25.155 485 284 19 76 510 65 520 2.37e-23 103
Msa1244200 AT1G57750.1 32.308 195 121 4 320 510 308 495 3.37e-23 103
Msa1244200 AT3G26310.1 23.557 433 292 15 78 484 45 464 3.76e-23 103
Msa1244200 AT5G23190.1 22.991 448 296 15 97 508 103 537 7.05e-23 102
Msa1244200 AT4G39510.1 33.005 203 120 5 318 510 308 504 7.68e-23 102
Msa1244200 AT5G04660.1 28.926 242 161 6 245 480 241 477 8.51e-23 102
Msa1244200 AT4G37400.1 24.884 430 283 15 73 480 45 456 1.09e-22 101
Msa1244200 AT5G08250.1 22.889 450 297 15 97 510 42 477 1.89e-22 100
Msa1244200 AT3G48320.1 24.113 423 289 14 89 495 62 468 2.06e-22 100
Msa1244200 AT5G08250.2 22.889 450 297 15 97 510 104 539 2.35e-22 100
Msa1244200 AT5G06900.1 22.831 438 302 15 75 491 50 472 2.66e-22 100
Msa1244200 AT3G26300.1 23.266 447 290 16 78 491 46 472 2.69e-22 100
Msa1244200 AT2G26170.2 25.325 462 269 18 99 510 2 437 3.53e-22 99.4
Msa1244200 AT3G10560.1 27.572 243 163 6 244 480 243 478 5.71e-22 99.4
Msa1244200 AT2G23180.1 28.966 290 180 10 239 510 230 511 6.85e-22 99.4
Msa1244200 AT1G47620.1 33.000 200 125 4 318 510 317 514 8.45e-22 99.0
Msa1244200 AT5G52320.1 27.239 268 165 6 270 511 239 502 8.79e-22 99.0
Msa1244200 AT1G24540.1 22.247 445 307 13 96 509 82 518 9.42e-22 99.0
Msa1244200 AT1G11610.1 23.404 423 288 12 83 484 57 464 1.15e-21 98.6
Msa1244200 AT1G13710.1 24.648 426 286 15 104 507 96 508 1.17e-21 98.6
Msa1244200 AT2G21910.1 29.218 243 156 7 276 510 271 505 1.17e-21 98.6
Msa1244200 AT1G11610.2 23.944 426 286 13 83 487 57 465 1.49e-21 98.2
Msa1244200 AT4G39500.1 31.633 196 131 3 318 510 270 465 2.75e-21 97.1
Msa1244200 AT3G26270.1 22.864 433 295 16 83 489 56 475 3.01e-21 97.4
Msa1244200 AT4G37340.1 25.845 414 258 16 105 493 79 468 3.28e-21 97.1
Msa1244200 AT5G25120.1 23.753 421 278 15 89 484 59 461 4.41e-21 96.7
Msa1244200 AT4G39500.2 31.633 196 131 3 318 510 320 515 4.49e-21 96.7
Msa1244200 AT3G26210.1 23.716 409 274 17 99 483 71 465 5.78e-21 96.3
Msa1244200 AT3G26320.1 22.777 461 311 15 54 484 20 465 7.90e-21 95.9
Msa1244200 AT4G13770.1 26.154 325 211 8 185 491 161 474 8.97e-21 95.9
Msa1244200 AT3G25180.1 27.361 413 253 17 104 487 86 480 9.86e-21 95.9
Msa1244200 AT5G52320.2 27.481 262 160 6 270 505 239 496 1.04e-20 95.5
Msa1244200 AT1G50560.1 25.223 337 214 9 192 505 184 505 1.43e-20 95.1
Msa1244200 AT3G26280.2 24.306 432 277 17 83 483 73 485 1.44e-20 95.1
Msa1244200 AT3G26280.1 24.306 432 277 17 83 483 56 468 1.59e-20 95.1
Msa1244200 AT3G26230.1 24.256 437 287 16 83 489 50 472 2.28e-20 94.4
Msa1244200 AT3G26830.1 21.689 438 271 12 90 485 59 466 2.85e-20 94.4
Msa1244200 AT5G02900.1 32.000 200 129 5 318 510 279 478 2.99e-20 94.0
Msa1244200 AT1G65340.1 26.154 325 196 10 203 511 207 503 4.62e-20 93.6
Msa1244200 AT5G09970.1 24.574 411 265 15 99 482 112 504 4.77e-20 93.6
Msa1244200 AT2G14100.1 24.648 426 276 13 89 487 74 481 5.49e-20 93.6
Msa1244200 AT4G36220.1 23.059 425 289 9 88 484 69 483 7.51e-20 93.2
Msa1244200 AT4G31500.1 25.284 352 230 12 157 489 134 471 8.54e-20 92.8
Msa1244200 AT1G13100.1 22.093 430 296 15 89 491 55 472 1.41e-19 92.0
Msa1244200 AT4G32170.1 31.683 202 124 5 318 510 306 502 2.76e-19 91.3
Msa1244200 AT4G15360.1 22.118 425 289 13 89 487 71 479 3.33e-19 91.3
Msa1244200 AT4G19230.1 24.163 418 272 13 102 510 80 461 3.92e-19 90.5
Msa1244200 AT2G30750.1 24.299 428 292 11 83 491 57 471 4.73e-19 90.5
Msa1244200 AT1G13090.2 22.350 434 297 13 89 497 58 476 5.16e-19 90.5
Msa1244200 AT3G10570.1 26.695 236 163 5 250 480 248 478 5.23e-19 90.5
Msa1244200 AT4G39480.1 28.862 246 146 7 286 510 275 512 5.43e-19 90.5
Msa1244200 AT5G36220.1 25.205 365 236 14 143 491 129 472 6.15e-19 90.1
Msa1244200 AT5G07990.1 23.799 437 295 16 77 486 47 472 6.37e-19 90.1
Msa1244200 AT3G20950.1 25.887 282 178 8 226 487 216 486 6.43e-19 90.1
Msa1244200 AT5G47990.1 23.202 431 288 17 79 480 59 475 6.67e-19 90.1
Msa1244200 AT3G44250.1 21.262 428 305 14 79 484 48 465 7.02e-19 90.1
Msa1244200 AT1G13140.1 22.196 419 280 13 122 508 117 521 8.71e-19 89.7
Msa1244200 AT1G11600.1 26.578 301 199 10 210 493 194 489 9.17e-19 89.7
Msa1244200 AT1G34540.1 22.851 442 294 17 99 510 72 496 1.32e-18 89.0
Msa1244200 AT3G20935.1 24.710 259 174 5 249 487 51 308 1.39e-18 87.8
Msa1244200 AT4G19230.2 24.289 387 255 11 102 482 80 434 1.53e-18 89.0
Msa1244200 AT5G04630.1 28.632 234 156 7 253 480 246 474 1.58e-18 89.0
Msa1244200 AT5G63450.1 23.235 439 284 16 104 510 84 501 2.09e-18 88.6
Msa1244200 AT4G15380.1 23.767 446 293 14 89 506 73 499 2.61e-18 88.2
Msa1244200 AT5G63450.2 23.235 439 284 16 104 510 142 559 2.82e-18 88.6
Msa1244200 AT4G15330.2 25.417 240 162 5 254 487 220 448 3.13e-18 87.8
Msa1244200 AT4G39490.1 29.907 214 124 6 318 510 307 515 3.44e-18 87.8
Msa1244200 AT4G15330.1 25.417 240 162 5 254 487 248 476 3.46e-18 87.8
Msa1244200 AT1G13140.2 22.333 403 273 12 122 508 117 495 3.62e-18 87.8
Msa1244200 AT1G50520.1 25.321 312 208 9 192 487 183 485 4.45e-18 87.8
Msa1244200 AT4G12320.1 27.586 261 172 8 252 509 254 500 5.40e-18 87.4
Msa1244200 AT5G35715.1 22.304 408 286 14 99 485 6 403 5.64e-18 86.7
Msa1244200 AT5G10600.1 23.146 445 259 17 83 483 71 476 5.71e-18 87.4
Msa1244200 AT4G37430.1 23.077 468 306 17 50 483 15 462 6.01e-18 87.0
Msa1244200 AT5G25140.1 22.967 418 285 14 89 484 59 461 6.08e-18 87.0
Msa1244200 AT3G20120.4 21.319 455 314 16 81 505 60 500 6.15e-18 87.0
Msa1244200 AT2G27010.1 20.331 423 301 10 82 487 55 458 8.76e-18 86.7
Msa1244200 AT3G20140.1 21.882 425 287 14 89 487 73 478 9.83e-18 86.7
Msa1244200 AT3G20130.2 29.050 179 114 4 318 487 280 454 1.19e-17 86.3
Msa1244200 AT2G25160.1 24.324 333 223 9 179 491 165 488 1.24e-17 86.3
Msa1244200 AT2G27690.1 23.902 410 254 14 104 480 76 460 1.43e-17 85.9
Msa1244200 AT1G13150.1 22.302 417 282 13 122 508 110 514 1.51e-17 85.9
Msa1244200 AT5G36220.2 26.349 315 197 12 192 491 32 326 1.68e-17 84.3
Msa1244200 AT4G12310.1 27.203 261 173 8 252 509 256 502 1.80e-17 85.9
Msa1244200 AT3G20130.1 29.050 179 114 4 318 487 308 482 1.90e-17 85.5
Msa1244200 AT1G64930.1 28.272 191 130 4 309 493 299 488 1.94e-17 85.5
