AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0624230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0624230 MtrunA17_Chr8g0354571 63.672 512 172 3 11 511 16 524 0.0 679
Msa0624230 MtrunA17_Chr8g0354531 64.133 513 169 5 10 511 137 645 0.0 672
Msa0624230 MtrunA17_Chr8g0354511 63.672 512 172 3 11 511 16 524 0.0 662
Msa0624230 MtrunA17_Chr2g0313821 54.651 516 226 2 4 511 1 516 0.0 603
Msa0624230 MtrunA17_Chr2g0313801 54.845 516 225 2 4 511 1 516 0.0 598
Msa0624230 MtrunA17_Chr2g0313751 54.971 513 219 5 10 511 32 543 0.0 597
Msa0624230 MtrunA17_Chr2g0313781 53.977 528 223 3 4 511 1 528 0.0 595
Msa0624230 MtrunA17_Chr2g0313771 54.111 523 227 4 1 511 2 523 0.0 587
Msa0624230 MtrunA17_Chr2g0313791 54.457 516 222 3 4 511 1 511 0.0 587
Msa0624230 MtrunA17_Chr2g0313831 52.601 519 235 3 1 511 1 516 0.0 580
Msa0624230 MtrunA17_Chr5g0446131 53.242 509 229 3 11 511 7 514 0.0 572
Msa0624230 MtrunA17_Chr2g0307301 51.866 509 236 3 11 511 11 518 0.0 567
Msa0624230 MtrunA17_Chr2g0313811 55.773 511 206 3 21 511 18 528 0.0 567
Msa0624230 MtrunA17_Chr2g0313761 55.021 478 206 3 42 511 35 511 0.0 561
Msa0624230 MtrunA17_Chr2g0307291 51.550 516 236 4 9 511 4 518 0.0 558
Msa0624230 MtrunA17_Chr2g0288661 50.096 519 250 3 1 511 1 518 0.0 554
Msa0624230 MtrunA17_Chr4g0014051 47.683 518 259 5 4 511 13 528 1.93e-171 494
Msa0624230 MtrunA17_Chr4g0063221 38.462 520 294 10 10 511 8 519 8.67e-113 344
Msa0624230 MtrunA17_Chr8g0354561 53.211 327 119 4 11 326 98 401 1.66e-111 336
Msa0624230 MtrunA17_Chr1g0193811 37.980 495 289 8 30 511 27 516 1.52e-109 335
Msa0624230 MtrunA17_Chr7g0262111 37.000 500 287 11 25 511 21 505 2.50e-103 319
Msa0624230 MtrunA17_Chr1g0154731 34.615 494 299 9 29 511 23 503 3.38e-97 303
Msa0624230 MtrunA17_Chr6g0457421 32.370 519 316 10 11 511 6 507 3.48e-97 303
Msa0624230 MtrunA17_Chr8g0354541 73.596 178 47 0 334 511 1 178 5.97e-96 288
Msa0624230 MtrunA17_Chr7g0215181 32.563 519 315 12 11 511 8 509 4.76e-95 298
Msa0624230 MtrunA17_Chr7g0235261 32.939 507 306 9 31 511 12 510 3.06e-92 290
Msa0624230 MtrunA17_Chr1g0203141 33.871 496 307 11 29 511 28 515 3.72e-92 290
Msa0624230 MtrunA17_Chr4g0004601 32.681 511 307 10 27 511 32 531 1.05e-91 290
Msa0624230 MtrunA17_Chr3g0128461 31.176 510 321 8 22 510 23 523 1.29e-85 273
Msa0624230 MtrunA17_Chr1g0203151 32.114 492 317 9 29 511 28 511 5.33e-83 266
Msa0624230 MtrunA17_Chr8g0336361 30.853 551 326 10 12 511 12 558 1.52e-81 264
Msa0624230 MtrunA17_Chr6g0472221 32.821 521 324 10 11 511 12 526 2.17e-81 263
Msa0624230 MtrunA17_Chr8g0364081 33.208 530 315 17 11 511 22 541 9.36e-80 259
Msa0624230 MtrunA17_Chr6g0479681 31.507 511 312 12 29 511 29 529 2.50e-78 254
Msa0624230 MtrunA17_Chr8g0362731 34.586 399 245 8 121 511 18 408 3.10e-78 251
Msa0624230 MtrunA17_Chr2g0308651 35.385 390 237 7 137 511 26 415 8.14e-72 234
Msa0624230 MtrunA17_Chr6g0472171 39.130 138 84 0 374 511 21 158 1.71e-36 132
Msa0624230 MtrunA17_Chr1g0179811 25.424 472 312 11 64 510 82 538 2.26e-36 141
Msa0624230 MtrunA17_Chr1g0182861 39.855 138 83 0 374 511 26 163 3.05e-36 132
Msa0624230 MtrunA17_Chr5g0396521 25.397 441 258 12 104 486 117 544 8.32e-35 137
Msa0624230 MtrunA17_Chr0c19g0493771 26.415 371 235 11 137 485 267 621 5.86e-32 130
Msa0624230 MtrunA17_Chr5g0403351 25.747 435 276 13 83 489 61 476 6.16e-32 128
Msa0624230 MtrunA17_Chr6g0472161 27.247 356 239 9 29 371 24 372 7.72e-29 117
Msa0624230 MtrunA17_Chr3g0101631 24.717 441 282 14 79 491 53 471 7.88e-28 116
Msa0624230 MtrunA17_Chr4g0024771 24.485 437 294 13 89 507 70 488 8.30e-28 116
Msa0624230 MtrunA17_Chr5g0445531 25.346 434 284 13 81 491 58 474 1.11e-27 116
Msa0624230 MtrunA17_Chr5g0445441 26.540 422 273 13 89 490 111 515 3.47e-27 115
Msa0624230 MtrunA17_Chr5g0445451 27.423 423 270 13 89 491 70 475 7.42e-27 113
Msa0624230 MtrunA17_Chr3g0108651 47.959 98 51 0 396 493 1 98 1.07e-26 104
Msa0624230 MtrunA17_Chr4g0058231 25.400 437 286 17 78 484 43 469 1.33e-26 112
Msa0624230 MtrunA17_Chr3g0101601 26.328 433 272 19 79 484 53 465 1.97e-26 112
Msa0624230 MtrunA17_Chr5g0445381 26.179 424 274 11 89 491 101 506 5.70e-26 111
Msa0624230 MtrunA17_Chr4g0058191 25.747 435 279 17 78 484 40 458 1.02e-25 110
Msa0624230 MtrunA17_Chr3g0101621 25.799 438 279 18 79 491 50 466 1.40e-25 109
Msa0624230 MtrunA17_Chr5g0445461 25.708 424 274 14 89 490 70 474 1.89e-25 109
Msa0624230 MtrunA17_Chr1g0162811 22.991 448 313 13 79 507 54 488 2.16e-25 109
Msa0624230 MtrunA17_Chr2g0307311 42.373 118 63 2 41 154 6 122 8.58e-25 99.8
Msa0624230 MtrunA17_Chr4g0035921 24.651 430 289 12 87 489 65 486 9.34e-25 107
Msa0624230 MtrunA17_Chr5g0403331 25.117 426 280 14 88 489 67 477 9.78e-25 107
Msa0624230 MtrunA17_Chr4g0020041 21.946 442 307 15 87 507 66 490 1.29e-24 107
Msa0624230 MtrunA17_Chr8g0372251 26.817 399 257 13 87 461 63 450 1.66e-24 106
Msa0624230 MtrunA17_Chr1g0174461 25.576 434 277 18 84 487 61 478 2.69e-24 106
Msa0624230 MtrunA17_Chr3g0116741 23.866 419 288 17 88 487 80 486 3.25e-24 105
Msa0624230 MtrunA17_Chr3g0101691 24.942 433 284 16 79 484 55 473 3.39e-24 105
Msa0624230 MtrunA17_Chr5g0445421 24.638 414 272 11 89 491 144 528 3.67e-24 105
Msa0624230 MtrunA17_Chr7g0246221 23.598 428 287 11 88 489 63 476 9.37e-24 104
Msa0624230 MtrunA17_Chr3g0101701 24.074 432 281 15 88 491 68 480 9.39e-24 104
Msa0624230 MtrunA17_Chr6g0449331 24.724 453 290 20 97 510 74 514 1.72e-23 103
Msa0624230 MtrunA17_Chr4g0058201 25.339 442 281 19 78 489 43 465 1.80e-23 103
Msa0624230 MtrunA17_Chr3g0101731 22.717 427 291 12 88 491 66 476 2.36e-23 103
Msa0624230 MtrunA17_Chr5g0405001 23.990 421 284 11 88 484 73 481 2.45e-23 103
Msa0624230 MtrunA17_Chr5g0431671 23.583 441 296 13 72 491 56 476 3.42e-23 102
Msa0624230 MtrunA17_Chr4g0058261 23.356 441 286 18 78 484 77 499 5.40e-23 102
Msa0624230 MtrunA17_Chr5g0403321 24.476 429 278 15 85 484 63 474 5.58e-23 102
Msa0624230 MtrunA17_Chr1g0184421 25.485 412 255 15 129 510 114 503 5.91e-23 102
Msa0624230 MtrunA17_Chr4g0047641 23.944 426 291 13 80 484 71 484 6.66e-23 102
Msa0624230 MtrunA17_Chr3g0101711 22.717 449 296 16 73 491 52 479 1.13e-22 101
Msa0624230 MtrunA17_Chr4g0038271 22.851 442 294 13 104 510 130 559 1.14e-22 101
Msa0624230 MtrunA17_Chr4g0076161 23.326 433 284 12 81 484 58 471 1.31e-22 100
Msa0624230 MtrunA17_Chr3g0101671 23.888 427 288 15 88 491 68 480 1.63e-22 100
Msa0624230 MtrunA17_Chr4g0058281 24.235 425 274 17 89 484 76 481 2.54e-22 100
Msa0624230 MtrunA17_Chr6g0449341 25.217 460 279 21 97 510 122 562 3.01e-22 100
Msa0624230 MtrunA17_Chr8g0390881 23.866 419 292 13 88 487 65 475 3.29e-22 99.8
Msa0624230 MtrunA17_Chr5g0431641 24.485 437 296 13 72 491 56 475 3.52e-22 99.8
Msa0624230 MtrunA17_Chr1g0182871 31.276 243 156 5 137 375 27 262 3.98e-22 95.9
Msa0624230 MtrunA17_Chr8g0380471 27.047 403 233 14 129 509 111 474 4.95e-22 99.0
Msa0624230 MtrunA17_Chr1g0174451 26.174 447 290 18 84 502 62 496 5.46e-22 99.0
Msa0624230 MtrunA17_Chr6g0463791 24.362 431 274 15 89 491 68 474 6.90e-22 98.6
Msa0624230 MtrunA17_Chr8g0351401 25.285 439 273 16 103 503 81 502 6.98e-22 99.0
Msa0624230 MtrunA17_Chr8g0351391 23.779 471 284 19 82 507 67 507 8.79e-22 98.6
Msa0624230 MtrunA17_Chr6g0449381 23.438 448 292 16 97 510 74 504 9.05e-22 98.6
Msa0624230 MtrunA17_Chr3g0101721 23.649 444 296 15 88 507 67 491 9.06e-22 98.6
Msa0624230 MtrunA17_Chr3g0101661 22.897 428 298 14 84 489 60 477 9.29e-22 98.6
Msa0624230 MtrunA17_Chr1g0151221 24.082 490 296 19 76 510 59 527 9.83e-22 98.6
Msa0624230 MtrunA17_Chr6g0465511 24.651 430 279 14 88 490 64 475 1.03e-21 98.2
Msa0624230 MtrunA17_Chr7g0255531 24.078 461 305 15 51 482 18 462 1.14e-21 98.2
Msa0624230 MtrunA17_Chr6g0484811 23.571 420 286 13 88 484 66 473 1.30e-21 97.8
Msa0624230 MtrunA17_Chr3g0101811 23.725 451 300 15 88 507 67 504 1.31e-21 98.2
Msa0624230 MtrunA17_Chr6g0466331 24.651 430 279 14 88 490 64 475 1.31e-21 97.8
Msa0624230 MtrunA17_Chr3g0119681 23.641 423 255 12 104 480 86 486 1.80e-21 97.8
Msa0624230 MtrunA17_Chr7g0248991 25.161 310 214 8 137 435 49 351 1.86e-21 96.3
Msa0624230 MtrunA17_Chr3g0101571 24.099 444 287 19 78 491 51 474 1.87e-21 97.4
Msa0624230 MtrunA17_Chr4g0052851 26.389 432 269 20 83 493 58 461 2.34e-21 97.1
Msa0624230 MtrunA17_Chr8g0334891 23.714 350 233 11 151 488 133 460 2.52e-21 97.1
Msa0624230 MtrunA17_Chr8g0351461 25.277 451 282 18 75 485 47 482 2.88e-21 97.1
Msa0624230 MtrunA17_Chr8g0361471 25.059 423 274 14 88 484 64 469 3.63e-21 96.7
Msa0624230 MtrunA17_Chr8g0344151 24.829 439 281 14 83 491 60 479 3.64e-21 96.7
Msa0624230 MtrunA17_Chr4g0047631 24.464 466 292 20 54 484 40 480 4.74e-21 96.3
Msa0624230 MtrunA17_Chr5g0419451 23.858 394 269 14 104 480 105 484 6.15e-21 95.9
Msa0624230 MtrunA17_Chr1g0156101 22.566 452 297 15 88 503 62 496 6.80e-21 95.9
Msa0624230 MtrunA17_Chr4g0052861 25.058 431 271 17 89 491 62 468 8.29e-21 95.5
Msa0624230 MtrunA17_Chr4g0046331 24.609 447 278 19 82 490 55 480 9.42e-21 95.5
Msa0624230 MtrunA17_Chr5g0446161 23.516 438 290 15 79 491 58 475 9.67e-21 95.1
Msa0624230 MtrunA17_Chr1g0164321 22.838 451 302 14 97 510 105 546 1.27e-20 95.1
Msa0624230 MtrunA17_Chr7g0260831 21.818 440 290 15 103 510 84 501 1.38e-20 94.7
Msa0624230 MtrunA17_Chr8g0351311 22.698 467 295 16 82 507 67 508 1.39e-20 94.7