Msa1244200 AT1G74110.1 20.904 531 347 18 18 502 24 527 2.16e-17 85.5
Msa1244200 AT3G20940.1 25.000 276 189 8 221 487 217 483 2.78e-17 85.1
Msa1244200 AT1G63710.1 22.273 440 294 12 104 510 82 506 2.86e-17 85.1
Msa1244200 AT2G24180.1 23.632 457 299 20 78 502 51 489 2.88e-17 85.1
Msa1244200 AT2G40890.1 21.656 471 302 14 50 480 16 459 2.95e-17 85.1
Msa1244200 AT3G26200.1 23.888 427 286 17 84 485 53 465 3.69e-17 84.7
Msa1244200 AT1G13080.2 21.975 314 212 8 192 484 50 351 4.84e-17 83.6
Msa1244200 AT3G20120.2 26.904 197 134 5 317 505 170 364 5.05e-17 83.2
Msa1244200 AT3G20120.3 26.904 197 134 5 317 505 170 364 5.05e-17 83.2
Msa1244200 AT3G20120.1 26.904 197 134 5 317 505 170 364 5.05e-17 83.2
Msa1244200 AT3G56630.1 23.198 444 291 19 99 510 72 497 5.07e-17 84.3
Msa1244200 AT5G24960.1 24.263 441 279 16 84 491 54 472 5.86e-17 84.0
Msa1244200 AT4G20240.1 24.416 385 252 16 75 437 49 416 6.80e-17 83.6
Msa1244200 AT5G10610.1 27.500 240 153 8 252 483 234 460 9.58e-17 83.2
Msa1244200 AT1G13080.1 21.963 428 293 12 84 484 56 469 1.06e-16 83.2
Msa1244200 AT2G46660.1 24.020 408 263 17 99 482 113 497 1.47e-16 82.8
Msa1244200 AT1G64940.1 26.904 197 139 4 306 498 298 493 1.62e-16 82.8
Msa1244200 AT4G12300.1 25.758 264 181 7 249 509 247 498 2.13e-16 82.4
Msa1244200 AT2G27000.1 21.991 432 299 13 82 486 59 479 3.36e-16 81.6
Msa1244200 AT4G15350.1 21.900 379 265 11 130 487 108 476 3.92e-16 81.6
Msa1244200 AT2G45550.1 26.277 274 181 9 238 499 231 495 4.31e-16 81.3
Msa1244200 AT3G26190.1 22.145 429 297 16 84 488 53 468 4.42e-16 81.3
Msa1244200 AT2G45970.1 21.924 447 290 14 104 510 82 509 5.14e-16 81.3
Msa1244200 AT5G04330.1 25.391 256 174 6 239 484 224 472 6.56e-16 80.9
Msa1244200 AT3G26160.1 22.038 422 281 17 78 466 45 451 6.84e-16 80.9
Msa1244200 AT5G25180.1 22.782 417 287 14 89 484 59 461 7.27e-16 80.5
Msa1244200 AT2G45570.1 25.175 286 189 10 238 507 231 507 7.43e-16 80.5
Msa1244200 AT3G20110.1 22.831 438 307 13 83 502 64 488 8.82e-16 80.5
Msa1244200 AT4G37410.1 22.970 431 286 18 75 480 47 456 1.26e-15 79.7
Msa1244200 AT1G13110.1 21.292 418 293 12 88 480 61 467 1.38e-15 79.7
Msa1244200 AT4G37310.1 23.206 418 279 14 104 493 77 480 1.42e-15 79.7
Msa1244200 AT5G42580.1 23.323 313 221 7 201 505 186 487 1.58e-15 79.7
Msa1244200 AT1G28430.1 24.291 247 168 5 249 487 245 480 1.71e-15 79.7
Msa1244200 AT4G00360.1 24.449 454 271 19 104 510 82 510 2.36e-15 79.3
Msa1244200 AT3G20100.1 24.898 245 170 5 249 487 246 482 2.63e-15 79.0
Msa1244200 AT4G37370.1 24.011 354 228 12 143 478 122 452 3.27e-15 78.6
Msa1244200 AT3G61040.1 22.857 455 301 15 64 483 24 463 3.78e-15 78.6
Msa1244200 AT1G74550.1 28.342 187 131 3 306 490 271 456 3.79e-15 78.2
Msa1244200 AT3G20960.1 23.750 320 216 9 177 487 78 378 5.63e-15 77.4
Msa1244200 AT1G33730.1 26.104 249 159 8 247 484 105 339 5.85e-15 77.0
Msa1244200 AT1G33730.2 26.104 249 159 8 247 484 105 339 5.85e-15 77.0
Msa1244200 AT3G03470.1 27.723 202 132 5 292 480 275 475 6.11e-15 77.8
Msa1244200 AT5G25900.1 25.806 248 167 5 239 484 247 479 7.66e-15 77.4
Msa1244200 AT1G01600.1 22.991 448 287 18 104 510 82 512 8.65e-15 77.4
Msa1244200 AT3G20960.2 23.750 320 216 9 177 487 181 481 8.86e-15 77.4
Msa1244200 AT2G12190.1 24.555 281 173 8 253 502 240 512 1.61e-14 76.6
Msa1244200 AT2G45580.2 26.923 182 131 2 304 484 142 322 1.95e-14 75.1
Msa1244200 AT1G64950.1 26.336 262 168 8 253 498 240 492 2.22e-14 75.9
Msa1244200 AT4G37330.1 24.219 384 238 17 124 483 101 455 2.29e-14 75.9
Msa1244200 AT2G45580.1 26.923 182 131 2 304 484 296 476 2.59e-14 75.9
Msa1244200 AT3G53300.1 20.920 435 303 16 79 486 48 468 3.15e-14 75.5
Msa1244200 AT2G42250.1 25.084 299 195 11 202 480 188 477 5.06e-14 75.1
Msa1244200 AT1G33720.4 26.033 242 161 7 247 484 116 343 5.31e-14 73.9
Msa1244200 AT1G33720.3 26.033 242 161 7 247 484 116 343 5.31e-14 73.9
Msa1244200 AT1G33720.5 26.033 242 161 7 247 484 116 343 5.31e-14 73.9
Msa1244200 AT4G37360.1 31.217 189 119 6 309 493 287 468 5.56e-14 74.7
Msa1244200 AT1G33720.1 26.033 242 161 7 247 484 248 475 5.83e-14 74.7
Msa1244200 AT4G12330.1 22.414 464 304 18 77 510 64 501 5.88e-14 74.7
Msa1244200 AT3G26150.1 22.222 423 291 18 89 486 60 469 9.69e-14 73.9
Msa1244200 AT2G32440.2 19.908 437 273 14 81 485 71 462 1.07e-13 73.9
Msa1244200 AT2G32440.1 19.908 437 273 14 81 485 71 462 1.07e-13 73.9
Msa1244200 AT4G13310.2 24.033 362 227 15 78 409 47 390 1.28e-13 73.2
Msa1244200 AT1G33720.2 25.391 256 170 7 247 484 116 368 1.62e-13 72.8
Msa1244200 AT3G20080.4 25.391 256 167 7 236 480 97 339 2.91e-13 72.0
Msa1244200 AT3G20080.5 25.391 256 167 7 236 480 97 339 2.91e-13 72.0
Msa1244200 AT3G20080.6 25.391 256 167 7 236 480 97 339 2.91e-13 72.0
Msa1244200 AT3G20080.3 25.391 256 167 7 236 480 97 339 2.91e-13 72.0
Msa1244200 AT5G42590.1 24.324 296 205 7 198 482 175 462 4.26e-13 72.0
Msa1244200 AT5G25130.1 21.281 437 302 15 90 503 60 477 4.85e-13 71.6
Msa1244200 AT5G06905.1 26.122 245 157 7 260 487 245 482 5.18e-13 71.6
Msa1244200 AT1G16410.1 23.000 400 261 15 139 502 133 521 9.57e-13 70.9
Msa1244200 AT1G05160.2 20.144 417 288 13 81 480 72 460 1.04e-12 70.9
Msa1244200 AT1G05160.1 20.144 417 288 13 81 480 72 460 1.04e-12 70.9
Msa1244200 AT3G50660.1 26.000 250 153 6 277 511 280 512 1.07e-12 70.9
Msa1244200 AT3G53280.1 22.145 429 291 18 83 484 52 464 1.89e-12 70.1
Msa1244200 AT3G19270.2 22.248 427 282 14 77 489 55 445 2.08e-12 69.7
Msa1244200 AT3G19270.1 22.406 424 279 14 77 486 55 442 2.24e-12 69.3
Msa1244200 AT1G74540.1 25.481 208 144 4 285 482 248 454 2.76e-12 69.3
Msa1244200 AT2G23220.1 25.758 264 170 8 239 496 247 490 3.08e-12 69.3
Msa1244200 AT2G29090.2 23.571 420 275 15 102 508 93 479 3.86e-12 68.9
Msa1244200 AT2G29090.1 23.571 420 275 15 102 508 93 479 3.86e-12 68.9
Msa1244200 AT3G26290.1 22.430 428 303 12 78 484 46 465 4.36e-12 68.9
Msa1244200 AT3G26290.2 22.430 428 303 12 78 484 59 478 5.48e-12 68.6
Msa1244200 AT5G61320.1 26.939 245 148 9 256 491 243 465 6.78e-12 68.2
Msa1244200 AT3G26180.2 22.111 199 151 3 295 490 144 341 3.22e-11 65.5
Msa1244200 AT3G26220.1 22.936 436 294 16 83 489 53 475 4.18e-11 65.9