Msa0624230 MtrunA17_Chr3g0101611 25.265 471 267 22 78 491 53 495 1.73e-20 94.4
Msa0624230 MtrunA17_Chr4g0026941 25.180 417 249 16 104 480 114 507 1.90e-20 94.7
Msa0624230 MtrunA17_Chr4g0046351 23.371 445 284 17 82 490 55 478 2.55e-20 94.0
Msa0624230 MtrunA17_Chr4g0047661 22.749 422 286 15 89 484 78 485 2.83e-20 94.0
Msa0624230 MtrunA17_Chr8g0344181 25.000 440 279 16 83 491 62 481 2.96e-20 94.0
Msa0624230 MtrunA17_Chr2g0280081 25.753 365 237 12 140 482 120 472 3.17e-20 94.7
Msa0624230 MtrunA17_Chr2g0280081 28.571 294 179 12 210 482 690 973 2.70e-19 91.7
Msa0624230 MtrunA17_Chr4g0047691 24.186 430 290 16 78 484 67 483 3.64e-20 93.6
Msa0624230 MtrunA17_Chr4g0058211 31.461 178 119 3 309 484 10 186 4.58e-20 89.0
Msa0624230 MtrunA17_Chr6g0449361 22.222 477 304 19 77 510 50 502 5.75e-20 92.8
Msa0624230 MtrunA17_Chr7g0227281 22.947 475 295 18 78 510 48 493 6.93e-20 92.4
Msa0624230 MtrunA17_Chr8g0364651 27.500 240 162 6 253 485 235 469 9.63e-20 92.0
Msa0624230 MtrunA17_Chr8g0390871 30.588 170 116 2 320 487 28 197 1.33e-19 87.8
Msa0624230 MtrunA17_Chr3g0101821 24.476 429 284 13 84 486 57 471 1.41e-19 91.7
Msa0624230 MtrunA17_Chr1g0174441 23.678 435 286 16 84 487 81 500 1.44e-19 91.7
Msa0624230 MtrunA17_Chr3g0084921 24.485 437 283 20 84 487 60 482 2.20e-19 91.3
Msa0624230 MtrunA17_Chr1g0204271 23.575 386 234 14 137 485 118 479 2.31e-19 90.9
Msa0624230 MtrunA17_Chr6g0463801 24.524 420 287 11 88 491 67 472 3.64e-19 90.5
Msa0624230 MtrunA17_Chr8g0377341 25.581 430 277 16 77 480 81 493 4.09e-19 90.5
Msa0624230 MtrunA17_Chr1g0174481 24.711 433 279 16 84 487 59 473 4.45e-19 90.1
Msa0624230 MtrunA17_Chr1g0163491 22.368 456 291 15 97 510 86 520 4.61e-19 90.1
Msa0624230 MtrunA17_Chr3g0101751 23.982 442 297 12 88 507 72 496 5.02e-19 90.1
Msa0624230 MtrunA17_Chr3g0101761 23.756 442 298 13 88 507 65 489 5.28e-19 90.1
Msa0624230 MtrunA17_Chr3g0101651 22.883 437 292 15 84 491 60 480 5.39e-19 90.1
Msa0624230 MtrunA17_Chr8g0351421 23.756 442 289 17 78 485 56 483 5.94e-19 89.7
Msa0624230 MtrunA17_Chr6g0451751 24.362 431 273 16 89 480 73 489 6.20e-19 89.7
Msa0624230 MtrunA17_Chr5g0430081 22.624 442 314 15 88 511 64 495 6.24e-19 89.7
Msa0624230 MtrunA17_Chr4g0046321 22.222 432 295 13 82 484 55 474 6.34e-19 89.7
Msa0624230 MtrunA17_Chr7g0235551 24.664 446 297 16 76 491 47 483 6.57e-19 89.7
Msa0624230 MtrunA17_Chr5g0446151 23.165 436 295 13 79 491 58 476 6.89e-19 89.7
Msa0624230 MtrunA17_Chr1g0163451 27.473 273 166 10 254 510 267 523 6.91e-19 89.7
Msa0624230 MtrunA17_Chr2g0280011 30.928 194 124 4 311 495 1 193 7.82e-19 85.1
Msa0624230 MtrunA17_Chr5g0431591 25.083 303 205 7 201 491 1 293 9.44e-19 87.4
Msa0624230 MtrunA17_Chr1g0163391 24.454 458 261 19 104 510 78 501 9.99e-19 89.0
Msa0624230 MtrunA17_Chr8g0387101 31.746 189 118 5 306 484 289 476 1.07e-18 89.0
Msa0624230 MtrunA17_Chr8g0351441 24.538 379 243 12 137 485 117 482 1.07e-18 89.0
Msa0624230 MtrunA17_Chr1g0163371 29.515 227 137 7 299 510 3 221 1.08e-18 85.1
Msa0624230 MtrunA17_Chr8g0334941 24.534 322 209 11 175 484 2 301 1.15e-18 87.4
Msa0624230 MtrunA17_Chr2g0321171 24.605 443 261 15 104 508 88 495 1.23e-18 89.0
Msa0624230 MtrunA17_Chr4g0067191 23.362 458 282 17 106 510 73 514 1.43e-18 88.6
Msa0624230 MtrunA17_Chr3g0101581 22.126 461 312 14 78 506 52 497 1.69e-18 88.6
Msa0624230 MtrunA17_Chr4g0004481 23.077 455 280 16 97 511 68 492 1.82e-18 88.2
Msa0624230 MtrunA17_Chr5g0430031 22.122 443 315 15 88 511 66 497 1.84e-18 88.2
Msa0624230 MtrunA17_Chr6g0449351 21.987 473 310 19 78 511 11 463 2.05e-18 87.8
Msa0624230 MtrunA17_Chr7g0225531 26.786 280 180 8 240 510 247 510 2.05e-18 88.2
Msa0624230 MtrunA17_Chr1g0162801 23.235 439 300 14 90 507 69 491 2.38e-18 87.8
Msa0624230 MtrunA17_Chr1g0205361 24.706 255 177 7 239 489 227 470 2.44e-18 87.8
Msa0624230 MtrunA17_Chr8g0387001 22.727 440 288 12 104 509 82 503 3.15e-18 87.4
Msa0624230 MtrunA17_Chr4g0017411 25.000 440 275 19 83 496 55 465 3.33e-18 87.4
Msa0624230 MtrunA17_Chr8g0344191 25.000 440 280 18 83 491 93 513 3.53e-18 87.4
Msa0624230 MtrunA17_Chr2g0280071 26.829 328 215 10 174 484 188 507 3.57e-18 87.8
Msa0624230 MtrunA17_Chr1g0163281 22.715 361 224 9 185 510 178 518 6.01e-18 86.7
Msa0624230 MtrunA17_Chr2g0307321 41.935 93 50 1 165 253 1 93 6.60e-18 79.3
Msa0624230 MtrunA17_Chr7g0265611 25.926 297 205 8 200 487 198 488 6.95e-18 86.7
Msa0624230 MtrunA17_Chr7g0258221 23.476 443 305 14 83 503 58 488 7.27e-18 86.3
Msa0624230 MtrunA17_Chr1g0163421 22.222 468 303 18 86 510 90 539 8.07e-18 86.3
Msa0624230 MtrunA17_Chr1g0200951 21.395 430 287 14 99 498 105 513 8.68e-18 86.3
Msa0624230 MtrunA17_Chr5g0431511 21.963 428 301 15 84 489 59 475 8.78e-18 86.3
Msa0624230 MtrunA17_Chr4g0053621 24.084 382 240 13 139 493 116 474 8.79e-18 86.3
Msa0624230 MtrunA17_Chr7g0246151 25.100 251 176 5 239 485 229 471 8.92e-18 86.3
Msa0624230 MtrunA17_Chr7g0227291 22.363 474 299 16 78 510 48 493 9.18e-18 85.9
Msa0624230 MtrunA17_Chr1g0164211 24.706 255 177 6 239 489 224 467 1.00e-17 85.9
Msa0624230 MtrunA17_Chr5g0400411 24.697 413 280 12 81 483 71 462 1.01e-17 85.9
Msa0624230 MtrunA17_Chr8g0339331 22.066 426 296 11 89 487 71 487 1.07e-17 85.9
Msa0624230 MtrunA17_Chr2g0280121 26.301 365 237 13 140 482 124 478 1.15e-17 85.9
Msa0624230 MtrunA17_Chr5g0431501 22.454 432 298 13 84 491 59 477 1.69e-17 85.1
Msa0624230 MtrunA17_Chr5g0431461 22.454 432 298 13 84 491 59 477 1.69e-17 85.1
Msa0624230 MtrunA17_Chr6g0472311 27.919 197 137 4 299 491 296 491 2.66e-17 84.7
Msa0624230 MtrunA17_Chr1g0198191 27.600 250 166 8 242 480 236 481 2.70e-17 84.7
Msa0624230 MtrunA17_Chr5g0430071 24.092 303 211 9 222 511 54 350 3.01e-17 83.6
Msa0624230 MtrunA17_Chr5g0401691 23.303 442 261 13 79 480 71 474 3.45e-17 84.3
Msa0624230 MtrunA17_Chr7g0260821 22.062 417 255 17 103 480 85 470 3.88e-17 84.3
Msa0624230 MtrunA17_Chr7g0258211 21.875 448 301 15 75 491 58 487 3.99e-17 84.3
Msa0624230 MtrunA17_Chr8g0380501 23.884 448 284 17 97 510 66 490 4.11e-17 84.0
Msa0624230 MtrunA17_Chr8g0362481 23.404 423 281 16 96 489 3 411 4.21e-17 83.6
Msa0624230 MtrunA17_Chr3g0135841 22.938 497 298 17 76 510 62 535 4.32e-17 84.3
Msa0624230 MtrunA17_Chr1g0174431 27.835 194 125 4 318 497 1 193 7.86e-17 79.3
Msa0624230 MtrunA17_Chr8g0357421 22.748 444 298 14 88 507 67 489 8.12e-17 83.2
Msa0624230 MtrunA17_Chr3g0101801 23.653 427 288 13 88 491 72 483 9.04e-17 83.2
Msa0624230 MtrunA17_Chr1g0163501 24.276 449 272 17 104 510 76 498 9.86e-17 82.8
Msa0624230 MtrunA17_Chr7g0218611 23.853 327 214 11 176 483 157 467 1.01e-16 82.8
Msa0624230 MtrunA17_Chr3g0116681 24.221 417 280 15 89 484 70 471 1.04e-16 82.8
Msa0624230 MtrunA17_Chr7g0255131 22.126 461 275 18 99 509 80 506 1.08e-16 82.8
Msa0624230 MtrunA17_Chr4g0011981 24.746 295 195 9 206 484 181 464 1.15e-16 82.8
Msa0624230 MtrunA17_Chr1g0160861 25.092 271 183 9 244 510 73 327 1.36e-16 81.3
Msa0624230 MtrunA17_Chr7g0224551 22.824 425 285 16 88 484 61 470 1.38e-16 82.4
Msa0624230 MtrunA17_Chr1g0197871 28.095 210 139 5 280 487 267 466 1.38e-16 82.4
Msa0624230 MtrunA17_Chr5g0443401 22.500 440 294 13 82 502 67 478 1.40e-16 82.4
Msa0624230 MtrunA17_Chr8g0357431 23.799 437 303 14 88 507 67 490 1.47e-16 82.4
Msa0624230 MtrunA17_Chr6g0458561 22.535 426 291 15 89 487 87 500 1.57e-16 82.4
Msa0624230 MtrunA17_Chr8g0351801 23.922 255 179 4 249 489 238 491 1.62e-16 82.4
Msa0624230 MtrunA17_Chr4g0052881 23.877 423 267 15 88 480 61 458 1.63e-16 82.0
Msa0624230 MtrunA17_Chr2g0280061 29.897 194 126 4 311 495 1 193 2.06e-16 78.2
Msa0624230 MtrunA17_Chr3g0086651 23.358 411 273 14 104 484 76 474 2.63e-16 81.6
Msa0624230 MtrunA17_Chr8g0362701 23.326 433 297 15 84 491 60 482 3.05e-16 81.3
Msa0624230 MtrunA17_Chr5g0430101 21.667 420 291 14 88 484 65 469 3.97e-16 80.9
Msa0624230 MtrunA17_Chr3g0086661 23.358 411 273 14 104 484 76 474 4.10e-16 80.9
Msa0624230 MtrunA17_Chr1g0163461 22.247 454 295 17 97 510 83 518 4.27e-16 80.9
Msa0624230 MtrunA17_Chr2g0280041 29.787 188 122 4 306 484 320 506 4.32e-16 80.9
Msa0624230 MtrunA17_Chr1g0184461 23.940 401 259 14 137 510 122 503 4.75e-16 80.9
Msa0624230 MtrunA17_Chr6g0451781 23.256 430 279 17 89 480 106 522 4.77e-16 80.9
Msa0624230 MtrunA17_Chr4g0011851 28.144 167 117 3 320 484 18 183 5.16e-16 77.0
Msa0624230 MtrunA17_Chr5g0446101 26.667 195 140 3 299 491 95 288 5.57e-16 79.0
Msa0624230 MtrunA17_Chr1g0210091 23.282 451 276 13 71 480 81 502 6.17e-16 80.5
Msa0624230 MtrunA17_Chr6g0463621 24.870 193 136 4 319 506 2 190 7.24e-16 76.3
Msa0624230 MtrunA17_Chr2g0296661 25.556 450 269 19 78 491 54 473 7.28e-16 80.1
Msa0624230 MtrunA17_Chr1g0163211 22.553 470 306 17 78 510 52 500 7.41e-16 80.1
Msa0624230 MtrunA17_Chr4g0011961 24.422 303 197 9 200 484 175 463 9.22e-16 79.7
Msa0624230 MtrunA17_Chr1g0174471 24.027 437 286 16 84 489 75 496 9.66e-16 80.1
Msa0624230 MtrunA17_Chr6g0451681 29.379 177 119 5 309 480 267 442 1.03e-15 79.7
Msa0624230 MtrunA17_Chr4g0046631 24.286 420 277 16 89 480 78 484 1.11e-15 79.7
Msa0624230 MtrunA17_Chr1g0197851 26.104 249 171 6 239 484 225 463 1.25e-15 79.3
Msa0624230 MtrunA17_Chr3g0082701 23.666 431 277 17 90 480 72 490 1.33e-15 79.3
Msa0624230 MtrunA17_Chr1g0167321 22.517 453 312 13 79 507 51 488 1.35e-15 79.3
Msa0624230 MtrunA17_Chr5g0430131 24.080 299 202 9 201 484 183 471 1.62e-15 79.0
Msa0624230 MtrunA17_Chr6g0484841 21.535 469 316 15 50 484 22 472 1.73e-15 79.0
Msa0624230 MtrunA17_Chr1g0197881 26.104 249 171 6 239 484 224 462 1.82e-15 79.0
Msa0624230 MtrunA17_Chr8g0382901 23.150 419 294 13 75 484 44 443 1.83e-15 79.7
Msa0624230 MtrunA17_Chr8g0382901 22.066 426 289 13 83 484 516 922 1.51e-13 73.6
Msa0624230 MtrunA17_Chr5g0403451 26.222 225 132 6 318 510 56 278 1.83e-15 77.0
Msa0624230 MtrunA17_Chr1g0197891 25.703 249 172 6 239 484 225 463 2.76e-15 78.2
Msa0624230 MtrunA17_Chr2g0334021 29.082 196 124 4 302 484 277 470 2.82e-15 78.2
Msa0624230 MtrunA17_Chr5g0413911 27.807 187 127 4 301 480 310 495 3.11e-15 78.2
Msa0624230 MtrunA17_Chr5g0395321 21.245 466 318 16 51 489 27 470 3.13e-15 78.2
Msa0624230 MtrunA17_Chr1g0163351 21.930 456 293 15 97 510 70 504 3.18e-15 78.2
Msa0624230 MtrunA17_Chr1g0178971 25.000 412 255 15 104 484 93 481 3.59e-15 78.2
Msa0624230 MtrunA17_Chr5g0430091 22.170 424 286 13 88 484 66 472 3.81e-15 77.8
Msa0624230 MtrunA17_Chr8g0369791 22.398 442 288 16 82 508 61 462 3.88e-15 77.8
Msa0624230 MtrunA17_Chr3g0086691 23.251 443 291 18 77 484 46 474 3.90e-15 77.8
Msa0624230 MtrunA17_Chr1g0160851 27.011 174 124 3 318 489 298 470 3.96e-15 77.8
Msa0624230 MtrunA17_Chr8g0372711 27.933 179 119 3 310 484 286 458 3.98e-15 77.8
Msa0624230 MtrunA17_Chr5g0395381 21.930 456 302 15 51 489 27 445 4.23e-15 77.8
Msa0624230 MtrunA17_Chr7g0246121 25.000 236 167 4 258 491 248 475 4.41e-15 77.8
Msa0624230 MtrunA17_Chr5g0395331 24.138 232 162 5 260 489 258 477 5.82e-15 77.4
Msa0624230 MtrunA17_Chr2g0304871 23.982 442 290 20 89 498 71 498 6.13e-15 77.4
Msa0624230 MtrunA17_Chr3g0101831 23.628 419 287 13 88 486 67 472 6.55e-15 77.4
Msa0624230 MtrunA17_Chr4g0039391 29.310 174 119 4 320 491 306 477 6.68e-15 77.0
Msa0624230 MtrunA17_Chr8g0356001 26.457 223 147 6 266 484 265 474 7.90e-15 77.0
Msa0624230 MtrunA17_Chr4g0008101 22.042 431 285 14 89 480 71 489 8.22e-15 77.0
Msa0624230 MtrunA17_Chr5g0419691 22.785 316 231 4 171 484 160 464 1.08e-14 76.6
Msa0624230 MtrunA17_Chr5g0429651 26.894 264 165 7 266 509 251 506 1.18e-14 76.3
Msa0624230 MtrunA17_Chr3g0094231 28.902 173 117 5 317 484 299 470 1.24e-14 76.3
Msa0624230 MtrunA17_Chr7g0218601 24.631 203 145 4 282 484 273 467 1.31e-14 76.3
Msa0624230 MtrunA17_Chr5g0400421 28.655 171 112 3 318 483 298 463 1.37e-14 76.3
Msa0624230 MtrunA17_Chr2g0314731 24.710 259 175 7 257 511 244 486 1.49e-14 75.9
Msa0624230 MtrunA17_Chr5g0409051 26.374 182 127 4 309 484 299 479 1.57e-14 75.9
Msa0624230 MtrunA17_Chr4g0046681 29.651 172 116 5 313 480 26 196 2.00e-14 73.2
Msa0624230 MtrunA17_Chr3g0104351 23.039 408 257 12 137 508 127 513 2.73e-14 75.5
Msa0624230 MtrunA17_Chr1g0205371 23.671 414 276 13 99 489 75 471 2.89e-14 75.1
Msa0624230 MtrunA17_Chr7g0246131 26.275 255 178 6 239 489 229 477 3.55e-14 75.1
Msa0624230 MtrunA17_Chr4g0011901 23.256 430 300 14 74 484 46 464 3.73e-14 74.7
Msa0624230 MtrunA17_Chr4g0011871 22.877 424 279 13 90 484 61 465 4.43e-14 74.7
Msa0624230 MtrunA17_Chr2g0293411 20.764 419 290 13 81 483 68 460 6.12e-14 73.9
Msa0624230 MtrunA17_Chr1g0153371 22.434 419 283 16 77 484 56 443 8.83e-14 73.6
Msa0624230 MtrunA17_Chr6g0451691 26.122 245 157 7 249 480 260 493 1.19e-13 73.6
Msa0624230 MtrunA17_Chr4g0011941 25.749 167 121 3 320 484 3 168 1.44e-13 69.7
Msa0624230 MtrunA17_Chr5g0406651 23.404 423 277 14 90 484 62 465 1.89e-13 72.8
Msa0624230 MtrunA17_Chr5g0408181 23.303 442 284 16 82 508 59 460 2.92e-13 72.0
Msa0624230 MtrunA17_Chr3g0101591 27.108 166 118 3 321 484 42 206 3.52e-13 69.3
Msa0624230 MtrunA17_Chr6g0451641 26.582 237 163 7 249 480 252 482 5.61e-13 71.2
Msa0624230 MtrunA17_Chr4g0056951 21.394 416 275 17 77 461 62 456 5.67e-13 71.2
Msa0624230 MtrunA17_Chr6g0451741 25.820 244 158 7 249 480 279 511 5.67e-13 71.2
Msa0624230 MtrunA17_Chr6g0451811 28.659 164 112 4 321 480 8 170 6.33e-13 68.2
Msa0624230 MtrunA17_Chr1g0156081 21.508 451 309 15 85 503 83 520 7.38e-13 70.9
Msa0624230 MtrunA17_Chr3g0141801 22.768 448 295 17 79 508 67 481 7.85e-13 70.5
Msa0624230 MtrunA17_Chr7g0254641 20.842 475 328 14 58 490 20 488 1.10e-12 70.5
Msa0624230 MtrunA17_Chr2g0280261 25.000 436 287 14 79 491 51 469 2.05e-12 69.3
Msa0624230 MtrunA17_Chr2g0314781 27.624 181 120 5 334 511 1 173 2.94e-12 65.1
Msa0624230 MtrunA17_Chr4g0046661 31.148 183 120 6 305 482 11 192 4.14e-12 66.2
Msa0624230 MtrunA17_Chr1g0163401 22.477 436 259 15 127 510 103 511 5.25e-12 68.2
Msa0624230 MtrunA17_Chr4g0057001 24.514 257 183 6 242 491 239 491 5.68e-12 68.2
Msa0624230 MtrunA17_Chr5g0430041 27.419 124 89 1 365 487 23 146 1.05e-11 63.5
Msa0624230 MtrunA17_Chr2g0296651 21.990 382 251 13 133 491 111 468 1.52e-11 66.6
Msa0624230 MtrunA17_Chr5g0430151 26.613 124 90 1 365 487 23 146 1.87e-11 63.2
Msa0624230 MtrunA17_Chr5g0445371 23.967 242 146 6 251 491 1 205 2.79e-11 63.9
Msa0624230 MtrunA17_Chr7g0246181 26.016 246 169 6 244 485 235 471 3.38e-11 65.5
Msa0624230 MtrunA17_Chr4g0011921 24.051 316 209 11 187 484 162 464 4.02e-11 65.5
Msa0624230 MtrunA17_Chr3g0101541 28.906 128 89 2 365 491 1 127 4.24e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0624230 AT3G14690.1 48.919 509 245 4 12 511 10 512 0.0 531
Msa0624230 AT3G14690.2 48.919 509 245 4 12 511 45 547 0.0 530
Msa0624230 AT3G14680.1 50.202 496 232 4 25 511 23 512 0.0 522
Msa0624230 AT3G14660.1 49.395 496 236 4 25 511 23 512 7.65e-180 515
Msa0624230 AT3G14610.1 49.000 500 239 5 22 511 19 512 3.10e-177 508
Msa0624230 AT3G14640.1 48.795 498 238 5 25 511 23 514 1.21e-175 504
Msa0624230 AT3G14640.2 48.795 498 238 5 25 511 45 536 4.57e-175 504
Msa0624230 AT3G14650.1 48.589 496 240 4 25 511 23 512 1.38e-174 501
Msa0624230 AT3G14630.1 48.438 512 246 6 11 511 4 508 2.39e-174 501
Msa0624230 AT3G14630.2 48.438 512 246 6 11 511 59 563 1.12e-173 501
Msa0624230 AT3G14620.1 47.984 496 238 6 22 506 24 510 2.89e-169 488
Msa0624230 AT3G14660.2 50.986 355 163 3 162 511 18 366 1.57e-129 381
Msa0624230 AT2G26710.1 38.491 517 286 9 11 511 15 515 2.61e-127 381
Msa0624230 AT3G14660.3 45.378 357 180 4 25 372 23 373 3.35e-108 328
Msa0624230 AT2G46960.2 36.166 506 296 11 24 511 21 517 6.47e-106 326
Msa0624230 AT4G27710.1 36.327 501 288 9 30 511 29 517 5.20e-102 316
Msa0624230 AT2G46950.1 36.308 493 287 12 33 509 87 568 3.64e-100 313
Msa0624230 AT1G75130.1 34.004 497 301 9 28 511 21 503 7.18e-96 300
Msa0624230 AT5G24910.1 33.520 537 316 13 1 508 5 529 2.35e-92 291
Msa0624230 AT2G46960.1 37.922 385 220 7 137 511 26 401 1.52e-90 283
Msa0624230 AT5G52400.1 33.021 533 321 12 1 511 1 519 3.60e-88 280
Msa0624230 AT5G24900.1 32.863 496 302 11 36 508 37 524 7.82e-87 277
Msa0624230 AT5G38450.1 31.518 514 333 9 11 511 9 516 2.87e-84 270
Msa0624230 AT1G67110.1 30.097 515 334 7 10 511 9 510 1.76e-81 263
Msa0624230 AT5G24900.2 35.844 385 227 7 137 508 30 407 8.41e-81 258
Msa0624230 AT1G17060.1 33.793 290 183 4 1 282 2 290 6.30e-57 192
Msa0624230 AT2G46950.2 33.521 355 209 12 33 371 87 430 5.10e-51 180
Msa0624230 AT4G27710.2 33.333 357 202 10 30 366 29 369 2.23e-50 177
Msa0624230 AT5G24910.2 28.087 413 256 13 1 384 5 405 2.42e-40 150
Msa0624230 AT3G53130.1 24.838 463 326 11 64 510 82 538 2.69e-36 142
Msa0624230 AT5G38450.2 26.702 382 264 8 11 379 9 387 3.75e-34 133
Msa0624230 AT4G15110.1 25.676 444 250 14 104 484 124 550 9.22e-33 132
Msa0624230 AT1G67110.2 25.600 375 256 6 10 371 9 373 4.43e-31 124
Msa0624230 AT3G48310.1 23.585 424 290 14 89 495 62 468 1.22e-29 122
Msa0624230 AT1G31800.1 25.253 396 276 9 104 485 153 542 1.87e-28 119
Msa0624230 AT2G44890.1 24.879 414 268 12 103 485 80 481 3.96e-28 117
Msa0624230 AT3G48280.1 25.117 426 284 15 88 495 59 467 7.03e-28 117
Msa0624230 AT3G48270.1 23.571 420 295 12 89 495 61 467 8.10e-28 116
Msa0624230 AT2G45510.1 24.337 415 269 13 103 485 80 481 1.53e-27 116
Msa0624230 AT3G48290.1 24.350 423 283 13 89 491 63 468 1.55e-27 115
Msa0624230 AT3G48300.1 24.272 412 276 15 89 482 59 452 1.93e-27 115
Msa0624230 AT3G48300.2 24.272 412 276 15 89 482 61 454 1.97e-27 115
Msa0624230 AT4G13310.1 24.890 454 290 16 78 498 47 482 2.12e-26 112
Msa0624230 AT2G30770.1 24.194 434 287 12 84 491 54 471 4.43e-26 111
Msa0624230 AT3G48290.2 24.379 443 284 16 89 491 63 494 9.22e-26 110
Msa0624230 AT4G13290.1 24.503 453 275 18 83 498 53 475 1.91e-25 109
Msa0624230 AT5G24950.1 23.733 434 290 14 84 491 53 471 4.87e-25 108
Msa0624230 AT1G11680.1 25.215 349 229 10 151 488 135 462 5.91e-24 105
Msa0624230 AT2G44890.2 24.390 410 257 12 103 485 80 463 7.70e-24 105
Msa0624230 AT3G26125.1 23.474 426 276 13 121 508 116 529 8.15e-24 105
Msa0624230 AT1G57750.1 32.308 195 121 4 320 510 308 495 1.68e-23 103
Msa0624230 AT2G26170.1 24.948 485 285 19 76 510 65 520 2.95e-23 103
Msa0624230 AT5G23190.1 22.991 448 296 15 97 508 103 537 4.48e-23 103
Msa0624230 AT4G39510.1 33.005 203 120 5 318 510 308 504 5.78e-23 102
Msa0624230 AT5G08250.1 22.889 450 297 15 97 510 42 477 1.25e-22 101
Msa0624230 AT4G37400.1 24.651 430 284 15 73 480 45 456 1.35e-22 101
Msa0624230 AT3G26310.1 23.326 433 293 15 78 484 45 464 1.42e-22 101
Msa0624230 AT5G08250.2 22.889 450 297 15 97 510 104 539 1.55e-22 101
Msa0624230 AT5G04660.1 28.512 242 162 6 245 480 241 477 2.04e-22 100
Msa0624230 AT3G48320.1 23.877 423 290 14 89 495 62 468 3.16e-22 100
Msa0624230 AT5G52320.1 27.239 268 165 6 270 511 239 502 4.24e-22 99.8