Msa1244200 AT4G20240.2 23.120 359 237 16 75 411 49 390 5.18e-11 65.1
Msa1244200 AT1G55940.1 26.066 211 142 5 277 480 260 463 6.94e-11 65.1

Find 166 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCATCATGATTTGGATTT+TGG 0.086543 8_2:+31893815 None:intergenic
TAATTGCTACTATTCCTTTA+TGG 0.112978 8_2:-31895847 Msa1244200:CDS
TGGCCAAAACTTTGCCTTAT+TGG 0.137774 8_2:-31893037 Msa1244200:CDS
ATTCCTCCAGAGAACCTTTC+TGG 0.180535 8_2:+31893123 Msa1244180:three_prime_UTR
CTTGCACGTTCTTGCCATTC+AGG 0.181436 8_2:+31893865 None:intergenic
ATATGATGGAGAAGATATTT+TGG 0.209876 8_2:+31895938 None:intergenic
AACACTTGTTTGATTTGTTC+AGG 0.218844 8_2:+31894730 None:intergenic
AAGTGCTTCAATCTTGTTTC+GGG 0.220616 8_2:+31892510 Msa1244180:intron
AATTGCTACTATTCCTTTAT+GGG 0.243184 8_2:-31895846 Msa1244200:CDS
AAACAAGATTGAAGCACTTT+TGG 0.249940 8_2:-31892506 Msa1244200:three_prime_UTR
TGCATCTGATACCAGCTTAT+TGG 0.260225 8_2:+31892563 Msa1244180:intron
CCACTGCATCTTTGTTAGTT+TGG 0.268150 8_2:-31893912 Msa1244200:CDS
TACTACTTTGGCTTCCAATA+AGG 0.270800 8_2:+31893023 Msa1244180:three_prime_UTR
TAAGTGTTTGTGATAATTTC+TGG 0.276293 8_2:-31892720 Msa1244200:three_prime_UTR
GCCATCAATGATGATTTATT+AGG 0.288793 8_2:-31894054 Msa1244200:CDS
CGGATCTTAGCCCCGTGTTT+TGG 0.297729 8_2:+31892919 Msa1244180:three_prime_UTR
CTAGCAGAGAGCATCTTTCT+AGG 0.300146 8_2:+31892341 Msa1244180:intron
CACTTTCACCAGCTACCTTC+TGG 0.302879 8_2:-31895883 Msa1244200:CDS
GCCCTTCCCCTAGGGTTTCC+TGG 0.304738 8_2:-31892312 Msa1244200:three_prime_UTR
GGTATCAAATGGTTTGGATT+TGG 0.312604 8_2:+31895700 None:intergenic
AGTTTGGACAATGGTGTTAT+TGG 0.316922 8_2:-31893896 Msa1244200:CDS
TTCACCATGACTGTGATATA+TGG 0.320687 8_2:-31893170 Msa1244200:CDS
TGACTTAACCCATCATGATT+TGG 0.331413 8_2:+31893808 None:intergenic
TGTTTCCATACCGATACTTT+TGG 0.342478 8_2:-31893193 Msa1244200:CDS
TTTCATGACCTTGAATTTCA+AGG 0.352446 8_2:+31894010 None:intergenic
GAGGGAAAGGGATTGGCATT+TGG 0.353703 8_2:-31892789 Msa1244200:three_prime_UTR
ACCACAAGGAATTCAGCTTC+TGG 0.357033 8_2:+31895819 None:intergenic
GCCTAATAAATCATCATTGA+TGG 0.373911 8_2:+31894053 None:intergenic
ATTTGATCTTATAAGATTGC+AGG 0.376123 8_2:-31894308 Msa1244200:CDS
CAGCCGTGTTTACACTGTTT+CGG 0.382010 8_2:-31892180 Msa1244200:three_prime_UTR
GTTGGAGGTATCAAATGGTT+TGG 0.384202 8_2:+31895694 None:intergenic
GGGTCCGCGATGATCACTTT+TGG 0.384929 8_2:+31894751 None:intergenic
TTATTCCTGCAGGTAGTGAT+AGG 0.388666 8_2:+31893217 Msa1244180:three_prime_UTR
AGTCATAAGGAACACAAGTA+TGG 0.390121 8_2:-31895909 Msa1244200:exon
AAAGTGCTTCAATCTTGTTT+CGG 0.396476 8_2:+31892509 Msa1244180:intron
CACCAAACTGTCCGAAAATA+CGG 0.402573 8_2:-31895641 Msa1244200:intron
TTATGACTTTAGAGATATGA+TGG 0.408783 8_2:+31895924 None:intergenic
CGTTGGATTAGTAAGTTATG+AGG 0.413311 8_2:-31894650 Msa1244200:CDS
TGATCAGCTGTTAGTTGCTC+TGG 0.414249 8_2:-31892288 Msa1244200:three_prime_UTR
CTAAGAGCACAAGGTCTTCA+AGG 0.414544 8_2:-31895770 Msa1244200:CDS
TTAGTTGGTATTATTTAGTA+AGG 0.416431 8_2:-31892599 Msa1244200:three_prime_UTR
TCCATTTGCTAATCATATCA+TGG 0.418520 8_2:+31894452 None:intergenic
TACGATTGAATTCGACAATT+GGG 0.424248 8_2:-31892211 Msa1244200:three_prime_UTR
GGACAATGGTGTTATTGGCT+AGG 0.425719 8_2:-31893891 Msa1244200:CDS
TGTAAGCAATTCTACATTGC+AGG 0.427094 8_2:-31893943 Msa1244200:CDS
TAGGGTTTCGCCCTTCCCCT+AGG 0.429665 8_2:-31892321 Msa1244200:three_prime_UTR
GCGATTTCTAGAACAGCATT+TGG 0.431431 8_2:-31894358 Msa1244200:CDS
ATACGATTGAATTCGACAAT+TGG 0.431769 8_2:-31892212 Msa1244200:three_prime_UTR
TTTAAACCAGAAAGGTTCTC+TGG 0.435887 8_2:-31893129 Msa1244200:CDS
GAGATTTATGATTTAGTCGA+GGG 0.436844 8_2:-31894117 Msa1244200:CDS
ATACACGAAGTCCGATGAAA+TGG 0.438094 8_2:-31894270 Msa1244200:intron
CCTTTCATTCAAAACTTGAC+TGG 0.439251 8_2:-31894385 Msa1244200:CDS
TACCTACAAGTTCCAACAAA+AGG 0.441178 8_2:-31894158 Msa1244200:CDS
AATGGAATCGAACTTTGGTT+TGG 0.442194 8_2:+31894687 None:intergenic
AGCTTCTGGAAAGCCCATAA+AGG 0.443503 8_2:+31895833 None:intergenic
ATTGCTAAGTGTTTGTTCGT+TGG 0.444747 8_2:-31894667 Msa1244200:CDS
CTTCCAATAAGGCAAAGTTT+TGG 0.453837 8_2:+31893034 Msa1244180:three_prime_UTR
AATTTATCAATGTGAAATGC+AGG 0.455594 8_2:+31894592 None:intergenic
ATCATATCTCTAAAGTCATA+AGG 0.456844 8_2:-31895922 Msa1244200:five_prime_UTR
GATGGCTTCTCCATTGTCCA+TGG 0.458759 8_2:+31894071 None:intergenic
TATACAAAGTAAGATGGAAA+AGG 0.465890 8_2:+31892686 Msa1244180:intron
GTTCTAGGACCCCATCCAAA+TGG 0.468767 8_2:+31893066 Msa1244180:three_prime_UTR
TCACCATGACTGTGATATAT+GGG 0.470077 8_2:-31893169 Msa1244200:CDS
TCAAATAACCTTGAAATTCA+AGG 0.470347 8_2:-31894018 Msa1244200:CDS
TAGTATTGCATGTGTATGTT+AGG 0.476192 8_2:-31892833 Msa1244200:three_prime_UTR
AATGATATGATGTACAAATC+CGG 0.478746 8_2:+31892401 Msa1244180:intron
GAAGACATCAAACAATTGTA+TGG 0.482962 8_2:+31892460 Msa1244180:intron
TAGCAGAGAGCATCTTTCTA+GGG 0.484708 8_2:+31892342 Msa1244180:intron
ACACTTGTTTGATTTGTTCA+GGG 0.486748 8_2:+31894731 None:intergenic
CAAAAGAGTTTAAACCAGAA+AGG 0.488467 8_2:-31893137 Msa1244200:CDS
AACCAAAATCCAAATCATGA+TGG 0.488741 8_2:-31893817 Msa1244200:CDS
CAAAGACATCCATACAGAAA+AGG 0.491499 8_2:+31892368 Msa1244180:intron
ATGGAAACATTTATTCCTGC+AGG 0.491928 8_2:+31893207 Msa1244180:three_prime_UTR
TTTGGCAGCAGCTATGTAGC+AGG 0.491976 8_2:-31894340 Msa1244200:CDS
TTGATTAGTACTTGGTTGGT+TGG 0.492966 8_2:-31892766 Msa1244200:three_prime_UTR
CTAGAAAGATGCTCTCTGCT+AGG 0.493439 8_2:-31892340 Msa1244200:three_prime_UTR
GCCAGGAAACCCTAGGGGAA+GGG 0.493682 8_2:+31892311 Msa1244180:intron
TTAGCAATGGAATCGAACTT+TGG 0.494174 8_2:+31894682 None:intergenic
ATAGAATATACAAAGTAAGA+TGG 0.494392 8_2:+31892680 Msa1244180:intron
AACAAGAGAGGGAAAGGGAT+TGG 0.495412 8_2:-31892796 Msa1244200:three_prime_UTR
TATTGGCTAGGTTTCCTGAA+TGG 0.499274 8_2:-31893879 Msa1244200:CDS
TTCTAGGACCCCATCCAAAT+GGG 0.504793 8_2:+31893067 Msa1244180:three_prime_UTR
GGAATTGCAAAGGCCACAAA+AGG 0.506652 8_2:-31893105 Msa1244200:CDS
GTAAGAATCCAGAAGGTAGC+TGG 0.508985 8_2:+31895875 None:intergenic
AATCGTATAACATACATTTG+AGG 0.511881 8_2:+31892227 Msa1244180:intron
CTTTCTTTGCAGCCAAAACA+CGG 0.514214 8_2:-31892931 Msa1244200:CDS
ACATCGTTGGAGGTATCAAA+TGG 0.514681 8_2:+31895689 None:intergenic