Msa0624230 AT2G26170.2 25.108 462 270 18 99 510 2 437 6.21e-22 99.0
Msa0624230 AT3G26300.1 23.043 447 291 16 78 491 46 472 6.32e-22 99.4
Msa0624230 AT3G10560.1 27.572 243 163 6 244 480 243 478 7.17e-22 99.4
Msa0624230 AT2G21910.1 29.218 243 156 7 276 510 271 505 7.29e-22 99.4
Msa0624230 AT1G47620.1 33.000 200 125 4 318 510 317 514 7.58e-22 99.4
Msa0624230 AT1G24540.1 21.935 465 321 14 79 509 62 518 8.45e-22 99.0
Msa0624230 AT5G06900.1 22.603 438 303 15 75 491 50 472 1.02e-21 98.6
Msa0624230 AT1G13710.1 24.648 426 286 15 104 507 96 508 1.06e-21 98.6
Msa0624230 AT2G23180.1 28.621 290 181 10 239 510 230 511 1.43e-21 98.2
Msa0624230 AT4G39500.1 31.633 196 131 3 318 510 270 465 1.51e-21 97.8
Msa0624230 AT1G11610.2 23.709 426 287 13 83 487 57 465 1.66e-21 98.2
Msa0624230 AT1G11610.1 23.168 423 289 12 83 484 57 464 1.79e-21 97.8
Msa0624230 AT4G37340.1 25.845 414 258 16 105 493 79 468 2.20e-21 97.8
Msa0624230 AT4G39500.2 31.633 196 131 3 318 510 320 515 2.88e-21 97.4
Msa0624230 AT5G25120.1 23.515 421 279 15 89 484 59 461 4.29e-21 96.7
Msa0624230 AT3G26270.1 22.633 433 296 16 83 489 56 475 4.86e-21 96.7
Msa0624230 AT5G52320.2 27.481 262 160 6 270 505 239 496 5.87e-21 96.3
Msa0624230 AT3G26210.1 23.445 418 282 17 90 483 62 465 7.65e-21 95.9
Msa0624230 AT3G26320.1 22.560 461 312 15 54 484 20 465 1.11e-20 95.5
Msa0624230 AT3G25180.1 26.869 428 268 17 88 487 70 480 1.18e-20 95.5
Msa0624230 AT1G50560.1 25.223 337 214 9 192 505 184 505 1.62e-20 95.1
Msa0624230 AT4G13770.1 26.154 325 211 8 185 491 161 474 1.80e-20 94.7
Msa0624230 AT2G14100.1 24.648 426 276 13 89 487 74 481 2.25e-20 94.7
Msa0624230 AT5G02900.1 32.000 200 129 5 318 510 279 478 2.27e-20 94.4
Msa0624230 AT3G26230.1 24.027 437 288 16 83 489 50 472 2.38e-20 94.4
Msa0624230 AT3G26280.1 24.074 432 278 17 83 483 56 468 2.75e-20 94.4
Msa0624230 AT3G26280.2 24.074 432 278 17 83 483 73 485 2.98e-20 94.4
Msa0624230 AT3G26830.1 21.461 438 272 12 90 485 59 466 3.00e-20 94.0
Msa0624230 AT1G65340.1 26.154 325 196 10 203 511 207 503 3.59e-20 94.0
Msa0624230 AT5G09970.1 24.574 411 265 15 99 482 112 504 3.91e-20 94.0
Msa0624230 AT4G31500.1 25.284 352 230 12 157 489 134 471 1.05e-19 92.4
Msa0624230 AT4G36220.1 23.059 425 289 9 88 484 69 483 1.09e-19 92.4
Msa0624230 AT4G19230.1 24.263 441 283 15 82 510 60 461 1.34e-19 92.0
Msa0624230 AT4G32170.1 31.683 202 124 5 318 510 306 502 1.67e-19 92.0
Msa0624230 AT1G13100.1 21.860 430 297 15 89 491 55 472 1.86e-19 91.7
Msa0624230 AT4G15360.1 22.118 425 289 13 89 487 71 479 2.07e-19 91.7
Msa0624230 AT4G39480.1 27.801 241 155 5 286 510 275 512 4.04e-19 90.9
Msa0624230 AT2G30750.1 24.299 428 292 11 83 491 57 471 4.10e-19 90.5
Msa0624230 AT3G20950.1 25.887 282 178 8 226 487 216 486 4.96e-19 90.5
Msa0624230 AT4G19230.2 24.390 410 266 13 82 482 60 434 5.85e-19 90.1
Msa0624230 AT5G07990.1 23.799 437 295 16 77 486 47 472 6.54e-19 90.1
Msa0624230 AT1G13140.1 22.196 419 280 13 122 508 117 521 7.55e-19 90.1
Msa0624230 AT5G36220.1 24.932 365 237 14 143 491 129 472 8.20e-19 89.7
Msa0624230 AT3G20935.1 24.710 259 174 5 249 487 51 308 8.29e-19 88.2
Msa0624230 AT5G47990.1 23.202 431 288 17 79 480 59 475 1.04e-18 89.4
Msa0624230 AT3G10570.1 26.271 236 164 5 250 480 248 478 1.20e-18 89.4
Msa0624230 AT3G44250.1 21.028 428 306 14 79 484 48 465 1.40e-18 89.0
Msa0624230 AT1G11600.1 26.246 301 200 10 210 493 194 489 1.78e-18 89.0
Msa0624230 AT4G15330.2 25.417 240 162 5 254 487 220 448 2.21e-18 88.2
Msa0624230 AT1G34540.1 22.851 442 294 17 99 510 72 496 2.64e-18 88.2
Msa0624230 AT4G15330.1 25.417 240 162 5 254 487 248 476 2.92e-18 88.2
Msa0624230 AT5G04630.1 28.205 234 157 7 253 480 246 474 3.20e-18 87.8
Msa0624230 AT1G13140.2 22.333 403 273 12 122 508 117 495 3.34e-18 87.8
Msa0624230 AT5G63450.1 23.235 439 284 16 104 510 84 501 3.52e-18 87.8
Msa0624230 AT5G63450.2 23.235 439 284 16 104 510 142 559 4.17e-18 87.8
Msa0624230 AT4G12320.1 27.586 261 172 8 252 509 254 500 4.56e-18 87.4
Msa0624230 AT1G50520.1 25.321 312 208 9 192 487 183 485 4.61e-18 87.4
Msa0624230 AT4G39490.1 29.907 214 124 6 318 510 307 515 5.47e-18 87.4
Msa0624230 AT1G13090.2 21.889 434 299 13 89 497 58 476 5.68e-18 87.0
Msa0624230 AT4G15380.1 23.767 446 293 14 89 506 73 499 5.68e-18 87.4
Msa0624230 AT4G37430.1 22.863 468 307 17 50 483 15 462 8.15e-18 86.7
Msa0624230 AT3G20130.2 29.050 179 114 4 318 487 280 454 1.03e-17 86.3
Msa0624230 AT2G40890.1 22.271 458 315 12 50 480 16 459 1.07e-17 86.3
Msa0624230 AT5G35715.1 22.059 408 287 14 99 485 6 403 1.11e-17 85.9
Msa0624230 AT1G13150.1 22.302 417 282 13 122 508 110 514 1.38e-17 86.3
Msa0624230 AT2G25160.1 24.551 334 221 10 179 491 165 488 1.44e-17 85.9
Msa0624230 AT3G20120.4 21.319 455 314 16 81 505 60 500 1.54e-17 85.9
Msa0624230 AT3G20130.1 29.050 179 114 4 318 487 308 482 1.63e-17 85.9
Msa0624230 AT4G12310.1 27.203 261 173 8 252 509 256 502 1.75e-17 85.9
Msa0624230 AT2G27690.1 23.902 410 254 14 104 480 76 460 1.85e-17 85.5
Msa0624230 AT3G20940.1 25.681 257 175 7 238 487 236 483 2.04e-17 85.5
Msa0624230 AT5G36220.2 26.032 315 198 12 192 491 32 326 2.16e-17 84.3
Msa0624230 AT2G27010.1 20.331 423 301 10 82 487 55 458 2.28e-17 85.1
Msa0624230 AT3G20140.1 23.358 274 191 7 226 487 212 478 2.40e-17 85.1
Msa0624230 AT5G10600.1 22.921 445 260 17 83 483 71 476 2.56e-17 85.1
Msa0624230 AT1G63710.1 22.273 440 294 12 104 510 82 506 3.15e-17 85.1
Msa0624230 AT3G20120.2 26.904 197 134 5 317 505 170 364 3.19e-17 84.0
Msa0624230 AT3G20120.3 26.904 197 134 5 317 505 170 364 3.19e-17 84.0
Msa0624230 AT3G20120.1 26.904 197 134 5 317 505 170 364 3.19e-17 84.0
Msa0624230 AT2G24180.1 23.414 457 300 20 78 502 51 489 3.23e-17 84.7
Msa0624230 AT4G20240.1 24.416 385 252 16 75 437 49 416 3.37e-17 84.3
Msa0624230 AT5G25140.1 22.727 418 286 14 89 484 59 461 4.35e-17 84.3
Msa0624230 AT1G64930.1 28.272 191 130 4 309 493 299 488 4.78e-17 84.3
Msa0624230 AT5G24960.1 24.036 441 280 16 84 491 54 472 6.94e-17 84.0
Msa0624230 AT5G10610.1 27.500 240 153 8 252 483 234 460 7.74e-17 83.6
Msa0624230 AT1G13080.2 21.656 314 213 8 192 484 50 351 9.50e-17 82.4
Msa0624230 AT2G46660.1 24.020 408 263 17 99 482 113 497 1.03e-16 83.6
Msa0624230 AT4G12300.1 25.758 264 181 7 249 509 247 498 1.73e-16 82.8
Msa0624230 AT1G13080.1 21.656 314 213 8 192 484 168 469 2.62e-16 82.0
Msa0624230 AT1G64940.1 26.904 197 139 4 306 498 298 493 2.81e-16 82.0
Msa0624230 AT4G15350.1 21.900 379 265 11 130 487 108 476 2.82e-16 82.0
Msa0624230 AT3G26160.1 22.038 422 281 17 78 466 45 451 4.66e-16 81.3
Msa0624230 AT5G04330.1 25.391 256 174 6 239 484 224 472 4.77e-16 81.3
Msa0624230 AT3G26200.1 23.325 403 272 16 84 461 53 443 5.07e-16 81.3
Msa0624230 AT2G45550.1 25.912 274 182 9 238 499 231 495 5.15e-16 81.3
Msa0624230 AT2G27000.1 21.991 432 299 13 82 486 59 479 6.09e-16 80.9
Msa0624230 AT2G45970.1 21.924 447 290 14 104 510 82 509 6.14e-16 80.9
Msa0624230 AT3G20110.1 22.831 438 307 13 83 502 64 488 1.08e-15 80.1
Msa0624230 AT5G25180.1 22.542 417 288 14 89 484 59 461 1.08e-15 80.1
Msa0624230 AT2G45570.1 25.175 286 189 11 238 507 231 507 1.22e-15 80.1
Msa0624230 AT1G28430.1 24.291 247 168 5 249 487 245 480 1.27e-15 80.1
Msa0624230 AT5G42580.1 23.323 313 221 7 201 505 186 487 1.35e-15 79.7
Msa0624230 AT1G13110.1 21.053 418 294 12 88 480 61 467 1.64e-15 79.7
Msa0624230 AT4G37310.1 22.967 418 280 14 104 493 77 480 1.79e-15 79.3
Msa0624230 AT3G20100.1 24.898 245 170 5 249 487 246 482 2.03e-15 79.3
Msa0624230 AT4G00360.1 24.229 454 272 18 104 510 82 510 2.84e-15 79.0
Msa0624230 AT4G37370.1 23.729 354 229 12 143 478 122 452 3.48e-15 78.6
Msa0624230 AT5G25900.1 26.210 248 166 5 239 484 247 479 3.80e-15 78.6
Msa0624230 AT3G61040.1 22.637 455 302 15 64 483 24 463 4.40e-15 78.2
Msa0624230 AT3G20960.1 23.750 320 216 9 177 487 78 378 4.50e-15 77.8
Msa0624230 AT3G26190.1 21.678 429 299 16 84 488 53 468 5.97e-15 77.8
Msa0624230 AT3G20960.2 23.750 320 216 9 177 487 181 481 6.33e-15 77.8
Msa0624230 AT1G33730.1 25.703 249 160 8 247 484 105 339 7.08e-15 76.6
Msa0624230 AT1G33730.2 25.703 249 160 8 247 484 105 339 7.08e-15 76.6
Msa0624230 AT1G74550.1 27.807 187 132 3 306 490 271 456 7.65e-15 77.4
Msa0624230 AT4G37410.1 22.738 431 287 18 75 480 47 456 7.83e-15 77.4
Msa0624230 AT1G01600.1 22.991 448 287 18 104 510 82 512 8.43e-15 77.4
Msa0624230 AT3G03470.1 27.723 202 132 5 292 480 275 475 1.18e-14 77.0
Msa0624230 AT2G45580.2 26.374 182 132 2 304 484 142 322 2.02e-14 75.1
Msa0624230 AT2G45580.1 26.374 182 132 2 304 484 296 476 2.64e-14 75.9
Msa0624230 AT4G37330.1 23.958 384 239 17 124 483 101 455 2.78e-14 75.5
Msa0624230 AT2G12190.1 24.296 284 170 9 253 502 240 512 3.12e-14 75.5
Msa0624230 AT1G64950.1 26.336 262 168 8 253 498 240 492 4.27e-14 75.1
Msa0624230 AT3G53300.1 20.690 435 304 16 79 486 48 468 4.44e-14 75.1
Msa0624230 AT2G42250.1 25.084 299 195 11 202 480 188 477 4.59e-14 75.1
Msa0624230 AT4G37360.1 30.688 189 120 6 309 493 287 468 6.81e-14 74.3
Msa0624230 AT1G33720.1 25.620 242 162 7 247 484 248 475 6.96e-14 74.3
Msa0624230 AT1G33720.4 25.620 242 162 7 247 484 116 343 6.96e-14 73.9
Msa0624230 AT1G33720.3 25.620 242 162 7 247 484 116 343 6.96e-14 73.9
Msa0624230 AT1G33720.5 25.620 242 162 7 247 484 116 343 6.96e-14 73.9
Msa0624230 AT4G12330.1 23.112 437 284 18 77 483 64 478 7.80e-14 74.3
Msa0624230 AT3G26150.1 21.986 423 292 18 89 486 60 469 8.41e-14 74.3
Msa0624230 AT4G13310.2 24.033 362 227 15 78 409 47 390 1.54e-13 72.8
Msa0624230 AT1G33720.2 25.000 256 171 7 247 484 116 368 1.77e-13 72.8
Msa0624230 AT5G42590.1 23.986 296 206 7 198 482 175 462 5.13e-13 71.6
Msa0624230 AT5G06905.1 26.122 245 157 7 260 487 245 482 5.46e-13 71.6
Msa0624230 AT3G50660.1 26.000 250 153 6 277 511 280 512 9.02e-13 70.9
Msa0624230 AT5G25130.1 21.053 437 303 15 90 503 60 477 9.48e-13 70.9
Msa0624230 AT1G74540.1 25.962 208 143 4 285 482 248 454 1.08e-12 70.9
Msa0624230 AT2G29090.2 23.649 444 287 17 81 508 72 479 2.12e-12 69.7
Msa0624230 AT2G29090.1 23.649 444 287 17 81 508 72 479 2.12e-12 69.7
Msa0624230 AT1G16410.1 22.750 400 262 15 139 502 133 521 2.23e-12 69.7
Msa0624230 AT3G19270.1 22.170 424 280 14 77 486 55 442 3.03e-12 68.9
Msa0624230 AT3G19270.2 22.014 427 283 14 77 489 55 445 3.50e-12 68.9
Msa0624230 AT3G53280.1 21.445 429 294 18 83 484 52 464 3.97e-12 68.9
Msa0624230 AT2G23220.1 25.379 264 171 8 239 496 247 490 4.34e-12 68.9
Msa0624230 AT3G26220.1 22.706 436 295 16 83 489 53 475 4.29e-11 65.5
Msa0624230 AT4G20240.2 23.120 359 237 16 75 411 49 390 6.53e-11 64.7
Msa0624230 AT1G55940.1 25.592 211 143 5 277 480 260 463 8.06e-11 64.7

Find 160 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCATCATGATTTGGATTT+TGG 0.086543 4_3:-2203898 None:intergenic
TGGCCAAAACTTTGCCTTAT+TGG 0.137774 4_3:+2204678 Msa0624230:CDS
ATTCCTCCAGAGAACCTTTC+TGG 0.180535 4_3:-2204592 None:intergenic
CTTGCACGTTCTTGCCATTC+AGG 0.181436 4_3:-2203848 None:intergenic
AACACTTGTTTGATTTGTTC+AGG 0.218844 4_3:-2202983 None:intergenic
AAGTGCTTCAATCTTGTTTC+GGG 0.220616 4_3:-2205205 None:intergenic
AAACAAGATTGAAGCACTTT+TGG 0.249940 4_3:+2205209 Msa0624230:three_prime_UTR
TAATTGCTATTATTCCTCTA+TGG 0.251897 4_3:+2201664 Msa0624230:CDS
TGCATCTGATACCAGCTTAT+TGG 0.260225 4_3:-2205152 None:intergenic
CCACTGCATCTTTGTTAGTT+TGG 0.268150 4_3:+2203801 Msa0624230:CDS
TACTACTTTGGCTTCCAATA+AGG 0.270487 4_3:-2204692 None:intergenic
TAAGTGTTTGTGATAATTTC+TGG 0.276293 4_3:+2204995 Msa0624230:three_prime_UTR
GCCATCAATGATGATTTATT+AGG 0.288793 4_3:+2203659 Msa0624230:CDS
CGGATCTTAGCCCCGTGTTT+TGG 0.297729 4_3:-2204796 None:intergenic
CTAGCAGAGAGCATCTTTCT+AGG 0.300146 4_3:-2205374 None:intergenic
CACTTTCACCAGCTACCTTC+TGG 0.302879 4_3:+2201628 Msa0624230:CDS
GCCCTTCCCCTAGGGTTTCC+TGG 0.304738 4_3:+2205403 Msa0624230:three_prime_UTR
GGTATCAAATGGTTTGGATT+TGG 0.312604 4_3:-2201811 None:intergenic
AGTTTGGACAATGGTGTTAT+TGG 0.316922 4_3:+2203817 Msa0624230:CDS
TTCACCATGACTGTGATATA+TGG 0.320687 4_3:+2204545 Msa0624230:CDS
TGACTTAACCCATCATGATT+TGG 0.331413 4_3:-2203905 None:intergenic
TGTTGCCATACCGATACTTT+TGG 0.340038 4_3:+2204522 Msa0624230:CDS
TGAAAGGAACAAAGAGCTTT+TGG 0.347634 4_3:+2201520 Msa0624230:five_prime_UTR
TTTCATGACCTTGAATTTCA+AGG 0.352446 4_3:-2203703 None:intergenic
GAGGGAATGGGATTGGCATT+TGG 0.353703 4_3:+2204926 Msa0624230:three_prime_UTR
ACCACAAGGAATTCAGCTTC+TGG 0.357033 4_3:-2201692 None:intergenic
CATAAGGAACACAACAAGTA+TGG 0.359877 4_3:+2201602 Msa0624230:exon
GCCTAATAAATCATCATTGA+TGG 0.373911 4_3:-2203660 None:intergenic
ATTTGATCTTATAAGATTGC+AGG 0.376123 4_3:+2203405 Msa0624230:CDS
GTTGGAGGTATCAAATGGTT+TGG 0.384202 4_3:-2201817 None:intergenic
GGGTCCGCGATGATCACTTT+TGG 0.384929 4_3:-2202962 None:intergenic
TTATTCCTGCAGGTAGTGAT+AGG 0.388666 4_3:-2204498 None:intergenic
AAAGTGCTTCAATCTTGTTT+CGG 0.396476 4_3:-2205206 None:intergenic
CACCAAACTGTCCGAAAATA+CGG 0.402573 4_3:+2201870 Msa0624230:CDS
CGTTGGATTAGTAAGTTATG+AGG 0.413311 4_3:+2203063 Msa0624230:CDS
TGATCAGCTGTTAGTTGCTC+TGG 0.414249 4_3:+2205427 Msa0624230:three_prime_UTR
CTAAGAGCACAAGGTCTTCA+AGG 0.414544 4_3:+2201741 Msa0624230:CDS
TTAGTTGGTATTATTTAGTA+AGG 0.416431 4_3:+2205116 Msa0624230:three_prime_UTR
TCCATTTGCTAATCATATCA+TGG 0.418520 4_3:-2203261 None:intergenic
GGACAATGGTGTTATTGGCT+AGG 0.425719 4_3:+2203822 Msa0624230:CDS
TGTAAGCAATTCTACATTGC+AGG 0.427094 4_3:+2203770 Msa0624230:CDS
TAGGGTTTCGCCCTTCCCCT+AGG 0.429665 4_3:+2205394 Msa0624230:three_prime_UTR
GCGATTTCTAGAACAGCATT+TGG 0.431431 4_3:+2203355 Msa0624230:CDS
AATTGCTATTATTCCTCTAT+GGG 0.434472 4_3:+2201665 Msa0624230:CDS
TTTAAACCAGAAAGGTTCTC+TGG 0.435887 4_3:+2204586 Msa0624230:CDS
GAGATTTATGATTTAGTCGA+GGG 0.436844 4_3:+2203596 Msa0624230:CDS
ATACACGAAGTCCGATGAAA+TGG 0.438094 4_3:+2203443 Msa0624230:CDS
CCTTTCATTCAAAACTTGAC+TGG 0.439251 4_3:+2203328 Msa0624230:CDS
TACCTACAAGTTCCAACAAA+AGG 0.441178 4_3:+2203555 Msa0624230:CDS
AATGGAATCGAACTTTGGTT+TGG 0.442194 4_3:-2203026 None:intergenic
ATTGCTAAGTGTTTGTTCGT+TGG 0.444747 4_3:+2203046 Msa0624230:CDS
CTTCCAATAAGGCAAAGTTT+TGG 0.453837 4_3:-2204681 None:intergenic
AATTTATCAATGTGAAATGC+AGG 0.455594 4_3:-2203121 None:intergenic
GATGGCTTCTCCATTGTCCA+TGG 0.458759 4_3:-2203642 None:intergenic
TATACAAAGTAAGATGGAAA+AGG 0.465890 4_3:-2205029 None:intergenic
GTTCTAGGACCCCATCCAAA+TGG 0.468767 4_3:-2204649 None:intergenic
TCACCATGACTGTGATATAT+GGG 0.470077 4_3:+2204546 Msa0624230:CDS
TCAAATAACCTTGAAATTCA+AGG 0.470347 4_3:+2203695 Msa0624230:CDS
ATCATATCTCTAAAGTCATA+AGG 0.471419 4_3:+2201586 Msa0624230:five_prime_UTR
TAGTATTGCATGTGTATGTT+AGG 0.476192 4_3:+2204882 Msa0624230:three_prime_UTR
AAGTAGTGACATTACTACTT+TGG 0.476599 4_3:-2204704 None:intergenic
AATGATATGATGTACAAATC+CGG 0.478746 4_3:-2205314 None:intergenic
GAAGACATCAAACAATTGTA+TGG 0.482962 4_3:-2205255 None:intergenic
TAGCAGAGAGCATCTTTCTA+GGG 0.484708 4_3:-2205373 None:intergenic
ACACTTGTTTGATTTGTTCA+GGG 0.486748 4_3:-2202982 None:intergenic
CAAAAGAGTTTAAACCAGAA+AGG 0.488467 4_3:+2204578 Msa0624230:CDS
AACCAAAATCCAAATCATGA+TGG 0.488741 4_3:+2203896 Msa0624230:CDS
GAATAAAACAAGAGAGGGAA+TGG 0.491470 4_3:+2204913 Msa0624230:three_prime_UTR
CAAAGACATCCATACAGAAA+AGG 0.491499 4_3:-2205347 None:intergenic
TTTGGCAGCAGCTATGTAGC+AGG 0.491976 4_3:+2203373 Msa0624230:CDS
TTGATTAGTACTTGGTTGGT+TGG 0.492966 4_3:+2204949 Msa0624230:three_prime_UTR
CTAGAAAGATGCTCTCTGCT+AGG 0.493439 4_3:+2205375 Msa0624230:three_prime_UTR
GCCAGGAAACCCTAGGGGAA+GGG 0.493682 4_3:-2205404 None:intergenic
TTAGCAATGGAATCGAACTT+TGG 0.494174 4_3:-2203031 None:intergenic
ATAGAATATACAAAGTAAGA+TGG 0.494392 4_3:-2205035 None:intergenic
AACAAGAGAGGGAATGGGAT+TGG 0.495412 4_3:+2204919 Msa0624230:three_prime_UTR
TATTGGCTAGGTTTCCTGAA+TGG 0.499274 4_3:+2203834 Msa0624230:CDS
TTCTAGGACCCCATCCAAAT+GGG 0.504793 4_3:-2204648 None:intergenic
GGAATTGCAAAGGCCACAAA+AGG 0.506652 4_3:+2204610 Msa0624230:CDS
GTAAGAATCCAGAAGGTAGC+TGG 0.508985 4_3:-2201636 None:intergenic
CTTTCTTTGCAGCCAAAACA+CGG 0.514214 4_3:+2204784 Msa0624230:CDS
ACATCGTTGGAGGTATCAAA+TGG 0.514681 4_3:-2201822 None:intergenic
GCCATGATATGATTAGCAAA+TGG 0.516109 4_3:+2203260 Msa0624230:CDS
TGATTTATTAGGCTTACTGA+TGG 0.517189 4_3:+2203670 Msa0624230:CDS
ATGGCAACATTTATTCCTGC+AGG 0.519108 4_3:-2204508 None:intergenic
CTGTTGGTGGATATAATCTC+AGG 0.519172 4_3:-2204432 None:intergenic
AGGGTTTCGCCCTTCCCCTA+GGG 0.522263 4_3:+2205395 Msa0624230:three_prime_UTR
TTGGTTGGTTGGTCAAGACT+AGG 0.523367 4_3:+2204960 Msa0624230:three_prime_UTR
TAGAAAGATGCTCTCTGCTA+GGG 0.526241 4_3:+2205376 Msa0624230:three_prime_UTR
AAGTTATGAGGGTGACGAAT+GGG 0.526252 4_3:+2203075 Msa0624230:CDS
TCTCAGAGAGTTAAGTTACA+AGG 0.526310 4_3:-2205065 None:intergenic
GCATTTGGTTGATTAGTACT+TGG 0.526595 4_3:+2204941 Msa0624230:three_prime_UTR
CTGATCAGCCAGGAAACCCT+AGG 0.528111 4_3:-2205411 None:intergenic
TTTCTTTGCAGCCAAAACAC+GGG 0.530148 4_3:+2204785 Msa0624230:CDS
GTTGGATTAGTAAGTTATGA+GGG 0.532684 4_3:+2203064 Msa0624230:CDS
TTTGATCTTATAAGATTGCA+GGG 0.533158 4_3:+2203406 Msa0624230:CDS
ATTTATCAATGTGAAATGCA+GGG 0.533762 4_3:-2203120 None:intergenic
GATCTGTGGCGCAACATCGT+TGG 0.535279 4_3:-2201835 None:intergenic
TCTTTGTCTTACCATTTCAT+CGG 0.535987 4_3:-2203454 None:intergenic
CATGAAAAGAGTAAGACAGC+TGG 0.540594 4_3:+2203719 Msa0624230:CDS
AGAGATTTATGATTTAGTCG+AGG 0.542148 4_3:+2203595 Msa0624230:CDS
ACCAAAATCCAAATCATGAT+GGG 0.542219 4_3:+2203897 Msa0624230:CDS
TCCAGAAGCTGAATTCCTTG+TGG 0.542304 4_3:+2201691 Msa0624230:CDS
CGAACTAAGAAAACTGTTGG+TGG 0.543941 4_3:-2204445 None:intergenic
TTGGTTGATTAGTACTTGGT+TGG 0.545897 4_3:+2204945 Msa0624230:three_prime_UTR
CAACTAACAGCTGATCAGCC+AGG 0.548592 4_3:-2205421 None:intergenic
GCAAATGCCAACCAATAAGC+TGG 0.551839 4_3:+2205141 Msa0624230:three_prime_UTR
ATGATGTTAACTGTATGAAT+AGG 0.553956 4_3:+2205232 Msa0624230:three_prime_UTR
TTAGAGATATGATATGATGA+TGG 0.554767 4_3:-2201576 None:intergenic
AGCCAGGAAACCCTAGGGGA+AGG 0.556455 4_3:-2205405 None:intergenic
CGAGAGAAAGCCATGGACAA+TGG 0.556873 4_3:+2203632 Msa0624230:CDS
CTGTGGCGCAACATCGTTGG+AGG 0.565671 4_3:-2201832 None:intergenic
AATAAAACAAGAGAGGGAAT+GGG 0.566655 4_3:+2204914 Msa0624230:three_prime_UTR
TAATTTATTGATAAAACTCA+CGG 0.567068 4_3:-2205096 None:intergenic
TTATTTACAGAATATGCTAC+CGG 0.570816 4_3:+2203222 Msa0624230:intron
ATCTTTGTTAGTTTGGACAA+TGG 0.573101 4_3:+2203808 Msa0624230:CDS
AAGTTCCAACAAAAGGATGA+AGG 0.573312 4_3:+2203562 Msa0624230:CDS
GTGGTTGAGACCAAAGAGGT+TGG 0.578237 4_3:+2201710 Msa0624230:CDS
GTGAACCAAAAGTATCGGTA+TGG 0.578316 4_3:-2204527 None:intergenic
AACGAACAAACACTTAGCAA+TGG 0.579121 4_3:-2203044 None:intergenic