GCCATGATATGATTAGCAAA+TGG 0.516109 8_2:-31894453 Msa1244200:CDS
TGATTTATTAGGCTTACTGA+TGG 0.517189 8_2:-31894043 Msa1244200:CDS
CTGTTGGTGGATATAATCTC+AGG 0.519172 8_2:+31893283 Msa1244180:three_prime_UTR
AGGGTTTCGCCCTTCCCCTA+GGG 0.522263 8_2:-31892320 Msa1244200:three_prime_UTR
AAGTAGTGACAATACTACTT+TGG 0.522266 8_2:+31893011 Msa1244180:three_prime_UTR
TTGGTTGGTTGGTCAAGACT+AGG 0.523367 8_2:-31892755 Msa1244200:three_prime_UTR
TAGAAAGATGCTCTCTGCTA+GGG 0.526241 8_2:-31892339 Msa1244200:three_prime_UTR
AAGTTATGAGGGTGACGAAT+GGG 0.526252 8_2:-31894638 Msa1244200:CDS
TCTCAGAGAGTTAAGTTACA+AGG 0.526310 8_2:+31892650 Msa1244180:intron
GCATTTGGTTGATTAGTACT+TGG 0.526595 8_2:-31892774 Msa1244200:three_prime_UTR
CTGATCAGCCAGGAAACCCT+AGG 0.528111 8_2:+31892304 Msa1244180:intron
TTTCTTTGCAGCCAAAACAC+GGG 0.530148 8_2:-31892930 Msa1244200:CDS
GTTGGATTAGTAAGTTATGA+GGG 0.532684 8_2:-31894649 Msa1244200:CDS
GTGAACCAAAAGTATCGGTA+TGG 0.532886 8_2:+31893188 Msa1244180:three_prime_UTR
TTTGATCTTATAAGATTGCA+GGG 0.533158 8_2:-31894307 Msa1244200:CDS
ATTTATCAATGTGAAATGCA+GGG 0.533762 8_2:+31894593 None:intergenic
GATCTGTGGCGCAACATCGT+TGG 0.535279 8_2:+31895676 None:intergenic
TCTTTGTCTTACCATTTCAT+CGG 0.535987 8_2:+31894259 None:intergenic
CATGAAAAGAGTAAGACAGC+TGG 0.540594 8_2:-31893994 Msa1244200:CDS
GAATAAAACAAGAGAGGGAA+AGG 0.541132 8_2:-31892802 Msa1244200:three_prime_UTR
AGAGATTTATGATTTAGTCG+AGG 0.542148 8_2:-31894118 Msa1244200:CDS
ACCAAAATCCAAATCATGAT+GGG 0.542219 8_2:-31893816 Msa1244200:CDS
TCCAGAAGCTGAATTCCTTG+TGG 0.542304 8_2:-31895820 Msa1244200:CDS
CGAACTAAGAAAACTGTTGG+TGG 0.543941 8_2:+31893270 Msa1244180:three_prime_UTR
TTGGTTGATTAGTACTTGGT+TGG 0.545897 8_2:-31892770 Msa1244200:three_prime_UTR
CAACTAACAGCTGATCAGCC+AGG 0.548592 8_2:+31892294 Msa1244180:intron
GCAAATGCCAACCAATAAGC+TGG 0.551839 8_2:-31892574 Msa1244200:three_prime_UTR
ATGATGTTAACTGTATGAAT+AGG 0.553956 8_2:-31892483 Msa1244200:three_prime_UTR
AGCCAGGAAACCCTAGGGGA+AGG 0.556455 8_2:+31892310 Msa1244180:intron
CGAGAGAAAGCCATGGACAA+TGG 0.556873 8_2:-31894081 Msa1244200:CDS
CTGTGGCGCAACATCGTTGG+AGG 0.565671 8_2:+31895679 None:intergenic
TAATTTATTGATAAAACTCA+CGG 0.567068 8_2:+31892619 Msa1244180:intron
TTATTTACAGAATATGCTAC+CGG 0.570816 8_2:-31894491 Msa1244200:intron
ATCTTTGTTAGTTTGGACAA+TGG 0.573101 8_2:-31893905 Msa1244200:CDS
AAGTTCCAACAAAAGGATGA+AGG 0.573312 8_2:-31894151 Msa1244200:CDS
GTGGTTGAGACCAAAGAGGT+TGG 0.578237 8_2:-31895801 Msa1244200:CDS
AACGAACAAACACTTAGCAA+TGG 0.579121 8_2:+31894669 None:intergenic
GCTCGAACTAAGAAAACTGT+TGG 0.579739 8_2:+31893267 Msa1244180:three_prime_UTR
CTGAATGGCAAGAACGTGCA+AGG 0.583115 8_2:-31893864 Msa1244200:CDS
TCTGATACCAGCTTATTGGT+TGG 0.588070 8_2:+31892567 Msa1244180:intron
TCATGGTGAACCAAAAGTAT+CGG 0.588312 8_2:+31893183 Msa1244180:three_prime_UTR
TGATATGATTAGCAAATGGA+AGG 0.592903 8_2:-31894449 Msa1244200:CDS
TGGGGTCCTAGAACATGCAT+TGG 0.593187 8_2:-31893057 Msa1244200:CDS
TAAGTTATGAGGGTGACGAA+TGG 0.597722 8_2:-31894639 Msa1244200:CDS
CCGTGTTTACACTGTTTCGG+TGG 0.599254 8_2:-31892177 Msa1244200:three_prime_UTR
TGATCAGCCAGGAAACCCTA+GGG 0.600388 8_2:+31892305 Msa1244180:intron
ATCACAGAGATGAGGTGAGG+AGG 0.603195 8_2:+31892255 Msa1244180:intron
TGGCTGCTTTGAATAAATGC+CGG 0.607297 8_2:+31894472 None:intergenic
AATAAAACAAGAGAGGGAAA+GGG 0.608790 8_2:-31892801 Msa1244200:three_prime_UTR
AAGCCGAATAAAACAAGAGA+GGG 0.612827 8_2:-31892807 Msa1244200:three_prime_UTR
CCACCGAAACAGTGTAAACA+CGG 0.613825 8_2:+31892177 Msa1244180:intron
CCTTGTGGTTGAGACCAAAG+AGG 0.614349 8_2:-31895805 Msa1244200:CDS
GGAAACCTATCACTACCTGC+AGG 0.614488 8_2:-31893222 Msa1244200:CDS
AATCATGTGAGATTGATGTC+CGG 0.615391 8_2:-31894408 Msa1244200:CDS
CTGTTTCGGTGGTGTTACGA+AGG 0.616290 8_2:-31892166 Msa1244200:three_prime_UTR
TGCAAAGAAAGGATAGCAGT+GGG 0.620612 8_2:+31892943 Msa1244180:three_prime_UTR
CACCCCATATATCACAGTCA+TGG 0.625790 8_2:+31893166 Msa1244180:three_prime_UTR
CATGCTTATAGTCTGCAGAA+AGG 0.626291 8_2:+31892968 Msa1244180:three_prime_UTR
CTGCAAAGAAAGGATAGCAG+TGG 0.631280 8_2:+31892942 Msa1244180:three_prime_UTR
AAACCAGAAAGGTTCTCTGG+AGG 0.634600 8_2:-31893126 Msa1244200:CDS
CCAAACTAACAAAGATGCAG+TGG 0.635378 8_2:+31893912 None:intergenic
TTCTTTGCAGCCAAAACACG+GGG 0.635892 8_2:-31892929 Msa1244200:CDS
TTGGCAGCAGCTATGTAGCA+GGG 0.636138 8_2:-31894339 Msa1244200:CDS
GAAAAGCTTCTAAGAGCACA+AGG 0.638368 8_2:-31895779 Msa1244200:CDS
TATGACTGTAAGAATCCAGA+AGG 0.644150 8_2:+31895868 None:intergenic
CCTCTTTGGTCTCAACCACA+AGG 0.644752 8_2:+31895805 None:intergenic
GTTCTCTGGAGGAATTGCAA+AGG 0.650068 8_2:-31893115 Msa1244200:CDS
AGCAGAGAGCATCTTTCTAG+GGG 0.653283 8_2:+31892343 Msa1244180:intron
TAAAATACGAGAGAAAGCCA+TGG 0.657399 8_2:-31894088 Msa1244200:CDS
CAAGCCGAATAAAACAAGAG+AGG 0.664051 8_2:-31892808 Msa1244200:three_prime_UTR
CAGGACCTCATATAAAACCA+TGG 0.671962 8_2:+31893302 Msa1244180:three_prime_UTR
CATAAGGAACACAAGTATGG+AGG 0.672517 8_2:-31895906 Msa1244200:exon
TTGATCTTATAAGATTGCAG+GGG 0.692148 8_2:-31894306 Msa1244200:CDS
AGGTCACTATCACAGAGATG+AGG 0.693603 8_2:+31892247 Msa1244180:intron
CACCATGACTGTGATATATG+GGG 0.697286 8_2:-31893168 Msa1244200:CDS
ACTATCACAGAGATGAGGTG+AGG 0.698142 8_2:+31892252 Msa1244180:intron
TGTACGAATGAAAAGATCTG+TGG 0.746082 8_2:+31895662 None:intergenic
GATCAGCCAGGAAACCCTAG+GGG 0.757604 8_2:+31892306 Msa1244180:intron
AATACCAAAAGTGATCATCG+CGG 0.799523 8_2:-31894755 Msa1244200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAGATTAAAACTAAATTAA+TGG + chr8_2:31892629-31892648 Msa1244180:intron 10.0%
!!! TTAATTTAGTTTTAATCTAA+TGG - chr8_2:31892629-31892648 Msa1244200:three_prime_UTR 10.0%
!!! AAATTAGAATAGATAATTTT+CGG + chr8_2:31892749-31892768 Msa1244180:intron 10.0%
!!! ATCTATTCTAATTTTTTTTA+AGG - chr8_2:31892755-31892774 Msa1244200:three_prime_UTR 10.0%
!!! TTTTTTAACATAAAATATGT+TGG - chr8_2:31894717-31894736 Msa1244200:CDS 10.0%
!!! TTTTTAACATAAAATATGTT+GGG - chr8_2:31894718-31894737 Msa1244200:CDS 10.0%
!!! GTAAAAAAAAATTTAAAACT+TGG - chr8_2:31894920-31894939 Msa1244200:intron 10.0%
!!! ATAAATATATACCGTATTTT+CGG + chr8_2:31892536-31892555 Msa1244180:intron 15.0%