GCTCGAACTAAGAAAACTGT+TGG 0.579739 4_3:-2204448 None:intergenic
CTGAATGGCAAGAACGTGCA+AGG 0.583115 4_3:+2203849 Msa0624230:CDS
TCTGATACCAGCTTATTGGT+TGG 0.588070 4_3:-2205148 None:intergenic
TCATGGTGAACCAAAAGTAT+CGG 0.588312 4_3:-2204532 None:intergenic
TGATATGATTAGCAAATGGA+AGG 0.592903 4_3:+2203264 Msa0624230:CDS
TGGGGTCCTAGAACATGCAT+TGG 0.593187 4_3:+2204658 Msa0624230:CDS
AGCTTCTGGAAAGCCCATAG+AGG 0.593604 4_3:-2201678 None:intergenic
TAAGTTATGAGGGTGACGAA+TGG 0.597722 4_3:+2203074 Msa0624230:CDS
TGATCAGCCAGGAAACCCTA+GGG 0.600388 4_3:-2205410 None:intergenic
ATCACAGAGATGAGGTGAGG+AGG 0.603195 4_3:-2205479 None:intergenic
TGGCTGCTTTGAATAAATGC+CGG 0.607297 4_3:-2203241 None:intergenic
AAGCCGAATAAAACAAGAGA+GGG 0.612827 4_3:+2204908 Msa0624230:three_prime_UTR
CCTTGTGGTTGAGACCAAAG+AGG 0.614349 4_3:+2201706 Msa0624230:CDS
GGAAACCTATCACTACCTGC+AGG 0.614488 4_3:+2204493 Msa0624230:CDS
AATCATGTGAGATTGATGTC+CGG 0.615391 4_3:+2203305 Msa0624230:CDS
TGCAAAGAAAGGATAGCAGT+GGG 0.620612 4_3:-2204772 None:intergenic
ATGATGGAGAAGACGTATTG+TGG 0.624640 4_3:-2201560 None:intergenic
CACCCCATATATCACAGTCA+TGG 0.625790 4_3:-2204549 None:intergenic
CATGCTTATAGTCTGCAGAA+AGG 0.626291 4_3:-2204747 None:intergenic
CTGCAAAGAAAGGATAGCAG+TGG 0.631280 4_3:-2204773 None:intergenic
AAACCAGAAAGGTTCTCTGG+AGG 0.634600 4_3:+2204589 Msa0624230:CDS
CCAAACTAACAAAGATGCAG+TGG 0.635378 4_3:-2203801 None:intergenic
TTCTTTGCAGCCAAAACACG+GGG 0.635892 4_3:+2204786 Msa0624230:CDS
TTGGCAGCAGCTATGTAGCA+GGG 0.636138 4_3:+2203374 Msa0624230:CDS
GAAAAGCTTCTAAGAGCACA+AGG 0.638368 4_3:+2201732 Msa0624230:CDS
TATGACTGTAAGAATCCAGA+AGG 0.644150 4_3:-2201643 None:intergenic
CCTCTTTGGTCTCAACCACA+AGG 0.644752 4_3:-2201706 None:intergenic
GTTCTCTGGAGGAATTGCAA+AGG 0.650068 4_3:+2204600 Msa0624230:CDS
AGCAGAGAGCATCTTTCTAG+GGG 0.653283 4_3:-2205372 None:intergenic
TAAAATACGAGAGAAAGCCA+TGG 0.657399 4_3:+2203625 Msa0624230:CDS
CAAGCCGAATAAAACAAGAG+AGG 0.664051 4_3:+2204907 Msa0624230:three_prime_UTR
CAGGACCTCATATAAAACCA+TGG 0.671962 4_3:-2204413 None:intergenic
AAGGAACACAACAAGTATGG+AGG 0.684445 4_3:+2201605 Msa0624230:exon
TTGATCTTATAAGATTGCAG+GGG 0.692148 4_3:+2203407 Msa0624230:CDS
AGGTCACTATCACAGAGATG+AGG 0.693603 4_3:-2205487 None:intergenic
CACCATGACTGTGATATATG+GGG 0.697286 4_3:+2204547 Msa0624230:CDS
ACTATCACAGAGATGAGGTG+AGG 0.698142 4_3:-2205482 None:intergenic
TGTACGAATGAAAAGATCTG+TGG 0.746082 4_3:-2201849 None:intergenic
GATCAGCCAGGAAACCCTAG+GGG 0.757604 4_3:-2205409 None:intergenic
AATACCAAAAGTGATCATCG+CGG 0.799523 4_3:+2202958 Msa0624230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAGAAAAATTATAATATAA+TGG - chr4_3:2201498-2201517 None:intergenic 10.0%
!!! AAACATATTTTTTTTTTTGA+AGG - chr4_3:2202024-2202043 None:intergenic 10.0%
!!! TTTTTTAACATAAAATATGT+TGG + chr4_3:2204267-2204286 Msa0624230:intron 10.0%
!!! TTTTTAACATAAAATATGTT+GGG + chr4_3:2204268-2204287 Msa0624230:intron 10.0%
!!! GTAAAAAAAAATTTAAAACT+TGG + chr4_3:2204472-2204491 Msa0624230:CDS 10.0%
!! GAAAAATTATAATATAATGG+TGG - chr4_3:2201495-2201514 None:intergenic 15.0%
!!! ATAAATATATACCGTATTTT+CGG - chr4_3:2201884-2201903 None:intergenic 15.0%
!! AAAATACGGTATATATTTAT+AGG + chr4_3:2201884-2201903 Msa0624230:intron 15.0%
!!! ATGTTAACTTTTTGTTTTTT+GGG + chr4_3:2201974-2201993 Msa0624230:intron 15.0%
!!! TAAACAAATATTTTTACAGA+AGG - chr4_3:2202076-2202095 None:intergenic 15.0%
!!! ATTTGAAGATTTTTTGATTT+TGG + chr4_3:2202111-2202130 Msa0624230:intron 15.0%
!!! AATTTGAAATTTTTTGGTTT+TGG - chr4_3:2202283-2202302 None:intergenic 15.0%
!!! ATCTAAACAATTTTTTTTAC+AGG + chr4_3:2202314-2202333 Msa0624230:intron 15.0%
!!! TCTAAACAATTTTTTTTACA+GGG + chr4_3:2202315-2202334 Msa0624230:intron 15.0%
!! TTTGCTTATAAAAAAACTAT+GGG - chr4_3:2202384-2202403 None:intergenic 15.0%
!! ATTTGCTTATAAAAAAACTA+TGG - chr4_3:2202385-2202404 None:intergenic 15.0%
!!! TCACATAAATTTTATAGAAT+TGG - chr4_3:2202569-2202588 None:intergenic 15.0%
!! TAAATAATGATGACTAAATT+TGG - chr4_3:2204065-2204084 None:intergenic 15.0%
!!! TTTTAACATAAAATATGTTG+GGG + chr4_3:2204269-2204288 Msa0624230:intron 15.0%
!!! TCAAAAGTTGATATATTTAT+AGG + chr4_3:2204326-2204345 Msa0624230:intron 15.0%
!! TATCAAAAAATTGTTACATT+TGG + chr4_3:2204835-2204854 Msa0624230:three_prime_UTR 15.0%
!! TAATTTATTGATAAAACTCA+CGG - chr4_3:2205099-2205118 None:intergenic 15.0%
!!! AGTTTTATCAATAAATTAGT+TGG + chr4_3:2205101-2205120 Msa0624230:three_prime_UTR 15.0%
!! AAAATATTGTCTTCAAGTAA+AGG - chr4_3:2201936-2201955 None:intergenic 20.0%
!!! CATGTTAACTTTTTGTTTTT+TGG + chr4_3:2201973-2201992 Msa0624230:intron 20.0%
!!! TTTTTTTTGAAGGATTACAA+GGG - chr4_3:2202014-2202033 None:intergenic 20.0%
!!! TTTTTTTTTGAAGGATTACA+AGG - chr4_3:2202015-2202034 None:intergenic 20.0%
!! AAACCGAAATATTAATGATA+TGG - chr4_3:2202214-2202233 None:intergenic 20.0%
!!! CCATGTAATTTGAAATTTTT+TGG - chr4_3:2202289-2202308 None:intergenic 20.0%
!! CCAAAAAATTTCAAATTACA+TGG + chr4_3:2202286-2202305 Msa0624230:intron 20.0%
!! AAAATTTCAAATTACATGGT+TGG + chr4_3:2202290-2202309 Msa0624230:intron 20.0%
!!! ATTTTTTTTACAGGGTAAAT+CGG + chr4_3:2202323-2202342 Msa0624230:intron 20.0%
!!! TTTTCTATCACTAAATCTAA+TGG + chr4_3:2202515-2202534 Msa0624230:intron 20.0%
!!! AGTTTTGTTTGAGAAATTTT+AGG - chr4_3:2202831-2202850 None:intergenic 20.0%
!! CAAGTGATGTTAATTATTTA+GGG - chr4_3:2203511-2203530 None:intergenic 20.0%
!! TCAAGTGATGTTAATTATTT+AGG - chr4_3:2203512-2203531 None:intergenic 20.0%
!! TAGTCATCATTATTTAACAA+TGG + chr4_3:2204069-2204088 Msa0624230:intron 20.0%
!!! GATACCTTTAAGATATATTA+AGG + chr4_3:2204139-2204158 Msa0624230:intron 20.0%
!!! AGTTATAAGAAAGTTTTTGT+TGG + chr4_3:2204297-2204316 Msa0624230:intron 20.0%
!!! GTTATAAGAAAGTTTTTGTT+GGG + chr4_3:2204298-2204317 Msa0624230:intron 20.0%
!! ATAGAATATACAAAGTAAGA+TGG - chr4_3:2205038-2205057 None:intergenic 20.0%
!!! TTAGTTGGTATTATTTAGTA+AGG + chr4_3:2205116-2205135 Msa0624230:three_prime_UTR 20.0%
!! TATAATTTTTCTTGCGTGAA+AGG + chr4_3:2201504-2201523 Msa0624230:five_prime_UTR 25.0%
! TTAGAGATATGATATGATGA+TGG - chr4_3:2201579-2201598 None:intergenic 25.0%
!!! ATCATATCTCTAAAGTCATA+AGG + chr4_3:2201586-2201605 Msa0624230:five_prime_UTR 25.0%
!! TAATTGCTATTATTCCTCTA+TGG + chr4_3:2201664-2201683 Msa0624230:CDS 25.0%
!! AATTGCTATTATTCCTCTAT+GGG + chr4_3:2201665-2201684 Msa0624230:CDS 25.0%
! TAGAAATCGCTAATATTACA+AGG - chr4_3:2202048-2202067 None:intergenic 25.0%
! TTTGTAATTTGATGTCATGA+AGG - chr4_3:2202138-2202157 None:intergenic 25.0%
! TGAAATTCTCTCAAATTACA+AGG - chr4_3:2202179-2202198 None:intergenic 25.0%
! GAAATATTAATGATATGGCA+GGG - chr4_3:2202209-2202228 None:intergenic 25.0%
! CTGCCATATCATTAATATTT+CGG + chr4_3:2202208-2202227 Msa0624230:intron 25.0%
!!! TACTTCATGTTGATTTGATA+TGG - chr4_3:2202749-2202768 None:intergenic 25.0%
!! AACTATCTAGAATGATACTA+TGG + chr4_3:2202847-2202866 Msa0624230:intron 25.0%
!! ACTATCTAGAATGATACTAT+GGG + chr4_3:2202848-2202867 Msa0624230:intron 25.0%
! CTAATGAATAATTGATGTGT+AGG + chr4_3:2202908-2202927 Msa0624230:intron 25.0%
! ATTTATCAATGTGAAATGCA+GGG - chr4_3:2203123-2203142 None:intergenic 25.0%
! AATTTATCAATGTGAAATGC+AGG - chr4_3:2203124-2203143 None:intergenic 25.0%
! ACATTGATAAATTGAGAGTA+AGG + chr4_3:2203131-2203150 Msa0624230:intron 25.0%
! GCATATTCTGTAAATAAGTT+AGG - chr4_3:2203219-2203238 None:intergenic 25.0%
! TTATTTACAGAATATGCTAC+CGG + chr4_3:2203222-2203241 Msa0624230:intron 25.0%
! ATTTGATCTTATAAGATTGC+AGG + chr4_3:2203405-2203424 Msa0624230:CDS 25.0%
! TTTGATCTTATAAGATTGCA+GGG + chr4_3:2203406-2203425 Msa0624230:CDS 25.0%
! TTGATATATAACGTGTTTCT+AGG + chr4_3:2203528-2203547 Msa0624230:intron 25.0%
! TCAAATAACCTTGAAATTCA+AGG + chr4_3:2203695-2203714 Msa0624230:CDS 25.0%
! ATGATGACTAAATTTGGTAA+CGG - chr4_3:2204059-2204078 None:intergenic 25.0%
! GAGACCTTAATATATCTTAA+AGG - chr4_3:2204146-2204165 None:intergenic 25.0%
! TATACATGATAAGTACAACA+TGG - chr4_3:2204199-2204218 None:intergenic 25.0%
! GTATAAGTTAGCAACAAAAA+AGG - chr4_3:2204370-2204389 None:intergenic 25.0%
!!! TACCATAACATTTTTTCCAT+AGG + chr4_3:2204387-2204406 Msa0624230:intron 25.0%
! TAAGTGTTTGTGATAATTTC+TGG + chr4_3:2204995-2205014 Msa0624230:three_prime_UTR 25.0%
! TATACAAAGTAAGATGGAAA+AGG - chr4_3:2205032-2205051 None:intergenic 25.0%
! ATGATGTTAACTGTATGAAT+AGG + chr4_3:2205232-2205251 Msa0624230:three_prime_UTR 25.0%
! GAAAAAATGCAATTCAAATC+CGG + chr4_3:2205295-2205314 Msa0624230:three_prime_UTR 25.0%
! AATGATATGATGTACAAATC+CGG - chr4_3:2205317-2205336 None:intergenic 25.0%
CGAAATATTAATGATATGGC+AGG - chr4_3:2202210-2202229 None:intergenic 30.0%
TACAAAATCGATGATATGAC+GGG - chr4_3:2202240-2202259 None:intergenic 30.0%
GTACAAAATCGATGATATGA+CGG - chr4_3:2202241-2202260 None:intergenic 30.0%
TTGACAAAAATGCTAAACCT+AGG + chr4_3:2202614-2202633 Msa0624230:intron 30.0%
!! TTCATGTTGATTTGATATGG+TGG - chr4_3:2202746-2202765 None:intergenic 30.0%
!!! TTTGAGAAATTTTAGGACAG+TGG - chr4_3:2202824-2202843 None:intergenic 30.0%
TATTCATTAGCAATCATCGT+TGG - chr4_3:2202898-2202917 None:intergenic 30.0%
!! ACACTTGTTTGATTTGTTCA+GGG - chr4_3:2202985-2203004 None:intergenic 30.0%
!! AACACTTGTTTGATTTGTTC+AGG - chr4_3:2202986-2203005 None:intergenic 30.0%
!! GTTGGATTAGTAAGTTATGA+GGG + chr4_3:2203064-2203083 Msa0624230:CDS 30.0%
! TCCATTTGCTAATCATATCA+TGG - chr4_3:2203264-2203283 None:intergenic 30.0%
TGATATGATTAGCAAATGGA+AGG + chr4_3:2203264-2203283 Msa0624230:CDS 30.0%
TTGATCTTATAAGATTGCAG+GGG + chr4_3:2203407-2203426 Msa0624230:CDS 30.0%
TCTTTGTCTTACCATTTCAT+CGG - chr4_3:2203457-2203476 None:intergenic 30.0%
AGAGATTTATGATTTAGTCG+AGG + chr4_3:2203595-2203614 Msa0624230:CDS 30.0%
GAGATTTATGATTTAGTCGA+GGG + chr4_3:2203596-2203615 Msa0624230:CDS 30.0%
GCCATCAATGATGATTTATT+AGG + chr4_3:2203659-2203678 Msa0624230:CDS 30.0%
GCCTAATAAATCATCATTGA+TGG - chr4_3:2203663-2203682 None:intergenic 30.0%
TGATTTATTAGGCTTACTGA+TGG + chr4_3:2203670-2203689 Msa0624230:CDS 30.0%
TTTCATGACCTTGAATTTCA+AGG - chr4_3:2203706-2203725 None:intergenic 30.0%
! ATCTTTGTTAGTTTGGACAA+TGG + chr4_3:2203808-2203827 Msa0624230:CDS 30.0%
! CAAGAAGTTTTGCAAGTTTT+TGG + chr4_3:2203872-2203891 Msa0624230:CDS 30.0%
AACCAAAATCCAAATCATGA+TGG + chr4_3:2203896-2203915 Msa0624230:CDS 30.0%
ACCAAAATCCAAATCATGAT+GGG + chr4_3:2203897-2203916 Msa0624230:CDS 30.0%
ATGTCATAAAAAAAGTCACG+TGG - chr4_3:2204113-2204132 None:intergenic 30.0%
!!! ACGTGACTTTTTTTATGACA+TGG + chr4_3:2204112-2204131 Msa0624230:intron 30.0%
ATATATTAAGGTCTCCACAA+TGG + chr4_3:2204151-2204170 Msa0624230:intron 30.0%
AACATAAAATATGTTGGGGA+CGG + chr4_3:2204273-2204292 Msa0624230:intron 30.0%
CACCTATGGAAAAAATGTTA+TGG - chr4_3:2204392-2204411 None:intergenic 30.0%
CAAAAGAGTTTAAACCAGAA+AGG + chr4_3:2204578-2204597 Msa0624230:CDS 30.0%
! AAATGAAACTTGACCTTTTG+TGG - chr4_3:2204626-2204645 None:intergenic 30.0%
!! CAAGTTTCATTTTTCCCATT+TGG + chr4_3:2204634-2204653 Msa0624230:CDS 30.0%
!! TTTCATTTTTCCCATTTGGA+TGG + chr4_3:2204638-2204657 Msa0624230:CDS 30.0%
!! TTCATTTTTCCCATTTGGAT+GGG + chr4_3:2204639-2204658 Msa0624230:CDS 30.0%
AAGTAGTGACATTACTACTT+TGG - chr4_3:2204707-2204726 None:intergenic 30.0%
! GATATTACAGTTTTTGCAGA+CGG - chr4_3:2204819-2204838 None:intergenic 30.0%
TAGTATTGCATGTGTATGTT+AGG + chr4_3:2204882-2204901 Msa0624230:three_prime_UTR 30.0%
!!! ATTCCCTCTCTTGTTTTATT+CGG - chr4_3:2204914-2204933 None:intergenic 30.0%
AATAAAACAAGAGAGGGAAT+GGG + chr4_3:2204914-2204933 Msa0624230:three_prime_UTR 30.0%
! AAAGTGCTTCAATCTTGTTT+CGG - chr4_3:2205209-2205228 None:intergenic 30.0%
!! AAACAAGATTGAAGCACTTT+TGG + chr4_3:2205209-2205228 Msa0624230:three_prime_UTR 30.0%
GAAGACATCAAACAATTGTA+TGG - chr4_3:2205258-2205277 None:intergenic 30.0%
!!! GCATTTTTTCTCAGTTTCAT+AGG - chr4_3:2205285-2205304 None:intergenic 30.0%
! TGAAAGGAACAAAGAGCTTT+TGG + chr4_3:2201520-2201539 Msa0624230:five_prime_UTR 35.0%
! ACAAAGAGCTTTTGGTGAAA+TGG + chr4_3:2201528-2201547 Msa0624230:five_prime_UTR 35.0%
CATAAGGAACACAACAAGTA+TGG + chr4_3:2201602-2201621 Msa0624230:exon 35.0%
TATGACTGTAAGAATCCAGA+AGG - chr4_3:2201646-2201665 None:intergenic 35.0%
! GGTATCAAATGGTTTGGATT+TGG - chr4_3:2201814-2201833 None:intergenic 35.0%
TGTACGAATGAAAAGATCTG+TGG - chr4_3:2201852-2201871 None:intergenic 35.0%
!! GCATATGTTGTTTCGAATCT+AGG + chr4_3:2201906-2201925 Msa0624230:intron 35.0%
ACAAAATCGATGATATGACG+GGG - chr4_3:2202239-2202258 None:intergenic 35.0%
TGTACAGTCAAAACTCATGA+AGG + chr4_3:2202256-2202275 Msa0624230:intron 35.0%
TCGGAATTCGCTAATATTAG+AGG + chr4_3:2202342-2202361 Msa0624230:intron 35.0%
CGGAATTCGCTAATATTAGA+GGG + chr4_3:2202343-2202362 Msa0624230:intron 35.0%
GGAATTCGCTAATATTAGAG+GGG + chr4_3:2202344-2202363 Msa0624230:intron 35.0%
AAAATGCTAACACGTCATTC+GGG - chr4_3:2202452-2202471 None:intergenic 35.0%
CAAAATGCTAACACGTCATT+CGG - chr4_3:2202453-2202472 None:intergenic 35.0%
! AATGACGTGTTAGCATTTTG+TGG + chr4_3:2202453-2202472 Msa0624230:intron 35.0%
TTGTTAGACACAATCATCGT+TGG - chr4_3:2202773-2202792 None:intergenic 35.0%
CTAGAATGATACTATGGGTT+TGG + chr4_3:2202853-2202872 Msa0624230:intron 35.0%
! TAGGCAAGAGTTCAGTTTTA+TGG + chr4_3:2202927-2202946 Msa0624230:intron 35.0%
!! AGGCAAGAGTTCAGTTTTAT+GGG + chr4_3:2202928-2202947 Msa0624230:intron 35.0%
!! AAGAGTTCAGTTTTATGGGA+AGG + chr4_3:2202932-2202951 Msa0624230:CDS 35.0%
AATACCAAAAGTGATCATCG+CGG + chr4_3:2202958-2202977 Msa0624230:CDS 35.0%
AATGGAATCGAACTTTGGTT+TGG - chr4_3:2203029-2203048 None:intergenic 35.0%
TTAGCAATGGAATCGAACTT+TGG - chr4_3:2203034-2203053 None:intergenic 35.0%
AACGAACAAACACTTAGCAA+TGG - chr4_3:2203047-2203066 None:intergenic 35.0%
ATTGCTAAGTGTTTGTTCGT+TGG + chr4_3:2203046-2203065 Msa0624230:CDS 35.0%
!! CGTTGGATTAGTAAGTTATG+AGG + chr4_3:2203063-2203082 Msa0624230:CDS 35.0%
GCCATGATATGATTAGCAAA+TGG + chr4_3:2203260-2203279 Msa0624230:CDS 35.0%
AATCATGTGAGATTGATGTC+CGG + chr4_3:2203305-2203324 Msa0624230:CDS 35.0%
!!! TCAAGTTTTGAATGAAAGGC+CGG - chr4_3:2203327-2203346 None:intergenic 35.0%
!!! CCAGTCAAGTTTTGAATGAA+AGG - chr4_3:2203331-2203350 None:intergenic 35.0%
CCTTTCATTCAAAACTTGAC+TGG + chr4_3:2203328-2203347 Msa0624230:CDS 35.0%
TACCTACAAGTTCCAACAAA+AGG + chr4_3:2203555-2203574 Msa0624230:CDS 35.0%
! ATCCTTTTGTTGGAACTTGT+AGG - chr4_3:2203560-2203579 None:intergenic 35.0%
AAGTTCCAACAAAAGGATGA+AGG + chr4_3:2203562-2203581 Msa0624230:CDS 35.0%
! GATTTCCTTCATCCTTTTGT+TGG - chr4_3:2203570-2203589 None:intergenic 35.0%
TAAAATACGAGAGAAAGCCA+TGG + chr4_3:2203625-2203644 Msa0624230:CDS 35.0%
TGTAAGCAATTCTACATTGC+AGG + chr4_3:2203770-2203789 Msa0624230:CDS 35.0%
!! AGTTTGGACAATGGTGTTAT+TGG + chr4_3:2203817-2203836 Msa0624230:CDS 35.0%
!! ACCCATCATGATTTGGATTT+TGG - chr4_3:2203901-2203920 None:intergenic 35.0%
TGACTTAACCCATCATGATT+TGG - chr4_3:2203908-2203927 None:intergenic 35.0%
! TTGTTGATATTGTGCCATTG+TGG - chr4_3:2204168-2204187 None:intergenic 35.0%
!!! ATTTTTTCCATAGGTGACCA+TGG + chr4_3:2204396-2204415 Msa0624230:intron 35.0%
TATAAAACCATGGTCACCTA+TGG - chr4_3:2204406-2204425 None:intergenic 35.0%
! TCATGGTGAACCAAAAGTAT+CGG - chr4_3:2204535-2204554 None:intergenic 35.0%
TTCACCATGACTGTGATATA+TGG + chr4_3:2204545-2204564 Msa0624230:CDS 35.0%
TCACCATGACTGTGATATAT+GGG + chr4_3:2204546-2204565 Msa0624230:CDS 35.0%
TTTAAACCAGAAAGGTTCTC+TGG + chr4_3:2204586-2204605 Msa0624230:CDS 35.0%
!! TCATTTTTCCCATTTGGATG+GGG + chr4_3:2204640-2204659 Msa0624230:CDS 35.0%
! CTTCCAATAAGGCAAAGTTT+TGG - chr4_3:2204684-2204703 None:intergenic 35.0%
! TACTACTTTGGCTTCCAATA+AGG - chr4_3:2204695-2204714 None:intergenic 35.0%
AAGCCGAATAAAACAAGAGA+GGG + chr4_3:2204908-2204927 Msa0624230:three_prime_UTR 35.0%
GAATAAAACAAGAGAGGGAA+TGG + chr4_3:2204913-2204932 Msa0624230:three_prime_UTR 35.0%
GCATTTGGTTGATTAGTACT+TGG + chr4_3:2204941-2204960 Msa0624230:three_prime_UTR 35.0%
TTGGTTGATTAGTACTTGGT+TGG + chr4_3:2204945-2204964 Msa0624230:three_prime_UTR 35.0%
TTGATTAGTACTTGGTTGGT+TGG + chr4_3:2204949-2204968 Msa0624230:three_prime_UTR 35.0%
TCTCAGAGAGTTAAGTTACA+AGG - chr4_3:2205068-2205087 None:intergenic 35.0%
! AAGTGCTTCAATCTTGTTTC+GGG - chr4_3:2205208-2205227 None:intergenic 35.0%
! ACAAGTTCTCCTTTTCTGTA+TGG + chr4_3:2205338-2205357 Msa0624230:three_prime_UTR 35.0%
CAAAGACATCCATACAGAAA+AGG - chr4_3:2205350-2205369 None:intergenic 35.0%
! ATGATGGAGAAGACGTATTG+TGG - chr4_3:2201563-2201582 None:intergenic 40.0%
AAGGAACACAACAAGTATGG+AGG + chr4_3:2201605-2201624 Msa0624230:exon 40.0%
! AGAAGCTTTTCCAACCTCTT+TGG - chr4_3:2201723-2201742 None:intergenic 40.0%
! GAAAAGCTTCTAAGAGCACA+AGG + chr4_3:2201732-2201751 Msa0624230:CDS 40.0%
!! GTTGGAGGTATCAAATGGTT+TGG - chr4_3:2201820-2201839 None:intergenic 40.0%
!! ACATCGTTGGAGGTATCAAA+TGG - chr4_3:2201825-2201844 None:intergenic 40.0%
CACCAAACTGTCCGAAAATA+CGG + chr4_3:2201870-2201889 Msa0624230:CDS 40.0%
! TACCGTATTTTCGGACAGTT+TGG - chr4_3:2201875-2201894 None:intergenic 40.0%
CAAAATCGATGATATGACGG+GGG - chr4_3:2202238-2202257 None:intergenic 40.0%
GATCCTCTACATCAATTGCA+CGG - chr4_3:2202547-2202566 None:intergenic 40.0%
AAATGCTAAACCTAGGAGTC+TGG + chr4_3:2202621-2202640 Msa0624230:intron 40.0%
TAAGTTATGAGGGTGACGAA+TGG + chr4_3:2203074-2203093 Msa0624230:CDS 40.0%
AAGTTATGAGGGTGACGAAT+GGG + chr4_3:2203075-2203094 Msa0624230:CDS 40.0%
! TGGCTGCTTTGAATAAATGC+CGG - chr4_3:2203244-2203263 None:intergenic 40.0%
!! GCGATTTCTAGAACAGCATT+TGG + chr4_3:2203355-2203374 Msa0624230:CDS 40.0%
ATACACGAAGTCCGATGAAA+TGG + chr4_3:2203443-2203462 Msa0624230:CDS 40.0%
CATGAAAAGAGTAAGACAGC+TGG + chr4_3:2203719-2203738 Msa0624230:CDS 40.0%
CCAAACTAACAAAGATGCAG+TGG - chr4_3:2203804-2203823 None:intergenic 40.0%
CCACTGCATCTTTGTTAGTT+TGG + chr4_3:2203801-2203820 Msa0624230:CDS 40.0%
! TATTGGCTAGGTTTCCTGAA+TGG + chr4_3:2203834-2203853 Msa0624230:CDS 40.0%
ACGTGAGGATGAAAGTTTGA+TGG - chr4_3:2204031-2204050 None:intergenic 40.0%
!! TTGGTAACGGAAAATACGTG+AGG - chr4_3:2204046-2204065 None:intergenic 40.0%
!!! GGTGACCATGGTTTTATATG+AGG + chr4_3:2204408-2204427 Msa0624230:intron 40.0%
CAGGACCTCATATAAAACCA+TGG - chr4_3:2204416-2204435 None:intergenic 40.0%
! CTGTTGGTGGATATAATCTC+AGG - chr4_3:2204435-2204454 None:intergenic 40.0%
CGAACTAAGAAAACTGTTGG+TGG - chr4_3:2204448-2204467 None:intergenic 40.0%
GCTCGAACTAAGAAAACTGT+TGG - chr4_3:2204451-2204470 None:intergenic 40.0%
TTATTCCTGCAGGTAGTGAT+AGG - chr4_3:2204501-2204520 None:intergenic 40.0%
ATGGCAACATTTATTCCTGC+AGG - chr4_3:2204511-2204530 None:intergenic 40.0%
! TGTTGCCATACCGATACTTT+TGG + chr4_3:2204522-2204541 Msa0624230:CDS 40.0%
!! GTGAACCAAAAGTATCGGTA+TGG - chr4_3:2204530-2204549 None:intergenic 40.0%
CACCATGACTGTGATATATG+GGG + chr4_3:2204547-2204566 Msa0624230:CDS 40.0%