!! AAAATACGGTATATATTTAT+AGG - chr8_2:31892536-31892555 Msa1244200:three_prime_UTR 15.0%
!! TAAATAATGATGACTAAATT+TGG + chr8_2:31894515-31894534 None:intergenic 15.0%
!!! TTTTAACATAAAATATGTTG+GGG - chr8_2:31894719-31894738 Msa1244200:CDS 15.0%
!!! TCAAAAGTTGATATATTTAT+AGG - chr8_2:31894776-31894795 Msa1244200:CDS 15.0%
!! TATCAAAAAATTGTTACATT+TGG - chr8_2:31895283-31895302 Msa1244200:intron 15.0%
!! TAATTTATTGATAAAACTCA+CGG + chr8_2:31895547-31895566 None:intergenic 15.0%
!!! AGTTTTATCAATAAATTAGT+TGG - chr8_2:31895549-31895568 Msa1244200:intron 15.0%
!! ATTTATAGGCATATCATATA+TGG - chr8_2:31892550-31892569 Msa1244200:three_prime_UTR 20.0%
!! TTTATAGGCATATCATATAT+GGG - chr8_2:31892551-31892570 Msa1244200:three_prime_UTR 20.0%
!! TTAAAACTAAATTAATGGCT+AGG + chr8_2:31892624-31892643 Msa1244180:intron 20.0%
!!! ATAAACAAGGAATTTTTCTT+TGG + chr8_2:31892827-31892846 Msa1244180:intron 20.0%
!! GAATTGGAAAAAAAAATCAA+TGG + chr8_2:31892919-31892938 Msa1244180:three_prime_UTR 20.0%
!! CAAGTGATGTTAATTATTTA+GGG + chr8_2:31893961-31893980 None:intergenic 20.0%
!! TCAAGTGATGTTAATTATTT+AGG + chr8_2:31893962-31893981 None:intergenic 20.0%
!! TTGATATATAATGTGTTTCT+AGG - chr8_2:31893978-31893997 Msa1244200:CDS 20.0%
!! TAGTCATCATTATTTAACAA+TGG - chr8_2:31894519-31894538 Msa1244200:intron 20.0%
!!! GATACCTTTAAGATATATTA+AGG - chr8_2:31894589-31894608 Msa1244200:CDS 20.0%
!!! AGTTATAAGAAAGTTTTTGT+TGG - chr8_2:31894747-31894766 Msa1244200:CDS 20.0%
!!! GTTATAAGAAAGTTTTTGTT+GGG - chr8_2:31894748-31894767 Msa1244200:CDS 20.0%
!! ATAGAATATACAAAGTAAGA+TGG + chr8_2:31895486-31895505 None:intergenic 20.0%
!!! TTAGTTGGTATTATTTAGTA+AGG - chr8_2:31895564-31895583 Msa1244200:intron 20.0%
!!! ATATGATGGAGAAGATATTT+TGG + chr8_2:31892228-31892247 Msa1244180:intron 25.0%
!! TTATGACTTTAGAGATATGA+TGG + chr8_2:31892242-31892261 Msa1244180:intron 25.0%
!!! ATCATATCTCTAAAGTCATA+AGG - chr8_2:31892241-31892260 Msa1244200:three_prime_UTR 25.0%
! TAATTGCTACTATTCCTTTA+TGG - chr8_2:31892316-31892335 Msa1244200:three_prime_UTR 25.0%
! AATTGCTACTATTCCTTTAT+GGG - chr8_2:31892317-31892336 Msa1244200:three_prime_UTR 25.0%
!!! TCAAATTTAATTTGACACCT+TGG + chr8_2:31892593-31892612 Msa1244180:intron 25.0%
! TAATTTATTCTTTCTCCTCT+TGG - chr8_2:31892712-31892731 Msa1244200:three_prime_UTR 25.0%
! CTTTGGTTAAAAAAAAGCAA+AGG + chr8_2:31892810-31892829 Msa1244180:intron 25.0%
! AAAAAAAATCAATGGCTTCA+AGG + chr8_2:31892911-31892930 Msa1244180:three_prime_UTR 25.0%
! ATAAACTATGCTGAGTTAAT+TGG - chr8_2:31893092-31893111 Msa1244200:CDS 25.0%
!!! TACTTCATATCGATTTGATA+TGG + chr8_2:31893231-31893250 Msa1244180:three_prime_UTR 25.0%
! TTATTAGCAATTGTTCCAAA+AGG + chr8_2:31893345-31893364 Msa1244180:three_prime_UTR 25.0%
! CTAATAATTATGTGATGTGT+AGG - chr8_2:31893358-31893377 Msa1244200:intron 25.0%
! ATTTATCAATGTGAAATGCA+GGG + chr8_2:31893573-31893592 None:intergenic 25.0%
! AATTTATCAATGTGAAATGC+AGG + chr8_2:31893574-31893593 None:intergenic 25.0%
! ACATTGATAAATTGAGAGTA+AGG - chr8_2:31893581-31893600 Msa1244200:intron 25.0%
! GCATATTCTGTAAATAAGTT+AGG + chr8_2:31893669-31893688 None:intergenic 25.0%
! TTATTTACAGAATATGCTAC+CGG - chr8_2:31893672-31893691 Msa1244200:intron 25.0%
! ATTTGATCTTATAAGATTGC+AGG - chr8_2:31893855-31893874 Msa1244200:CDS 25.0%
! TTTGATCTTATAAGATTGCA+GGG - chr8_2:31893856-31893875 Msa1244200:CDS 25.0%
! TCAAATAACCTTGAAATTCA+AGG - chr8_2:31894145-31894164 Msa1244200:CDS 25.0%
! ATGATGACTAAATTTGGTAA+CGG + chr8_2:31894509-31894528 None:intergenic 25.0%
! GAGACCTTAATATATCTTAA+AGG + chr8_2:31894596-31894615 None:intergenic 25.0%
! TATACATGATAAGTACAACA+TGG + chr8_2:31894649-31894668 None:intergenic 25.0%
! GTATAAGTTAGCAACAAAAA+AGG + chr8_2:31894818-31894837 None:intergenic 25.0%
!!! TACCATAACATTTTTTCCAT+AGG - chr8_2:31894835-31894854 Msa1244200:intron 25.0%
! TAAGTGTTTGTGATAATTTC+TGG - chr8_2:31895443-31895462 Msa1244200:intron 25.0%
! TATACAAAGTAAGATGGAAA+AGG + chr8_2:31895480-31895499 None:intergenic 25.0%
! ATGATGTTAACTGTATGAAT+AGG - chr8_2:31895680-31895699 Msa1244200:CDS 25.0%
! GAAAAAATGCAATTCAAATC+CGG - chr8_2:31895743-31895762 Msa1244200:CDS 25.0%
! AATGATATGATGTACAAATC+CGG + chr8_2:31895765-31895784 None:intergenic 25.0%
! AATCGTATAACATACATTTG+AGG + chr8_2:31895939-31895958 None:intergenic 25.0%
CTAAATTAATGGCTAGGATT+TGG + chr8_2:31892618-31892637 Msa1244180:intron 30.0%
GTTATTTGATCAAACATGTG+AGG + chr8_2:31892672-31892691 Msa1244180:intron 30.0%
!!! ATATGTAGACCTTTTTTGCT+GGG + chr8_2:31892850-31892869 Msa1244180:intron 30.0%
!!! AATATGTAGACCTTTTTTGC+TGG + chr8_2:31892851-31892870 Msa1244180:intron 30.0%
TGTATTATATTAGAGAGTCG+TGG + chr8_2:31892886-31892905 Msa1244180:intron 30.0%
ACTTGTGGTTAAATAGGAAT+TGG + chr8_2:31892935-31892954 Msa1244180:three_prime_UTR 30.0%
ATTCCTATTTAACCACAAGT+TGG - chr8_2:31892935-31892954 Msa1244200:CDS 30.0%
GCTTGAAATTTGAACTTTGA+CGG - chr8_2:31893018-31893037 Msa1244200:CDS 30.0%
GTTAATTGGAGTAATGAAAG+AGG - chr8_2:31893106-31893125 Msa1244200:CDS 30.0%
!!! TTTATTTTACCAACCATCGT+TGG + chr8_2:31893177-31893196 Msa1244180:three_prime_UTR 30.0%
!! TTCATATCGATTTGATATGG+TGG + chr8_2:31893228-31893247 Msa1244180:three_prime_UTR 30.0%
TTGCTTAGTTGGAATATGTT+TGG - chr8_2:31893296-31893315 Msa1244200:CDS 30.0%
TTAGTTGGAATATGTTTGGT+AGG - chr8_2:31893300-31893319 Msa1244200:CDS 30.0%
!! TAGGCAAGAGTTCATTTTTA+TGG - chr8_2:31893377-31893396 Msa1244200:intron 30.0%
!! AGGCAAGAGTTCATTTTTAT+GGG - chr8_2:31893378-31893397 Msa1244200:intron 30.0%
!! AAGAGTTCATTTTTATGGGA+AGG - chr8_2:31893382-31893401 Msa1244200:intron 30.0%
!! ACACTTGTTTGATTTGTTCA+GGG + chr8_2:31893435-31893454 None:intergenic 30.0%
!! AACACTTGTTTGATTTGTTC+AGG + chr8_2:31893436-31893455 None:intergenic 30.0%
!! GTTGGATTAGTAAGTTATGA+GGG - chr8_2:31893514-31893533 Msa1244200:intron 30.0%
! TCCATTTGCTAATCATATCA+TGG + chr8_2:31893714-31893733 None:intergenic 30.0%
TGATATGATTAGCAAATGGA+AGG - chr8_2:31893714-31893733 Msa1244200:intron 30.0%
TTGATCTTATAAGATTGCAG+GGG - chr8_2:31893857-31893876 Msa1244200:CDS 30.0%
TCTTTGTCTTACCATTTCAT+CGG + chr8_2:31893907-31893926 None:intergenic 30.0%
AGAGATTTATGATTTAGTCG+AGG - chr8_2:31894045-31894064 Msa1244200:CDS 30.0%
GAGATTTATGATTTAGTCGA+GGG - chr8_2:31894046-31894065 Msa1244200:CDS 30.0%
GCCATCAATGATGATTTATT+AGG - chr8_2:31894109-31894128 Msa1244200:CDS 30.0%
GCCTAATAAATCATCATTGA+TGG + chr8_2:31894113-31894132 None:intergenic 30.0%
TGATTTATTAGGCTTACTGA+TGG - chr8_2:31894120-31894139 Msa1244200:CDS 30.0%
TTTCATGACCTTGAATTTCA+AGG + chr8_2:31894156-31894175 None:intergenic 30.0%
! ATCTTTGTTAGTTTGGACAA+TGG - chr8_2:31894258-31894277 Msa1244200:intron 30.0%
! CAAGAAGTTTTGCAAGTTTT+TGG - chr8_2:31894322-31894341 Msa1244200:CDS 30.0%
AACCAAAATCCAAATCATGA+TGG - chr8_2:31894346-31894365 Msa1244200:CDS 30.0%
ACCAAAATCCAAATCATGAT+GGG - chr8_2:31894347-31894366 Msa1244200:CDS 30.0%
ATGTCATAAAAAAAGTCACG+TGG + chr8_2:31894563-31894582 None:intergenic 30.0%
!!! ACGTGACTTTTTTTATGACA+TGG - chr8_2:31894562-31894581 Msa1244200:intron 30.0%
ATATATTAAGGTCTCCACAA+TGG - chr8_2:31894601-31894620 Msa1244200:CDS 30.0%
AACATAAAATATGTTGGGGA+CGG - chr8_2:31894723-31894742 Msa1244200:CDS 30.0%
CACCTATGGAAAAAATGTTA+TGG + chr8_2:31894840-31894859 None:intergenic 30.0%
CAAAAGAGTTTAAACCAGAA+AGG - chr8_2:31895026-31895045 Msa1244200:intron 30.0%
! AAATGAAACTTGACCTTTTG+TGG + chr8_2:31895074-31895093 None:intergenic 30.0%
!! CAAGTTTCATTTTTCCCATT+TGG - chr8_2:31895082-31895101 Msa1244200:intron 30.0%
!! TTTCATTTTTCCCATTTGGA+TGG - chr8_2:31895086-31895105 Msa1244200:intron 30.0%
!! TTCATTTTTCCCATTTGGAT+GGG - chr8_2:31895087-31895106 Msa1244200:intron 30.0%
AAGTAGTGACAATACTACTT+TGG + chr8_2:31895155-31895174 None:intergenic 30.0%
! GATATTACAGTTTTTGCAGA+CGG + chr8_2:31895267-31895286 None:intergenic 30.0%
TAGTATTGCATGTGTATGTT+AGG - chr8_2:31895330-31895349 Msa1244200:intron 30.0%
!!! TTTCCCTCTCTTGTTTTATT+CGG + chr8_2:31895362-31895381 None:intergenic 30.0%
AATAAAACAAGAGAGGGAAA+GGG - chr8_2:31895362-31895381 Msa1244200:intron 30.0%
! AAAGTGCTTCAATCTTGTTT+CGG + chr8_2:31895657-31895676 None:intergenic 30.0%
!! AAACAAGATTGAAGCACTTT+TGG - chr8_2:31895657-31895676 Msa1244200:CDS 30.0%
GAAGACATCAAACAATTGTA+TGG + chr8_2:31895706-31895725 None:intergenic 30.0%
!!! GCATTTTTTCTCAGTTTCAT+AGG + chr8_2:31895733-31895752 None:intergenic 30.0%
ATACGATTGAATTCGACAAT+TGG - chr8_2:31895951-31895970 Msa1244200:five_prime_UTR 30.0%
TACGATTGAATTCGACAATT+GGG - chr8_2:31895952-31895971 Msa1244200:five_prime_UTR 30.0%
AGTCATAAGGAACACAAGTA+TGG - chr8_2:31892254-31892273 Msa1244200:three_prime_UTR 35.0%
TATGACTGTAAGAATCCAGA+AGG + chr8_2:31892298-31892317 Msa1244180:intron 35.0%
! GGTATCAAATGGTTTGGATT+TGG + chr8_2:31892466-31892485 Msa1244180:intron 35.0%
TGTACGAATGAAAAGATCTG+TGG + chr8_2:31892504-31892523 Msa1244180:intron 35.0%
GATAAGATCAAATGACACCA+AGG - chr8_2:31892573-31892592 Msa1244200:three_prime_UTR 35.0%
GTGAGGACTTAATGAATTGA+TGG + chr8_2:31892655-31892674 Msa1244180:intron 35.0%
!!! CTTTTTTGCTGGGATAAACA+AGG + chr8_2:31892840-31892859 Msa1244180:intron 35.0%
CTTGTTTATCCCAGCAAAAA+AGG - chr8_2:31892838-31892857 Msa1244200:three_prime_UTR 35.0%
CTCAGCATAGTTTATCTTTG+TGG + chr8_2:31893087-31893106 Msa1244180:three_prime_UTR 35.0%
AGAGATATAGTATCCAACGA+TGG - chr8_2:31893161-31893180 Msa1244200:CDS 35.0%
ATATAGTATCCAACGATGGT+TGG - chr8_2:31893165-31893184 Msa1244200:CDS 35.0%
ATGAAGTAACCAACGATGAT+TGG - chr8_2:31893243-31893262 Msa1244200:CDS 35.0%
TGAAGTAACCAACGATGATT+GGG - chr8_2:31893244-31893263 Msa1244200:CDS 35.0%
AATACCAAAAGTGATCATCG+CGG - chr8_2:31893408-31893427 Msa1244200:intron 35.0%
AATGGAATCGAACTTTGGTT+TGG + chr8_2:31893479-31893498 None:intergenic 35.0%
TTAGCAATGGAATCGAACTT+TGG + chr8_2:31893484-31893503 None:intergenic 35.0%
AACGAACAAACACTTAGCAA+TGG + chr8_2:31893497-31893516 None:intergenic 35.0%
ATTGCTAAGTGTTTGTTCGT+TGG - chr8_2:31893496-31893515 Msa1244200:intron 35.0%
!! CGTTGGATTAGTAAGTTATG+AGG - chr8_2:31893513-31893532 Msa1244200:intron 35.0%
GCCATGATATGATTAGCAAA+TGG - chr8_2:31893710-31893729 Msa1244200:intron 35.0%
AATCATGTGAGATTGATGTC+CGG - chr8_2:31893755-31893774 Msa1244200:intron 35.0%
!!! TCAAGTTTTGAATGAAAGGC+CGG + chr8_2:31893777-31893796 None:intergenic 35.0%
!!! CCAGTCAAGTTTTGAATGAA+AGG + chr8_2:31893781-31893800 None:intergenic 35.0%
CCTTTCATTCAAAACTTGAC+TGG - chr8_2:31893778-31893797 Msa1244200:intron 35.0%
TACCTACAAGTTCCAACAAA+AGG - chr8_2:31894005-31894024 Msa1244200:CDS 35.0%
! ATCCTTTTGTTGGAACTTGT+AGG + chr8_2:31894010-31894029 None:intergenic 35.0%
AAGTTCCAACAAAAGGATGA+AGG - chr8_2:31894012-31894031 Msa1244200:CDS 35.0%
! GATTTCCTTCATCCTTTTGT+TGG + chr8_2:31894020-31894039 None:intergenic 35.0%
TAAAATACGAGAGAAAGCCA+TGG - chr8_2:31894075-31894094 Msa1244200:CDS 35.0%
TGTAAGCAATTCTACATTGC+AGG - chr8_2:31894220-31894239 Msa1244200:intron 35.0%
!! AGTTTGGACAATGGTGTTAT+TGG - chr8_2:31894267-31894286 Msa1244200:intron 35.0%
!! ACCCATCATGATTTGGATTT+TGG + chr8_2:31894351-31894370 None:intergenic 35.0%
TGACTTAACCCATCATGATT+TGG + chr8_2:31894358-31894377 None:intergenic 35.0%
! TTGTTGATATTGTGCCATTG+TGG + chr8_2:31894618-31894637 None:intergenic 35.0%
!!! ATTTTTTCCATAGGTGACCA+TGG - chr8_2:31894844-31894863 Msa1244200:intron 35.0%
TATAAAACCATGGTCACCTA+TGG + chr8_2:31894854-31894873 None:intergenic 35.0%
ATGGAAACATTTATTCCTGC+AGG + chr8_2:31894959-31894978 None:intergenic 35.0%
! TGTTTCCATACCGATACTTT+TGG - chr8_2:31894970-31894989 Msa1244200:intron 35.0%
! TCATGGTGAACCAAAAGTAT+CGG + chr8_2:31894983-31895002 None:intergenic 35.0%
TTCACCATGACTGTGATATA+TGG - chr8_2:31894993-31895012 Msa1244200:intron 35.0%
TCACCATGACTGTGATATAT+GGG - chr8_2:31894994-31895013 Msa1244200:intron 35.0%
TTTAAACCAGAAAGGTTCTC+TGG - chr8_2:31895034-31895053 Msa1244200:intron 35.0%
!! TCATTTTTCCCATTTGGATG+GGG - chr8_2:31895088-31895107 Msa1244200:intron 35.0%
! CTTCCAATAAGGCAAAGTTT+TGG + chr8_2:31895132-31895151 None:intergenic 35.0%
! TACTACTTTGGCTTCCAATA+AGG + chr8_2:31895143-31895162 None:intergenic 35.0%
AAGCCGAATAAAACAAGAGA+GGG - chr8_2:31895356-31895375 Msa1244200:intron 35.0%
GAATAAAACAAGAGAGGGAA+AGG - chr8_2:31895361-31895380 Msa1244200:intron 35.0%