! TTTTGGCCAATGCATGTTCT+AGG - chr4_3:2204667-2204686 None:intergenic 40.0%
TGGCCAAAACTTTGCCTTAT+TGG + chr4_3:2204678-2204697 Msa0624230:CDS 40.0%
CATGCTTATAGTCTGCAGAA+AGG - chr4_3:2204750-2204769 None:intergenic 40.0%
TGCAAAGAAAGGATAGCAGT+GGG - chr4_3:2204775-2204794 None:intergenic 40.0%
CTTTCTTTGCAGCCAAAACA+CGG + chr4_3:2204784-2204803 Msa0624230:CDS 40.0%
TTTCTTTGCAGCCAAAACAC+GGG + chr4_3:2204785-2204804 Msa0624230:CDS 40.0%
CAAGCCGAATAAAACAAGAG+AGG + chr4_3:2204907-2204926 Msa0624230:three_prime_UTR 40.0%
TCTGATACCAGCTTATTGGT+TGG - chr4_3:2205151-2205170 None:intergenic 40.0%
TGCATCTGATACCAGCTTAT+TGG - chr4_3:2205155-2205174 None:intergenic 40.0%
!! TAGCAGAGAGCATCTTTCTA+GGG - chr4_3:2205376-2205395 None:intergenic 40.0%
TAGAAAGATGCTCTCTGCTA+GGG + chr4_3:2205376-2205395 Msa0624230:three_prime_UTR 40.0%
GTAAGAATCCAGAAGGTAGC+TGG - chr4_3:2201639-2201658 None:intergenic 45.0%
TCCAGAAGCTGAATTCCTTG+TGG + chr4_3:2201691-2201710 Msa0624230:CDS 45.0%
ACCACAAGGAATTCAGCTTC+TGG - chr4_3:2201695-2201714 None:intergenic 45.0%
! CTAAGAGCACAAGGTCTTCA+AGG + chr4_3:2201741-2201760 Msa0624230:CDS 45.0%
TAACACGTCATTCGGGAAAC+TGG - chr4_3:2202445-2202464 None:intergenic 45.0%
TTGCCGTGCAATTGATGTAG+AGG + chr4_3:2202541-2202560 Msa0624230:intron 45.0%
GTTTCGAAATCCAGACTCCT+AGG - chr4_3:2202634-2202653 None:intergenic 45.0%
GGAGTCTGGATTTCGAAACA+AGG + chr4_3:2202635-2202654 Msa0624230:intron 45.0%
GACTTTCAAGCAACCACACT+TGG + chr4_3:2202657-2202676 Msa0624230:intron 45.0%
GCAACTAGACGAACATGACA+TGG + chr4_3:2202679-2202698 Msa0624230:intron 45.0%
CTAGACGAACATGACATGGT+TGG + chr4_3:2202683-2202702 Msa0624230:intron 45.0%
! AGTGGTTTGCAACTCTTTCG+AGG - chr4_3:2202806-2202825 None:intergenic 45.0%
!! GGACAATGGTGTTATTGGCT+AGG + chr4_3:2203822-2203841 Msa0624230:CDS 45.0%
CACCCCATATATCACAGTCA+TGG - chr4_3:2204552-2204571 None:intergenic 45.0%
AAACCAGAAAGGTTCTCTGG+AGG + chr4_3:2204589-2204608 Msa0624230:CDS 45.0%
ATTCCTCCAGAGAACCTTTC+TGG - chr4_3:2204595-2204614 None:intergenic 45.0%
! GTTCTCTGGAGGAATTGCAA+AGG + chr4_3:2204600-2204619 Msa0624230:CDS 45.0%
GGAATTGCAAAGGCCACAAA+AGG + chr4_3:2204610-2204629 Msa0624230:CDS 45.0%
!! TTCTAGGACCCCATCCAAAT+GGG - chr4_3:2204651-2204670 None:intergenic 45.0%
CTGCAAAGAAAGGATAGCAG+TGG - chr4_3:2204776-2204795 None:intergenic 45.0%
!!! CGTGTTTTGGCTGCAAAGAA+AGG - chr4_3:2204786-2204805 None:intergenic 45.0%
TTCTTTGCAGCCAAAACACG+GGG + chr4_3:2204786-2204805 Msa0624230:CDS 45.0%
AACAAGAGAGGGAATGGGAT+TGG + chr4_3:2204919-2204938 Msa0624230:three_prime_UTR 45.0%
! TTGGTTGGTTGGTCAAGACT+AGG + chr4_3:2204960-2204979 Msa0624230:three_prime_UTR 45.0%
GCAAATGCCAACCAATAAGC+TGG + chr4_3:2205141-2205160 Msa0624230:three_prime_UTR 45.0%
!! AGCAGAGAGCATCTTTCTAG+GGG - chr4_3:2205375-2205394 None:intergenic 45.0%
!! CTAGCAGAGAGCATCTTTCT+AGG - chr4_3:2205377-2205396 None:intergenic 45.0%
CTAGAAAGATGCTCTCTGCT+AGG + chr4_3:2205375-2205394 Msa0624230:three_prime_UTR 45.0%
TGATCAGCTGTTAGTTGCTC+TGG + chr4_3:2205427-2205446 Msa0624230:three_prime_UTR 45.0%
CACTTTCACCAGCTACCTTC+TGG + chr4_3:2201628-2201647 Msa0624230:CDS 50.0%
! AGCTTCTGGAAAGCCCATAG+AGG - chr4_3:2201681-2201700 None:intergenic 50.0%
CCTCTTTGGTCTCAACCACA+AGG - chr4_3:2201709-2201728 None:intergenic 50.0%
CCTTGTGGTTGAGACCAAAG+AGG + chr4_3:2201706-2201725 Msa0624230:CDS 50.0%
GTGGTTGAGACCAAAGAGGT+TGG + chr4_3:2201710-2201729 Msa0624230:CDS 50.0%
ATTCGGGAAACTGGTCGTGA+AGG - chr4_3:2202436-2202455 None:intergenic 50.0%
GTTCGTCTAGTTGCCAAGTG+TGG - chr4_3:2202673-2202692 None:intergenic 50.0%
TTTGGCAGCAGCTATGTAGC+AGG + chr4_3:2203373-2203392 Msa0624230:CDS 50.0%
TTGGCAGCAGCTATGTAGCA+GGG + chr4_3:2203374-2203393 Msa0624230:CDS 50.0%
CGAGAGAAAGCCATGGACAA+TGG + chr4_3:2203632-2203651 Msa0624230:CDS 50.0%
GATGGCTTCTCCATTGTCCA+TGG - chr4_3:2203645-2203664 None:intergenic 50.0%
CTTGCACGTTCTTGCCATTC+AGG - chr4_3:2203851-2203870 None:intergenic 50.0%
CTGAATGGCAAGAACGTGCA+AGG + chr4_3:2203849-2203868 Msa0624230:CDS 50.0%
GGAAACCTATCACTACCTGC+AGG + chr4_3:2204493-2204512 Msa0624230:CDS 50.0%
!! GTTCTAGGACCCCATCCAAA+TGG - chr4_3:2204652-2204671 None:intergenic 50.0%
TGGGGTCCTAGAACATGCAT+TGG + chr4_3:2204658-2204677 Msa0624230:CDS 50.0%
! GAGGGAATGGGATTGGCATT+TGG + chr4_3:2204926-2204945 Msa0624230:three_prime_UTR 50.0%
TGATCAGCCAGGAAACCCTA+GGG - chr4_3:2205413-2205432 None:intergenic 50.0%
CAACTAACAGCTGATCAGCC+AGG - chr4_3:2205424-2205443 None:intergenic 50.0%
GAGGAGCTAAAAACCTGAGG+AGG - chr4_3:2205463-2205482 None:intergenic 50.0%
GAGGAGGAGCTAAAAACCTG+AGG - chr4_3:2205466-2205485 None:intergenic 50.0%
ATCACAGAGATGAGGTGAGG+AGG - chr4_3:2205482-2205501 None:intergenic 50.0%
GATCTGTGGCGCAACATCGT+TGG - chr4_3:2201838-2201857 None:intergenic 55.0%
! GGGTCCGCGATGATCACTTT+TGG - chr4_3:2202965-2202984 None:intergenic 55.0%
! CGGATCTTAGCCCCGTGTTT+TGG - chr4_3:2204799-2204818 None:intergenic 55.0%
GATCAGCCAGGAAACCCTAG+GGG - chr4_3:2205412-2205431 None:intergenic 55.0%
CTGATCAGCCAGGAAACCCT+AGG - chr4_3:2205414-2205433 None:intergenic 55.0%
CTGTGGCGCAACATCGTTGG+AGG - chr4_3:2201835-2201854 None:intergenic 60.0%
TAGGGTTTCGCCCTTCCCCT+AGG + chr4_3:2205394-2205413 Msa0624230:three_prime_UTR 60.0%
AGGGTTTCGCCCTTCCCCTA+GGG + chr4_3:2205395-2205414 Msa0624230:three_prime_UTR 60.0%
GCCAGGAAACCCTAGGGGAA+GGG - chr4_3:2205407-2205426 None:intergenic 60.0%
AGCCAGGAAACCCTAGGGGA+AGG - chr4_3:2205408-2205427 None:intergenic 60.0%
GCCCTTCCCCTAGGGTTTCC+TGG + chr4_3:2205403-2205422 Msa0624230:three_prime_UTR 65.0%
TGGTACGCTCGCTCCTCCTC+AGG + chr4_3:2205447-2205466 Msa0624230:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 2201433 2205503 2201433 ID=Msa0624230;Name=Msa0624230
chr4_3 mRNA 2201433 2205503 2201433 ID=Msa0624230-mRNA-1;Parent=Msa0624230;Name=Msa0624230-mRNA-1;_AED=0.33;_eAED=0.33;_QI=188|1|1|1|0.8|0.66|6|649|511
chr4_3 exon 2201433 2201891 2201433 ID=Msa0624230-mRNA-1:exon:570;Parent=Msa0624230-mRNA-1
chr4_3 exon 2202930 2203147 2202930 ID=Msa0624230-mRNA-1:exon:571;Parent=Msa0624230-mRNA-1
chr4_3 exon 2203232 2203464 2203232 ID=Msa0624230-mRNA-1:exon:572;Parent=Msa0624230-mRNA-1
chr4_3 exon 2203550 2203937 2203550 ID=Msa0624230-mRNA-1:exon:573;Parent=Msa0624230-mRNA-1
chr4_3 exon 2204409 2205456 2204409 ID=Msa0624230-mRNA-1:exon:574;Parent=Msa0624230-mRNA-1
chr4_3 exon 2205477 2205503 2205477 ID=Msa0624230-mRNA-1:exon:575;Parent=Msa0624230-mRNA-1
chr4_3 five_prime_UTR 2201433 2201620 2201433 ID=Msa0624230-mRNA-1:five_prime_utr;Parent=Msa0624230-mRNA-1
chr4_3 CDS 2201621 2201891 2201621 ID=Msa0624230-mRNA-1:cds;Parent=Msa0624230-mRNA-1
chr4_3 CDS 2202930 2203147 2202930 ID=Msa0624230-mRNA-1:cds;Parent=Msa0624230-mRNA-1
chr4_3 CDS 2203232 2203464 2203232 ID=Msa0624230-mRNA-1:cds;Parent=Msa0624230-mRNA-1
chr4_3 CDS 2203550 2203937 2203550 ID=Msa0624230-mRNA-1:cds;Parent=Msa0624230-mRNA-1
chr4_3 CDS 2204409 2204834 2204409 ID=Msa0624230-mRNA-1:cds;Parent=Msa0624230-mRNA-1
chr4_3 three_prime_UTR 2204835 2205456 2204835 ID=Msa0624230-mRNA-1:three_prime_utr;Parent=Msa0624230-mRNA-1
chr4_3 three_prime_UTR 2205477 2205503 2205477 ID=Msa0624230-mRNA-1:three_prime_utr;Parent=Msa0624230-mRNA-1
Gene Sequence

>Msa0624230

ATGGAGGCACTTTCACCAGCTACCTTCTGGATTCTTACAGTCATAATTGCTATTATTCCTCTATGGGCTTTCCAGAAGCTGAATTCCTTGTGGTTGAGACCAAAGAGGTTGGAAAAGCTTCTAAGAGCACAAGGTCTTCAAGGAGATTCATACAAGTTGTTCAACTCAAAGTTGAAGATGCAACATGAAGCCAAATCCAAACCATTTGATACCTCCAACGATGTTGCGCCACAGATCTTTTCATTCGTACACCAAACTGTCCGAAAATACGGCAAGAGTTCAGTTTTATGGGAAGGTAGAATACCAAAAGTGATCATCGCGGACCCTGAACAAATCAAACAAGTGTTTAACAAGATGCATGACTTCACCAAACCAAAGTTCGATTCCATTGCTAAGTGTTTGTTCGTTGGATTAGTAAGTTATGAGGGTGACGAATGGGCAAAACATCGAAAGATTATAAACCCTGCATTTCACATTGATAAATTGAGAAATATGCTACCGGCATTTATTCAAAGCAGCCATGATATGATTAGCAAATGGAAGGAAATGTTGACATCAGATGAATCATGTGAGATTGATGTCCGGCCTTTCATTCAAAACTTGACTGGTGATGCGATTTCTAGAACAGCATTTGGCAGCAGCTATGTAGCAGGGTCAAAAATATTTGATCTTATAAGATTGCAGGGGCATATTCTATTTAATACACGAAGTCCGATGAAATGGTTTCTACCTACAAGTTCCAACAAAAGGATGAAGGAAATCGATAGAGAGATTTATGATTTAGTCGAGGGTATCATTAAAATACGAGAGAAAGCCATGGACAATGGAGAAGCCATCAATGATGATTTATTAGGCTTACTGATGGAATCAAATAACCTTGAAATTCAAGGTCATGAAAAGAGTAAGACAGCTGGAATGACATATGATGAAGTAGTTAAAGAATGTAAGCAATTCTACATTGCAGGACAAGAGACCACTGCATCTTTGTTAGTTTGGACAATGGTGTTATTGGCTAGGTTTCCTGAATGGCAAGAACGTGCAAGGCAAGAAGTTTTGCAAGTTTTTGGAAACCAAAATCCAAATCATGATGGGTTAAGTCAACTTAAAATTGTGACCATGGTTTTATATGAGGTCCTGAGATTATATCCACCAACAGTTTTCTTAGTTCGAGCTGTAAAAAAAAATTTAAAACTTGGAAACCTATCACTACCTGCAGGAATAAATGTTGCCATACCGATACTTTTGGTTCACCATGACTGTGATATATGGGGTGATGATGCAAAAGAGTTTAAACCAGAAAGGTTCTCTGGAGGAATTGCAAAGGCCACAAAAGGTCAAGTTTCATTTTTCCCATTTGGATGGGGTCCTAGAACATGCATTGGCCAAAACTTTGCCTTATTGGAAGCCAAAGTAGTAATGTCACTACTTCTGCAAAATTTCTCATTTGACCTTTCTGCAGACTATAAGCATGATCCCACTGCTATCCTTTCTTTGCAGCCAAAACACGGGGCTAAGATCCGTCTGCAAAAACTGTAA
Protein sequence

>Msa0624230

MEALSPATFWILTVIIAIIPLWAFQKLNSLWLRPKRLEKLLRAQGLQGDSYKLFNSKLKMQHEAKSKPFDTSNDVAPQIFSFVHQTVRKYGKSSVLWEGRIPKVIIADPEQIKQVFNKMHDFTKPKFDSIAKCLFVGLVSYEGDEWAKHRKIINPAFHIDKLRNMLPAFIQSSHDMISKWKEMLTSDESCEIDVRPFIQNLTGDAISRTAFGSSYVAGSKIFDLIRLQGHILFNTRSPMKWFLPTSSNKRMKEIDREIYDLVEGIIKIREKAMDNGEAINDDLLGLLMESNNLEIQGHEKSKTAGMTYDEVVKECKQFYIAGQETTASLLVWTMVLLARFPEWQERARQEVLQVFGNQNPNHDGLSQLKIVTMVLYEVLRLYPPTVFLVRAVKKNLKLGNLSLPAGINVAIPILLVHHDCDIWGDDAKEFKPERFSGGIAKATKGQVSFFPFGWGPRTCIGQNFALLEAKVVMSLLLQNFSFDLSADYKHDPTAILSLQPKHGAKIRLQKL*