GCATTTGGTTGATTAGTACT+TGG - chr8_2:31895389-31895408 Msa1244200:intron 35.0%
TTGGTTGATTAGTACTTGGT+TGG - chr8_2:31895393-31895412 Msa1244200:intron 35.0%
TTGATTAGTACTTGGTTGGT+TGG - chr8_2:31895397-31895416 Msa1244200:intron 35.0%
TCTCAGAGAGTTAAGTTACA+AGG + chr8_2:31895516-31895535 None:intergenic 35.0%
! AAGTGCTTCAATCTTGTTTC+GGG + chr8_2:31895656-31895675 None:intergenic 35.0%
! ACAAGTTCTCCTTTTCTGTA+TGG - chr8_2:31895786-31895805 Msa1244200:CDS 35.0%
CAAAGACATCCATACAGAAA+AGG + chr8_2:31895798-31895817 None:intergenic 35.0%
CATAAGGAACACAAGTATGG+AGG - chr8_2:31892257-31892276 Msa1244200:three_prime_UTR 40.0%
! AGAAGCTTTTCCAACCTCTT+TGG + chr8_2:31892375-31892394 Msa1244180:intron 40.0%
! GAAAAGCTTCTAAGAGCACA+AGG - chr8_2:31892384-31892403 Msa1244200:three_prime_UTR 40.0%
!! GTTGGAGGTATCAAATGGTT+TGG + chr8_2:31892472-31892491 Msa1244180:intron 40.0%
!! ACATCGTTGGAGGTATCAAA+TGG + chr8_2:31892477-31892496 Msa1244180:intron 40.0%
CACCAAACTGTCCGAAAATA+CGG - chr8_2:31892522-31892541 Msa1244200:three_prime_UTR 40.0%
! TACCGTATTTTCGGACAGTT+TGG + chr8_2:31892527-31892546 Msa1244180:intron 40.0%
TCGGAAAGCAATTAACCAAG+AGG + chr8_2:31892730-31892749 Msa1244180:intron 40.0%
CCACCAACTTGTGGTTAAAT+AGG + chr8_2:31892941-31892960 Msa1244180:three_prime_UTR 40.0%
! CCTATTTAACCACAAGTTGG+TGG - chr8_2:31892938-31892957 Msa1244200:CDS 40.0%
TTGTTAGACCCAATCATCGT+TGG + chr8_2:31893255-31893274 Msa1244180:three_prime_UTR 40.0%
CGATGATTGGGTCTAACAAA+AGG - chr8_2:31893256-31893275 Msa1244200:CDS 40.0%
!!! CCAACTAAGCAACTTTTTCG+AGG + chr8_2:31893288-31893307 Msa1244180:three_prime_UTR 40.0%
CCTCGAAAAAGTTGCTTAGT+TGG - chr8_2:31893285-31893304 Msa1244200:CDS 40.0%
CCAAAAGGCTTAGCAACTTA+TGG + chr8_2:31893330-31893349 Msa1244180:three_prime_UTR 40.0%
! CCATAAGTTGCTAAGCCTTT+TGG - chr8_2:31893327-31893346 Msa1244200:intron 40.0%
TAAGTTATGAGGGTGACGAA+TGG - chr8_2:31893524-31893543 Msa1244200:intron 40.0%
AAGTTATGAGGGTGACGAAT+GGG - chr8_2:31893525-31893544 Msa1244200:intron 40.0%
! TGGCTGCTTTGAATAAATGC+CGG + chr8_2:31893694-31893713 None:intergenic 40.0%
!! GCGATTTCTAGAACAGCATT+TGG - chr8_2:31893805-31893824 Msa1244200:CDS 40.0%
ATACACGAAGTCCGATGAAA+TGG - chr8_2:31893893-31893912 Msa1244200:CDS 40.0%
CATGAAAAGAGTAAGACAGC+TGG - chr8_2:31894169-31894188 Msa1244200:intron 40.0%
CCAAACTAACAAAGATGCAG+TGG + chr8_2:31894254-31894273 None:intergenic 40.0%
CCACTGCATCTTTGTTAGTT+TGG - chr8_2:31894251-31894270 Msa1244200:intron 40.0%
! TATTGGCTAGGTTTCCTGAA+TGG - chr8_2:31894284-31894303 Msa1244200:CDS 40.0%
ACGTGAGGATGAAAGTTTGA+TGG + chr8_2:31894481-31894500 None:intergenic 40.0%
!! TTGGTAACGGAAAATACGTG+AGG + chr8_2:31894496-31894515 None:intergenic 40.0%
!!! GGTGACCATGGTTTTATATG+AGG - chr8_2:31894856-31894875 Msa1244200:intron 40.0%
CAGGACCTCATATAAAACCA+TGG + chr8_2:31894864-31894883 None:intergenic 40.0%
! CTGTTGGTGGATATAATCTC+AGG + chr8_2:31894883-31894902 None:intergenic 40.0%
CGAACTAAGAAAACTGTTGG+TGG + chr8_2:31894896-31894915 None:intergenic 40.0%
GCTCGAACTAAGAAAACTGT+TGG + chr8_2:31894899-31894918 None:intergenic 40.0%
TTATTCCTGCAGGTAGTGAT+AGG + chr8_2:31894949-31894968 None:intergenic 40.0%
!! GTGAACCAAAAGTATCGGTA+TGG + chr8_2:31894978-31894997 None:intergenic 40.0%
CACCATGACTGTGATATATG+GGG - chr8_2:31894995-31895014 Msa1244200:intron 40.0%
! TTTTGGCCAATGCATGTTCT+AGG + chr8_2:31895115-31895134 None:intergenic 40.0%
TGGCCAAAACTTTGCCTTAT+TGG - chr8_2:31895126-31895145 Msa1244200:intron 40.0%
CATGCTTATAGTCTGCAGAA+AGG + chr8_2:31895198-31895217 None:intergenic 40.0%
TGCAAAGAAAGGATAGCAGT+GGG + chr8_2:31895223-31895242 None:intergenic 40.0%
CTTTCTTTGCAGCCAAAACA+CGG - chr8_2:31895232-31895251 Msa1244200:intron 40.0%
TTTCTTTGCAGCCAAAACAC+GGG - chr8_2:31895233-31895252 Msa1244200:intron 40.0%
CAAGCCGAATAAAACAAGAG+AGG - chr8_2:31895355-31895374 Msa1244200:intron 40.0%
TCTGATACCAGCTTATTGGT+TGG + chr8_2:31895599-31895618 None:intergenic 40.0%
TGCATCTGATACCAGCTTAT+TGG + chr8_2:31895603-31895622 None:intergenic 40.0%
!! TAGCAGAGAGCATCTTTCTA+GGG + chr8_2:31895824-31895843 None:intergenic 40.0%
TAGAAAGATGCTCTCTGCTA+GGG - chr8_2:31895824-31895843 Msa1244200:CDS 40.0%
GTAAGAATCCAGAAGGTAGC+TGG + chr8_2:31892291-31892310 Msa1244180:intron 45.0%
! AGCTTCTGGAAAGCCCATAA+AGG + chr8_2:31892333-31892352 Msa1244180:intron 45.0%
TCCAGAAGCTGAATTCCTTG+TGG - chr8_2:31892343-31892362 Msa1244200:three_prime_UTR 45.0%
ACCACAAGGAATTCAGCTTC+TGG + chr8_2:31892347-31892366 Msa1244180:intron 45.0%
! CTAAGAGCACAAGGTCTTCA+AGG - chr8_2:31892393-31892412 Msa1244200:three_prime_UTR 45.0%
GAAAGATTGCCACCAACTTG+TGG + chr8_2:31892950-31892969 Msa1244180:three_prime_UTR 45.0%
!! GGACAATGGTGTTATTGGCT+AGG - chr8_2:31894272-31894291 Msa1244200:CDS 45.0%
CACCCCATATATCACAGTCA+TGG + chr8_2:31895000-31895019 None:intergenic 45.0%
AAACCAGAAAGGTTCTCTGG+AGG - chr8_2:31895037-31895056 Msa1244200:intron 45.0%
ATTCCTCCAGAGAACCTTTC+TGG + chr8_2:31895043-31895062 None:intergenic 45.0%
! GTTCTCTGGAGGAATTGCAA+AGG - chr8_2:31895048-31895067 Msa1244200:intron 45.0%
GGAATTGCAAAGGCCACAAA+AGG - chr8_2:31895058-31895077 Msa1244200:intron 45.0%
!! TTCTAGGACCCCATCCAAAT+GGG + chr8_2:31895099-31895118 None:intergenic 45.0%
CTGCAAAGAAAGGATAGCAG+TGG + chr8_2:31895224-31895243 None:intergenic 45.0%
!!! CGTGTTTTGGCTGCAAAGAA+AGG + chr8_2:31895234-31895253 None:intergenic 45.0%
TTCTTTGCAGCCAAAACACG+GGG - chr8_2:31895234-31895253 Msa1244200:intron 45.0%
AACAAGAGAGGGAAAGGGAT+TGG - chr8_2:31895367-31895386 Msa1244200:intron 45.0%
! TTGGTTGGTTGGTCAAGACT+AGG - chr8_2:31895408-31895427 Msa1244200:intron 45.0%
GCAAATGCCAACCAATAAGC+TGG - chr8_2:31895589-31895608 Msa1244200:intron 45.0%
!! AGCAGAGAGCATCTTTCTAG+GGG + chr8_2:31895823-31895842 None:intergenic 45.0%
!! CTAGCAGAGAGCATCTTTCT+AGG + chr8_2:31895825-31895844 None:intergenic 45.0%
CTAGAAAGATGCTCTCTGCT+AGG - chr8_2:31895823-31895842 Msa1244200:CDS 45.0%
TGATCAGCTGTTAGTTGCTC+TGG - chr8_2:31895875-31895894 Msa1244200:CDS 45.0%
ACTATCACAGAGATGAGGTG+AGG + chr8_2:31895914-31895933 None:intergenic 45.0%
AGGTCACTATCACAGAGATG+AGG + chr8_2:31895919-31895938 None:intergenic 45.0%
CAGCCGTGTTTACACTGTTT+CGG - chr8_2:31895983-31896002 Msa1244200:five_prime_UTR 45.0%
CCACCGAAACAGTGTAAACA+CGG + chr8_2:31895989-31896008 None:intergenic 45.0%
CACTTTCACCAGCTACCTTC+TGG - chr8_2:31892280-31892299 Msa1244200:three_prime_UTR 50.0%
CCTCTTTGGTCTCAACCACA+AGG + chr8_2:31892361-31892380 Msa1244180:intron 50.0%
CCTTGTGGTTGAGACCAAAG+AGG - chr8_2:31892358-31892377 Msa1244200:three_prime_UTR 50.0%
GTGGTTGAGACCAAAGAGGT+TGG - chr8_2:31892362-31892381 Msa1244200:three_prime_UTR 50.0%
TTTGGCAGCAGCTATGTAGC+AGG - chr8_2:31893823-31893842 Msa1244200:CDS 50.0%
TTGGCAGCAGCTATGTAGCA+GGG - chr8_2:31893824-31893843 Msa1244200:CDS 50.0%
CGAGAGAAAGCCATGGACAA+TGG - chr8_2:31894082-31894101 Msa1244200:CDS 50.0%
GATGGCTTCTCCATTGTCCA+TGG + chr8_2:31894095-31894114 None:intergenic 50.0%
CTTGCACGTTCTTGCCATTC+AGG + chr8_2:31894301-31894320 None:intergenic 50.0%
CTGAATGGCAAGAACGTGCA+AGG - chr8_2:31894299-31894318 Msa1244200:CDS 50.0%
GGAAACCTATCACTACCTGC+AGG - chr8_2:31894941-31894960 Msa1244200:intron 50.0%
!! GTTCTAGGACCCCATCCAAA+TGG + chr8_2:31895100-31895119 None:intergenic 50.0%
TGGGGTCCTAGAACATGCAT+TGG - chr8_2:31895106-31895125 Msa1244200:intron 50.0%
! GAGGGAAAGGGATTGGCATT+TGG - chr8_2:31895374-31895393 Msa1244200:intron 50.0%
TGATCAGCCAGGAAACCCTA+GGG + chr8_2:31895861-31895880 None:intergenic 50.0%
CAACTAACAGCTGATCAGCC+AGG + chr8_2:31895872-31895891 None:intergenic 50.0%
ATCACAGAGATGAGGTGAGG+AGG + chr8_2:31895911-31895930 None:intergenic 50.0%
CCGTGTTTACACTGTTTCGG+TGG - chr8_2:31895986-31896005 Msa1244200:five_prime_UTR 50.0%
!! CTGTTTCGGTGGTGTTACGA+AGG - chr8_2:31895997-31896016 Msa1244200:five_prime_UTR 50.0%
GATCTGTGGCGCAACATCGT+TGG + chr8_2:31892490-31892509 Msa1244180:intron 55.0%
! GGGTCCGCGATGATCACTTT+TGG + chr8_2:31893415-31893434 None:intergenic 55.0%
! CGGATCTTAGCCCCGTGTTT+TGG + chr8_2:31895247-31895266 None:intergenic 55.0%
GATCAGCCAGGAAACCCTAG+GGG + chr8_2:31895860-31895879 None:intergenic 55.0%
CTGATCAGCCAGGAAACCCT+AGG + chr8_2:31895862-31895881 None:intergenic 55.0%
CTGTGGCGCAACATCGTTGG+AGG + chr8_2:31892487-31892506 Msa1244180:intron 60.0%
TAGGGTTTCGCCCTTCCCCT+AGG - chr8_2:31895842-31895861 Msa1244200:CDS 60.0%
AGGGTTTCGCCCTTCCCCTA+GGG - chr8_2:31895843-31895862 Msa1244200:CDS 60.0%
GCCAGGAAACCCTAGGGGAA+GGG + chr8_2:31895855-31895874 None:intergenic 60.0%
AGCCAGGAAACCCTAGGGGA+AGG + chr8_2:31895856-31895875 None:intergenic 60.0%
GCCCTTCCCCTAGGGTTTCC+TGG - chr8_2:31895851-31895870 Msa1244200:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 31892161 31896024 31892161 ID=Msa1244200;Name=Msa1244200
chr8_2 mRNA 31892161 31896024 31892161 ID=Msa1244200-mRNA-1;Parent=Msa1244200;Name=Msa1244200-mRNA-1;_AED=0.34;_eAED=0.34;_QI=112|1|1|1|1|1|5|742|511
chr8_2 exon 31892161 31893328 31892161 ID=Msa1244200-mRNA-1:exon:10531;Parent=Msa1244200-mRNA-1
chr8_2 exon 31893798 31894185 31893798 ID=Msa1244200-mRNA-1:exon:10530;Parent=Msa1244200-mRNA-1
chr8_2 exon 31894271 31894503 31894271 ID=Msa1244200-mRNA-1:exon:10529;Parent=Msa1244200-mRNA-1
chr8_2 exon 31894588 31894805 31894588 ID=Msa1244200-mRNA-1:exon:10528;Parent=Msa1244200-mRNA-1
chr8_2 exon 31895642 31896024 31895642 ID=Msa1244200-mRNA-1:exon:10527;Parent=Msa1244200-mRNA-1
chr8_2 five_prime_UTR 31895913 31896024 31895913 ID=Msa1244200-mRNA-1:five_prime_utr;Parent=Msa1244200-mRNA-1
chr8_2 CDS 31895642 31895912 31895642 ID=Msa1244200-mRNA-1:cds;Parent=Msa1244200-mRNA-1
chr8_2 CDS 31894588 31894805 31894588 ID=Msa1244200-mRNA-1:cds;Parent=Msa1244200-mRNA-1
chr8_2 CDS 31894271 31894503 31894271 ID=Msa1244200-mRNA-1:cds;Parent=Msa1244200-mRNA-1
chr8_2 CDS 31893798 31894185 31893798 ID=Msa1244200-mRNA-1:cds;Parent=Msa1244200-mRNA-1
chr8_2 CDS 31892903 31893328 31892903 ID=Msa1244200-mRNA-1:cds;Parent=Msa1244200-mRNA-1
chr8_2 three_prime_UTR 31892161 31892902 31892161 ID=Msa1244200-mRNA-1:three_prime_utr;Parent=Msa1244200-mRNA-1
Gene Sequence

>Msa1244200

ATGGAGGCACTTTCACCAGCTACCTTCTGGATTCTTACAGTCATAATTGCTACTATTCCTTTATGGGCTTTCCAGAAGCTGAATTCCTTGTGGTTGAGACCAAAGAGGTTGGAAAAGCTTCTAAGAGCACAAGGTCTTCAAGGAGATTCATACAAGTTGTTCAACTCAAAGTTGAAGATGCAACATGAAGCCAAATCCAAACCATTTGATACCTCCAACGATGTTGCGCCACAGATCTTTTCATTCGTACACCAAACTGTCCGAAAATACGGCAAGAGTTCATTTTTATGGGAAGGTAGAATACCAAAAGTGATCATCGCGGACCCTGAACAAATCAAACAAGTGTTTAACAAGATGCATGACTTCACCAAACCAAAGTTCGATTCCATTGCTAAGTGTTTGTTCGTTGGATTAGTAAGTTATGAGGGTGACGAATGGGCAAAACATCGAAAGATTATAAACCCTGCATTTCACATTGATAAATTGAGAAATATGCTACCGGCATTTATTCAAAGCAGCCATGATATGATTAGCAAATGGAAGGAAATGTTGACATCAGATGAATCATGTGAGATTGATGTCCGGCCTTTCATTCAAAACTTGACTGGTGATGCGATTTCTAGAACAGCATTTGGCAGCAGCTATGTAGCAGGGTCAAAAATATTTGATCTTATAAGATTGCAGGGGCATATTCTATTTAATACACGAAGTCCGATGAAATGGTTTCTACCTACAAGTTCCAACAAAAGGATGAAGGAAATCGATAGAGAGATTTATGATTTAGTCGAGGGTATCATTAAAATACGAGAGAAAGCCATGGACAATGGAGAAGCCATCAATGATGATTTATTAGGCTTACTGATGGAATCAAATAACCTTGAAATTCAAGGTCATGAAAAGAGTAAGACAGCTGGAATGACATATGATGAAGTAGTTAAAGAATGTAAGCAATTCTACATTGCAGGACAAGAGACCACTGCATCTTTGTTAGTTTGGACAATGGTGTTATTGGCTAGGTTTCCTGAATGGCAAGAACGTGCAAGGCAAGAAGTTTTGCAAGTTTTTGGAAACCAAAATCCAAATCATGATGGGTTAAGTCAACTTAAAATTGTGACCATGGTTTTATATGAGGTCCTGAGATTATATCCACCAACAGTTTTCTTAGTTCGAGCTGTAAAAAAAAATTTAAAACTTGGAAACCTATCACTACCTGCAGGAATAAATGTTTCCATACCGATACTTTTGGTTCACCATGACTGTGATATATGGGGTGATGATGCAAAAGAGTTTAAACCAGAAAGGTTCTCTGGAGGAATTGCAAAGGCCACAAAAGGTCAAGTTTCATTTTTCCCATTTGGATGGGGTCCTAGAACATGCATTGGCCAAAACTTTGCCTTATTGGAAGCCAAAGTAGTATTGTCACTACTTCTGCAAAATTTCTCATTTGACCTTTCTGCAGACTATAAGCATGATCCCACTGCTATCCTTTCTTTGCAGCCAAAACACGGGGCTAAGATCCGTCTGCAAAAACTGTAA
Protein sequence

>Msa1244200

MEALSPATFWILTVIIATIPLWAFQKLNSLWLRPKRLEKLLRAQGLQGDSYKLFNSKLKMQHEAKSKPFDTSNDVAPQIFSFVHQTVRKYGKSSFLWEGRIPKVIIADPEQIKQVFNKMHDFTKPKFDSIAKCLFVGLVSYEGDEWAKHRKIINPAFHIDKLRNMLPAFIQSSHDMISKWKEMLTSDESCEIDVRPFIQNLTGDAISRTAFGSSYVAGSKIFDLIRLQGHILFNTRSPMKWFLPTSSNKRMKEIDREIYDLVEGIIKIREKAMDNGEAINDDLLGLLMESNNLEIQGHEKSKTAGMTYDEVVKECKQFYIAGQETTASLLVWTMVLLARFPEWQERARQEVLQVFGNQNPNHDGLSQLKIVTMVLYEVLRLYPPTVFLVRAVKKNLKLGNLSLPAGINVSIPILLVHHDCDIWGDDAKEFKPERFSGGIAKATKGQVSFFPFGWGPRTCIGQNFALLEAKVVLSLLLQNFSFDLSADYKHDPTAILSLQPKHGAKIRLQKL*